Psyllid ID: psy1025

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFLVCSGGGIPAGASSPFYRATTNNHRVHRTLNTELKYSPEMM
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHccccccccccccccccccccccHHHcccccccccccccccHHHHcccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHcccccccccHHHHccHHHccccHHHHHHcccccccccccccccccccccHHHcccccccccccccccHHHHHHHcccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MKVLRKASIVRNQKDTAHTKAERNIleavkppftadnRKKTIEKILRgklilppyltpDARELIRKLLKRQVAQrlgsgpndgeavrvhpffrsinwsdvlsrkleppfkpsltgeddvsqfdtkftrqtpvdspdesllsesaNLVFQGFtyvapsvleemhhdkprivkarsprketssynyylkphhhhglpqqsgmsgghhvdqqrsgggdpflvcsgggipagasspfyrattnnhrvhrtlntelkyspemm
Flexible Loop (DISEMBL)
mkvlrkasivrnqkdtahtkaernileavkppftadnrkKTIEKilrgklilppylTPDARELIRKLLKRQVAQrlgsgpndgeavrvHPFFRSINWSDVLSRKLEPpfkpsltgeddvsqfdTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPsvleemhhdkprivkarsprkeTSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFLVCSGGGIPAGASSPFyrattnnhrvhrtlntelkyspemm
Low Complexity Region (SEG)
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFLVCsgggipagasspFYRATTNNHRVHRTLNTELKYSPEMM
Disordered region (IsUnstruct)
**************************************KKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL*******EAVRVHPFFRSINWSDVL******************************************ANLVFQGFTYVAPSVL*********************************************************FLVCSGGGI*******FY************************
Disordered Region (DISOPRED)
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLE*************************************************************************************TLNTELKYSP***
Disordered Region (DISEMBL)
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTR**********LLSESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHH******************SGGGDPFLVCSGGGIPAGASSPFYRATTNNHRVHRTLNTELKYSPEMM
Disordered Region (DISPRO)
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLEEMHH******************************************************************************V***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFLVCSGGGIPAGASSPFYRATTNNHRVHRTLNTELKYSPEMM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q6TJY3	527	Ribosomal protein S6 kina	yes	N/A	0.585	0.286	0.662	4e-52
P67999	525	Ribosomal protein S6 kina	yes	N/A	0.585	0.287	0.662	4e-52
Q8BSK8	525	Ribosomal protein S6 kina	yes	N/A	0.585	0.287	0.662	4e-52
P23443	525	Ribosomal protein S6 kina	yes	N/A	0.585	0.287	0.662	4e-52
P67998	525	Ribosomal protein S6 kina	yes	N/A	0.585	0.287	0.662	4e-52
Q9UBS0	482	Ribosomal protein S6 kina	no	N/A	0.585	0.313	0.629	1e-51
Q9Z1M4	485	Ribosomal protein S6 kina	no	N/A	0.585	0.311	0.629	5e-51
P10666	629	Ribosomal protein S6 kina	N/A	N/A	0.5	0.205	0.461	3e-27
P18652	752	Ribosomal protein S6 kina	no	N/A	0.5	0.171	0.430	3e-26
Q63531	735	Ribosomal protein S6 kina	no	N/A	0.534	0.187	0.418	5e-26

>sp|Q6TJY3|KS6B1_BOVIN Ribosomal protein S6 kinase beta-1 OS=Bos taurus GN=RPS6KB1 PE=2 SV=1

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct: 351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSALSESANQVFLG 410

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVLE +        K RSPR+   S
Sbjct: 411 FTYVAPSVLESVKEKFSFEPKIRSPRRFIGS 441

Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial RMP leading to dissociation of a RMP:PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|P67999|KS6B1_RAT Ribosomal protein S6 kinase beta-1 OS=Rattus norvegicus GN=Rps6kb1 PE=1 SV=1

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct: 351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVLE +        K RSPR+   S
Sbjct: 411 FTYVAPSVLESVKEKFSFEPKIRSPRRFIGS 441

Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial RMP leading to dissociation of a RMP:PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BSK8|KS6B1_MOUSE Ribosomal protein S6 kinase beta-1 OS=Mus musculus GN=Rps6kb1 PE=1 SV=2

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct: 351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVLE +        K RSPR+   S
Sbjct: 411 FTYVAPSVLESVKEKFSFEPKIRSPRRFIGS 441

Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial RMP leading to dissociation of a RMP:PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P23443|KS6B1_HUMAN Ribosomal protein S6 kinase beta-1 OS=Homo sapiens GN=RPS6KB1 PE=1 SV=2

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct: 351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVLE +        K RSPR+   S
Sbjct: 411 FTYVAPSVLESVKEKFSFEPKIRSPRRFIGS 441

Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial URI1 leading to dissociation of a URI1-PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P67998|KS6B1_RABIT Ribosomal protein S6 kinase beta-1 OS=Oryctolagus cuniculus GN=RPS6KB1 PE=2 SV=1

 Score =  204 bits (519), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct: 351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVLE +        K RSPR+   S
Sbjct: 411 FTYVAPSVLESVKEKFSFEPKIRSPRRFIGS 441

Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial RMP leading to dissociation of a RMP:PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UBS0|KS6B2_HUMAN Ribosomal protein S6 kinase beta-2 OS=Homo sapiens GN=RPS6KB2 PE=1 SV=2

 Score =  202 bits (515), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 95/151 (62%), Positives = 119/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKT++KI+RGKL LPPYLTPDAR+L++K LKR  +QR+G GP D   V+ HP
Sbjct: 267 PPFTAENRKKTMDKIIRGKLALPPYLTPDARDLVKKFLKRNPSQRIGGGPGDAADVQRHP 326

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR +NW D+L+ +++PPF+P L  E+DVSQFDT+FTRQTPVDSPD++ LSESAN  F G
Sbjct: 327 FFRHMNWDDLLAWRVDPPFRPCLQSEEDVSQFDTRFTRQTPVDSPDDTALSESANQAFLG 386

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVL+ +        K RSPR+  SS
Sbjct: 387 FTYVAPSVLDSIKEGFSFQPKLRSPRRLNSS 417

Phosphorylates specifically ribosomal protein S6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z1M4|KS6B2_MOUSE Ribosomal protein S6 kinase beta-2 OS=Mus musculus GN=Rps6kb2 PE=1 SV=1

 Score =  201 bits (511), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/151 (62%), Positives = 118/151 (78%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKT++KI++GKL+LPPYLTPDAR+L +K LKR   QR+G G  D   V+ HP
Sbjct: 267 PPFTAENRKKTMDKIIKGKLVLPPYLTPDARDLAKKFLKRNPTQRIGGGLGDAADVQRHP 326

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR INW D+L+R+++PPF+PSL  E+DVSQFD +FTRQTPVDSPD++ LSESAN  F G
Sbjct: 327 FFRHINWDDLLARRVDPPFRPSLQSEEDVSQFDARFTRQTPVDSPDDTALSESANQAFLG 386

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
           FTYVAPSVL+ +        K RSPR+  SS
Sbjct: 387 FTYVAPSVLDSIKEGFSFQPKLRSPRRLNSS 417

Phosphorylates specifically ribosomal protein S6.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P10666|KS6AB_XENLA Ribosomal protein S6 kinase 2 beta OS=Xenopus laevis PE=2 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+ +A+ L+R L KR    RLGSG    E ++ HPF
Sbjct: 261 PFQGKDRKETMTLILKAKLGMPQFLSNEAQSLLRALFKRNATNRLGSGVEGAEELKRHPF 320

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
           F +I+W+ +  R+L PPFKPS+T  DD   FDT+FT +TP DSP     S  A+ +F+GF
Sbjct: 321 FSTIDWNKLYRRELSPPFKPSVTQPDDTYYFDTEFTSRTPKDSPGIP-PSAGAHQLFRGF 379

Query: 152 TYVAPSVLEE 161
           ++VAP ++EE
Sbjct: 380 SFVAPVLVEE 389

Serine/threonine kinase that may play a role in mediating the growth-factor and stress induced activation of transcription.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P18652|KS6AA_CHICK Ribosomal protein S6 kinase 2 alpha OS=Gallus gallus GN=RPS6KA PE=2 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 89/130 (68%), Gaps = 1/130 (0%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+ +A+ L+R L KR  A RLGSGP+  E ++ HPF
Sbjct: 279 PFQGKDRKETMTLILKAKLGMPQFLSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPF 338

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
           + +I+W+ +  R+++PPFKP++   DD   FDT+FT +TP DSP     S  A+ +F+GF
Sbjct: 339 YSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGIP-PSAGAHQLFRGF 397

Query: 152 TYVAPSVLEE 161
           ++VA  ++E+
Sbjct: 398 SFVATGLMED 407

Serine/threonine kinase that may play a role in mediating the growth-factor and stress induced activation of transcription.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q63531|KS6A1_RAT Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1 PE=1 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 93/141 (65%), Gaps = 3/141 (2%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+ +A+ L+R L KR  A RLGSGP+  E ++ H F
Sbjct: 261 PFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHIF 320

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
           + +I+W+ +  R+++PPFKP++   DD   FDT+FT +TP DSP     S  A+ +F+GF
Sbjct: 321 YSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDTEFTSRTPRDSPGIP-PSAGAHQLFRGF 379

Query: 152 TYVAPSVLEEMHHDKPRIVKA 172
           ++VA  ++E+    KPR  +A
Sbjct: 380 SFVATGLMED--DSKPRATQA 398

Serine/threonine-protein kinase that acts downstream of ERK (MAPK1/ERK2 and MAPK3/ERK1) signaling and mediates mitogenic and stress-induced activation of the transcription factors CREB1, ETV1/ER81 and NR4A1/NUR77, regulates translation through RPS6 and EIF4B phosphorylation, and mediates cellular proliferation, survival, and differentiation by modulating mTOR signaling and repressing pro-apoptotic function of BAD and DAPK1. In fibroblast, is required for EGF-stimulated phosphorylation of CREB1, which results in the subsequent transcriptional activation of several immediate-early genes. In response to mitogenic stimulation (EGF and PMA), phosphorylates and activates NR4A1/NUR77 and ETV1/ER81 transcription factors and the cofactor CREBBP. Upon insulin-derived signal, acts indirectly on the transcription regulation of several genes by phosphorylating GSK3B at 'Ser-9' and inhibiting its activity. Phosphorylates RPS6 in response to serum or EGF via an mTOR-independent mechanism and promotes translation initiation by facilitating assembly of the preinitiation complex. In response to insulin, phosphorylates EIF4B, enhancing EIF4B affinity for the EIF3 complex and stimulating cap-dependent translation. Is involved in the mTOR nutrient-sensing pathway by directly phosphorylating TSC2 at 'Ser-1798', which potently inhibits TSC2 ability to suppress mTOR signaling, and mediates phosphorylation of RPTOR, which regulates mTORC1 activity and may promote rapamycin-sensitive signaling independently of the PI3K/AKT pathway. Mediates cell survival by phosphorylating the pro-apoptotic proteins BAD and DAPK1 and suppressing their pro-apoptotic function. Promotes the survival of hepatic stellate cells by phosphorylating CEBPB in response to the hepatotoxin carbon tetrachloride (CCl4) (By similarity). Is involved in cell cycle regulation by phosphorylating the CDK inhibitor CDKN1B, which promotes CDKN1B association with 14-3-3 proteins and prevents its translocation to the nucleus and inhibition of G1 progression.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
310769193	311	P70S6K [Bombyx mori]	0.713	0.591	0.696	1e-67
12060812	484	p70 ribosomal protein S6 kinase [Artemia	0.569	0.303	0.771	3e-62
242008699	451	RAC protein kinase DRAC-PK85, putative [	0.565	0.323	0.802	4e-61
321475078	386	S6 kinase-like protein [Daphnia pulex]	0.562	0.375	0.748	1e-59
340712000	456	PREDICTED: LOW QUALITY PROTEIN: ribosoma	0.631	0.357	0.645	5e-59
388261310	372	70 kDa ribosomal protein S6 kinase, part	0.550	0.381	0.765	1e-58
157109407	508	ribosomal protein S6 kinase [Aedes aegyp	0.562	0.285	0.721	2e-58
328778784	456	PREDICTED: ribosomal protein S6 kinase b	0.631	0.357	0.645	3e-58
170033167	721	ribosomal protein S6 kinase [Culex quinq	0.562	0.201	0.714	6e-58
156544249	454	PREDICTED: ribosomal protein S6 kinase b	0.635	0.361	0.627	6e-58

>gi|310769193|gb|ADP21244.1| P70S6K [Bombyx mori]

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 131/188 (69%), Positives = 156/188 (82%), Gaps = 4/188 (2%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDA 60
           MKVL+KASIVRNQKDTAHTKAERNILEAVKPP+T DNR KTIEKIL+GKL+LP YLT DA
Sbjct: 105 MKVLKKASIVRNQKDTAHTKAERNILEAVKPPYTGDNRTKTIEKILKGKLMLPAYLTQDA 164

Query: 61  RELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVS 120
           R+LIR+L+KR   QRLG+      AVR H FF+ ++W DV +R+LEPP KP LT EDDVS
Sbjct: 165 RDLIRRLMKRSETQRLGA--AGAAAVRGHAFFKHVHWDDVFARRLEPPIKPRLTSEDDVS 222

Query: 121 QFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETS 180
           QFDT+FT QTP+DSPDES LSESANL+FQGFTYVAPSV++E+H  KPR++ ARSPR+   
Sbjct: 223 QFDTRFTLQTPIDSPDESTLSESANLMFQGFTYVAPSVMDEIH--KPRVITARSPRRPRP 280

Query: 181 SYNYYLKP 188
            +N+ + P
Sbjct: 281 HHNFTIPP 288

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|12060812|gb|AAG48248.1|AF282407_1 p70 ribosomal protein S6 kinase [Artemia franciscana]

 Score =  244 bits (623), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 115/149 (77%), Positives = 136/149 (91%), Gaps = 2/149 (1%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKTIEKIL+GKL LPPYL+PDAR+LIRKLLKR V QRLGSGP DGE+++ HP
Sbjct: 276 PPFTAENRKKTIEKILKGKLNLPPYLSPDARDLIRKLLKRTVNQRLGSGPEDGESLKDHP 335

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR +NW+DVL R+++PPFKP+LT EDDVSQFDT+FT+QTPVDSPDES LSESANLVFQG
Sbjct: 336 FFRLVNWNDVLMRRVDPPFKPALTSEDDVSQFDTRFTKQTPVDSPDESTLSESANLVFQG 395

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKET 179
           FTYVAPSVLE++  ++P ++KARSPRK T
Sbjct: 396 FTYVAPSVLEDV--NRPHVIKARSPRKPT 422

Source: Artemia franciscana

Species: Artemia franciscana

Genus: Artemia

Family: Artemiidae

Order: Anostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008699|ref|XP_002425139.1| RAC protein kinase DRAC-PK85, putative [Pediculus humanus corporis] gi|212508820|gb|EEB12401.1| RAC protein kinase DRAC-PK85, putative [Pediculus humanus corporis]

 Score =  240 bits (613), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 118/147 (80%), Positives = 128/147 (87%), Gaps = 1/147 (0%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKTIE IL+GKL LPPY+TPDAR+LIRKLLKRQV QRLGSG  DG+A+R H 
Sbjct: 266 PPFTAENRKKTIEIILKGKLNLPPYVTPDARDLIRKLLKRQVNQRLGSGAEDGKAIRRHA 325

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+ INWSDV+SRKLEPPFKP LT EDDVSQFDTKFT+QTP DSPD+  LSESAN VFQG
Sbjct: 326 FFKHINWSDVISRKLEPPFKPCLTSEDDVSQFDTKFTKQTPFDSPDDYTLSESANRVFQG 385

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
           FTYVAPSVLEEM    P IVKARSPRK
Sbjct: 386 FTYVAPSVLEEMSR-PPHIVKARSPRK 411

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321475078|gb|EFX86042.1| S6 kinase-like protein [Daphnia pulex]

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 110/147 (74%), Positives = 130/147 (88%), Gaps = 2/147 (1%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKTIEKIL+GKL LPPYLTPDAR+LIR+LLKR V  RLGS   DGE VR+HP
Sbjct: 229 PPFTAENRKKTIEKILKGKLNLPPYLTPDARDLIRRLLKRGVVSRLGSTVADGEPVRMHP 288

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF++I+W++V  R+LEPPFKP L   DDVSQFDT+FT+QTP+DSPD+S LSESAN+VFQG
Sbjct: 289 FFKTIDWNEVACRRLEPPFKPCLASADDVSQFDTRFTKQTPIDSPDDSTLSESANMVFQG 348

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
           FTYVAPSVLEEMH  +P+++KARSPRK
Sbjct: 349 FTYVAPSVLEEMH--RPQVIKARSPRK 373

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712000|ref|XP_003394553.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal protein S6 kinase beta-1-like [Bombus terrestris] gi|350402479|ref|XP_003486501.1| PREDICTED: ribosomal protein S6 kinase beta-1-like [Bombus impatiens]

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 138/175 (78%), Gaps = 12/175 (6%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT+DNRKKTIEKILRGKL LP YLTPD+R+LIRKLLKRQVAQRLGSGP+D E ++ H 
Sbjct: 269 PPFTSDNRKKTIEKILRGKLNLPQYLTPDSRDLIRKLLKRQVAQRLGSGPSDAEQIKSHQ 328

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+ INW+DV+SRKLEPPF+P+LT EDDVSQFD KFT   P+DSP E  LSESAN VFQG
Sbjct: 329 FFKHINWNDVISRKLEPPFRPTLTSEDDVSQFDKKFTTSAPIDSPAEYTLSESANRVFQG 388

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS-----------YNYYLKPHHHHGL 194
           FTYVAPS+LE+M + +PR++ ARSPR+               +N +++ H H+G+
Sbjct: 389 FTYVAPSILEDM-YSQPRVINARSPRRGNMRGFSPRGTHFHLHNNHVQNHRHNGV 442

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|388261310|gb|ADM87427.3| 70 kDa ribosomal protein S6 kinase, partial [Gecarcinus lateralis]

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/145 (76%), Positives = 132/145 (91%), Gaps = 3/145 (2%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKTIEKIL+GKL LPPYLTPDAR+LIRKLLKRQV+QRLGSGP+DGE ++ H 
Sbjct: 231 PPFTAENRKKTIEKILKGKLNLPPYLTPDARDLIRKLLKRQVSQRLGSGPDDGEPIKRHL 290

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+ INW DV++RKL+PPFKP L+G+DDVSQFD+KFT+QTPVDSPD+ +LSESAN+VF+G
Sbjct: 291 FFKLINW-DVINRKLDPPFKPVLSGDDDVSQFDSKFTKQTPVDSPDDHMLSESANMVFEG 349

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSP 175
           FTYVAPSVLEEM   +P +VKA SP
Sbjct: 350 FTYVAPSVLEEMA--RPSVVKAESP 372

Source: Gecarcinus lateralis

Species: Gecarcinus lateralis

Genus: Gecarcinus

Family: Gecarcinidae

Order: Decapoda

Class: Malacostraca

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109407|ref|XP_001650654.1| ribosomal protein S6 kinase [Aedes aegypti] gi|108883975|gb|EAT48200.1| AAEL000743-PA [Aedes aegypti]

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/147 (72%), Positives = 127/147 (86%), Gaps = 2/147 (1%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTADNRK TI+ IL+GKL +P YL  D+R+LIR+L+KRQV+QRLGSGP DG+AVR H 
Sbjct: 32  PPFTADNRKNTIDAILKGKLNIPAYLAADSRDLIRRLMKRQVSQRLGSGPTDGQAVRSHS 91

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+++NW DVL+R+L+PP KP L  EDDVSQFDTKFT+Q PVDSPD+S LSESANL+FQG
Sbjct: 92  FFKNVNWDDVLARRLDPPIKPVLRSEDDVSQFDTKFTKQIPVDSPDDSTLSESANLIFQG 151

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
           FTYVAPSVLEEM   +PR+V ARSPR+
Sbjct: 152 FTYVAPSVLEEMQ--QPRVVTARSPRR 176

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778784|ref|XP_395876.4| PREDICTED: ribosomal protein S6 kinase beta-1-like [Apis mellifera]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 139/175 (79%), Gaps = 12/175 (6%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT+DNRKKTIEKILRGKL LP YLTPD+R+LIRKLLKRQVAQRLGSGP+D E ++ H 
Sbjct: 269 PPFTSDNRKKTIEKILRGKLNLPQYLTPDSRDLIRKLLKRQVAQRLGSGPSDAEQIKNHL 328

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+ INW+DV+SRKLEPPF+P+L  EDDVSQFD KFT   P+DSP E  LSESAN VFQG
Sbjct: 329 FFKHINWNDVISRKLEPPFRPTLASEDDVSQFDKKFTTSAPIDSPAEYTLSESANRVFQG 388

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRK--------ETSSY---NYYLKPHHHHGL 194
           FTYVAPS+LE+M + +PR++ ARSPR+         T+ +   N +++ H H+G+
Sbjct: 389 FTYVAPSILEDM-YSQPRVINARSPRRGNMRGFSPRTTHFHLHNNHVQNHRHNGV 442

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170033167|ref|XP_001844450.1| ribosomal protein S6 kinase [Culex quinquefasciatus] gi|167873729|gb|EDS37112.1| ribosomal protein S6 kinase [Culex quinquefasciatus]

 Score =  229 bits (585), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 105/147 (71%), Positives = 126/147 (85%), Gaps = 2/147 (1%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTADNRK TI+ IL+GKL +P YL  D+R+LIR+L+KRQV+QRLGS P DG+AVR H 
Sbjct: 241 PPFTADNRKNTIDAILKGKLNIPAYLATDSRDLIRRLMKRQVSQRLGSSPTDGQAVRAHS 300

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+++NW DVL+R+L+PP KP L  EDDVSQFDTKFT+Q PVDSPD+S LSESANL+FQG
Sbjct: 301 FFKNVNWDDVLARRLDPPIKPILRSEDDVSQFDTKFTKQIPVDSPDDSTLSESANLIFQG 360

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
           FTYVAPSVLEEM   +PR+V ARSPR+
Sbjct: 361 FTYVAPSVLEEMQ--QPRVVTARSPRR 385

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544249|ref|XP_001606867.1| PREDICTED: ribosomal protein S6 kinase beta-1-like [Nasonia vitripennis]

 Score =  229 bits (585), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/177 (62%), Positives = 135/177 (76%), Gaps = 13/177 (7%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT++NR+ TIEKILRGKL+LP YLTPDAR+LIRKLLKRQVAQRLGS P D EA++ H 
Sbjct: 269 PPFTSNNRRSTIEKILRGKLVLPQYLTPDARDLIRKLLKRQVAQRLGSAPADAEAIKNHQ 328

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FF+ I W DV++RKLEPPFKP+L  EDDVSQFD +FT   P+DSP E  LSESAN VFQG
Sbjct: 329 FFKHICWHDVIARKLEPPFKPTLASEDDVSQFDKRFTTSAPIDSPAECTLSESANKVFQG 388

Query: 151 FTYVAPSVLEEMHHDKPRIVKARSPRKET-----------SSYNYYLKPHHHHGLPQ 196
           FTYVAPS+LE+M   +PR+V ARSPRK             + +N +++ H H+G+ Q
Sbjct: 389 FTYVAPSILEDMC--QPRVVNARSPRKNNMRGFSPRGNHFNLHNSHMQSHRHNGVGQ 443

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
FB|FBgn0015806	637	S6k "RPS6-p70-protein kinase"	0.562	0.227	0.693	8.7e-67
UNIPROTKB|F1RUZ0	485	RPS6KB2 "Uncharacterized prote	0.585	0.311	0.642	1.6e-63
UNIPROTKB|F1S224	525	RPS6KB1 "Uncharacterized prote	0.569	0.28	0.680	5.4e-63
UNIPROTKB|E2R7K9	482	RPS6KB2 "Uncharacterized prote	0.585	0.313	0.635	8.8e-63
UNIPROTKB|J9NU84	482	RPS6KB2 "Uncharacterized prote	0.585	0.313	0.635	8.8e-63
UNIPROTKB|F1P4J0	502	RPS6KB1 "Uncharacterized prote	0.569	0.292	0.673	1.4e-62
UNIPROTKB|F1MNP4	525	RPS6KB1 "Ribosomal protein S6	0.569	0.28	0.673	1.4e-62
UNIPROTKB|Q6TJY3	527	RPS6KB1 "Ribosomal protein S6	0.569	0.278	0.673	1.4e-62
UNIPROTKB|E2RMD8	525	RPS6KB1 "Uncharacterized prote	0.569	0.28	0.673	1.4e-62
UNIPROTKB|B4DLT4	472	RPS6KB1 "cDNA FLJ53847, highly	0.569	0.311	0.673	1.4e-62

FB|FBgn0015806 S6k "RPS6-p70-protein kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 553 (199.7 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
 Identities = 102/147 (69%), Positives = 124/147 (84%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFTA+NRKKTIE IL+ KL LP YLTP+AR+L+R+L+KRQ  QRLGSGP D  AV++HP
Sbjct:   277 PPFTAENRKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEPQRLGSGPEDAAAVQIHP 336

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FF+ +NW DVL+R+LEPP KP L  EDDVSQFDT+FTRQ PVDSPD++ LSESANL+FQG
Sbjct:   337 FFKHVNWDDVLARRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDSPDDTTLSESANLIFQG 396

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPS+LE+MH  +   + ARSPR+
Sbjct:   397 FTYVAPSILEDMH--RANRMPARSPRR 421

GO:0004711 "ribosomal protein S6 kinase activity" evidence=ISS;IDA

GO:0005840 "ribosome" evidence=ISS

GO:0048477 "oogenesis" evidence=IMP

GO:0045793 "positive regulation of cell size" evidence=IGI;NAS;IMP;TAS

GO:0030307 "positive regulation of cell growth" evidence=NAS;TAS

GO:0046622 "positive regulation of organ growth" evidence=NAS;TAS

GO:0045927 "positive regulation of growth" evidence=TAS

GO:0040018 "positive regulation of multicellular organism growth" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0007584 "response to nutrient" evidence=TAS

GO:0008361 "regulation of cell size" evidence=TAS

GO:0007015 "actin filament organization" evidence=IMP

GO:0007165 "signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0016239 "positive regulation of macroautophagy" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0030536 "larval feeding behavior" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0033554 "cellular response to stress" evidence=IDA

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0048786 "presynaptic active zone" evidence=IDA

GO:0007411 "axon guidance" evidence=IGI

GO:0010508 "positive regulation of autophagy" evidence=IMP

UNIPROTKB|F1RUZ0 RPS6KB2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 526 (190.2 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
 Identities = 97/151 (64%), Positives = 120/151 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFTA+NRKKT++KI+RGKL+LPPYLTPDAR+L++K LKR  +QR+G GP D   V+ HP
Sbjct:   267 PPFTAENRKKTMDKIIRGKLVLPPYLTPDARDLVKKFLKRNPSQRIGGGPGDAADVQKHP 326

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW D+L+R+++PPF+P L  E+DVSQFDT FTRQTPVDSPD++ LSESAN  F G
Sbjct:   327 FFRHINWEDLLARRVDPPFRPCLQSEEDVSQFDTHFTRQTPVDSPDDTALSESANQAFLG 386

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
             FTYVAPSVL+ +        K RSPR+  SS
Sbjct:   387 FTYVAPSVLDSIKEGFSFQPKLRSPRRLNSS 417

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1S224 RPS6KB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 520 (188.1 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
 Identities = 100/147 (68%), Positives = 118/147 (80%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+VHP
Sbjct:   291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQVHP 350

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   411 FTYVAPSVLESVKEKFSFEPKIRSPRR 437

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0031929 "TOR signaling cascade" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E2R7K9 RPS6KB2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 519 (187.8 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 96/151 (63%), Positives = 119/151 (78%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFTA+NRKKT++KI++GKL LPPYLTPDAR+L++K LKR  +QR+G GP D   V+ HP
Sbjct:   265 PPFTAENRKKTMDKIIKGKLTLPPYLTPDARDLVKKFLKRNPSQRIGGGPGDSADVQRHP 324

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW D+L+R+++PPF+P L  E+DVSQFDT FTRQTPVDSPD++ LSESAN  F G
Sbjct:   325 FFRHINWDDLLARRIDPPFRPCLQSEEDVSQFDTHFTRQTPVDSPDDTALSESANQAFLG 384

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
             FTYVAPSVL+ +        K RSPR+  SS
Sbjct:   385 FTYVAPSVLDSIKEGFSFQPKLRSPRRLNSS 415

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|J9NU84 RPS6KB2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 519 (187.8 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 96/151 (63%), Positives = 119/151 (78%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFTA+NRKKT++KI++GKL LPPYLTPDAR+L++K LKR  +QR+G GP D   V+ HP
Sbjct:   265 PPFTAENRKKTMDKIIKGKLTLPPYLTPDARDLVKKFLKRNPSQRIGGGPGDSADVQRHP 324

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW D+L+R+++PPF+P L  E+DVSQFDT FTRQTPVDSPD++ LSESAN  F G
Sbjct:   325 FFRHINWDDLLARRIDPPFRPCLQSEEDVSQFDTHFTRQTPVDSPDDTALSESANQAFLG 384

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRKETSS 181
             FTYVAPSVL+ +        K RSPR+  SS
Sbjct:   385 FTYVAPSVLDSIKEGFSFQPKLRSPRRLNSS 415

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1P4J0 RPS6KB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 516 (186.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 99/147 (67%), Positives = 117/147 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct:   268 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 327

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   328 FFRHINWDELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 387

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   388 FTYVAPSVLESVKEKFSFEPKIRSPRR 414

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0031929 "TOR signaling cascade" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

UNIPROTKB|F1MNP4 RPS6KB1 "Ribosomal protein S6 kinase beta-1" [Bos taurus (taxid:9913)]

 Score = 516 (186.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 99/147 (67%), Positives = 117/147 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct:   291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSALSESANQVFLG 410

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   411 FTYVAPSVLESVKEKFSFEPKIRSPRR 437

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0031929 "TOR signaling cascade" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q6TJY3 RPS6KB1 "Ribosomal protein S6 kinase beta-1" [Bos taurus (taxid:9913)]

 Score = 516 (186.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 99/147 (67%), Positives = 117/147 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct:   291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSALSESANQVFLG 410

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   411 FTYVAPSVLESVKEKFSFEPKIRSPRR 437

GO:0004672 "protein kinase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0071363 "cellular response to growth factor stimulus" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043005 "neuron projection" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0045948 "positive regulation of translational initiation" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0031929 "TOR signaling cascade" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E2RMD8 RPS6KB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 516 (186.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 99/147 (67%), Positives = 117/147 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct:   291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 350

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   351 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 410

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   411 FTYVAPSVLESVKEKFSFEPKIRSPRR 437

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|B4DLT4 RPS6KB1 "cDNA FLJ53847, highly similar to Ribosomal protein S6 kinase beta-1 (EC 2.7.11.1)" [Homo sapiens (taxid:9606)]

 Score = 516 (186.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 99/147 (67%), Positives = 117/147 (79%)

Query:    31 PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
             PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct:   238 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 297

Query:    91 FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
             FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN VF G
Sbjct:   298 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQVFLG 357

Query:   151 FTYVAPSVLEEMHHDKPRIVKARSPRK 177
             FTYVAPSVLE +        K RSPR+
Sbjct:   358 FTYVAPSVLESVKEKFSFEPKIRSPRR 384

GO:0005840 "ribosome" evidence=IEA

GO:0003009 "skeletal muscle contraction" evidence=IEA

GO:0004711 "ribosomal protein S6 kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007281 "germ cell development" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0007584 "response to nutrient" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0009611 "response to wounding" evidence=IEA

GO:0009612 "response to mechanical stimulus" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0009749 "response to glucose stimulus" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0014732 "skeletal muscle atrophy" evidence=IEA

GO:0014878 "response to electrical stimulus involved in regulation of muscle adaptation" evidence=IEA

GO:0014911 "positive regulation of smooth muscle cell migration" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0032870 "cellular response to hormone stimulus" evidence=IEA

GO:0033574 "response to testosterone stimulus" evidence=IEA

GO:0033762 "response to glucagon stimulus" evidence=IEA

GO:0034612 "response to tumor necrosis factor" evidence=IEA

GO:0042277 "peptide binding" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0043201 "response to leucine" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0046324 "regulation of glucose import" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0048633 "positive regulation of skeletal muscle tissue growth" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0051384 "response to glucocorticoid stimulus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BSK8	KS6B1_MOUSE	2, ., 7, ., 1, 1, ., 1	0.6622	0.5852	0.2876	yes	N/A
P23443	KS6B1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.6622	0.5852	0.2876	yes	N/A
Q6TJY3	KS6B1_BOVIN	2, ., 7, ., 1, 1, ., 1	0.6622	0.5852	0.2865	yes	N/A
P67999	KS6B1_RAT	2, ., 7, ., 1, 1, ., 1	0.6622	0.5852	0.2876	yes	N/A
P67998	KS6B1_RABIT	2, ., 7, ., 1, 1, ., 1	0.6622	0.5852	0.2876	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	258
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-80
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-34
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-34
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-30
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-30
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-28
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-28
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	9e-28
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-27
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-27
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-26
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-26
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-24
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-24
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-22
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-22
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-21
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-21
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	3e-20
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-20
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-20
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	8e-20
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-19
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-19
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-18
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-18
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-18
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-18
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-17
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-16
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	5e-16
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-15
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-15
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-15
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-15
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-15
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-14
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-14
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	8e-14
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-14
pfam00433	47	pfam00433, Pkinase_C, Protein kinase C terminal do	6e-13
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-13
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-12
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-11
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-11
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-10
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-10
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-09
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	5e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-07
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-07
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-06
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	8e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.001
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.001
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	0.003

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  243 bits (623), Expect = 3e-80
 Identities = 91/126 (72%), Positives = 109/126 (86%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFTA+NRKKTI+KIL+GKL LPPYLTP+AR+L++KLLKR  + RLG+GP D   V+ HP
Sbjct: 198 PPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           FFR +NW D+L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S LSESAN +F G
Sbjct: 258 FFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQIFLG 317

Query: 151 FTYVAP 156
           FTYVAP
Sbjct: 318 FTYVAP 323

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  125 bits (316), Expect = 2e-34
 Identities = 53/126 (42%), Positives = 82/126 (65%), Gaps = 2/126 (1%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
            PF  D+ ++  + I+  ++  P +L+ +A  ++R+LL+R   +RLGSG  D E V+  P
Sbjct: 199 SPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES--LLSESANLVF 148
           FFR INW D+L+RK++PPF P++ G +DVS FD +FT + PV +P     LL+E    +F
Sbjct: 259 FFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDEEFTSEAPVLTPPREPRLLTEEEQELF 318

Query: 149 QGFTYV 154
           +GF YV
Sbjct: 319 RGFDYV 324

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  124 bits (314), Expect = 4e-34
 Identities = 54/123 (43%), Positives = 85/123 (69%), Gaps = 1/123 (0%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+P+A+ L+R L KR  A RLG+GP+  E ++ HPF
Sbjct: 197 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
           F +I+W+ +  R+++PPFKP++   DD   FD +FT +TP DSP     S +A+ +F+GF
Sbjct: 257 FSTIDWNKLYRREIKPPFKPAVGRPDDTFYFDPEFTSRTPKDSPGIP-PSANAHQLFRGF 315

Query: 152 TYV 154
           ++V
Sbjct: 316 SFV 318

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  114 bits (288), Expect = 2e-30
 Identities = 41/93 (44%), Positives = 58/93 (62%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF  DN  +  EKIL GK+  P + +PDA++LIR LL+  + +RLG+  N    ++ HP
Sbjct: 196 PPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           +F  I+W  +L RK+E PF P + G  D S FD
Sbjct: 256 WFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFD 288

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  113 bits (285), Expect = 8e-30
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 1/126 (0%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF  D+  +  + IL  ++  P +L+ +A+ +++  L +   +RLG  P   + ++ H
Sbjct: 193 QSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
           PFFR I+W  +  ++++PPFKP + G  DVS FD +FT++ PV +P DE+++       F
Sbjct: 253 PFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEF 312

Query: 149 QGFTYV 154
           +GF+Y+
Sbjct: 313 RGFSYI 318

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  110 bits (277), Expect = 1e-28
 Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 6/129 (4%)

Query: 32  PFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           PFT +  + T      +IL+     P ++ P+A++L+ KLL++   +RLG+GP     ++
Sbjct: 206 PFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIK 265

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLV 147
            HPFF+ ++W  +  RK+ PPF+PS+  E DV  F  +FT   PV SP  +    S   V
Sbjct: 266 EHPFFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEPVYSPAGT--PPSGARV 323

Query: 148 FQGFTYVAP 156
           FQG+++VAP
Sbjct: 324 FQGYSFVAP 332

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  110 bits (276), Expect = 1e-28
 Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 10/132 (7%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF + +  +  + IL   L L P ++  AR L+  LL++   +RLG+  +D   ++ H 
Sbjct: 194 PPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK-DDFLEIKNHV 252

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVD-----SPDESLLSES-- 143
           FF SINW D++++K+ PPF P+++G  D+  FD +FT + PV      SPD  L+S S  
Sbjct: 253 FFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPEFTEE-PVPNSVGKSPDSVLVSASVK 311

Query: 144 -ANLVFQGFTYV 154
            A+  F GF+Y 
Sbjct: 312 EADDAFLGFSYA 323

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  107 bits (270), Expect = 9e-28
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 5/129 (3%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP D + +  H F
Sbjct: 194 PFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQT-----PVDSPDESLLSESANL 146
           F SINW DV+ +KLEPPFKP +T E D   FD +FT Q+     P       LL      
Sbjct: 254 FASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDRYDSLGLLQLEERP 313

Query: 147 VFQGFTYVA 155
            F  F+Y A
Sbjct: 314 HFPQFSYSA 322

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  105 bits (263), Expect = 8e-27
 Identities = 44/130 (33%), Positives = 78/130 (60%), Gaps = 3/130 (2%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG--EA 85
           A +PPF ADN     E IL   ++ P +L+ +A  +++  + +   +RLG   + G  +A
Sbjct: 191 AGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDA 250

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESA 144
           ++ HPFF+ I+W  +  RK++PPFKP +  + DV+ FD  FT++ PV +P D +++ +  
Sbjct: 251 IKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEPVLTPVDPAVIKQIN 310

Query: 145 NLVFQGFTYV 154
              F+GF++ 
Sbjct: 311 QEEFRGFSFF 320

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  105 bits (263), Expect = 9e-27
 Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 3/124 (2%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF  +N  +   KIL+  L  P     DA++L+  LL R   +RLG   N  + ++ HP
Sbjct: 191 PPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGY--NGAQEIKNHP 248

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDS-PDESLLSESANLVFQ 149
           FF  ++W  +L + ++PPFKP+++   D S FD +FTR+ P+DS  D+S LSE+    F 
Sbjct: 249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFTREKPIDSVVDDSHLSETVQQQFG 308

Query: 150 GFTY 153
           G++Y
Sbjct: 309 GWSY 312

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  103 bits (259), Expect = 4e-26
 Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 2/126 (1%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE-AVRVHP 90
           PF A+N     E IL  +++ P +L+ DA ++++  + +    RLGS    GE A+  HP
Sbjct: 195 PFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHP 254

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQ 149
           FF+ ++W  +  R++EPPF+P +   +DVS FD  F ++ PV +P +ESLL       F+
Sbjct: 255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDPVLTPIEESLLPMINQDEFR 314

Query: 150 GFTYVA 155
            F+Y A
Sbjct: 315 NFSYTA 320

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  103 bits (258), Expect = 4e-26
 Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 5/129 (3%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 194 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 253

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDESLLSESANLV 147
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q    TP D  D   L E     
Sbjct: 254 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRT 313

Query: 148 -FQGFTYVA 155
            F  F+Y A
Sbjct: 314 HFPQFSYSA 322

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 99.7 bits (248), Expect = 1e-24
 Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 5/131 (3%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + +  H F
Sbjct: 195 PFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQT-PVDSPDESLLSESANLV--- 147
           F  I W DV  +KL PPFKP +T E D   FD +FT Q   +  PD+    E+ +     
Sbjct: 255 FAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDSMETVDNERRP 314

Query: 148 -FQGFTYVAPS 157
            F  F+Y A +
Sbjct: 315 HFPQFSYSASA 325

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 99.1 bits (247), Expect = 2e-24
 Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A +PPF  ++  +  + I+   +  P  L+ +A  + + LL +  A+RLG GP     +R
Sbjct: 196 AGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIR 255

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANL 146
            H FFR I+W  +  R+++PPFKP + G      FD  FTR+ PV +P D+ +++     
Sbjct: 256 EHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPPDKLVIANIDQS 315

Query: 147 VFQGFTYV 154
            FQGF++V
Sbjct: 316 EFQGFSFV 323

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 92.9 bits (231), Expect = 4e-22
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  ++  +  + IL  +   P +++ +A++ + KL +R   +RLG    DG+ +R HPF
Sbjct: 195 PFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGV---DGD-IRQHPF 250

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQG 150
           FR I+W  +  R++ PPFKP +    D S FD +FT +    SP D+ LL+      F+G
Sbjct: 251 FRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKVRLSPVDKKLLASMDQEQFRG 310

Query: 151 FTYVAP 156
           F++  P
Sbjct: 311 FSFTNP 316

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 91.3 bits (227), Expect = 9e-22
 Identities = 41/95 (43%), Positives = 57/95 (60%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
            PPF  DN     EKIL GKL  P +L   A++LI+KLL     +RLG+  N  + V+ H
Sbjct: 195 YPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
            +F+S++W DV  RKL+PP  P ++ + D S FD 
Sbjct: 255 RWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDD 289

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 91.3 bits (226), Expect = 1e-21
 Identities = 44/106 (41%), Positives = 60/106 (56%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL   +  P  L+ DA+ L+  LL +   +RLG GP+D + +  H F
Sbjct: 194 PFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE 137
           F  +NW DV  +KL PPFKP +T E D   FD +FT QT   +P E
Sbjct: 254 FTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPE 299

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 90.1 bits (223), Expect = 5e-21
 Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 10/134 (7%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF + N  +  + IL   L L P +T  AR L+  LL++   +RLG+  +D   ++ H 
Sbjct: 194 PPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKNHI 252

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-----DSPDESLLSES-- 143
           FF  INW D++++K+ PPF P+++G +D+  FD +FT + PV      SPD  L++ S  
Sbjct: 253 FFSPINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEE-PVPNSIGQSPDSILVTASVK 311

Query: 144 -ANLVFQGFTYVAP 156
            A   F GF+Y  P
Sbjct: 312 EAAEAFLGFSYAPP 325

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 81.3 bits (201), Expect = 3e-20
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 93  RSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESAN-LVFQGF 151
           R I+W  + ++++EPPF P +    D S FD +FT +TPV +P +S LS       F+GF
Sbjct: 1   RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETPVLTPVDSPLSGGIQQEPFRGF 60

Query: 152 TYVA 155
           +YV 
Sbjct: 61  SYVF 64

Length = 64

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 87.3 bits (216), Expect = 3e-20
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF  D+  +  E I       P ++T ++++++ KL +R   +RLG   N    +R H
Sbjct: 193 QSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGN----IRGH 248

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
           PFF++INW+ +  R+L+PPFKP +    D S FD +F  + P +   D++L+       F
Sbjct: 249 PFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLSEKPRLSYSDKNLIDSMDQSAF 308

Query: 149 QGFTYVAP 156
            GF+++ P
Sbjct: 309 AGFSFINP 316

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 86.6 bits (214), Expect = 7e-20
 Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF   +  +  + IL   L+L P  +  A  ++ +LL++   +RLG+   D   ++ HP
Sbjct: 194 PPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGA-KEDFLEIQEHP 252

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVD----SPDESLLSES--- 143
           FF S++W+D+  +K+ PPF P++ G DD+S FD  FT +T       S D S+++ S   
Sbjct: 253 FFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDAVFTEETVPYSVCFSSDYSIVNASVLE 312

Query: 144 ANLVFQGFTYVAP 156
           A+  F GF+Y  P
Sbjct: 313 ADDAFVGFSYAPP 325

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 86.6 bits (214), Expect = 8e-20
 Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A +PPF  ++  +  + I+   +  P  L+ +A  + + L+ +  ++RLG GP     +R
Sbjct: 196 AGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIR 255

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
            H FFR I+W  + +R+++PPFKP + G+     FD  FTR  PV   PD+ +++     
Sbjct: 256 EHAFFRRIDWDKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLTPPDQLVIANIDQA 314

Query: 147 VFQGFTYV 154
            F+GF+YV
Sbjct: 315 DFEGFSYV 322

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 85.4 bits (211), Expect = 2e-19
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 5/128 (3%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++  + I       P +LT +A++++ KL  R+  +RLG   +    +R H
Sbjct: 193 QSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGD----IRQH 248

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
           PFFR I+WS +  R++EPPFKP +   +D S FD +F  + P +   D  L++     +F
Sbjct: 249 PFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKPRLSVTDRMLINSMDQNMF 308

Query: 149 QGFTYVAP 156
           + F+++ P
Sbjct: 309 ENFSFINP 316

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 31  PPFTADNRKKTIEKILRGK--LILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF +D  ++T  KI+  K  L  PP   ++P+A +LI +LL      RLGS     E +
Sbjct: 228 PPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDP-EDRLGSF----EEI 282

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE---- 142
           + HPFF+ I+W ++   K  PPF P L+   D S FD         D      LS+    
Sbjct: 283 KSHPFFKGIDWENLRETK--PPFVPELSSPLDTSNFD-----DFEDDKDLSDYLSQNSKK 335

Query: 143 ---SANLVFQGFTY 153
                 L F GFTY
Sbjct: 336 LNKGKQLAFVGFTY 349

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 81.0 bits (201), Expect = 2e-18
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF A++RK+  EKIL+  L  P +L+P+AR+LI  LL++   +RLGSG    E ++ H
Sbjct: 190 KPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG--AEEIKAH 247

Query: 90  PFF 92
           PFF
Sbjct: 248 PFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 82.3 bits (203), Expect = 3e-18
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF + +  +  + IL   L LP   T  A +L+  LL +   +RLG+   D   ++ H 
Sbjct: 194 PPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGA-KADFLEIKNHV 252

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDS----PDESLLSESANL 146
           FF  INW D+  +++ PP+ P++ G  D+  FD +FT++    S    PD +  S SA+ 
Sbjct: 253 FFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPEFTQEAVSSSVGQTPDLTASSSSASS 312

Query: 147 VFQGFTYVA 155
            F GF+Y  
Sbjct: 313 AFLGFSYAP 321

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 81.2 bits (200), Expect = 6e-18
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 2/128 (1%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A + PF  ++  +  + I+   +  P  ++ +A  + + L+ +   +RLG GP     ++
Sbjct: 196 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 255

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
            H FFR I+W  +  ++++PP+KP   G  D   FD  FTR  PV   PD+ ++      
Sbjct: 256 EHAFFRYIDWEKLERKEVQPPYKPKACGR-DAENFDKFFTRHPPVLTPPDQEVIMNLDQS 314

Query: 147 VFQGFTYV 154
            F+GF+YV
Sbjct: 315 EFEGFSYV 322

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 81.4 bits (201), Expect = 6e-18
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF  D   +  EKIL G+L  P +    AR+L++ LL+    +RLG+       V+ HP
Sbjct: 213 PPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL--LSESANLVF 148
           +F   NW  + +R    P    +    D S F+     + P DSP + L  L+ +    F
Sbjct: 273 YFHGANWDKLYARYYPAPIPVRVKSPGDTSNFE-----KYP-DSPVDRLPPLTAAQQAEF 326

Query: 149 QGF 151
            GF
Sbjct: 327 AGF 329

Length = 329

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 78.8 bits (194), Expect = 4e-17
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)

Query: 32  PFTADNRKKTIEKILRGKLILPP-YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PF A++ ++    I  GK+  P   L+ + R+ ++ LL R    RLG+   D   ++ HP
Sbjct: 196 PFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGA-HRDAVELKEHP 254

Query: 91  FFRSINWSDVLSRKL-EPPFKPSLTGEDDVSQFDTKFTRQTPVD-------------SPD 136
           FF  I+W D+LS+K   PPFKP +  ++DVS FD +FT  + ++               +
Sbjct: 255 FFADIDW-DLLSKKQITPPFKPIVDSDEDVSNFDPEFTNSSLLNAGIVPWEDVPGLPGAN 313

Query: 137 ESLLSESANLVFQGFTY 153
            + LS S    F+GFT+
Sbjct: 314 STPLSSSVQENFRGFTF 330

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 75.6 bits (186), Expect = 5e-16
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFTAD 36
          MKVL+KA+IVRNQKDTAHTKAERNILEAVK PF  D
Sbjct: 29 MKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVD 64

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 76.0 bits (187), Expect = 5e-16
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 15/133 (11%)

Query: 31  PPFTADNRKKTIEKIL--RGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF ++N  +T  KI+  R  L  P   +L+ +A +LIR+L+      RLG G      +
Sbjct: 246 PPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH--EI 302

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP------VDSPDESLL 140
           + HPFFR ++W  +  R++  PF P L    D S F T    Q P        +P +   
Sbjct: 303 KSHPFFRGVDWDTI--RQIRAPFIPQLKSITDTSYFPTDELEQVPEAPALKQAAPAQQEE 360

Query: 141 SESANLVFQGFTY 153
           S   +L F G+TY
Sbjct: 361 SVELDLAFIGYTY 373

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 9/91 (9%)

Query: 32  PFTADNRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGS--GPNDGEAVR 87
           PF   NR +T   IL+ ++  P    ++  AR+LIRKLL +  ++RLGS  G  +   ++
Sbjct: 231 PFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAE---IK 287

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDD 118
            HPFFR +NW+  L R   PP  P      D
Sbjct: 288 QHPFFRGVNWA--LIRHTTPPIIPRPDDGID 316

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 31  PPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF +DN ++T  KI+  K  L  P    L+P+A++LI++L   +  +RLG+  N    +
Sbjct: 237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN--NGVNEI 293

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE---- 142
           + HPFF+ ++W  +  R    P  P L    D S FD  F  +  +D P           
Sbjct: 294 KSHPFFKGVDWEHIRERP--APIIPELKSITDTSNFD-DF-EEIDLDVPTSPGPPRGKIK 349

Query: 143 SANLVFQGFTY 153
           S +L F G+TY
Sbjct: 350 SKDLAFIGYTY 360

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 73.5 bits (180), Expect = 3e-15
 Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 32  PFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           PFT D  K +      +IL+ +   P  ++  A+++I++LL +   +RLG GP+D + ++
Sbjct: 207 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266

Query: 88  VHPFFRSINWSDVLSRKLEPPFKP 111
            HPFF+ INW D+ ++K+  PFKP
Sbjct: 267 KHPFFQKINWDDLAAKKVPAPFKP 290

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 73.3 bits (180), Expect = 4e-15
 Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 2/112 (1%)

Query: 45  ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA-VRVHPFFRSINWSDVLSR 103
           IL  ++ +P  L+  A  +++  L +   +RLG  P  G   ++ HPFFR+I+W  +  +
Sbjct: 217 ILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQK 276

Query: 104 KLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-LLSESANLVFQGFTYV 154
           ++ PP+KP++  + D+  FD +FT +    +PD+  +++      F+GF Y+
Sbjct: 277 QVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDPDVIARIDQSEFEGFEYI 328

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 72.1 bits (177), Expect = 6e-15
 Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 6/84 (7%)

Query: 32  PFTAD---NRKKTIEK-ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           PFT D   N +  I + IL+ K   P  ++ +AR+ I+KLL++   +RLG+  N  + ++
Sbjct: 207 PFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGA--NGADEIK 264

Query: 88  VHPFFRSINWSDVLSRKLEPPFKP 111
            HPFF+ I+W D+ ++++  PFKP
Sbjct: 265 NHPFFQGIDWDDLAAKRIPAPFKP 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 71.2 bits (174), Expect = 2e-14
 Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 11/138 (7%)

Query: 28  AVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS 78
           A + PF    ++DN  +  E      IL  ++ +P  L+  A  +++  L +   +RLG 
Sbjct: 191 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250

Query: 79  GPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-D 136
            P  G A ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD +FT +    +P D
Sbjct: 251 HPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDD 310

Query: 137 ESLLSESANLVFQGFTYV 154
           + ++ +     F+GF Y+
Sbjct: 311 DDIVRKIDQSEFEGFEYI 328

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 70.2 bits (172), Expect = 5e-14
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 32  PFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           PF      KT   I+  +  L     P ++ D  +LI+ LL  Q  +RLG      E + 
Sbjct: 208 PFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLCGQ-KERLGY-----EGLC 261

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESA--- 144
            HPFF  I+W+++  R   PPF P+L  +DD S FD +  + +   S   +   +     
Sbjct: 262 CHPFFSKIDWNNI--RNSLPPFVPTLKSDDDTSNFD-EPEKNSTRRSQSSTTQLKPNGFS 318

Query: 145 --NLVFQGFTYV 154
             +L F GF+++
Sbjct: 319 GKDLPFVGFSFI 330

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 69.7 bits (170), Expect = 8e-14
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 45  ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG-EAVRVHPFFRSINWSDVLSR 103
           IL   + +P +L+  A  +++  L +   +RLG  P  G   ++ H FFRSI+W  +  +
Sbjct: 215 ILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKK 274

Query: 104 KLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQGFTYV 154
           ++ PPFKP +T +  +  FDT+FT +    +P DE ++       F+GF Y+
Sbjct: 275 QVTPPFKPQITDDYGLENFDTQFTSEPVQLTPDDEDVIKRIDQSEFEGFEYI 326

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 68.8 bits (169), Expect = 8e-14
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 30  KPPFTADNRK--KTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           +PPF  D+    +    IL+G  KL  P Y+   A++LI++LL+R   +RLG+     + 
Sbjct: 189 RPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKD 248

Query: 86  VRVHPFFRSINWSD 99
           ++ H +F   +W  
Sbjct: 249 IKKHKWFNGFDWEG 262

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|215917 pfam00433, Pkinase_C, Protein kinase C terminal domain

 Score = 61.5 bits (150), Expect = 6e-13
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 113 LTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQGFTYVAPS 157
           +    D S FD +FT + P  SP D  +LS    L F+GF+YV P 
Sbjct: 2   VKSPTDTSNFDPEFTSEPPKLSPPDSEVLSSIDQLEFRGFSYVNPE 47

Length = 47

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 66.7 bits (163), Expect = 8e-13
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 31  PPFTADNRKKTIEKILRGKLILP---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
            PF  D  ++   +++   +  P     L  DA++LI +LL++   +RLG+G      V+
Sbjct: 214 VPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG--GAFEVK 271

Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
            H FF  ++W+ +L +K E  F P L  EDD S FD
Sbjct: 272 QHRFFLGLDWNGLLRQKAE--FIPQLESEDDTSYFD 305

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 66.5 bits (162), Expect = 1e-12
 Identities = 30/93 (32%), Positives = 51/93 (54%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF A+      +KIL G +  P +L  + + L++KLL   + +R G+     + V+ HP
Sbjct: 226 PPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP 285

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           +F +I+W  +L + +E P+KP      D S F+
Sbjct: 286 WFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFE 318

Length = 340

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 28  AVKPPFTADNRKKTIEK------ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPN 81
           A + PF    RK+ +EK       L   +  P   +P+A++L   LL++   +RLG    
Sbjct: 189 AGRSPFRQ--RKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGG 246

Query: 82  DGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
             + VR HP F+ +NW  + +  LEPPF P
Sbjct: 247 SADEVREHPLFKDLNWRRLEAGMLEPPFIP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 31  PPFTADNRKKTIEKILRGK--LILP--PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            PF AD+   T  KI+  K  L  P    ++  A++LI   L  +   RLG   N  + +
Sbjct: 245 TPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDR-EVRLGR--NGVDEI 301

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
           + HPFF++  W+    R+   P  P L+ + D S FD         ++           L
Sbjct: 302 KSHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIEDDDKNEETFPLPKAFAGNQL 361

Query: 147 VFQGFTY 153
            F GFTY
Sbjct: 362 PFIGFTY 368

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 3e-11
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 12/129 (9%)

Query: 32  PFTADNRKKTIEKILRGK--LILPPYLT---PDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PF A++  +T  KI+  K     PP +T    +A++LIR+L+      RLG   N  +  
Sbjct: 207 PFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSP-ETRLGR--NGLQDF 263

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDS-PDESLLSESAN 145
           + HPFF  I+W ++  R    P+ P ++   D S FD         +S P  S  + S N
Sbjct: 264 KDHPFFEGIDWDNI--RNSTAPYVPEVSSPTDTSNFDVDDDDLRNTESLPPSSHGAFSGN 321

Query: 146 -LVFQGFTY 153
            L F GFTY
Sbjct: 322 HLPFVGFTY 330

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 31  PPFTADNRKKTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV 88
           PPF  +  ++  + IL GK+  P    ++ +A +LI KLL     +RLG+     E ++ 
Sbjct: 199 PPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGA--KSIEEIKN 256

Query: 89  HPFFRSINW 97
           HPFF+ I+W
Sbjct: 257 HPFFKGIDW 265

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 61.4 bits (150), Expect = 4e-11
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF   N   T +KIL+ +   PP   PDA++LI KLL      RLG      + ++ H
Sbjct: 219 KPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNE-GYDELKAH 277

Query: 90  PFF 92
           PFF
Sbjct: 278 PFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF A+      + IL  ++  P     + +P+A +LI +LL    A+RLG+  N  + +
Sbjct: 191 PPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGA--NGYQEI 248

Query: 87  RVHPFFRSINW 97
           + HPFF+SINW
Sbjct: 249 KSHPFFKSINW 259

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 30  KPPFTADNRKKTIEKIL--RGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           +PPF AD   +T  K++     L +P    L+ +A +LI +L       RLG   N  + 
Sbjct: 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGK--NGADE 297

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
           ++ HPFF+ I+++  L R+ + P+ P +T   D S FD 
Sbjct: 298 IKAHPFFKGIDFAS-LIRRQKAPYIPKITHPTDTSNFDP 335

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 59.1 bits (143), Expect = 3e-10
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query: 57  TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           +  AR + R+LL +    RLG      E V+ HPFFR+ N+  + +  LEPPF P
Sbjct: 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)

Query: 31  PPFTADNRKKTIEKILRGKLIL--PPYLTP------DARELIRKLLKRQVAQRLGSGPND 82
           PPF+     +T E +   K  L  P Y  P      +A +LI KL+    ++R GS    
Sbjct: 196 PPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDP-SRRFGSL--- 251

Query: 83  GEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
            E ++ HPFF+ ++W+++  R+L+PPF P L  E D   FD
Sbjct: 252 -EDIKNHPFFKEVDWNEL--RELKPPFVPELESEIDTGYFD 289

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 16/112 (14%)

Query: 30  KPPFTADNRKKTIEKILRGK--LILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           +PPF A    +T  K++  +  L +PP   L+P+A +LI KL  R    RLG   N  + 
Sbjct: 245 QPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK--NGADE 301

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE 137
           ++ HPFF++I++S  L R+   P+ P +T   D S FD       PVD PD+
Sbjct: 302 IKAHPFFKTIDFSSDL-RQQSAPYIPKITHPTDTSNFD-------PVD-PDK 344

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 56.2 bits (135), Expect = 3e-09
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 12/129 (9%)

Query: 32  PFTADNRKKTIEKIL--RGKLILPPYLT---PDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PF A++  +T  KI+    +   P ++T    +A++LI++L+  +  +RLG   N  E  
Sbjct: 207 PFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSR-ERRLGQ--NGIEDF 263

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSESA 144
           + H FF  I+W ++  R LE P+ P ++   D S FD      R   +  P         
Sbjct: 264 KKHAFFEGIDWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNPEIAPPSSHTGFSGL 321

Query: 145 NLVFQGFTY 153
           +L F GFTY
Sbjct: 322 HLPFVGFTY 330

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 52.4 bits (125), Expect = 5e-08
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 14/132 (10%)

Query: 32  PFTADNRKKTIEKIL--RGKLILPPYLT---PDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PF A++  +T  KI+  + +   P  +T    DA++LIR+L+  +   RLG   N  E  
Sbjct: 207 PFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSR-EHRLGQ--NGIEDF 263

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK---FTRQTPVDSPDESLLSES 143
           + HPFF  I+W ++  R  E P+ P ++   D S FD           +  P  +  S  
Sbjct: 264 KQHPFFTGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPSHTAFS-G 320

Query: 144 ANLVFQGFTYVA 155
            +L F GFTY +
Sbjct: 321 HHLPFVGFTYTS 332

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 52.2 bits (125), Expect = 5e-08
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ R L+  LL+R V +RLG      + V+ HPFFRS++W  V  +K  PP  P
Sbjct: 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ + L+  LL+R V++RLG      + V+ H FF+ I+W  V  +K  PP  P
Sbjct: 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIP 277

Query: 112 S 112
            
Sbjct: 278 P 278

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 30  KPPFTADNRKKTIEKILR-GKLILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + PF    +K   E++ R  K +   Y    +PDAR L + LL +   +RLG        
Sbjct: 198 QSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGARE 257

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKP 111
           V+ HP F+ IN+  + +  LEPPFKP
Sbjct: 258 VKEHPLFKQINFKRLEAGMLEPPFKP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 28  AVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           A + PF A       K+  ++IL   +  P   +P ++     LL +   +RLG    + 
Sbjct: 192 AARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNC 251

Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           + +R HP FR +NW  + +  L PPF P
Sbjct: 252 DGLRTHPLFRDLNWRQLEAGMLPPPFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 21/56 (37%), Positives = 32/56 (57%)

Query: 56  LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
            + DA+ + R LL +   +RLG   N    V+ HP F++IN+  + +  LEPPF P
Sbjct: 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 30  KPPFTADNRKKTIEKIL--RGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           +PPF A    +T  K++     L +PP   L+P+A +LI KL      +RLG   N  + 
Sbjct: 245 QPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCC-SAEERLGR--NGADD 301

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
           ++ HPFF  +++S  + R    P+ P ++   D S FD         D+  +S
Sbjct: 302 IKAHPFFSEVDFSSDI-RTQPAPYVPKISHPMDTSNFDPVEEESPWNDASGDS 353

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MKVL+K  I++  K+  HT  ERNIL  +  PF
Sbjct: 23 MKVLKKKKIIKR-KEVEHTLTERNILSRINHPF 54

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 30  KPPFTAD-NRKKTIEKILRGKLILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           KPPF  D    +  +KI + K   PP    ++P+A++LIRKLL +   +RL +     E 
Sbjct: 193 KPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTA-----EE 247

Query: 86  VRVHPFF 92
              HPFF
Sbjct: 248 ALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 46.3 bits (110), Expect = 6e-06
 Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVK-PPF 33
          MKVL+KA+IV+  K   HT+ ER +LEAV+  PF
Sbjct: 33 MKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPF 66

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)

Query: 31  PPFTADNRKKTIEKILRGK--LILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF ++  ++T  K++  K  L+ PP   ++  A++LI +        R+GS  N  E +
Sbjct: 234 PPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGS--NGVEEI 290

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE--SA 144
           + HPFF  ++W  +  R    P +  +   DD S FD +F     +   + ++  +  S 
Sbjct: 291 KSHPFFEGVDWGHIRERPAAIPIE--IKSIDDTSNFD-EFPESDILQPAENTIEPDYKSK 347

Query: 145 NLVFQGFTY 153
           + VF  +TY
Sbjct: 348 DWVFLNYTY 356

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 45.7 bits (108), Expect = 9e-06
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 38  RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW 97
           R++   ++L  + +     + +A+ + + LL +   QRLG        V+ HPFFR++N+
Sbjct: 210 REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269

Query: 98  SDVLSRKLEPPFKP 111
             + +  L+PPF P
Sbjct: 270 KRLEAGMLDPPFVP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 56  LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
            T +++++ R  L ++   RLGS   + +  R H FF++IN+  + +  + PPF P
Sbjct: 222 FTEESKDICRLFLAKKPEDRLGSREKNDDP-RKHEFFKTINFPRLEAGLIPPPFVP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 9/97 (9%)

Query: 32  PFTADNRKKTIEKILRGK--LILP--PYLTPDARELIRKLLK-RQVAQRLGSGPNDGEAV 86
           PF AD+   T  KI+  K  L  P    ++ +A+ LI   L  R+V  RLG   N  E +
Sbjct: 246 PFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV--RLGR--NGVEEI 301

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           + H FF++  W+    R    P  P L+ + D S FD
Sbjct: 302 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 338

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPFT 34
          +K+L KA IV+  K   H   E+ IL++++ PF 
Sbjct: 31 LKILSKAKIVK-LKQVEHVLNEKRILQSIRHPFL 63

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 32  PFTADNRKKTIEKIL--RGKLILPP--YLTPDARELIRKLLK-RQVAQRLGSGPNDGEAV 86
           PF AD+   T  KI+  +  L  P    ++  A+ LI   L  R+V  RLG   N  E +
Sbjct: 246 PFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREV--RLGR--NGVEEI 301

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
           + HPFF++  W+    R+   P  P L+ + D S FD     +  V++           L
Sbjct: 302 KQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQL 361

Query: 147 VFQGFTY 153
            F GFTY
Sbjct: 362 PFIGFTY 368

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVK-PPF 33
          MKVL+KA++V+  K   HT+ ERN+LE V+  PF
Sbjct: 33 MKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPF 66

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 16/43 (37%), Positives = 29/43 (67%)

Query: 50  LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF 92
           L +P +++ +AR L+++LL+    +RLG+G    E ++ HPFF
Sbjct: 195 LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVK-PPF 33
          MKVL+KA+IV+  K T HT+ ER +LE ++  PF
Sbjct: 33 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 66

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 30  KPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQR 75
           K PF  +N  +   KIL+G+   +P   + + R L+  LL++   +R
Sbjct: 200 KHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEER 246

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 12/70 (17%)

Query: 30  KPPF---TADNRKKTIEKILRGKLILPPYLT----PDARELIRKLLKRQVAQRLGSGPND 82
           KPPF      ++ + I +IL   L            +A++LI+K L +  ++R  +    
Sbjct: 196 KPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTA---- 251

Query: 83  GEAVRVHPFF 92
            E +  HP+F
Sbjct: 252 -EEILQHPWF 260

Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
KOG0694|consensus	694		99.97
KOG0696|consensus	683		99.96
KOG0690|consensus	516		99.95
KOG0598|consensus	357		99.95
KOG0605|consensus	550		99.95
KOG0616|consensus	355		99.93
KOG0612|consensus	1317		99.91
KOG0695|consensus	593		99.91
KOG0610|consensus	459		99.88
KOG0614|consensus	732		99.83
KOG0608|consensus	1034		99.82
KOG0986|consensus	591		99.77
KOG0603|consensus	612		99.75
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.71
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.71
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.7
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.7
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.68
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.67
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.67
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.67
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.66
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.65
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.64
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.64
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.64
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.63
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.62
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.6
KOG0592|consensus	604		99.59
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.59
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.59
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.59
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.59
KOG0606|consensus	1205		99.57
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.57
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.56
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.56
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.55
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.55
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.54
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.53
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.51
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.49
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.48
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.48
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.48
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.46
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.45
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.45
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.44
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.43
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.4
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.39
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.38
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.33
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.28
KOG0033|consensus	355		99.27
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.27
KOG0588|consensus	786		99.27
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.24
KOG0575|consensus	592		99.23
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.21
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.16
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.15
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.13
KOG0615|consensus	475		99.09
KOG0606|consensus	1205		99.06
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.06
KOG0580|consensus	281		99.06
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.06
KOG4717|consensus	864		99.05
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.03
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.01
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.01
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.01
smart00133	64	S_TK_X Extension to Ser/Thr-type protein kinases.	98.99
KOG0604|consensus	400		98.99
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.99
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.99
KOG0583|consensus	370		98.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.95
KOG0603|consensus	612		98.89
KOG0607|consensus	463		98.87
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.86
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.85
KOG0032|consensus	382		98.84
KOG0585|consensus	576		98.83
KOG0599|consensus	411		98.82
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.77
KOG0597|consensus	808		98.76
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.68
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.66
PTZ00036	440	glycogen synthase kinase; Provisional	98.64
KOG0578|consensus	550		98.59
KOG0581|consensus	364		98.59
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.42
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.42
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.4
PTZ00284	467	protein kinase; Provisional	98.4
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.36
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.34
KOG0198|consensus	313		98.31
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.3
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.29
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.28
PF00433	48	Pkinase_C: Protein kinase C terminal domain; Inter	98.28
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.27
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.27
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.24
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.22
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.18
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.18
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.18
KOG0660|consensus	359		98.18
PHA03207	392	serine/threonine kinase US3; Provisional	98.16
KOG0593|consensus	396		98.14
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.13
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.11
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.11
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.11
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.09
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.08
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.07
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.07
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.06
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.05
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.05
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.04
KOG0586|consensus	596		98.03
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.03
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.03
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.03
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.03
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.02
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.02
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.02
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.02
KOG4279|consensus	1226		98.01
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.01
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.0
KOG4645|consensus	1509		98.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.99
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.99
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	97.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.95
PLN00009	294	cyclin-dependent kinase A; Provisional	97.93
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.92
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.91
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	97.91
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	97.91
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.9
PTZ00283	496	serine/threonine protein kinase; Provisional	97.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.9
PLN00034	353	mitogen-activated protein kinase kinase; Provision	97.88
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.88
PTZ00267	478	NIMA-related protein kinase; Provisional	97.88
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	97.88
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.87
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	97.87
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	97.86
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	97.86
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.86
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	97.86
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.86
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	97.85
PTZ00024	335	cyclin-dependent protein kinase; Provisional	97.83
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	97.83
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	97.82
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.82
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	97.81
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	97.81
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	97.81
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	97.8
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.8
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	97.8
KOG0663|consensus	419		97.79
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	97.79
KOG0201|consensus	467		97.79
KOG0600|consensus	560		97.78
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	97.77
KOG0611|consensus	668		97.77
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	97.76
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.76
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	97.75
KOG0582|consensus	516		97.75
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	97.75
KOG0658|consensus	364		97.75
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	97.75
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	97.74
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.74
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	97.74
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.74
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.73
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.73
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	97.73
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	97.73
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	97.72
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	97.72
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	97.72
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	97.72
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	97.71
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.7
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	97.68
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.67
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	97.67
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.66
KOG0579|consensus	1187		97.66
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	97.66
PHA03212	391	serine/threonine kinase US3; Provisional	97.66
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.65
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.64
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	97.63
KOG4236|consensus	888		97.63
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	97.63
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.62
PHA02988	283	hypothetical protein; Provisional	97.62
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	97.62
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	97.61
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	97.61
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	97.59
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	97.58
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	97.58
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.58
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	97.57
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	97.57
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	97.57
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	97.55
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	97.55
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	97.54
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	97.54
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	97.54
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	97.53
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.53
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	97.52
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	97.52
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	97.51
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	97.51
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	97.51
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	97.5
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	97.5
PTZ00266	1021	NIMA-related protein kinase; Provisional	97.49
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	97.49
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.48
PHA03210	501	serine/threonine kinase US3; Provisional	97.47
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.46
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.45
KOG0595|consensus	429		97.42
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	97.42
PHA03209	357	serine/threonine kinase US3; Provisional	97.39
KOG0671|consensus	415		97.33
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.29
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	97.21
PHA03211	461	serine/threonine kinase US3; Provisional	97.19
KOG0591|consensus	375		97.16
KOG0659|consensus	318		97.16
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	97.13
KOG0596|consensus	677		97.11
KOG0589|consensus	426		97.1
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	97.09
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	97.09
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	97.09
KOG0667|consensus	586		97.09
KOG0661|consensus	538		97.05
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	97.02
KOG0574|consensus	502		97.01
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	97.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	96.97
KOG0594|consensus	323		96.96
KOG0983|consensus	391		96.95
KOG1027|consensus	903		96.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	96.89
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	96.87
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	96.84
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	96.84
KOG0665|consensus	369		96.84
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	96.79
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	96.79
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	96.75
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	96.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	96.7
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	96.69
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	96.65
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	96.64
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	96.61
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	96.6
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	96.59
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	96.59
KOG0669|consensus	376		96.58
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	96.58
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.57
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.56
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	96.55
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	96.54
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	96.51
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	96.5
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	96.49
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	96.47
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	96.47
KOG0670|consensus	752		96.45
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	96.44
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	96.44
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	96.43
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	96.43
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	96.42
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	96.41
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	96.39
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	96.39
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	96.38
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	96.38
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	96.37
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	96.33
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.33
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	96.32
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	96.29
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	96.28
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	96.28
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	96.25
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	96.24
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	96.21
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	96.19
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	96.17
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	96.16
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	96.12
KOG1290|consensus	590		96.11
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	96.08
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	96.07
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	96.04
KOG0192|consensus	362		96.03
KOG0666|consensus	438		96.02
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	96.01
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	96.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	95.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	95.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	95.84
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	95.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	95.82
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	95.76
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	95.72
KOG0584|consensus	632		95.7
KOG0662|consensus	292		95.67
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	95.63
PLN00181	793	protein SPA1-RELATED; Provisional	95.62
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	95.54
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	95.46
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.39
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	95.33
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	95.26
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	95.15
PHA02882	294	putative serine/threonine kinase; Provisional	95.14
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	95.13
KOG0668|consensus	338		94.91
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.73
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	94.69
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	94.4
KOG0590|consensus	601		94.4
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	94.22
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.19
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	94.14
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	93.84
KOG4721|consensus	904		93.74
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	93.59
KOG0577|consensus	948		93.45
KOG1167|consensus	418		93.36
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	92.86
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	92.69
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	92.39
KOG2345|consensus	302		91.8
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	91.68
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	91.58
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	90.77
KOG1151|consensus	775		90.59
KOG1989|consensus	738		90.5
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	90.44
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	90.25
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	90.23
KOG1006|consensus	361		88.31
KOG1035|consensus	1351		86.31
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	85.8
KOG0587|consensus	953		85.67
KOG1026|consensus	774		83.64
KOG0197|consensus	468		82.74
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	82.6
KOG0193|consensus	678		82.28
KOG4158|consensus	598		80.52

>KOG0694|consensus

Probab=99.97  E-value=1.4e-31  Score=257.80  Aligned_cols=148  Identities=34%  Similarity=0.720  Sum_probs=138.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -||+.+   ..|+.+|||        +||.|.+||.+++..++|+.|++..+.||.++|.++.+++++||.++|.+|||+
T Consensus       537 PEil~e---~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  537 PEVLTE---QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hhhhcc---CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            378885   689999998        999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc-cccccccCCCccCeeeeCch
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE-SLLSESANLVFQGFTYVAPS  157 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~-~~~~~~~~~~F~gFsy~~~~  157 (258)
                      +++|+++|+.||||++|||++|++|+++|||+|.+++..|++|||++|+.+.+..++.+ ..+....+..|.||+|+++.
T Consensus       614 ~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~p~Lt~~~~~~l~~~~q~~F~~Fs~~~~~  693 (694)
T KOG0694|consen  614 GERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEKPALTPSDPRPLTEEEQEAFRDFSFVAEW  693 (694)
T ss_pred             CCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcccchhhhcCCCccCCCCccccchhhHHHhcCccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999644 44566778899999999875

>KOG0696|consensus

Probab=99.96  E-value=1.4e-29  Score=233.04  Aligned_cols=152  Identities=29%  Similarity=0.595  Sum_probs=141.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|||.   |+.|+++|||        +||+|.+||.+++..++|+.|+...+.||..+|.+|.+++++||.+.|.+|||+
T Consensus       519 PEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  519 PEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             cceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCC
Confidence            48999   8999999998        999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccc-cccCCCccCeeeeCch
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLS-ESANLVFQGFTYVAPS  157 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~-~~~~~~F~gFsy~~~~  157 (258)
                      ++.|-.+|+.||||+.|||+++..++++|||+|.++-..|++|||..|+++.+..+|.+..+. ...+..|.||+|++|.
T Consensus       596 g~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~Ft~~~~~lTPpD~~v~~nldq~eF~gFsfvNpe  675 (683)
T KOG0696|consen  596 GPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFFTREPTDLTPPDKLVMMNLDQSEFEGFSFVNPE  675 (683)
T ss_pred             CCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhhhhHHHhcCCCCCCCchHHHHhcCchhhcCceeeeChh
Confidence            999999999999999999999999999999999998888999999999999999999886443 3356689999999999


Q ss_pred             HHHh
Q psy1025         158 VLEE  161 (258)
Q Consensus       158 ~~~~  161 (258)
                      ++..
T Consensus       676 fv~~  679 (683)
T KOG0696|consen  676 FVKP  679 (683)
T ss_pred             hcCC
Confidence            8643

>KOG0690|consensus

Probab=99.95  E-value=5.4e-29  Score=223.66  Aligned_cols=148  Identities=32%  Similarity=0.586  Sum_probs=134.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|||.+   ..|+.+|||        +|.||+.||+..+...+|..|+...+.||..+|++|+.|+.+||.+||.+|||.
T Consensus       337 PEVleD---nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  337 PEVLED---NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             chhhcc---ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCC
Confidence            366663   579999998        899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-----cccccCCCccCeee
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-----LSESANLVFQGFTY  153 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-----~~~~~~~~F~gFsy  153 (258)
                      ++.++.+|++|+||.+|||+.++.+++.|||+|++.++.|+++||++|+.+....+|++..     ..+..+..|..|+|
T Consensus       414 GpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT~q~v~lTPP~r~~~~~~~~~e~~~~FpQFsy  493 (516)
T KOG0690|consen  414 GPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFTSQPVTLTPPDRYGSTVDEDEERRPHFPQFSY  493 (516)
T ss_pred             CchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhhcceeEecCCCCCCcccchhhhhccCCcceee
Confidence            9999999999999999999999999999999999999999999999999999999887642     22334568999999


Q ss_pred             eCch
Q psy1025         154 VAPS  157 (258)
Q Consensus       154 ~~~~  157 (258)
                      -+..
T Consensus       494 ~~~~  497 (516)
T KOG0690|consen  494 SASM  497 (516)
T ss_pred             ecch
Confidence            7654

>KOG0598|consensus

Probab=99.95  E-value=2.5e-28  Score=221.51  Aligned_cols=145  Identities=48%  Similarity=0.812  Sum_probs=129.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ||+++   .||+++|||        +||+|.|||++.+...++++|+..+ +.+|..+|.++++||++||.+||.+||| 
T Consensus       195 Eil~~---~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg-  270 (357)
T KOG0598|consen  195 EILLG---KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLG-  270 (357)
T ss_pred             HHHhc---CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcC-
Confidence            88884   699999998        9999999999999999999999999 4556679999999999999999999999 


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc--------cccccccCCCccC
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE--------SLLSESANLVFQG  150 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~--------~~~~~~~~~~F~g  150 (258)
                      +..|+++|++||||.+|||+.|.++++.|||+|.+.+..|+++||.+|+...+..++..        ..........|.|
T Consensus       271 ~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~~~~Fd~eft~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g  350 (357)
T KOG0598|consen  271 GPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLEDTSNFDNEFTSYTVDYSPVDSSPDMSAFTAFSRTYNKIFPG  350 (357)
T ss_pred             CCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCccccccccHHHHhccccCCccccCcccccccccccccccccCC
Confidence            46789999999999999999999999999999999999999999999999866655543        1234455678999


Q ss_pred             eeeeCc
Q psy1025         151 FTYVAP  156 (258)
Q Consensus       151 Fsy~~~  156 (258)
                      |+|+.+
T Consensus       351 ft~~~~  356 (357)
T KOG0598|consen  351 FTYVAS  356 (357)
T ss_pred             ccccCC
Confidence            999875

>KOG0605|consensus

Probab=99.95  E-value=4.5e-28  Score=228.34  Aligned_cols=148  Identities=28%  Similarity=0.535  Sum_probs=123.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |||.|   +||+..|||        |||.|.|||+++++.+++.+|+++.  +.+|.  .++.+|+|||.+||+ ||.+|
T Consensus       358 EVll~---kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~R  433 (550)
T KOG0605|consen  358 EVLLG---KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENR  433 (550)
T ss_pred             HHHhc---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHh
Confidence            89995   799999998        9999999999999999999999987  77886  579999999999999 99999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc-----ccc-------cc
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-----LLS-------ES  143 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~-----~~~-------~~  143 (258)
                      ||.  +|++|||+||||++|||+.|  ++.+|||+|++.++.|+.||| .|..+.........     ...       ..
T Consensus       434 LG~--~G~~EIK~HPfF~~v~W~~l--~~~~apfvP~v~~~~DT~yFd-dF~e~~~~~~~~~~~~~~~k~~~~~~~~~~~  508 (550)
T KOG0605|consen  434 LGS--KGAEEIKKHPFFKGVDWDHL--REMPAPFVPQVNSELDTQYFD-DFPEEDSMTPTADKSGPSRKMLSMVDTNNSS  508 (550)
T ss_pred             cCc--ccHHHHhcCCccccCCcchh--hcCCCCCCCCCCCcccccccc-cCcccccCcccccccccchhhhhcccccCCc
Confidence            995  89999999999999999999  677799999999999999999 46654332221111     111       13


Q ss_pred             cCCCccCeeeeCchHHHhhhc
Q psy1025         144 ANLVFQGFTYVAPSVLEEMHH  164 (258)
Q Consensus       144 ~~~~F~gFsy~~~~~~~~~~~  164 (258)
                      .+..|.||||.+...+...+.
T Consensus       509 ~~~~FvgfTyk~~~~~~~~~~  529 (550)
T KOG0605|consen  509 KDINFVGFTYKNFDGLNKANS  529 (550)
T ss_pred             ccccccceeeecccccccccc
Confidence            345799999999887665544

>KOG0616|consensus

Probab=99.93  E-value=2.2e-26  Score=204.29  Aligned_cols=119  Identities=37%  Similarity=0.704  Sum_probs=112.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|||+   .+||+++|||        +|++|.|||++.++..+|++|+.+++.||.+++.+++|||++||++|-.+|+|.
T Consensus       210 PEii~---sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gn  286 (355)
T KOG0616|consen  210 PEIIQ---SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGN  286 (355)
T ss_pred             hHHhh---cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcC
Confidence            38888   4899999998        999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcC-cCCCCCCCCCCChhccc
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP-SLTGEDDVSQFDTKFTR  128 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P-~~~~~~D~s~Fd~~f~~  128 (258)
                      ..+|..+||.||||++++|++++.|+++|||+| .+....|+++||...+.
T Consensus       287 lknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~  337 (355)
T KOG0616|consen  287 LKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEE  337 (355)
T ss_pred             cCCCccccccCcccccccHHHHhhccccCCCCCccccCCcccccccccccc
Confidence            889999999999999999999999999999998 78889999999976443

>KOG0612|consensus

Probab=99.91  E-value=5.9e-25  Score=220.79  Aligned_cols=145  Identities=30%  Similarity=0.477  Sum_probs=121.7

Q ss_pred             ccccCCCC--CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhcccc
Q psy1025           8 SIVRNQKD--TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         8 EIi~~~~~--~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~   73 (258)
                      |||+.+..  -.|+..|||        +||+|.+||+.++..++|.+|++.  .+.||.  .+|.++++||++||+ +|.
T Consensus       246 EvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e  324 (1317)
T KOG0612|consen  246 EVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DRE  324 (1317)
T ss_pred             HHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chh
Confidence            56654422  259999998        999999999999999999999986  688994  699999999999999 899


Q ss_pred             cccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCC--ccccccccCCCccCe
Q psy1025          74 QRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPD--ESLLSESANLVFQGF  151 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~--~~~~~~~~~~~F~gF  151 (258)
                      .|||.  +|+++|+.||||.|+||+.|  |...|||+|.+.+.+|++|||..........+.+  .+....+.+.+|.||
T Consensus       325 ~RLgr--ngiedik~HpFF~g~~W~~i--R~~~pP~vPevssd~DTsnFd~~~dd~~~~e~~p~~~~~~f~Gn~LPFIGf  400 (1317)
T KOG0612|consen  325 VRLGR--NGIEDIKNHPFFEGIDWDNI--RESVPPVVPEVSSDDDTSNFDVDEDDLRDAETFPPRIPKAFSGNHLPFIGF  400 (1317)
T ss_pred             hhccc--ccHHHHHhCccccCCChhhh--hhcCCCCCCcCCCCCccccccccccccchhhccCCCCCCCCcCCcCCeeee
Confidence            99985  89999999999999999998  8999999999999999999976544443433333  334556778899999


Q ss_pred             eeeCch
Q psy1025         152 TYVAPS  157 (258)
Q Consensus       152 sy~~~~  157 (258)
                      ||+...
T Consensus       401 Ty~~~~  406 (1317)
T KOG0612|consen  401 TYTHES  406 (1317)
T ss_pred             eeccch
Confidence            998733

>KOG0695|consensus

Probab=99.91  E-value=2e-24  Score=194.98  Aligned_cols=150  Identities=26%  Similarity=0.513  Sum_probs=133.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCC--------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTA--------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKR   70 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~--------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~k   70 (258)
                      -||++|   ..|+.+|||        +|.+|+.||.-        ++..-+|+-|+..++.+|..+|-.|..+++++|.+
T Consensus       420 peilrg---eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnk  496 (593)
T KOG0695|consen  420 PEILRG---EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNK  496 (593)
T ss_pred             hhhhcc---cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcC
Confidence            489997   689999998        88899999952        23445788999999999999999999999999999


Q ss_pred             ccccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccc-cccCCCc
Q psy1025          71 QVAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLS-ESANLVF  148 (258)
Q Consensus        71 dP~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~-~~~~~~F  148 (258)
                      ||.+|||+.+ .|..+|+.|+||+.|||+.|..+.+.|||.|++.+..++.+||..|+.+.+..+|+++... .-.+..|
T Consensus       497 dp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~~fd~qft~e~~qltpdd~d~i~ridqsef  576 (593)
T KOG0695|consen  497 DPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEF  576 (593)
T ss_pred             CcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCccccccccccCCcccCCCCHHHHHhcchhhc
Confidence            9999999976 4789999999999999999999999999999999999999999999999999999876443 3456689


Q ss_pred             cCeeeeCchHH
Q psy1025         149 QGFTYVAPSVL  159 (258)
Q Consensus       149 ~gFsy~~~~~~  159 (258)
                      .||.|++|-.+
T Consensus       577 egfeyinpl~m  587 (593)
T KOG0695|consen  577 EGFEYINPLLM  587 (593)
T ss_pred             Ccceecchhhc
Confidence            99999999764

>KOG0610|consensus

Probab=99.88  E-value=1.1e-22  Score=187.30  Aligned_cols=104  Identities=31%  Similarity=0.552  Sum_probs=95.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~--~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      =|||+|   .||+.+|||        |||.|.+||.+.+..+++.+|+..++.||.  .++..|+|||++||.+||.+||
T Consensus       304 PEvI~G---~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  304 PEVIRG---EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             ceeeec---CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence            389997   699999998        999999999999999999999999999997  5899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCC
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGE  116 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~  116 (258)
                      |+ ..|+.|||+||||+||+|..+  |-..||++|.....
T Consensus       381 g~-~rGA~eIK~HpFF~gVnWaLi--r~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  381 GS-KRGAAEIKRHPFFEGVNWALI--RCARPPEIPKPVDG  417 (459)
T ss_pred             cc-ccchHHhhcCccccCCChhhe--eccCCCcCCCcccc
Confidence            97 579999999999999999944  88999999986543

>KOG0614|consensus

Probab=99.83  E-value=7.2e-21  Score=179.12  Aligned_cols=116  Identities=34%  Similarity=0.570  Sum_probs=109.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|||.|   .||..+|||        ++|+|.|||.+.++-.+|..|+++  .+.||..++..+.+||++|..-+|.+||
T Consensus       588 PEIILn---KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  588 PEIILN---KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             chhhhc---cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence            389996   799999996        899999999999999999999986  5889999999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChh
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK  125 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~  125 (258)
                      |...+|+.+|++|.||.++||+-|..+.++|||+|.+.++.|++|||..
T Consensus       665 G~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~  713 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNF  713 (732)
T ss_pred             ccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCC
Confidence            9888999999999999999999999999999999999999999999963

>KOG0608|consensus

Probab=99.82  E-value=7.2e-21  Score=182.77  Aligned_cols=142  Identities=30%  Similarity=0.456  Sum_probs=113.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|||.   ++||+..|||        +||.|++||.++++.++..+|.++.  +.||.  .+|.+|.+||.+|++ ++..
T Consensus       840 pevl~---r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~  915 (1034)
T KOG0608|consen  840 PEVLA---RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADS  915 (1034)
T ss_pred             hHHhc---ccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhh
Confidence            37888   7999999998        9999999999999999999988875  55654  699999999999877 8999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc-----cccccccCCCcc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE-----SLLSESANLVFQ  149 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~-----~~~~~~~~~~F~  149 (258)
                      |||.  +|.++||+||||++|||..|  |+..+||+|.++-+.|++|||+...+. .+....+     ..+..--...|.
T Consensus       916 RLGk--ng~d~vKaHpfFkgIDfssl--Rkq~ApYIP~ItHptDTSNFdpvdpek-lwnddses~~~~~~~nkhpehaFy  990 (1034)
T KOG0608|consen  916 RLGK--NGADQVKAHPFFKGIDFSSL--RKQRAPYIPRITHPTDTSNFDPVDPEK-LWNDDSESPNVRDTLNKHPEHAFY  990 (1034)
T ss_pred             hhcc--cchhhhhcCccccccchHhh--hhccCCcCccccCCCccccCCcCCccc-cccccccCCCcccccccCCcccee
Confidence            9985  88999999999999999996  888999999999999999999753322 2211111     111111224799


Q ss_pred             CeeeeCch
Q psy1025         150 GFTYVAPS  157 (258)
Q Consensus       150 gFsy~~~~  157 (258)
                      .|||..+-
T Consensus       991 EFTfRrFF  998 (1034)
T KOG0608|consen  991 EFTFRRFF  998 (1034)
T ss_pred             Eeeeehhc
Confidence            99997754

>KOG0986|consensus

Probab=99.77  E-value=3.3e-19  Score=166.08  Aligned_cols=114  Identities=26%  Similarity=0.467  Sum_probs=101.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |||.++  + |+.++||        +|+.|+.||...    ...++-.+|+.....||..+|++|++|++.||.+||.+|
T Consensus       356 Evl~ne--~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~R  432 (591)
T KOG0986|consen  356 EVLQNE--V-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKR  432 (591)
T ss_pred             HHHcCC--c-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHh
Confidence            888874  3 9999998        899999999643    334666788899999999999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcC-----CCCCCCCCCCh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSL-----TGEDDVSQFDT  124 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~-----~~~~D~s~Fd~  124 (258)
                      ||++..|+++|++||||+++||..|.+..++|||+|..     ++..|+.+|++
T Consensus       433 LGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DIeqFs~  486 (591)
T KOG0986|consen  433 LGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDIEQFST  486 (591)
T ss_pred             ccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccccchhhhhhhhhccc
Confidence            99988899999999999999999999999999999975     45678888873

>KOG0603|consensus

Probab=99.75  E-value=9.3e-19  Score=168.35  Aligned_cols=148  Identities=41%  Similarity=0.697  Sum_probs=133.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .||+.     ||..++||        +|++|..||..    ++..+|+..++.+|..++.++++++..|+.++|..|||.
T Consensus       162 pEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  162 PEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            45665     79999998        89999999987    788899999999999999999999999999999999999


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeeeCchH
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAPSV  158 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~~~~~  158 (258)
                      ++.|+.+|++|+||..|+|+.+..|+.+|||+|.+..+.|+.+||++|+...|..+|.-.. ..+....|.||+|+.+.+
T Consensus       233 ~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~-~~s~~~if~g~sfva~~i  311 (612)
T KOG0603|consen  233 GPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLLSA-SGSDHTIFSGPSFVAPGV  311 (612)
T ss_pred             CcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCCcccCCCCCC-CccccchhcCCCccChHH
Confidence            8899999999999999999999999999999999999999999999999999988876542 234457899999999999


Q ss_pred             HHhhhc
Q psy1025         159 LEEMHH  164 (258)
Q Consensus       159 ~~~~~~  164 (258)
                      +.+...
T Consensus       312 l~~~~~  317 (612)
T KOG0603|consen  312 LEDAVT  317 (612)
T ss_pred             hhcccc
Confidence            888443

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.71  E-value=4.5e-17  Score=147.82  Aligned_cols=145  Identities=30%  Similarity=0.606  Sum_probs=121.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||++||.+||.+|+++.
T Consensus       166 E~~~~---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~  242 (320)
T cd05590         166 EILQE---MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSL  242 (320)
T ss_pred             HHHcC---CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence            55553   456667773        8889999999999999999999999999999999999999999999999999863


Q ss_pred             C-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeC
Q psy1025          80 P-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVA  155 (258)
Q Consensus        80 ~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~  155 (258)
                      . .+.++++.||||.+++|+.+..+.+.|||.|.+.+..|.++|++++..+.+..++.+.. .....+..|.+|+|.+
T Consensus       243 ~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (320)
T cd05590         243 TLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDPVLTPIEESLLPMINQDEFRNFSYTA  320 (320)
T ss_pred             CCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCccCCCCcccccccccccCcCCCcccC
Confidence            2 34589999999999999999999999999999999999999999888887777765432 3334456899999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.71  E-value=6e-17  Score=146.90  Aligned_cols=144  Identities=27%  Similarity=0.596  Sum_probs=120.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||.+||.+||.+|+++.
T Consensus       171 E~~~~---~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05616         171 EIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCG  247 (323)
T ss_pred             HHhcC---CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCC
Confidence            66664   457777774        8899999999999999999999999999999999999999999999999999976


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc-ccccccCCCccCeeeeC
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-LLSESANLVFQGFTYVA  155 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~-~~~~~~~~~F~gFsy~~  155 (258)
                      ..+..+|++|+||..++|+.+..+.++||+.|.... .|..+|+..|....+..+|.+. ......+..|+||+|++
T Consensus       248 ~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05616         248 PEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACG-RDAENFDKFFTRHPPVLTPPDQEVIMNLDQSEFEGFSYVN  323 (323)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCC-chhhhcCchhccCCccCCCCCccccccccccccCCCcccC
Confidence            667899999999999999999999999999998754 6788888877766555555443 23333456899999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.70  E-value=6.7e-17  Score=146.65  Aligned_cols=144  Identities=38%  Similarity=0.768  Sum_probs=124.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+...++..|....+.+|..++.++.+||.+||.+||.+|++..
T Consensus       171 E~~~~---~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  247 (324)
T cd05589         171 EVLTE---TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSG  247 (324)
T ss_pred             hHhcC---CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence            56664   356667773        8899999999999999999999988899999999999999999999999999876


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc--cccccCCCccCeeee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL--LSESANLVFQGFTYV  154 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~--~~~~~~~~F~gFsy~  154 (258)
                      ...+.+|++||||.+++|+.+..+.+.||+.|.+....|.++|+.++....+..++..+.  .....+..|.+|+|+
T Consensus       248 ~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05589         248 EKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDEEFTSEAPVLTPPREPRLLTEEEQELFRGFDYV  324 (324)
T ss_pred             CCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcchhhhcCccccccccccCCCccccccchhhhcccCCcccC
Confidence            667899999999999999999989999999999999999999999888887777765543  556678899999985

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.70  E-value=9.9e-17  Score=145.63  Aligned_cols=146  Identities=36%  Similarity=0.612  Sum_probs=122.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||.+||.+||.+|++.
T Consensus       164 PE~~~~---~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (323)
T cd05571         164 PEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG  240 (323)
T ss_pred             hhhhcC---CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            366664   457777773        889999999999999999999999999999999999999999999999999976


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-----ccccCCCccCeee
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-----SESANLVFQGFTY  153 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-----~~~~~~~F~gFsy  153 (258)
                      ....+.+|++||||.+++|+.+..+.+.||+.|.+....|+.+|+.+++......+|.....     .......|.+|+|
T Consensus       241 ~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  320 (323)
T cd05571         241 GPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDRYDSLGLLQLEERPHFPQFSY  320 (323)
T ss_pred             CCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCcccCCCCcccccccccccccccCCCCee
Confidence            55568999999999999999999999999999999999999999988887766655544321     1234557999999


Q ss_pred             eC
Q psy1025         154 VA  155 (258)
Q Consensus       154 ~~  155 (258)
                      .+
T Consensus       321 ~~  322 (323)
T cd05571         321 SA  322 (323)
T ss_pred             eC
Confidence            75

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.68  E-value=2.5e-16  Score=142.88  Aligned_cols=145  Identities=32%  Similarity=0.642  Sum_probs=121.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|++||.+.+...++..|....+.+|..++.++++||.+||.+||.+|++..
T Consensus       171 E~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (324)
T cd05587         171 EIIAY---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCG  247 (324)
T ss_pred             hhhcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            56664   356777773        8899999999999999999999999999999999999999999999999999875


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeeeeC
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTYVA  155 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy~~  155 (258)
                      ....++|++||||..++|..+..+.+.+|+.|.+....+.++|+..+.......++.+... ....+..|++|+|++
T Consensus       248 ~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05587         248 PTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPPDKLVIANIDQSEFQGFSFVN  324 (324)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcchhhhcCcccccCccccCCCCccccccccccccCCCcccC
Confidence            5566899999999999999999999999999999888899999988776655555554332 233456899999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.67  E-value=2.9e-16  Score=142.66  Aligned_cols=145  Identities=30%  Similarity=0.641  Sum_probs=118.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|++.+   ..|+..+|+        +|++|.+||.+.+...++..|+...+.+|..++.++++||.+||.++|.+|++.
T Consensus       170 PE~~~~---~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         170 PEIIAY---QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHcC---CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            366664   457777773        889999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeC
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVA  155 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~  155 (258)
                      ...+.++|++||||..++|..+..+.+.+|+.|..... +..+|+..++...+...+.... +.......|.+|+|++
T Consensus       247 ~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05615         247 GPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLTPPDQLVIANIDQADFEGFSYVN  323 (323)
T ss_pred             CCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCccCCC-chhhcCccccccCCCCCCCcccccccccccccCCCcccC
Confidence            55667899999999999999999999999999986553 5788988887665555543332 2233445899999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.67  E-value=2.7e-16  Score=142.46  Aligned_cols=145  Identities=30%  Similarity=0.659  Sum_probs=123.5

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|++.+   ..|+..+|        |+|++|..||.+.+...++..|....+.+|..++.++++||.+||.+||.+|+++
T Consensus       165 PE~~~~---~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         165 PEILSY---QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             HHHhcC---CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCC
Confidence            356664   34566666        2888999999999998999999998899999999999999999999999999986


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc-ccccccCCCccCeeee
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-LLSESANLVFQGFTYV  154 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~-~~~~~~~~~F~gFsy~  154 (258)
                      ......+++.||||..++|+.+..+.+.||+.|.+....+.++|+..|....+..++.+. .+.+..+..|+||+|+
T Consensus       242 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (318)
T cd05570         242 LPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEFRGFSYI  318 (318)
T ss_pred             CCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCchhccCcccCCCCcccccccccccccCCCCCC
Confidence            555568999999999999999999999999999999999999999999888887776553 4445566789999995

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.67  E-value=4.1e-16  Score=141.60  Aligned_cols=146  Identities=65%  Similarity=1.079  Sum_probs=126.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|        |+|++|.+||.+.+....+..|+...+.+|..++.++++||.+||.+||.+|++..
T Consensus       170 E~~~~---~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  246 (323)
T cd05584         170 EILMR---SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAG  246 (323)
T ss_pred             hhccC---CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCC
Confidence            55553   35666677        38899999999999999999999999999999999999999999999999999766


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeeeCc
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAP  156 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~~~  156 (258)
                      ...+++++.||||..++|+.+..+.+.+|+.+......|.+.|+..++...+..++.+..........|.||+|.++
T Consensus       247 ~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05584         247 PGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQIFLGFTYVAP  323 (323)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCchhcccccccCccccccccccccCcCCCeecCC
Confidence            66789999999999999999999999999999998888999999988888888777776666666788999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.66  E-value=4e-16  Score=141.38  Aligned_cols=145  Identities=30%  Similarity=0.636  Sum_probs=120.8

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|        |+|++|.+||.+.+...++..|....+.+|..++.++++||.+||.+||.+|+++.
T Consensus       166 E~~~~---~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~  242 (321)
T cd05591         166 EILQE---LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCV  242 (321)
T ss_pred             HHHcC---CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence            55554   35666677        38899999999999999999999999999999999999999999999999999763


Q ss_pred             CC--CchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeeeeC
Q psy1025          80 PN--DGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTYVA  155 (258)
Q Consensus        80 ~~--g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy~~  155 (258)
                      ..  .+++|++||||.+++|..+..+.+.+||.|......+..+|+..++...+...+..+.+ ....+..|.||+|.+
T Consensus       243 ~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (321)
T cd05591         243 ASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEPVLTPVDPAVIKQINQEEFRGFSFFN  321 (321)
T ss_pred             CCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhhcCCccccCccccCCCCccccccccccccCCCcccC
Confidence            32  57899999999999999999999999999999888889999988887777777654433 333456699999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.65  E-value=7.4e-16  Score=139.76  Aligned_cols=142  Identities=28%  Similarity=0.584  Sum_probs=119.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||.+||.+||.+|++. 
T Consensus       166 E~~~~---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~-  241 (316)
T cd05619         166 EILLG---QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGV-  241 (316)
T ss_pred             HHHcC---CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCC-
Confidence            66664   356777773        888999999999998998888888888888999999999999999999999986 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeCc
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVAP  156 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~~  156 (258)
                         .++|+.||||..++|..+..+.++||+.|.+.+..+.++|+.++....+..+..+.. +.+..+..|++|+|.+|
T Consensus       242 ---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05619         242 ---KGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKPRLSVTDRMLINSMDQNMFENFSFINP  316 (316)
T ss_pred             ---hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcChhhhcCCcccCCCcccccccccccccCCCcccCc
Confidence               359999999999999999889999999999999999999999998877666554432 33445567999999765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.64  E-value=7.9e-16  Score=140.06  Aligned_cols=146  Identities=27%  Similarity=0.533  Sum_probs=115.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCC-------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTA-------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~-------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kd   71 (258)
                      -|++.+   ..|+..+|+        +|++|.+||..       .....++..+....+.+|..++..+++||.+||.+|
T Consensus       165 PE~~~~---~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~d  241 (327)
T cd05617         165 PEILRG---EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKD  241 (327)
T ss_pred             HHHHCC---CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccC
Confidence            366664   356666663        88899999953       233456677777888899999999999999999999


Q ss_pred             cccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccccc-ccCCCcc
Q psy1025          72 VAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE-SANLVFQ  149 (258)
Q Consensus        72 P~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~-~~~~~F~  149 (258)
                      |.+|+++.+ .++++|+.||||.+++|+.+..+.+.|||.|.+....+.++|+..+..+....++.+..... .....|.
T Consensus       242 P~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (327)
T cd05617         242 PKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDDYGLENFDTQFTSEPVQLTPDDEDVIKRIDQSEFE  321 (327)
T ss_pred             HHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCCcchhhcCCccccCcccCCCCCccccccccccccC
Confidence            999998632 35789999999999999999999999999999998889999998887776666665543322 3345799


Q ss_pred             CeeeeC
Q psy1025         150 GFTYVA  155 (258)
Q Consensus       150 gFsy~~  155 (258)
                      ||.|++
T Consensus       322 ~~~~~~  327 (327)
T cd05617         322 GFEYIN  327 (327)
T ss_pred             CCcCCC
Confidence            998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.64  E-value=8e-16  Score=139.37  Aligned_cols=143  Identities=29%  Similarity=0.576  Sum_probs=120.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|++.+   ..|+..+|+        +|++|..||.+.+...++..|....+.+|..++.++++||.+||.+||.+|++.
T Consensus       165 PE~~~~---~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~  241 (316)
T cd05620         165 PEILQG---LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGV  241 (316)
T ss_pred             HHHHcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            366664   456777773        888999999999999999999888888899999999999999999999999985


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeeeeCc
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTYVAP  156 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy~~~  156 (258)
                          .++|++||||.+++|..+..+.+.+|+.|......+.++|+.++..+.+..+...... ....+..|.||+|.+|
T Consensus       242 ----~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05620         242 ----VGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLSEKPRLSYSDKNLIDSMDQSAFAGFSFINP  316 (316)
T ss_pred             ----hHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCccccccCcccCCCcccccccccccCcCCCcccCC
Confidence                4689999999999999998899999999999999999999998887766666544333 2334568999999775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.64  E-value=1.1e-15  Score=139.33  Aligned_cols=146  Identities=34%  Similarity=0.595  Sum_probs=120.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||++||.+||.+|++..
T Consensus       165 E~~~~---~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  241 (328)
T cd05593         165 EVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGG  241 (328)
T ss_pred             hhhcC---CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            56654   356777773        8889999999988888888898888999999999999999999999999999876


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc-------ccccccCCCccCee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-------LLSESANLVFQGFT  152 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~-------~~~~~~~~~F~gFs  152 (258)
                      +..+.+|++|+||.+++|..+..+.+.||+.|.+.+..+..+|+.+|+.+.....++..       .........|.+|+
T Consensus       242 ~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (328)
T cd05593         242 PDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEKYDEDGMDCMDNERRPHFPQFS  321 (328)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCcccccCCcccCCccccccccccccccccccccCCce
Confidence            66789999999999999999999999999999999999999999998877655444432       11222345799999


Q ss_pred             eeCc
Q psy1025         153 YVAP  156 (258)
Q Consensus       153 y~~~  156 (258)
                      |...
T Consensus       322 ~~~~  325 (328)
T cd05593         322 YSAS  325 (328)
T ss_pred             eeCC
Confidence            9654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.63  E-value=1.2e-15  Score=138.15  Aligned_cols=142  Identities=28%  Similarity=0.604  Sum_probs=121.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|..||.+.+...++..|......+|..++.++++||.+||.+||.+|++. 
T Consensus       166 E~~~~---~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~-  241 (316)
T cd05592         166 EILKG---QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGV-  241 (316)
T ss_pred             HHHcC---CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCC-
Confidence            55554   346666662        888999999999999999999888888899999999999999999999999985 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeCc
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVAP  156 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~~  156 (258)
                         ..+++.||||..++|..+..+.+.|||.|......+..+|+.+|+.+....++.+.. .....+..|.+|.|.+|
T Consensus       242 ---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05592         242 ---DGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKVRLSPVDKKLLASMDQEQFRGFSFTNP  316 (316)
T ss_pred             ---hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccccccCCCccccccccccccccCCCcccCc
Confidence               468999999999999999989999999999999899999999999888777776543 33445678999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.6e-15  Score=136.90  Aligned_cols=141  Identities=35%  Similarity=0.645  Sum_probs=119.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|        |+|++|.+||.+.+...++..|+...+.+|..++.++++||.+||..||.+|++. 
T Consensus       163 E~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~-  238 (312)
T cd05585         163 ELLLG---HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGY-  238 (312)
T ss_pred             HHHcC---CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCC-
Confidence            55554   45677777        3889999999999999999999999999999999999999999999999999975 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc-cccccccCCCccCeee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE-SLLSESANLVFQGFTY  153 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~-~~~~~~~~~~F~gFsy  153 (258)
                       ..+.+++.||||..++|..+..+.+.+++.|.+.+..++++|+++++...+..+... ....+..+..|.+|+|
T Consensus       239 -~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (312)
T cd05585         239 -NGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFTREKPIDSVVDDSHLSETVQQQFGGWSY  312 (312)
T ss_pred             -CCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCccccccccccCCCccccccchhccccCCCCC
Confidence             467999999999999999999999999999999988999999998887766555433 2344555678999987

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.60  E-value=5.7e-15  Score=134.06  Aligned_cols=145  Identities=31%  Similarity=0.540  Sum_probs=117.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+..+++..++...+.++..++.++.+||++||.++|.+|++. 
T Consensus       166 E~~~~---~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~-  241 (325)
T cd05604         166 EVIRK---QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGA-  241 (325)
T ss_pred             HHHcC---CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCC-
Confidence            56664   356667773        889999999999999999999998888888899999999999999999999986 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc----c---ccccccCCCccCee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE----S---LLSESANLVFQGFT  152 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~----~---~~~~~~~~~F~gFs  152 (258)
                      .....+|+.||||.+++|..+..+.+++|+.|.+....|.++|+..+..+....+...    .   ......+..|.||+
T Consensus       242 ~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (325)
T cd05604         242 KEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDAVFTEETVPYSVCFSSDYSIVNASVLEADDAFVGFS  321 (325)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCCccccCCcccCcccccccccccccccccccccCCCE
Confidence            2456899999999999999999889999999999888899999987766543333211    1   11233467899999


Q ss_pred             eeCc
Q psy1025         153 YVAP  156 (258)
Q Consensus       153 y~~~  156 (258)
                      |..|
T Consensus       322 ~~~~  325 (325)
T cd05604         322 YAPP  325 (325)
T ss_pred             ecCC
Confidence            9754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0592|consensus

Probab=99.59  E-value=1.4e-15  Score=144.47  Aligned_cols=82  Identities=34%  Similarity=0.637  Sum_probs=73.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCC
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRK  104 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~  104 (258)
                      .||+|.|||.+.|.-.+|++|+...+.||+.+++.++|||++||.+||..|||+     ++||+||||.+|||+.|- ..
T Consensus       279 QmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-----~qIk~HpFF~~Vdw~nlw-~~  352 (604)
T KOG0592|consen  279 QMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTS-----QQIKAHPFFEGVDWENLW-QQ  352 (604)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccH-----HHHhhCcccccCChhhhh-hc
Confidence            899999999999999999999999999999999999999999999999999986     999999999999999973 23


Q ss_pred             CCCCCcCc
Q psy1025         105 LEPPFKPS  112 (258)
Q Consensus       105 ~~pPf~P~  112 (258)
                      -+|+..|.
T Consensus       353 ~PP~l~py  360 (604)
T KOG0592|consen  353 TPPKLQPY  360 (604)
T ss_pred             CCCcccCC
Confidence            33444443

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.59  E-value=5.1e-15  Score=134.82  Aligned_cols=145  Identities=26%  Similarity=0.540  Sum_probs=115.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA---------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKR   70 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~k   70 (258)
                      |++.+   ..|+..+|+        +|++|++||..         .....++..|....+.+|..++.++++||.+||.+
T Consensus       166 E~~~~---~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~  242 (329)
T cd05588         166 EILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNK  242 (329)
T ss_pred             HHHcC---CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcc
Confidence            66664   356667773        88899999953         12234566788888899999999999999999999


Q ss_pred             ccccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCc
Q psy1025          71 QVAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVF  148 (258)
Q Consensus        71 dP~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F  148 (258)
                      ||.+|+++.. .++++|++||||..++|+.+..+.+.||+.|.+....+..+|+..+..+....+|..+.. ....+..|
T Consensus       243 dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  322 (329)
T cd05588         243 DPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDPDVIARIDQSEF  322 (329)
T ss_pred             CHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccCCCcchhhhcCCccccCccccCCCCcccccccccccc
Confidence            9999998532 247899999999999999998888999999999888899999988887777666655433 33345689


Q ss_pred             cCeeeeC
Q psy1025         149 QGFTYVA  155 (258)
Q Consensus       149 ~gFsy~~  155 (258)
                      .||.|.+
T Consensus       323 ~~~~~~~  329 (329)
T cd05588         323 EGFEYIN  329 (329)
T ss_pred             CCCcccC
Confidence            9999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.59  E-value=7e-15  Score=133.63  Aligned_cols=145  Identities=36%  Similarity=0.598  Sum_probs=119.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|.        +|++|..||...+...++..|....+.+|..+++++++||.+||.+||.+|++.+
T Consensus       165 E~~~~---~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  241 (323)
T cd05595         165 EVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGG  241 (323)
T ss_pred             ccccC---CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCC
Confidence            56654   356666773        8889999999999999999998888999999999999999999999999999876


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccc-----cccCCCccCeeee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLS-----ESANLVFQGFTYV  154 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~-----~~~~~~F~gFsy~  154 (258)
                      +..+.++++|+||.+++|..+..+.+.||+.|.+.+..+...|+.+++.......|.+....     ...-..|.+|||.
T Consensus       242 ~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (323)
T cd05595         242 PSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRTHFPQFSYS  321 (323)
T ss_pred             CCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcccccCCccCCCCcccccccccccccccccCCCccc
Confidence            66789999999999999999998889999999999999999999998887665555432111     1112379999986


Q ss_pred             C
Q psy1025         155 A  155 (258)
Q Consensus       155 ~  155 (258)
                      .
T Consensus       322 ~  322 (323)
T cd05595         322 A  322 (323)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.59  E-value=6.8e-15  Score=133.43  Aligned_cols=143  Identities=31%  Similarity=0.583  Sum_probs=116.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|+...+.++..++.++.+||.+||.+||.+|++..
T Consensus       166 E~~~~---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         166 EVLRK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             hhhcC---CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            56664   356667773        8899999999999999999999998888888999999999999999999999863


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc---cc----cccccCCCccCee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE---SL----LSESANLVFQGFT  152 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~---~~----~~~~~~~~F~gFs  152 (258)
                       ....+|+.||||..++|+.+..+.+.+|+.|.+....+...|+.++.......+...   ..    .....+..|.||+
T Consensus       243 -~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (323)
T cd05575         243 -DDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPEFTEEPVPNSVGKSPDSVLVSASVKEADDAFLGFS  321 (323)
T ss_pred             -CCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCccccccccccccCCCcccccccccccccccccCCCc
Confidence             456899999999999999999999999999999888889999987776544333221   11    1234567899999


Q ss_pred             ee
Q psy1025         153 YV  154 (258)
Q Consensus       153 y~  154 (258)
                      |.
T Consensus       322 ~~  323 (323)
T cd05575         322 YA  323 (323)
T ss_pred             cC
Confidence            84

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.59  E-value=5.8e-15  Score=135.61  Aligned_cols=115  Identities=30%  Similarity=0.572  Sum_probs=101.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||++||..||.+|++..
T Consensus       198 E~~~~---~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~  274 (340)
T PTZ00426        198 EILLN---VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNL  274 (340)
T ss_pred             HHHhC---CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCC
Confidence            66664   457777773        8899999999999999999999999999999999999999999999999999765


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK  125 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~  125 (258)
                      ..++++|++||||.+++|..+..+.+.+|++|......+.++|+..
T Consensus       275 ~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  320 (340)
T PTZ00426        275 KKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERV  320 (340)
T ss_pred             CCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCC
Confidence            5578999999999999999999999999999999888888888753

>KOG0606|consensus

Probab=99.57  E-value=2.1e-15  Score=152.11  Aligned_cols=140  Identities=28%  Similarity=0.487  Sum_probs=113.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |||.   ++||++.|||        ++|.|..||.++++.++|..++...+.||+   .+.+|+++||.+||+.+|..|+
T Consensus       228 eVil---rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  228 EVIL---RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhhh---hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            6777   6899999999        778899999999999999999999999997   4789999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeeeCc
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVAP  156 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~~~  156 (258)
                      |.  .|+-+||+|.||..+||..|+.+  +.+|+|++...+|+++||...++.....+.+.  ..+.....|..|+=-.+
T Consensus       305 gt--~ga~evk~h~ff~~LDw~~llRq--kaefvpql~~eddtsyfdTRs~Ryh~~~se~~--~~ees~~~~~qFsscs~  378 (1205)
T KOG0606|consen  305 GT--GGALEVKQHGFFQLLDWKSLLRQ--KAEFVPQLESEDDTSYFDTRSDRYHHFESEDT--GDEESSLEFRQFSSCSP  378 (1205)
T ss_pred             cc--chhhhhhhccceeecccchhhhh--hccccccccccccchhhcccchheeeccccCC--ccccccccccccccccc
Confidence            97  58899999999999999998654  45699999999999999987665533333321  11222235666664333

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.57  E-value=1.5e-14  Score=131.84  Aligned_cols=146  Identities=26%  Similarity=0.535  Sum_probs=112.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTA---------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLK   69 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~   69 (258)
                      -|++.+   ..|+..+|+        +|++|.+||..         .....++..|+...+.+|..++.++++||.+||.
T Consensus       165 PE~~~~---~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~  241 (329)
T cd05618         165 PEILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLN  241 (329)
T ss_pred             HHHHcC---CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhc
Confidence            366664   356666773        88899999952         1233456677888889999999999999999999


Q ss_pred             cccccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCC
Q psy1025          70 RQVAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLV  147 (258)
Q Consensus        70 kdP~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~  147 (258)
                      +||.+|+++.+ .++++|++||||.+++|+.+..+++.||+.|.+....+..+|++.++.+....+|.+.. ........
T Consensus       242 ~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (329)
T cd05618         242 KDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDDDDIVRKIDQSE  321 (329)
T ss_pred             CCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCCCcccchhcCcccccCCccCCCCcccccccccccc
Confidence            99999998632 35789999999999999999999999999999988888888988777765555554432 22233457


Q ss_pred             ccCeeeeC
Q psy1025         148 FQGFTYVA  155 (258)
Q Consensus       148 F~gFsy~~  155 (258)
                      |.||.|++
T Consensus       322 ~~~~~~~~  329 (329)
T cd05618         322 FEGFEYIN  329 (329)
T ss_pred             cCCCcccC
Confidence            99998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.56  E-value=1.6e-14  Score=130.53  Aligned_cols=143  Identities=40%  Similarity=0.776  Sum_probs=115.6

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+++..+|        |+|++|..||...+....+..|....+.+|..++.++++||++||.+||.+|+++.
T Consensus       168 E~~~~---~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~  244 (318)
T cd05582         168 EVVNR---RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAG  244 (318)
T ss_pred             HHHcC---CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence            55553   45666677        38889999999999989999999988999999999999999999999999999975


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      ...+++++.|+||..++|..+..+.+.||+.|......+..+++..+....+...+..+ .+...+..|.||+|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~  318 (318)
T cd05582         245 PDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFDPEFTSRTPKDSPGIP-PSANAHQLFRGFSFV  318 (318)
T ss_pred             CCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcchhhhcCcccccCccccCCCCc-cccccccccCCCEeC
Confidence            45578999999999999999999999999999887777777888777654444333222 233355689999985

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.56  E-value=1.4e-14  Score=132.01  Aligned_cols=114  Identities=30%  Similarity=0.542  Sum_probs=101.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+...++..|....+.+|..++.++++||.+||..||.+|+++.
T Consensus       185 E~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  261 (329)
T PTZ00263        185 EVIQS---KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTL  261 (329)
T ss_pred             HHHcC---CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            66664   456777773        8899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCCh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~  124 (258)
                      ...+++|+.||||.+++|+.+..+.+.+|+.+.+....++.+|+.
T Consensus       262 ~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (329)
T PTZ00263        262 KGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEK  306 (329)
T ss_pred             CCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcccchhccC
Confidence            667899999999999999999999999999888888888888874

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.55  E-value=3.4e-14  Score=129.05  Aligned_cols=145  Identities=37%  Similarity=0.728  Sum_probs=115.2

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+  ...++..+|        |+|++|..||...    ........+......+|..++..+++||.+||.+||.+|
T Consensus       176 E~~~~--~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (332)
T cd05614         176 EIIRG--KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKR  253 (332)
T ss_pred             HHhcC--CCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHc
Confidence            66664  245677777        3889999999642    344556667777788888999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeeeC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYVA  155 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~~  155 (258)
                      +++....++++++||||.+++|..+..+.+.+||.|......|..+|..++....+..++....  ......|+||+|+.
T Consensus       254 ~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  331 (332)
T cd05614         254 LGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEPVYSPAGTP--PSGARVFQGYSFVA  331 (332)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCcccCCCCCC--cccccccCCceecC
Confidence            9875557899999999999999999999999999999988888889988777666655543321  22356899999975


Q ss_pred             c
Q psy1025         156 P  156 (258)
Q Consensus       156 ~  156 (258)
                      +
T Consensus       332 ~  332 (332)
T cd05614         332 P  332 (332)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.6e-14  Score=131.26  Aligned_cols=120  Identities=30%  Similarity=0.605  Sum_probs=102.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP-YLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+  ..+|+..+|.        +|++|..||.+.+...++..|....+.+|. .++.++++||++||.+||.+|+++
T Consensus       166 E~~~~--~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         166 EVLLD--EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             HHHcC--CCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCC
Confidence            55554  2456777773        889999999999999999999988888886 479999999999999999999975


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCC
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQT  130 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~  130 (258)
                       ...++++++||||..++|+.+..+.+.+|+.|.+....+.++|+.+|+...
T Consensus       244 -~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (330)
T cd05586         244 -HRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDPEFTNSS  294 (330)
T ss_pred             -CCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcCccccccc
Confidence             235799999999999999999999999999999988889999988776654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.54  E-value=3.9e-14  Score=128.56  Aligned_cols=125  Identities=36%  Similarity=0.635  Sum_probs=108.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|.        +|++|..||.+.+...++..|....+.+|..+++++++||.+||.+||.+|++..
T Consensus       166 E~~~~---~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  242 (325)
T cd05594         166 EVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGG  242 (325)
T ss_pred             HHHcc---CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCC
Confidence            56654   356677773        8889999999999989999999889999999999999999999999999999765


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCC
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP  135 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~  135 (258)
                      +..+.+|++|+||.+++|..+..+.+.||+.|......+..+|++.++.......+
T Consensus       243 ~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (325)
T cd05594         243 PDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITP  298 (325)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCchhhcCccccCC
Confidence            55689999999999999999998889999999999989999999988876554444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.53  E-value=4.8e-14  Score=128.00  Aligned_cols=144  Identities=31%  Similarity=0.580  Sum_probs=114.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+..+++..|....+.++..++.++++||.+||++||.+|+++ 
T Consensus       166 E~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-  241 (325)
T cd05602         166 EVLHK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGA-  241 (325)
T ss_pred             HHHcC---CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCC-
Confidence            56664   356667773        889999999999999999999988888888999999999999999999999986 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc-------ccccccCCCccCee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES-------LLSESANLVFQGFT  152 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~-------~~~~~~~~~F~gFs  152 (258)
                      .....+|++|+||..++|+.+..+++.||+.|.+....++..|+..+..+....+....       .........|.||+
T Consensus       242 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  321 (325)
T cd05602         242 KDDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNSIGQSPDSILVTASVKEAAEAFLGFS  321 (325)
T ss_pred             CCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCCccccCCcccccCCCchhhhhcccccccccccCCCc
Confidence            23567999999999999999999999999999998888889998877655433222211       11122334688998


Q ss_pred             eeC
Q psy1025         153 YVA  155 (258)
Q Consensus       153 y~~  155 (258)
                      |-.
T Consensus       322 ~~~  324 (325)
T cd05602         322 YAP  324 (325)
T ss_pred             cCC
Confidence            853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=4.9e-14  Score=125.88  Aligned_cols=114  Identities=39%  Similarity=0.631  Sum_probs=102.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+++..+|+        +|++|..||.+.+...++..|....+.+|..++..+++||++||..||.+|+++.
T Consensus       168 E~~~~---~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  244 (291)
T cd05612         168 EVIQS---KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNM  244 (291)
T ss_pred             HHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCc
Confidence            66664   467778883        8889999999999999999999999999999999999999999999999999865


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCCh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~  124 (258)
                      ...+++++.||||..++|..+..+...||++|.+....|+.+|++
T Consensus       245 ~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  289 (291)
T cd05612         245 KNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDD  289 (291)
T ss_pred             cCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCccccccccC
Confidence            567899999999999999999999999999999998899999885

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.49  E-value=1.7e-13  Score=126.46  Aligned_cols=140  Identities=23%  Similarity=0.400  Sum_probs=101.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+..+|+        +|++|.+||.+.+...++.+|+..  .+.+|.  .++.++++||.+||+ ++.+|
T Consensus       206 E~~~~---~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r  281 (363)
T cd05628         206 EVFMQ---TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHR  281 (363)
T ss_pred             HHHcC---CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-Chhhc
Confidence            66664   467888884        889999999999999999999874  455665  479999999999986 78888


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCC----ccccccccCCCccCe
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPD----ESLLSESANLVFQGF  151 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~----~~~~~~~~~~~F~gF  151 (258)
                      ++.  .++++|++||||.+++|+.+..+..++|  +.+.+..|+++|+.............    ........+..|.||
T Consensus       282 ~~r--~~~~ei~~hp~f~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (363)
T cd05628         282 IGA--PGVEEIKTNPFFEGVDWEHIRERPAAIP--IEIKSIDDTSNFDEFPDSDILKPTVATSNHPETDYKNKDWVFINY  357 (363)
T ss_pred             CCC--CCHHHHhCCCCCCCCCHHHHHhCCCCCC--ccCCCcchhhccCCCCccccccccccccCCcccccCcCCcccCCc
Confidence            874  4689999999999999999976655444  35567788888885433222111111    111223345679999


Q ss_pred             eeeC
Q psy1025         152 TYVA  155 (258)
Q Consensus       152 sy~~  155 (258)
                      +|..
T Consensus       358 ~~~~  361 (363)
T cd05628         358 TYKR  361 (363)
T ss_pred             eeec
Confidence            9974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.48  E-value=1.5e-13  Score=126.54  Aligned_cols=140  Identities=25%  Similarity=0.440  Sum_probs=102.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+..+|+        +|++|.+||.+.+....+.+|+..  .+.+|.  .++.++++||.+|+. ||.+|
T Consensus       206 E~~~~---~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R  281 (360)
T cd05627         206 EVFMQ---TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENR  281 (360)
T ss_pred             HHHcC---CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-Chhhc
Confidence            66664   467788884        889999999999999999988864  355665  379999999999875 99999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCC-ccccccccCCCccCeeee
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPD-ESLLSESANLVFQGFTYV  154 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~-~~~~~~~~~~~F~gFsy~  154 (258)
                      ++.  .++++|++||||.+++|..+..+...+|+  .+.+..|+++|+............. ........+..|.+|+|.
T Consensus       282 ~~~--~~~~ei~~hp~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (360)
T cd05627         282 IGS--NGVEEIKSHPFFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESDILQPAENTIEPDYKSKDWVFLNYTYK  357 (360)
T ss_pred             CCC--CCHHHHhcCCCCCCCCHHHHhcCCCCCCc--cCCCcchhhhcCCCCcccccCCCccccccccCcCCcccCCceee
Confidence            985  56899999999999999999776655553  4667788899875322221111111 112234456789999997


Q ss_pred             C
Q psy1025         155 A  155 (258)
Q Consensus       155 ~  155 (258)
                      +
T Consensus       358 ~  358 (360)
T cd05627         358 R  358 (360)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.48  E-value=1.9e-13  Score=123.65  Aligned_cols=143  Identities=29%  Similarity=0.536  Sum_probs=113.2

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|        |+|++|.+||.+.+...++..|+...+.+|...+.++++||.+||.+||.+|++. 
T Consensus       166 E~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-  241 (321)
T cd05603         166 EVLRK---EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGA-  241 (321)
T ss_pred             HHhcC---CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCC-
Confidence            55654   34666666        3889999999999999999999999899999999999999999999999999986 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc----cccccccCCCccCeeee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE----SLLSESANLVFQGFTYV  154 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~----~~~~~~~~~~F~gFsy~  154 (258)
                      ...+.+|++|+||..++|+.+..+.+.||+.|......+...|+++++......+...    .......-..|.||+|.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (321)
T cd05603         242 KADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPEFTQEAVSSSVGQTPDLTASSSSASSAFLGFSYA  320 (321)
T ss_pred             CCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCCcccccccccccCCCCcccccccccccccCCCccC
Confidence            2346799999999999999999899999999998888888999988775544333221    11122223358888874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.48  E-value=1.5e-13  Score=127.63  Aligned_cols=142  Identities=25%  Similarity=0.370  Sum_probs=106.1

Q ss_pred             ccccCCCC-CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKD-TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~-~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.++.. ..++..+|+        +|++|.+||.+.+....+.+|+...  +.+|.  .+|.++++||++||..+|.+
T Consensus       213 E~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r  292 (370)
T cd05596         213 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVR  292 (370)
T ss_pred             HHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhc
Confidence            56654321 236667773        8899999999999999999998743  56676  57999999999999987765


Q ss_pred             --ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCee
Q psy1025          75 --RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFT  152 (258)
Q Consensus        75 --RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFs  152 (258)
                        |++     +++|++||||++.+|.....+...+|++|.+....|.++|++.........+...+.........|.||+
T Consensus       293 ~~R~s-----~~ell~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (370)
T cd05596         293 LGRNG-----VDEIKSHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIEDDDKNEETFPLPKAFAGNQLPFIGFT  367 (370)
T ss_pred             cCCCC-----HHHHhcCcccCCCChhhHHhcCCCcCccCcCCCcchhhhcCCccccccccccCCCccccccccCccCCCe
Confidence              654     6999999999999998777788889999999888889999866554433322222222233355699999


Q ss_pred             ee
Q psy1025         153 YV  154 (258)
Q Consensus       153 y~  154 (258)
                      |.
T Consensus       368 ~~  369 (370)
T cd05596         368 YS  369 (370)
T ss_pred             ec
Confidence            84

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.46  E-value=3.5e-13  Score=125.26  Aligned_cols=145  Identities=27%  Similarity=0.370  Sum_probs=104.6

Q ss_pred             ccccCCCCC-CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDT-AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~-gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.++... .++..+|+        +|++|.+||.+.+....+..|+..  .+.+|.  .++..+++||.+||. ++.+
T Consensus       213 E~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~-~~~~  291 (370)
T cd05621         213 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLT-DREV  291 (370)
T ss_pred             HHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHcc-Cchh
Confidence            566543222 26677773        899999999999998889988864  356666  479999999999998 5566


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeee
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      |++.  .+++++++||||++.+|+....+...+|+.|.+....|.++|+.........++...+...-..+..|.||+|+
T Consensus       292 r~~R--~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (370)
T cd05621         292 RLGR--NGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQLPFIGFTYY  369 (370)
T ss_pred             ccCC--CCHHHHhcCcccCCCCcChHhcCCCCCCcCCCCCCcchhhhcCCccccccccccCCCCccccccccccCCCEec
Confidence            6542  35799999999999777766667888999999998889999986444333333322222112225789999996


Q ss_pred             C
Q psy1025         155 A  155 (258)
Q Consensus       155 ~  155 (258)
                      +
T Consensus       370 ~  370 (370)
T cd05621         370 R  370 (370)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=4.2e-13  Score=124.30  Aligned_cols=141  Identities=30%  Similarity=0.510  Sum_probs=107.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+....+..|...  .+.+|.  .++.++++||.+||+ +|.+|
T Consensus       218 E~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r  293 (377)
T cd05629         218 EIFLQ---QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENR  293 (377)
T ss_pred             HHHcc---CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence            56654   457777873        889999999998888888888764  355665  489999999999997 89999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCC------CccccccccCCCcc
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP------DESLLSESANLVFQ  149 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~------~~~~~~~~~~~~F~  149 (258)
                      ++.  .++.+++.||||.+++|+.+  +.+.+|++|.+....|..+|........+....      .......+.+..|.
T Consensus       294 ~~r--~~~~~~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (377)
T cd05629         294 LGR--GGAHEIKSHPFFRGVDWDTI--RQIRAPFIPQLKSITDTSYFPTDELEQVPEAPALKQAAPAQQEESVELDLAFI  369 (377)
T ss_pred             CCC--CCHHHHhcCCCcCCCCHHHH--ccCCCCcccCCCCccccccCCccccccCccccccccccccccccccccCcccc
Confidence            864  46899999999999999988  678899999999888888887654433222111      11122344566899


Q ss_pred             CeeeeCc
Q psy1025         150 GFTYVAP  156 (258)
Q Consensus       150 gFsy~~~  156 (258)
                      ||||.+.
T Consensus       370 ~~~~~~~  376 (377)
T cd05629         370 GYTYKRF  376 (377)
T ss_pred             cceecCC
Confidence            9999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.45  E-value=4.3e-13  Score=124.47  Aligned_cols=142  Identities=30%  Similarity=0.479  Sum_probs=104.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      =|++.+   .+|+..+|+        +|++|.+||.+.+..+....|....  +.+|.  .+++++++||.+|+. +|.+
T Consensus       217 PE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~  292 (382)
T cd05625         217 PEVLLR---TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR-GPED  292 (382)
T ss_pred             HHHhcC---CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHcc-CHhH
Confidence            366664   467788884        8899999999988888888877643  44453  589999999999875 9999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc----------cccccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES----------LLSESA  144 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~----------~~~~~~  144 (258)
                      |++.  .++++|+.||||++++|.... ++..+|+.|.+....|+++|+.............+.          ......
T Consensus       293 R~~~--~~~~ei~~hp~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (382)
T cd05625         293 RLGK--NGADEIKAHPFFKTIDFSSDL-RQQSAPYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLNGWYKNGKHP  369 (382)
T ss_pred             cCCC--CCHHHHhcCCCcCCcChHHHH-hcCCCCccCcCCCcchhhhcCCCCcccccccccccccccccccccccccccc
Confidence            9984  568999999999999999765 467889999999999999998754332211111111          011223


Q ss_pred             CCCccCeeeeC
Q psy1025         145 NLVFQGFTYVA  155 (258)
Q Consensus       145 ~~~F~gFsy~~  155 (258)
                      ...|.+|+|.+
T Consensus       370 ~~~~~~~~~~~  380 (382)
T cd05625         370 EHAFYEFTFRR  380 (382)
T ss_pred             Ccccccceecc
Confidence            45799999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.44  E-value=6.6e-13  Score=123.39  Aligned_cols=145  Identities=26%  Similarity=0.360  Sum_probs=104.7

Q ss_pred             ccccCCCCC-CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDT-AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~-gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+++.. .|+..+|+        +|++|.+||.+.+....+.+|+...  +.+|.  .++.++++||..||. ++..
T Consensus       213 E~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~  291 (371)
T cd05622         213 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREV  291 (371)
T ss_pred             HHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-Chhh
Confidence            556543222 26777873        8899999999999999999998753  55564  589999999999998 7888


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeee
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      |++.  .++++|++|+||.+.+|.....+...+|++|.+.+..+.++|+............+.+......+..|.||+|+
T Consensus       292 r~~r--~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (371)
T cd05622         292 RLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDIEEDKGEEETFPIPKAFVGNQLPFVGFTYY  369 (371)
T ss_pred             hcCC--CCHHHHhcCcccCCCChhHHhcCCCCCCCCCCCCCcchhhhcCCCcccccccccCCCCccccccccccCCCeec
Confidence            8764  56899999999999777665568888999999988888888875433222112111121112224789999997


Q ss_pred             C
Q psy1025         155 A  155 (258)
Q Consensus       155 ~  155 (258)
                      .
T Consensus       370 ~  370 (371)
T cd05622         370 S  370 (371)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=7.4e-13  Score=121.73  Aligned_cols=141  Identities=30%  Similarity=0.506  Sum_probs=105.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+..+|+        +|++|.+||.+.+....+..|+...  +.+|.  .+++++++||.+||. +|.+|
T Consensus       209 E~~~~---~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R  284 (364)
T cd05599         209 EVFLQ---TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERR  284 (364)
T ss_pred             HHHcC---CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhc
Confidence            66663   567788873        8889999999999888888887654  44454  479999999999997 99999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCC--ccccccccCCCccCeee
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPD--ESLLSESANLVFQGFTY  153 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~--~~~~~~~~~~~F~gFsy  153 (258)
                      ++.  .++++++.||||++++|+.+  +...+|++|.+.+..|.++|+.............  ........+..|.||+|
T Consensus       285 ~~~--~~~~~ll~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (364)
T cd05599         285 LGN--NGVNEIKSHPFFKGVDWEHI--RERPAPIIPELKSITDTSNFDDFEEIDLDVPTSPGPPRGKIKSKDLAFIGYTY  360 (364)
T ss_pred             CCC--CCHHHHhcCCCcCCCCHHHH--hhcCCCCCCCCCCchhhhhccccccccccccCCCccccccccccCCCCCCCee
Confidence            984  45799999999999999987  4567889999988889999975322221111111  11223456778999999


Q ss_pred             eCc
Q psy1025         154 VAP  156 (258)
Q Consensus       154 ~~~  156 (258)
                      .+.
T Consensus       361 ~~~  363 (364)
T cd05599         361 KRF  363 (364)
T ss_pred             eCC
Confidence            764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.40  E-value=9.9e-13  Score=122.22  Aligned_cols=139  Identities=26%  Similarity=0.413  Sum_probs=99.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC--CCCHHHHHHHHHHhhcccc--
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP--YLTPDARELIRKLLKRQVA--   73 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~--~~S~ea~dLI~~LL~kdP~--   73 (258)
                      |++.+   .+|+..+|+        +|++|.+||...+.......|...  .+.+|.  .++.++++||.+||+.++.  
T Consensus       218 E~~~~---~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~  294 (381)
T cd05626         218 EVLLR---KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERL  294 (381)
T ss_pred             HHHcC---CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCccccc
Confidence            56664   457777773        899999999988887777777653  355554  5899999999998875433  


Q ss_pred             cccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc---------ccccccc
Q psy1025          74 QRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE---------SLLSESA  144 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~---------~~~~~~~  144 (258)
                      .|++     +++|++||||.+++|.... +..++|++|.+....|+++|+.............+         .......
T Consensus       295 ~R~~-----~~~~l~hp~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (381)
T cd05626         295 GRNG-----ADDIKAHPFFSEVDFSSDI-RTQPAPYVPKISHPMDTSNFDPVEEESPWNDASGDSTRTWDTLCSPNGKHP  368 (381)
T ss_pred             CCCC-----HHHHhcCcccCCCChhHHh-hcCCCCccCcCCCcchhhhcCCCCcccccccCCccchhhhccccCcccccc
Confidence            3554     6999999999999999865 46778999999999999999875433221111111         0111223


Q ss_pred             CCCccCeeeeC
Q psy1025         145 NLVFQGFTYVA  155 (258)
Q Consensus       145 ~~~F~gFsy~~  155 (258)
                      ...|.||+|.+
T Consensus       369 ~~~~~~~~~~~  379 (381)
T cd05626         369 EHAFYEFTFRR  379 (381)
T ss_pred             cccccccEeec
Confidence            56899999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.39  E-value=1e-12  Score=119.75  Aligned_cols=137  Identities=34%  Similarity=0.562  Sum_probs=104.1

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHc--CCCCCCCC--CCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILR--GKLILPPY--LTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~--~~~~~P~~--~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|        |+|++|.+||...+....+.+|..  ..+.+|..  +++++++||.+||. ||.+|
T Consensus       200 E~~~~---~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R  275 (350)
T cd05573         200 EVLRG---TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDR  275 (350)
T ss_pred             HHHcC---CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Chhhc
Confidence            66664   35667777        388999999999888888888887  45566654  59999999999997 99999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCC--CccccccccCCCccCeee
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP--DESLLSESANLVFQGFTY  153 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~--~~~~~~~~~~~~F~gFsy  153 (258)
                      ++.    +++|++||||.+++|+.+.  ...||++|.+.+..|..+|+............  .........+..|.||+|
T Consensus       276 ~~s----~~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (350)
T cd05573         276 LGS----FEEIKSHPFFKGIDWENLR--ETKPPFVPELSSPLDTSNFDDFEDDKDLSDYLSQNSKKLNKGKQLAFVGFTY  349 (350)
T ss_pred             CCC----HHHHhcCCCcCCCCHHHHh--hCCCCcCCCCCCchhhhhcCCCCcccccccccccccccccccccCccCCCcc
Confidence            983    5999999999999999874  67789999999988888888654433222111  111223345668999998


Q ss_pred             e
Q psy1025         154 V  154 (258)
Q Consensus       154 ~  154 (258)
                      +
T Consensus       350 ~  350 (350)
T cd05573         350 K  350 (350)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.38  E-value=9.1e-13  Score=117.19  Aligned_cols=103  Identities=24%  Similarity=0.445  Sum_probs=83.7

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~----~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..|+..+|        |+|++|++||.+.+..    .+...+......++..++.++++||++||..||.+
T Consensus       170 PE~~~~---~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~  246 (285)
T cd05631         170 PEVINN---EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKE  246 (285)
T ss_pred             HhhhcC---CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHH
Confidence            366664   34666677        3888999999875432    33444555566788889999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |+++...++++|++||||.+++|+.+.++.++|||+|.
T Consensus       247 R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         247 RLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             hcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence            99865556899999999999999999999999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.33  E-value=6.4e-12  Score=114.01  Aligned_cols=130  Identities=28%  Similarity=0.472  Sum_probs=99.3

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .|+..+|+        +|++|..||...+....+.+|+...  +.+|.  .++.++++||.+||. +|.+|+++     +
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~-----~  258 (330)
T cd05601         185 TYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGY-----E  258 (330)
T ss_pred             CCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCH-----H
Confidence            45666773        8889999999988888888887643  44554  579999999999998 99999985     9


Q ss_pred             hhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc----cccccccCCCccCeeee
Q psy1025          85 AVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE----SLLSESANLVFQGFTYV  154 (258)
Q Consensus        85 eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~----~~~~~~~~~~F~gFsy~  154 (258)
                      +|++||||..++|+.+.  ...||++|.+....|.++|++.............    .......+..|.||+|.
T Consensus       259 ~l~~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (330)
T cd05601         259 GLCCHPFFSKIDWNNIR--NSLPPFVPTLKSDDDTSNFDEPEKNSTRRSQSSTTQLKPNGFSGKDLPFVGFSFI  330 (330)
T ss_pred             HHhCCCCcCCCCHHHHh--hCCCCccCcCCCcchhhhcCCCccccccccccccccCCCcCCCCCCCCccCceeC
Confidence            99999999999999884  5778899999888889998765444333322111    11233456789999984

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.28  E-value=2.8e-11  Score=110.23  Aligned_cols=134  Identities=30%  Similarity=0.522  Sum_probs=96.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP---YLTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      .|+..+|+        +|++|++||.+.+..+.+.+|+...  +.+|.   .++.++++||++||+. +..|++.  .++
T Consensus       184 ~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~-~~~r~~r--~~~  260 (332)
T cd05623         184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICS-REHRLGQ--NGI  260 (332)
T ss_pred             CCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccC-hhhhcCC--CCH
Confidence            46667773        8899999999999999999988754  34444   5799999999999985 4566653  467


Q ss_pred             hhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChh--cccCCCCCCCCccccccccCCCccCeeeeC
Q psy1025          84 EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK--FTRQTPVDSPDESLLSESANLVFQGFTYVA  155 (258)
Q Consensus        84 ~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~--f~~~~~~~s~~~~~~~~~~~~~F~gFsy~~  155 (258)
                      +++++||||.+++|+.+  +...+|++|...+..+.++++..  .........+......+.....|.+|||+.
T Consensus       261 ~~~~~h~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (332)
T cd05623         261 EDFKQHPFFTGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPSHTAFSGHHLPFVGFTYTS  332 (332)
T ss_pred             HHHhCCCCcCCCCHHHH--hhCCCCccCCCCCCcccccCCCCcccccccCCCCCCCccccccCCCCcCCeeecC
Confidence            99999999999999998  45778899998888887776532  111111111222222344467899999963

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0033|consensus

Probab=99.27  E-value=5.7e-12  Score=110.57  Aligned_cols=80  Identities=25%  Similarity=0.461  Sum_probs=72.6

Q ss_pred             cccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -||++   +..|++++| |       ++|.|.+||++++...+|+.|+.+.+.+|.    .++++|++||++||..||.+
T Consensus       181 PEvvr---kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~k  257 (355)
T KOG0033|consen  181 PEVLK---KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKK  257 (355)
T ss_pred             HHHhh---cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhh
Confidence            47888   578999999 3       888999999999999999999999988874    58999999999999999999


Q ss_pred             ccCCCCCCchhhccCCcccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |+++     .|.++|||.+.
T Consensus       258 RIta-----~EAL~HpWi~~  272 (355)
T KOG0033|consen  258 RITA-----DEALKHPWICN  272 (355)
T ss_pred             hccH-----HHHhCCchhcc
Confidence            9985     89999999984

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.27  E-value=1.9e-11  Score=108.71  Aligned_cols=114  Identities=39%  Similarity=0.703  Sum_probs=98.1

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|        |+|++|.+||...+....+..+....+.+|..++...+++|.+||..||.+|+...
T Consensus       168 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~  244 (290)
T cd05580         168 EIILS---KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNL  244 (290)
T ss_pred             hhhcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcc
Confidence            55543   24555666        38889999999888888888888888889999999999999999999999999765


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCCh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~  124 (258)
                      ...++++++||||..++|..+....+.+|+.|......|++.|++
T Consensus       245 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (290)
T cd05580         245 KNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDD  289 (290)
T ss_pred             cCCHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccccccccC
Confidence            556899999999999999999999999999999888888888874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0588|consensus

Probab=99.27  E-value=9.2e-12  Score=121.06  Aligned_cols=82  Identities=26%  Similarity=0.462  Sum_probs=73.9

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |||+|.+|.  |.+.|        |.||+|+.||.++|...++.++..+.+.+|..++.+|+|||+++|.+||.+|++. 
T Consensus       181 EIV~G~pYd--G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~-  257 (786)
T KOG0588|consen  181 EIVSGRPYD--GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITT-  257 (786)
T ss_pred             hhhcCCCCC--CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccH-
Confidence            999997665  44444        3888999999999999999999999999999999999999999999999999996 


Q ss_pred             CCCchhhccCCccccCC
Q psy1025          80 PNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~id   96 (258)
                          ++|.+|||+.+..
T Consensus       258 ----~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  258 ----EEILKHPFLSGYT  270 (786)
T ss_pred             ----HHHhhCchhhcCC
Confidence                9999999998654

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.24  E-value=4.1e-11  Score=109.25  Aligned_cols=133  Identities=28%  Similarity=0.492  Sum_probs=95.8

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP---YLTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      .++..+|+        +|++|++||...+....+..|+...  +.+|.   .++.++++||.+||+. +.+|++.  .++
T Consensus       184 ~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~-~~~~~~~--~~~  260 (331)
T cd05624         184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICS-RERRLGQ--NGI  260 (331)
T ss_pred             CCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccC-chhhcCC--CCH
Confidence            35666673        8899999999999888888888654  44554   3689999999999985 4566653  568


Q ss_pred             hhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhccc--CCCCCCCCccccccccCCCccCeeee
Q psy1025          84 EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTR--QTPVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        84 ~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~--~~~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      +++++|+||.+++|+.+  +.+.+|++|......+.++|+...+.  .....++............+.+|+|+
T Consensus       261 ~~~~~h~~f~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (331)
T cd05624         261 EDFKKHAFFEGIDWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNPEIAPPSSHTGFSGLHLPFVGFTYT  331 (331)
T ss_pred             HHHhcCCCcCCCCHHHH--hhCCCCccCCCCCcchhhhcCCccccccccccCCCccccccCCCCcCCCCceeC
Confidence            99999999999999988  67889999998888888888754331  12222222122222233458899984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0575|consensus

Probab=99.23  E-value=1.2e-11  Score=119.02  Aligned_cols=78  Identities=31%  Similarity=0.523  Sum_probs=73.4

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.   ++||+-.|| |       .||.|+|||...+..+++.+|....+.+|..+|.+|++||..||.+||.+|++. 
T Consensus       188 EVl~---k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl-  263 (592)
T KOG0575|consen  188 EVLN---KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSL-  263 (592)
T ss_pred             hHhc---cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCH-
Confidence            7777   589999999 3       888999999999999999999999999999999999999999999999999985 


Q ss_pred             CCCchhhccCCccc
Q psy1025          80 PNDGEAVRVHPFFR   93 (258)
Q Consensus        80 ~~g~~eIk~HpfF~   93 (258)
                          ++|+.|+||+
T Consensus       264 ----~~vL~h~Ff~  273 (592)
T KOG0575|consen  264 ----DEVLDHPFFK  273 (592)
T ss_pred             ----HHHhcCHhhh
Confidence                9999999994

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.21  E-value=7e-11  Score=109.31  Aligned_cols=111  Identities=30%  Similarity=0.544  Sum_probs=89.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+..+|+        +|++|++||.+.+.......|....  +.+|.  .++.++++||.+|+. +|.+|
T Consensus       214 E~~~~---~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~-~p~~R  289 (376)
T cd05598         214 EVLLR---TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCC-GAEDR  289 (376)
T ss_pred             HHHcC---CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence            66664   467777773        8899999999988888877777643  33343  589999999999774 99999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK  125 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~  125 (258)
                      ++.  +.++++++||||.+++|..+. +...+|++|.+....|.++|+..
T Consensus       290 ~~~--~t~~ell~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  336 (376)
T cd05598         290 LGK--NGADEIKAHPFFKGIDFASLI-RRQKAPYIPKITHPTDTSNFDPV  336 (376)
T ss_pred             CCC--CCHHHHhCCCCcCCCCHHHHh-hcCCCCCCCcCCCcchhhhcCCC
Confidence            963  357999999999999999887 66788999999888888888764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.16  E-value=7.3e-11  Score=104.65  Aligned_cols=102  Identities=25%  Similarity=0.535  Sum_probs=81.9

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNR----KKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~----~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..++..+|        |+|++|+.||...+.    ......+......+|..++.++++||.+||..||.+
T Consensus       166 PE~~~~---~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  242 (280)
T cd05608         166 PELLQG---EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEK  242 (280)
T ss_pred             HHHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHH
Confidence            355654   34566667        288899999976432    344555666677788889999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      |++.....++++++||||.+++|..+....+++||.|
T Consensus       243 R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  279 (280)
T cd05608         243 RLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP  279 (280)
T ss_pred             hcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence            9986444579999999999999999988889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=2.4e-10  Score=104.19  Aligned_cols=133  Identities=28%  Similarity=0.467  Sum_probs=94.9

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC---CCCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP---YLTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      .|+..+|+        +|++|+.||.+.+..+.+..|+...  +.+|.   .++.++++||++||+. +.+|++.  ..+
T Consensus       184 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~-~~~r~~r--~~~  260 (331)
T cd05597         184 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGR--NGL  260 (331)
T ss_pred             CCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccC-cccccCC--CCH
Confidence            45666773        8889999999998888888887643  34443   4799999999999984 6666543  357


Q ss_pred             hhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCC--CCCCCCccccccccCCCccCeeee
Q psy1025          84 EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQT--PVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        84 ~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~--~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      +++++||||.+++|+.+.  ...+|++|...+..++++|+.......  ....+............+.+|+|+
T Consensus       261 ~~~l~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (331)
T cd05597         261 QDFKDHPFFEGIDWDNIR--NSTAPYVPEVSSPTDTSNFDVDDDDLRNTESLPPSSHGAFSGNHLPFVGFTYT  331 (331)
T ss_pred             HHHhcCCCCCCCCHHHHh--hCCCCccCcCCCcchhhhcCCcccccccccccCCCCcCcCCcCCCCCCceeeC
Confidence            999999999999999884  467889999888888888875432221  111222222223345678899885

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=1.4e-10  Score=103.19  Aligned_cols=103  Identities=28%  Similarity=0.452  Sum_probs=81.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l----~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..++..+|+        +|++|..||.+.+....    ...|......+|..++..+++||.+||..||.+
T Consensus       170 PE~~~~---~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  246 (285)
T cd05605         170 PEVVKN---ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGF  246 (285)
T ss_pred             cHHhcC---CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHH
Confidence            356654   345566662        78899999987655433    334445566777889999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |+++....+++++.|+||...+|+.+..+.+.|||.|.
T Consensus       247 R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05605         247 RLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD  284 (285)
T ss_pred             hcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence            99764446799999999999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0615|consensus

Probab=99.09  E-value=4.4e-11  Score=111.02  Aligned_cols=85  Identities=18%  Similarity=0.293  Sum_probs=73.6

Q ss_pred             cccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHH-HHHHHHcCCCCCC-C---CCCHHHHHHHHHHhhcccc
Q psy1025           7 ASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKK-TIEKILRGKLILP-P---YLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~-l~~~Il~~~~~~P-~---~~S~ea~dLI~~LL~kdP~   73 (258)
                      -|||.+.++.+|+..|| |       ++|+|.|||.+..... +.+.|+.+.+.|- .   .+|+++++||.+||..||.
T Consensus       347 PEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~  426 (475)
T KOG0615|consen  347 PEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPE  426 (475)
T ss_pred             hhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcc
Confidence            38999887888998888 3       8889999998766555 8899999998763 2   5899999999999999999


Q ss_pred             cccCCCCCCchhhccCCccccCC
Q psy1025          74 QRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      +|.+.     ++.++||||+.++
T Consensus       427 ~R~s~-----~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  427 NRPSA-----DEALNHPWFKDAP  444 (475)
T ss_pred             cCcCH-----HHHhcChhhhccc
Confidence            99985     9999999999766

>KOG0606|consensus

Probab=99.06  E-value=2.2e-10  Score=116.32  Aligned_cols=115  Identities=28%  Similarity=0.531  Sum_probs=101.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.|   ..|+.++||        +.++|.+||....+..+|++|++....+|.   .++.++++++.+||..++.+|+
T Consensus      1005 e~~lg---~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~ 1081 (1205)
T KOG0606|consen 1005 EILLG---RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRL 1081 (1205)
T ss_pred             ccccc---ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhcc
Confidence            56664   689999997        778999999999999999999999988875   5899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccC
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ  129 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~  129 (258)
                      |.  .|..+++.|+||+.++|+.|.  ....+|+|+..+..|+++|...|..+
T Consensus      1082 ~a--~~~~e~k~~~~~~~~~~~~l~--~q~~~~~p~~~s~~dtS~~~~r~~~~ 1130 (1205)
T KOG0606|consen 1082 GA--KGAAEVKGHPFFQDVDWENLA--LQKAEFVPQPESTQDTSYFESRFSEE 1130 (1205)
T ss_pred             Cc--ccccccccCCccCCCCccccc--cccCccCCCCCCCCccchhhcccccc
Confidence            97  677899999999999999984  45567999999999999999887733

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.06  E-value=4.1e-10  Score=99.67  Aligned_cols=101  Identities=22%  Similarity=0.456  Sum_probs=76.5

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCH----HHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNR----KKTIEKILRGKLILP-PYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~----~~l~~~Il~~~~~~P-~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+   ..++..+|        |+|++|.+||.....    ..+...++...+.++ ..++.++++||.+||.+||.+
T Consensus       164 E~~~~---~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~  240 (277)
T cd05607         164 EILKE---EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPED  240 (277)
T ss_pred             HHHcc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhh
Confidence            55554   33666677        388899999976432    344445555554444 368999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |+++. ...++++.|+||++++|+.+..+.++|||+|.
T Consensus       241 R~~~~-~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05607         241 RLGSR-EKNDDPRKHEFFKTINFPRLEAGLIPPPFVPD  277 (277)
T ss_pred             CCCCc-cchhhhhcChhhcCCCHHHHhcCcCCCCCCCC
Confidence            99862 22378899999999999999999999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0580|consensus

Probab=99.06  E-value=1.3e-10  Score=101.52  Aligned_cols=78  Identities=26%  Similarity=0.399  Sum_probs=72.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |.+.|   .+|.+.||.        ++|.|.+||...+..++|.+|....+.+|..++.+|+|||.+||.++|.+|+.. 
T Consensus       192 Emv~~---~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l-  267 (281)
T KOG0580|consen  192 EMVEG---RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLAL-  267 (281)
T ss_pred             hhcCC---CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccH-
Confidence            67775   689999993        999999999999999999999999999999999999999999999999999986 


Q ss_pred             CCCchhhccCCccc
Q psy1025          80 PNDGEAVRVHPFFR   93 (258)
Q Consensus        80 ~~g~~eIk~HpfF~   93 (258)
                          .+++.|||..
T Consensus       268 ----~~v~~hpwI~  277 (281)
T KOG0580|consen  268 ----TEVMDHPWIV  277 (281)
T ss_pred             ----HHHhhhHHHH
Confidence                9999999975

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.06  E-value=3.6e-10  Score=100.58  Aligned_cols=103  Identities=30%  Similarity=0.530  Sum_probs=77.6

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHH---HHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRK---KTIEKIL-RGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~---~l~~~Il-~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..++..+|        |+|++|.+||......   .....+. .....++..++.++++||.+||+.||.+
T Consensus       170 PE~~~~---~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  246 (285)
T cd05630         170 PEVVKN---ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKE  246 (285)
T ss_pred             hHHHcC---CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHH
Confidence            355554   33555666        3888999999864321   1222222 2234567778999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |+++...+++++++||||..++|..+...+.+|||+|.
T Consensus       247 R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05630         247 RLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD  284 (285)
T ss_pred             ccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence            99864445799999999999999999988899999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4717|consensus

Probab=99.05  E-value=1.4e-10  Score=110.60  Aligned_cols=84  Identities=21%  Similarity=0.367  Sum_probs=74.2

Q ss_pred             cccccCCCCCCCCc-eeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           7 ASIVRNQKDTAHTK-AER-N-------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         7 ~EIi~~~~~~gh~~-~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      -|||.|.   .|.. +|| |       +++||++||...|..++...|+..++..|..+|.+|+|||..||.+||.+|.+
T Consensus       187 PEILLGD---sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAs  263 (864)
T KOG4717|consen  187 PEILLGD---SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRAS  263 (864)
T ss_pred             chhhhcC---ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhcc
Confidence            4899975   3433 555 3       78899999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCchhhccCCccccCChh
Q psy1025          78 SGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~idW~   98 (258)
                      .     ++|-.|+|.+.+|-.
T Consensus       264 l-----EeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  264 L-----EEIVSTSWLQAGDRG  279 (864)
T ss_pred             H-----HHHhccccccCCCCC
Confidence            5     999999999988843

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=6.9e-10  Score=100.90  Aligned_cols=108  Identities=29%  Similarity=0.489  Sum_probs=86.0

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC------CCCHHHHHHHHHHhhc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP------YLTPDARELIRKLLKR   70 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~------~~S~ea~dLI~~LL~k   70 (258)
                      -|++.+   ..|+..+|+        +|++|.+||.+.+..+.+..|....  +..|.      .++.++.+||.+||..
T Consensus       167 PE~~~~---~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         167 PEVLRG---KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             hhHhcC---CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhC
Confidence            366665   356777773        8899999999999888888877543  22232      4589999999999998


Q ss_pred             ccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCCh
Q psy1025          71 QVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        71 dP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~  124 (258)
                      +|.+|.+     +++|++||||.+++|..+.  ...||++|.+....+..+|++
T Consensus       244 ~~~rr~s-----~~~ll~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  290 (333)
T cd05600         244 PSRRFGS-----LEDIKNHPFFKEVDWNELR--ELKPPFVPELESEIDTGYFDD  290 (333)
T ss_pred             hhhhcCC-----HHHHHhCcccCCCCHHHHh--hCCCCCCCCCCCcchhhhccC
Confidence            8888887     4999999999999999884  788999998887777776654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.01  E-value=5.9e-10  Score=98.31  Aligned_cols=103  Identities=25%  Similarity=0.517  Sum_probs=79.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCH----HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR----KKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~----~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+.   .++...|+        +|++|+.||...+.    ..+...+......+|..+++++++||.+||..+|.+
T Consensus       163 PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (277)
T cd05577         163 PEVLQGE---VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEK  239 (277)
T ss_pred             HHHhcCC---CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhH
Confidence            3555542   35556663        78899999976543    333444445556677788999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |++.....+.+++.||||..++|+.+.+-..+|||+|+
T Consensus       240 R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05577         240 RLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIPD  277 (277)
T ss_pred             ccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCCC
Confidence            99764446789999999999999999888888999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.01  E-value=9.2e-10  Score=97.83  Aligned_cols=103  Identities=24%  Similarity=0.478  Sum_probs=82.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHH----HHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTI----EKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~----~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..|+..+|+        +|++|.+||.+.......    ..+......++..++.++.+||.+||..||.+
T Consensus       170 PE~~~~---~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  246 (285)
T cd05632         170 PEVLNN---QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQ  246 (285)
T ss_pred             hHHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhH
Confidence            356654   346666673        788999999876654333    33344455677789999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |+++...++.+++.|+||..++|+.+..+++.|||+|.
T Consensus       247 R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05632         247 RLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD  284 (285)
T ss_pred             cCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence            99976666899999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.01  E-value=6.5e-10  Score=111.31  Aligned_cols=107  Identities=24%  Similarity=0.470  Sum_probs=90.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|+...+.+|.   .++.++.++|.+||..||.+|+
T Consensus       550 E~l~~---~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~  626 (669)
T cd05610         550 ELLLG---KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRA  626 (669)
T ss_pred             HHcCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCc
Confidence            66765   457788883        889999999999999999999887766664   5788999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCCh
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~  124 (258)
                      ++     .+++.|+||..++|+.+.  ...+||+|...+..|..+|+.
T Consensus       627 ta-----~e~l~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  667 (669)
T cd05610         627 GL-----KELKQHPLFHGVDWENLQ--NQTMPFIPQPDDETDTSYFEA  667 (669)
T ss_pred             CH-----HHHHhCHhhcCCCHHHhc--ccCCCCCCCCCCccccccccc
Confidence            85     999999999999999884  456889998777778888764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases

Probab=98.99  E-value=3.2e-10  Score=79.27  Aligned_cols=63  Identities=40%  Similarity=0.778  Sum_probs=51.5

Q ss_pred             ccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccc-cCCCccCeeeeC
Q psy1025          93 RSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSES-ANLVFQGFTYVA  155 (258)
Q Consensus        93 ~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~-~~~~F~gFsy~~  155 (258)
                      ++|||+.|+.|+++|||+|.+.+..|+++|+.+|+.+.+..++........ .+..|.||+|+.
T Consensus         1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~~~~~~~~~s~~~~~~~~~~~~~~F~gfsy~~   64 (64)
T smart00133        1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDEFTEETPVLTPVDSPASGGSQQEPFRGFSYVF   64 (64)
T ss_pred             CCCCHHHHHhCCCCCCcccccCCccHHhHcCCcCCCCCCCCCCCCccccccccccccCCCcccC
Confidence            479999999999999999999999999999998998888777765433222 146899999963

>KOG0604|consensus

Probab=98.99  E-value=2.6e-10  Score=102.59  Aligned_cols=79  Identities=29%  Similarity=0.433  Sum_probs=66.4

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCH----HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNR----KKTIEKILRGKLILPP----YLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~----~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kd   71 (258)
                      ||+.   .+-|.++||        |+||+|.|||+..-.    ..+-.+|..+.+.||.    .+|++++|||++||+.+
T Consensus       233 evlg---~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~  309 (400)
T KOG0604|consen  233 EVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTE  309 (400)
T ss_pred             HHhC---chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCC
Confidence            5555   345889998        389999999986432    3467789999999996    48999999999999999


Q ss_pred             cccccCCCCCCchhhccCCcccc
Q psy1025          72 VAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |.+||+     +++++.|||..+
T Consensus       310 PteRlT-----I~~~m~hpwi~~  327 (400)
T KOG0604|consen  310 PTERLT-----IEEVMDHPWINQ  327 (400)
T ss_pred             chhhee-----HHHhhcCchhcc
Confidence            999998     599999999974

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.99  E-value=1.8e-09  Score=96.71  Aligned_cols=103  Identities=29%  Similarity=0.510  Sum_probs=85.1

Q ss_pred             CCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      +++..+|        |+|++|..||.+.+..+++..+....+.+|.   .++.++++||.+||..+|.+|+++  ..+.+
T Consensus       192 ~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~--~~~~~  269 (305)
T cd05609         192 GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGT--GGAFE  269 (305)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCc--cCHHH
Confidence            4566666        3888999999998888888888877655554   578999999999999999999986  45799


Q ss_pred             hccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCC
Q psy1025          86 VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD  123 (258)
Q Consensus        86 Ik~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd  123 (258)
                      +++||||.+++|..+..  ...+++|++.+..|.++||
T Consensus       270 ll~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  305 (305)
T cd05609         270 VKQHRFFLGLDWNGLLR--QKAEFIPQLESEDDTSYFD  305 (305)
T ss_pred             HHhCccccCCCHHHHhh--cCCCCCCCCCCccccccCC
Confidence            99999999999998753  3457899998888888775

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.99  E-value=1.5e-09  Score=96.15  Aligned_cols=103  Identities=29%  Similarity=0.536  Sum_probs=79.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      -|++.+  ...++..+|.        +|++|..||...   ........+....+.+|..++.++.+||.+||.++|.+|
T Consensus       164 PE~~~~--~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R  241 (278)
T cd05606         164 PEVLQK--GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR  241 (278)
T ss_pred             cHHhcC--CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhc
Confidence            355553  2346666773        888999999875   334444445555677788889999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      +.+....+.++++||||..++|+.+..++.+++.+|
T Consensus       242 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  277 (278)
T cd05606         242 LGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP  277 (278)
T ss_pred             cCCCCCCHHHHHhCccccCCCchHhhhcccCCCCCC
Confidence            976444679999999999999999988887777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0583|consensus

Probab=98.97  E-value=6.3e-10  Score=104.13  Aligned_cols=81  Identities=30%  Similarity=0.516  Sum_probs=72.2

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYL-TPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~-S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |||.+.. .-.++++|        |.|++|+.||...+...++.+|..+.+.+|.++ |.++++||++||..||.+|+++
T Consensus       191 Evl~~~~-~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~  269 (370)
T KOG0583|consen  191 EVLSGKG-TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITL  269 (370)
T ss_pred             HHhCCCC-CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCH
Confidence            8888742 02357777        399999999999999999999999999999999 9999999999999999999985


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           .+|+.||||+.
T Consensus       270 -----~~i~~h~w~~~  280 (370)
T KOG0583|consen  270 -----LEILEHPWFQK  280 (370)
T ss_pred             -----HHHhhChhhcc
Confidence                 99999999985

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.96  E-value=2e-09  Score=95.51  Aligned_cols=97  Identities=29%  Similarity=0.516  Sum_probs=74.9

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCC---HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADN---RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~---~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++...|.        +|++|..||....   ...+..........+|..++.++++||.+||.+||.+|+++....+.
T Consensus       171 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (279)
T cd05633         171 TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQ  250 (279)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence            345666662        8889999997532   22333333344566778899999999999999999999975555689


Q ss_pred             hhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          85 AVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        85 eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      +|++||||++++|..+...++.+|.+|.
T Consensus       251 ~~~~h~~~~~~~~~~~~~~~~~~~~~~~  278 (279)
T cd05633         251 EVKEHVFFKGIDWQQVYLQKYPPPLIPP  278 (279)
T ss_pred             HHHhCccccCCCHhHHhcCCCCCCCCCC
Confidence            9999999999999998877887887764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.95  E-value=2e-09  Score=95.33  Aligned_cols=85  Identities=35%  Similarity=0.766  Sum_probs=71.5

Q ss_pred             hhhcCCCCCCCCC----HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          25 ILEAVKPPFTADN----RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        25 ~ml~G~pPF~~~~----~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +|++|..||...+    ...+...+.......|..++.++++||.+||..||.+|++.  .++.++++||||++++|+.+
T Consensus       200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~--~~~~~~l~~~~~~~~~~~~~  277 (288)
T cd05583         200 ELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGA--NGADEIKNHPFFQGIDWDDL  277 (288)
T ss_pred             HHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCc--chHHHHhcCcccccCCHHHH
Confidence            8889999996432    23444556666667778899999999999999999999986  57889999999999999999


Q ss_pred             hcCCCCCCCcC
Q psy1025         101 LSRKLEPPFKP  111 (258)
Q Consensus       101 ~~r~~~pPf~P  111 (258)
                      .++.+.|||.|
T Consensus       278 ~~~~~~~~~~~  288 (288)
T cd05583         278 AAKRIPAPFKP  288 (288)
T ss_pred             hhhccCCCCCC
Confidence            99999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0603|consensus

Probab=98.89  E-value=1.3e-09  Score=105.79  Aligned_cols=75  Identities=23%  Similarity=0.352  Sum_probs=64.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ||+.   .++|+.+|||        +||+|.+||...... +++.+|...+..  ..+|.+|+|||+.||+.||.+||+.
T Consensus       483 Evl~---~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKdLl~~LL~~dP~~Rl~~  557 (612)
T KOG0603|consen  483 EVLA---IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKDLLQQLLQVDPALRLGA  557 (612)
T ss_pred             hhhc---cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHHHHHHhccCChhhCcCh
Confidence            6777   5899999997        999999999876555 666666555333  7899999999999999999999986


Q ss_pred             CCCCchhhccCCcc
Q psy1025          79 GPNDGEAVRVHPFF   92 (258)
Q Consensus        79 ~~~g~~eIk~HpfF   92 (258)
                           .+|..|+||
T Consensus       558 -----~~i~~h~w~  566 (612)
T KOG0603|consen  558 -----DEIGAHPWF  566 (612)
T ss_pred             -----hhhccCcch
Confidence                 899999999

>KOG0607|consensus

Probab=98.87  E-value=2.4e-09  Score=97.20  Aligned_cols=101  Identities=29%  Similarity=0.406  Sum_probs=78.6

Q ss_pred             CCCCCceeh--------HhhhcCCCCCCCCC---------------HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHH
Q psy1025          15 DTAHTKAER--------NILEAVKPPFTADN---------------RKKTIEKILRGKLILPP----YLTPDARELIRKL   67 (258)
Q Consensus        15 ~~gh~~~vD--------~~ml~G~pPF~~~~---------------~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~L   67 (258)
                      -.-|.+-||        |+||+|.+||.+.-               ...+|+.|..+.+.||.    .+|.+++|||+.|
T Consensus       265 A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnL  344 (463)
T KOG0607|consen  265 ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNL  344 (463)
T ss_pred             cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHH
Confidence            346788887        39999999996531               45689999999999996    5999999999999


Q ss_pred             hhcccccccCCCCCCchhhccCCccccCChhhhhcCCCC-CCCcCcCCCCCCCCCCCh
Q psy1025          68 LKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLE-PPFKPSLTGEDDVSQFDT  124 (258)
Q Consensus        68 L~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~-pPf~P~~~~~~D~s~Fd~  124 (258)
                      |.+|+.+||.+     .++.+|||+..+.-+    +.++ |+.+-...+..|++.|..
T Consensus       345 lvrda~~rlsa-----~~vlnhPw~~~~~~e----kalptp~v~~r~~s~~~lslfa~  393 (463)
T KOG0607|consen  345 LVRDAKQRLSA-----AQVLNHPWVQRCAPE----KALPTPQVLQRNSSTMDLSLFAA  393 (463)
T ss_pred             HhccHHhhhhh-----hhccCCccccccchh----ccCCCCcccccCccchhhHHHHH
Confidence            99999999985     999999999987655    3343 334444444456676664

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=5.8e-09  Score=93.66  Aligned_cols=101  Identities=32%  Similarity=0.601  Sum_probs=80.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCC--CCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~--~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++|..||.+.+....+..+....+.+|..  ++.++++||.+||.+||.+|++
T Consensus       202 E~~~~---~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s  278 (316)
T cd05574         202 EVISG---DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLG  278 (316)
T ss_pred             HHHcC---CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCC
Confidence            44543   345666663        8889999999988888888888777777664  6999999999999999999998


Q ss_pred             CCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCC
Q psy1025          78 SGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT  114 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~  114 (258)
                      . ..++++|+.||||.+++|..+.  .-.||-+|.+.
T Consensus       279 ~-~~~~~~ll~~~~~~~~~~~~~~--~~~~~~~~~~~  312 (316)
T cd05574         279 S-KRGAAEIKQHPFFRGVNWALIR--HTTPPIIPRPD  312 (316)
T ss_pred             c-hhhHHHHHcCchhhcCChhhcc--cCCCCCCCCcc
Confidence            4 3456999999999999999883  46667777654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.85  E-value=1.1e-08  Score=90.54  Aligned_cols=95  Identities=36%  Similarity=0.710  Sum_probs=77.7

Q ss_pred             CCCceehH--------hhhcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      +++...|.        +|++|..||...    ....+...+......+|..++....+||.+||..||.+|+++.+..++
T Consensus       184 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~  263 (290)
T cd05613         184 GHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDAD  263 (290)
T ss_pred             CCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence            45666663        888999999643    234455556666667788899999999999999999999987777889


Q ss_pred             hhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          85 AVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        85 eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      +++.||||..++|+.+..+..++||.|
T Consensus       264 ~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05613         264 EIKKHPFFQKINWDDLAAKKVPAPFKP  290 (290)
T ss_pred             HHHcCcccccCCHHHHhhccCCCCCCC
Confidence            999999999999999988888888865

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0032|consensus

Probab=98.84  E-value=4.5e-09  Score=98.78  Aligned_cols=80  Identities=26%  Similarity=0.404  Sum_probs=71.0

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      ||+.   +.+|+..+| |       +||+|.+||.+.+...++..|+.+.+.|+.    .+|..|++||++||.+||..|
T Consensus       208 Evl~---~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R  284 (382)
T KOG0032|consen  208 EVLG---GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKR  284 (382)
T ss_pred             hhhc---CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccC
Confidence            6676   478999999 3       999999999999999999999999887753    589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~i   95 (258)
                      +++     .++++|||+.+.
T Consensus       285 ~ta-----~~~L~HpWi~~~  299 (382)
T KOG0032|consen  285 LTA-----AQALQHPWIKSI  299 (382)
T ss_pred             CCH-----HHHhcCccccCC
Confidence            985     999999997753

>KOG0585|consensus

Probab=98.83  E-value=3.7e-09  Score=99.90  Aligned_cols=65  Identities=26%  Similarity=0.476  Sum_probs=61.4

Q ss_pred             HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCC--CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          24 NILEAVKPPFTADNRKKTIEKILRGKLILPPY--LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        24 ~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~--~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      |+||.|+.||.++...++|.+|.+..+.||..  +.++++|||.+||++||.+|++.     .+|+.|||..
T Consensus       310 YCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l-----~~ik~Hpwvt  376 (576)
T KOG0585|consen  310 YCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITL-----PDIKLHPWVT  376 (576)
T ss_pred             HHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeeh-----hhheecceec
Confidence            38999999999999999999999999999975  89999999999999999999985     9999999975

>KOG0599|consensus

Probab=98.82  E-value=1.6e-09  Score=96.52  Aligned_cols=76  Identities=25%  Similarity=0.398  Sum_probs=65.9

Q ss_pred             CCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC--C--CCCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          15 DTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRGKLILP--P--YLTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        15 ~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P--~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      -.||++.|| |       .+|.|.|||+....--+...|+.+++.|-  .  .+|.+++|||.+||++||.+|+++    
T Consensus       202 ~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rita----  277 (411)
T KOG0599|consen  202 HPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITA----  277 (411)
T ss_pred             CCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccH----
Confidence            369999999 3       77899999998766677888999998873  3  589999999999999999999986    


Q ss_pred             chhhccCCccccC
Q psy1025          83 GEAVRVHPFFRSI   95 (258)
Q Consensus        83 ~~eIk~HpfF~~i   95 (258)
                       ++.++||||..+
T Consensus       278 -ke~LaHpff~q~  289 (411)
T KOG0599|consen  278 -KEALAHPFFIQI  289 (411)
T ss_pred             -HHHhcChHHHHH
Confidence             999999999754

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=1.2e-08  Score=88.75  Aligned_cols=86  Identities=31%  Similarity=0.583  Sum_probs=69.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++...|+        +|++|.+||...+...++..+......++    ..++.++.++|.+||..+|..|
T Consensus       163 e~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  239 (260)
T cd05611         163 ETILG---VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKR  239 (260)
T ss_pred             hhhcC---CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHc
Confidence            45554   235666773        78899999999888888888876655544    3578999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +++  .++++++.||||..++||
T Consensus       240 ~~~--~~~~~~l~~~~~~~~~~~  260 (260)
T cd05611         240 LGA--NGYQEIKSHPFFKSINWD  260 (260)
T ss_pred             cCC--CcHHHHHcChHhhcCCCC
Confidence            986  567999999999999996

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0597|consensus

Probab=98.76  E-value=5e-09  Score=100.96  Aligned_cols=80  Identities=24%  Similarity=0.368  Sum_probs=71.4

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|+++++   .|...+|        |+|..|+|||+......+...|+..++.+|..+|.++++||.+||.+||.+|+++
T Consensus       169 PElv~e~---pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW  245 (808)
T KOG0597|consen  169 PELVEEQ---PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTW  245 (808)
T ss_pred             HHHHcCC---CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccH
Confidence            3788864   5555555        3889999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           .++..|||.++
T Consensus       246 -----~~Ll~HpF~k~  256 (808)
T KOG0597|consen  246 -----TDLLGHPFWKG  256 (808)
T ss_pred             -----HHHhcChHHhh
Confidence                 99999999874

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.68  E-value=3.6e-08  Score=85.77  Aligned_cols=74  Identities=32%  Similarity=0.657  Sum_probs=63.6

Q ss_pred             hhhcCCCCCCCCC--HHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          25 ILEAVKPPFTADN--RKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        25 ~ml~G~pPF~~~~--~~~l~~~Il--~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +|++|.+||...+  ....+..+.  ...+.+|..++.+++++|.+||.++|.+|++.-...++++++||||.+.+|+
T Consensus       184 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         184 ELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             HHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence            7889999998776  677777777  4567788888999999999999999999998444557999999999999996

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.66  E-value=5.4e-08  Score=84.01  Aligned_cols=71  Identities=34%  Similarity=0.655  Sum_probs=63.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYL--TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~--S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +|++|..||...+....+..+....+.+|...  +.++.+||.+||..+|.+|+++  ..+.++++||||..|+|
T Consensus       193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~--~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         193 EFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGA--KSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCC--ccHHHHhcCccccCCCC
Confidence            78899999999888888888888777777765  9999999999999999999986  56799999999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.64  E-value=3.2e-08  Score=94.25  Aligned_cols=84  Identities=19%  Similarity=0.249  Sum_probs=63.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----------------CCC-----------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----------------KLI-----------   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----------------~~~-----------   51 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+....+.+|+..                 .+.           
T Consensus       240 E~~~~--~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~  317 (440)
T PTZ00036        240 ELMLG--ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKK  317 (440)
T ss_pred             HHhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHH
Confidence            66664  3568888883        889999999988776655555421                 111           


Q ss_pred             -CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          52 -LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        52 -~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                       +|...+.++++||.+||.+||.+|+++     .++++||||..+.+.
T Consensus       318 ~~p~~~~~~~~~li~~~L~~dP~~R~ta-----~e~l~hp~f~~~~~~  360 (440)
T PTZ00036        318 VFPKGTPDDAINFISQFLKYEPLKRLNP-----IEALADPFFDDLRDP  360 (440)
T ss_pred             HhccCCCHHHHHHHHHHCCCChhHCcCH-----HHHhCChhHHhhhcc
Confidence             344578899999999999999999985     999999999876553

>KOG0578|consensus

Probab=98.59  E-value=5.2e-08  Score=93.60  Aligned_cols=79  Identities=22%  Similarity=0.389  Sum_probs=68.1

Q ss_pred             cccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHc-CC--CCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILR-GK--LILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~-~~--~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      .||+.   +..|+..|| |       ||+-|.|||..+++-.-...|.. +.  +..|..+|++.++||.+||++|+.+|
T Consensus       438 PEVvt---rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~R  514 (550)
T KOG0578|consen  438 PEVVT---RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQR  514 (550)
T ss_pred             hhhhh---hcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcC
Confidence            47887   789999999 3       89999999998888777777753 44  55678999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccc
Q psy1025          76 LGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~   93 (258)
                      .++     .+++.||||+
T Consensus       515 asA-----~eLL~HpFl~  527 (550)
T KOG0578|consen  515 ASA-----KELLEHPFLK  527 (550)
T ss_pred             CCH-----HHHhcChhhh
Confidence            985     9999999995

>KOG0581|consensus

Probab=98.59  E-value=8.1e-08  Score=88.27  Aligned_cols=82  Identities=15%  Similarity=0.256  Sum_probs=68.2

Q ss_pred             ccccCCCCCCCCceehH-----hhhcCCCCCCCC-----CHHHHHHHHHcC-CCCCCCC-CCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN-----ILEAVKPPFTAD-----NRKKTIEKILRG-KLILPPY-LTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~-----~ml~G~pPF~~~-----~~~~l~~~Il~~-~~~~P~~-~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |-|.|+.|...++.|.+     ||..|+.||...     +..+++..|+.+ .+.+|.. +|+++++||..||+|||.+|
T Consensus       247 ERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R  326 (364)
T KOG0581|consen  247 ERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSER  326 (364)
T ss_pred             hhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccC
Confidence            66777655555555543     888999999764     788999999985 5778886 99999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      .+.     .++++|||++.
T Consensus       327 ~s~-----~qLl~Hpfi~~  340 (364)
T KOG0581|consen  327 PSA-----KQLLQHPFIKK  340 (364)
T ss_pred             CCH-----HHHhcCHHHhh
Confidence            985     99999999974

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.42  E-value=3.1e-07  Score=81.11  Aligned_cols=78  Identities=23%  Similarity=0.276  Sum_probs=56.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+   ..++..+|+        +|++|++||.+.+.......|...                   ...+|      
T Consensus       170 PE~~~~---~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07848         170 PELLLG---APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ  246 (287)
T ss_pred             cHHHcC---CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence            366664   346777773        888999999887665544333221                   01111      


Q ss_pred             -------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 -------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 -------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                             ..++.++++||++||.+||.+|+++     +++++||||
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~-----~~~l~hp~f  287 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLT-----EQCLNHPAF  287 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence                   1368889999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.42  E-value=3.2e-07  Score=81.59  Aligned_cols=79  Identities=23%  Similarity=0.400  Sum_probs=59.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++..+|+        +|++|++||.+.+..+....|...                   .+.+|      
T Consensus       172 PE~~~~--~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (288)
T cd07871         172 PDVLLG--STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQP  249 (288)
T ss_pred             hHHhcC--CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCc
Confidence            366654  3567777883        888999999988877666554321                   01112      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                           ..++.++++||++||..||.+|+++     +++++||||
T Consensus       250 ~~~~~~~~~~~~~dll~~mL~~dp~~R~t~-----~~~l~hp~f  288 (288)
T cd07871         250 LINHAPRLDTDGIDLLSSLLLYETKSRISA-----EAALRHSYF  288 (288)
T ss_pred             hHHhCCCCCHHHHHHHHHhcCcCcccCCCH-----HHHhcCCCC
Confidence                 2468899999999999999999985     999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.40  E-value=6.8e-07  Score=82.67  Aligned_cols=83  Identities=19%  Similarity=0.221  Sum_probs=60.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc-----------------------CCC------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR-----------------------GKL------   50 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~-----------------------~~~------   50 (258)
                      |++.+  ...|+.++|+        +|++|++||.+.+....+..|..                       ...      
T Consensus       174 E~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (372)
T cd07853         174 EILMG--SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLP  251 (372)
T ss_pred             HHHcC--CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchH
Confidence            55554  2346677773        88999999998877665554432                       111      


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          51 ---ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        51 ---~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                         .+...++.++.+||.+||..||.+|+++     .++++||||.+..|
T Consensus       252 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~~~~  296 (372)
T cd07853         252 VLYTLSSQATHEAVHLLCRMLVFDPDKRISA-----ADALAHPYLDEGRL  296 (372)
T ss_pred             HhcccCCCCCHHHHHHHHHhCCCChhhCcCH-----HHHhcCHhhCCCcc
Confidence               1223468899999999999999999985     99999999998654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00284 protein kinase; Provisional

Probab=98.40  E-value=2e-07  Score=89.23  Aligned_cols=80  Identities=16%  Similarity=0.161  Sum_probs=56.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC-------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP-------------------------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P-------------------------   53 (258)
                      =|++.+   ..|+.++|+        +|++|++||.+.+..+....|....-.+|                         
T Consensus       314 PE~~~~---~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  390 (467)
T PTZ00284        314 PEVVLG---LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC  390 (467)
T ss_pred             cHHhhc---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccccc
Confidence            367765   467888884        88999999988776554443322110000                         


Q ss_pred             ---C--------------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 ---P--------------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 ---~--------------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                         .              .-+..+.|||.+||+.||.+|+++     ++|++||||..
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta-----~e~L~Hp~~~~  443 (467)
T PTZ00284        391 TDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA-----RQMTTHPYVLK  443 (467)
T ss_pred             CCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH-----HHHhcCccccc
Confidence               0              013567899999999999999985     99999999974

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.36  E-value=4.3e-07  Score=81.27  Aligned_cols=85  Identities=18%  Similarity=0.200  Sum_probs=58.0

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCC-CHHHHHHHHHcC--CC---------------------CCCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTAD-NRKKTIEKILRG--KL---------------------ILPP   54 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~-~~~~l~~~Il~~--~~---------------------~~P~   54 (258)
                      -|++.+  ...++..+|+        +|++|.+||.+. +.......+...  ..                     ..|.
T Consensus       172 PE~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T cd07869         172 PDVLLG--STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK  249 (303)
T ss_pred             hHHHcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence            466654  2457777773        888999999864 333333333210  00                     0011


Q ss_pred             ---------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          55 ---------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        55 ---------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                               .++.++++||.+||+.||.+|+++     .++++||||..+++.
T Consensus       250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~-----~~~l~h~~f~~~~~~  297 (303)
T cd07869         250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA-----QAALSHEYFSDLPPR  297 (303)
T ss_pred             cHHHHhhccCCChHHHHHHHHHhccCchhccCH-----HHHhcCcccccCChh
Confidence                     245789999999999999999985     999999999988753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.34  E-value=5.3e-07  Score=80.88  Aligned_cols=82  Identities=21%  Similarity=0.400  Sum_probs=59.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++..+|+        +|++|.+||.+.+..+....+...                   ...+|      
T Consensus       173 PE~~~~--~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
T cd07872         173 PDVLLG--SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQP  250 (309)
T ss_pred             CHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCc
Confidence            455554  2346777773        888999999887766555444321                   11122      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                           ..++.++++||.+||..||.+|+++     .+++.||||+++
T Consensus       251 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~~~~~  292 (309)
T cd07872         251 LINHAPRLDTEGIELLTKFLQYESKKRISA-----EEAMKHAYFRSL  292 (309)
T ss_pred             hhhhccCCCHHHHHHHHHhccCChhhCCCH-----HHHhcChhhhhc
Confidence                 2478899999999999999999985     999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0198|consensus

Probab=98.31  E-value=7.2e-07  Score=81.71  Aligned_cols=78  Identities=24%  Similarity=0.424  Sum_probs=62.8

Q ss_pred             ccccCCCCCCCCc--eeh-H-------hhhcCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTK--AER-N-------ILEAVKPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~--~vD-~-------~ml~G~pPF~~-~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      ||+.+    |+..  ++| |       +|++|.+||.. .........|....  +.+|..+|.++++||.+||.+||.+
T Consensus       191 Evi~~----g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~  266 (313)
T KOG0198|consen  191 EVIRN----GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEK  266 (313)
T ss_pred             hhhcC----CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCccc
Confidence            77773    4433  666 3       99999999987 45555556666544  6788999999999999999999999


Q ss_pred             ccCCCCCCchhhccCCcccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |.++     ++++.|||...
T Consensus       267 Rpta-----~eLL~hpf~~~  281 (313)
T KOG0198|consen  267 RPTA-----EELLEHPFLKQ  281 (313)
T ss_pred             CcCH-----HHHhhChhhhc
Confidence            9985     99999999975

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.30  E-value=1.1e-06  Score=78.33  Aligned_cols=83  Identities=24%  Similarity=0.402  Sum_probs=60.0

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++..+|+        +|++|++||.+.+..+....|...                   ...+|      
T Consensus       173 PE~~~~--~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (301)
T cd07873         173 PDILLG--STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC  250 (301)
T ss_pred             cHHHhC--CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccccc
Confidence            455554  2456666773        889999999988776655443321                   11122      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                           ..++.++++||.+||+.||.+|+++     ++|+.||||..+.
T Consensus       251 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-----~eil~h~~f~~~~  293 (301)
T cd07873         251 LHNHAPRLDSDGAELLSKLLQFEGRKRISA-----EEAMKHPYFHCLG  293 (301)
T ss_pred             HHhhcCCCCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccccc
Confidence                 2468899999999999999999985     9999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.29  E-value=1.6e-06  Score=77.71  Aligned_cols=81  Identities=23%  Similarity=0.320  Sum_probs=61.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++...|+        +|++|.+||.+.+....+..|...                   .+.++      
T Consensus       177 PE~~~~--~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
T cd07845         177 PELLLG--CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNN  254 (309)
T ss_pred             hhhhcC--CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCc
Confidence            466654  3456777773        888999999988888777766541                   11111      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                           ..+++++++||.+||..||.+|++.     ++|+.||||..
T Consensus       255 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-----~~il~h~~f~~  295 (309)
T cd07845         255 LKHKFPWLSEAGLRLLNFLLMYDPKKRATA-----EEALESSYFKE  295 (309)
T ss_pred             hHHhccccCHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcc
Confidence                 1258899999999999999999985     99999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.28  E-value=1e-06  Score=77.54  Aligned_cols=81  Identities=20%  Similarity=0.285  Sum_probs=58.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l----~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..++..+|+        +|++|..||.......+    +..........+..++..+++||.+||+.+|.+
T Consensus       175 PE~~~~---~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  251 (267)
T PHA03390        175 PEKIKG---HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINY  251 (267)
T ss_pred             hhhhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhh
Confidence            456654   346666663        88899999986543321    122223445566679999999999999999999


Q ss_pred             ccCCCCCCchhhccCCcccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |+++    +++|++||||.+
T Consensus       252 R~~~----~~~~l~h~~~~~  267 (267)
T PHA03390        252 RLTN----YNEIIKHPFLKI  267 (267)
T ss_pred             CCch----HHHHhcCCcccC
Confidence            9964    599999999974

>PF00433 Pkinase_C: Protein kinase C terminal domain; InterPro: IPR017892 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.28  E-value=3.6e-07  Score=60.73  Aligned_cols=45  Identities=53%  Similarity=0.851  Sum_probs=31.5

Q ss_pred             CCCCCCCCCCChhcccCCCCCCCC-c-cccccccCCCccCeeeeCch
Q psy1025         113 LTGEDDVSQFDTKFTRQTPVDSPD-E-SLLSESANLVFQGFTYVAPS  157 (258)
Q Consensus       113 ~~~~~D~s~Fd~~f~~~~~~~s~~-~-~~~~~~~~~~F~gFsy~~~~  157 (258)
                      |++..|++|||++|+.+.+..++. . ..+....+..|.||||++++
T Consensus         2 v~~~~DtsnFD~eFt~~~~~~t~~~~~~~~~~~~~~~F~GFTy~~~s   48 (48)
T PF00433_consen    2 VKSETDTSNFDPEFTEEPPVDTPPSDPSPLSSSMQENFQGFTYVNPS   48 (48)
T ss_dssp             -SSTT-GTTSCHHHHTSSSSS--S--HHHHCTSSGGGGTT-CEETCT
T ss_pred             CCchhhhhhcCcccccCCCCCCCcccCCcccccccCcCCCCeecCCC
Confidence            577899999999999999999885 2 33445555669999999874

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain is found in a large variety of protein kinases with different functions and dependencies. Protein kinase C, for example, is a calcium-activated, phospholipid-dependent serine- and threonine-specific enzyme. It is activated by diacylglycerol which, in turn, phosphorylates a range of cellular proteins. This domain is most often found associated with IPR000719 from INTERPRO.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3E8D_A 1MRV_A 3E88_A 1GZO_A 1GZK_A 2JDO_A 2JDR_A 1MRY_A 1GZN_A 1O6L_A ....

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.27  E-value=1.8e-06  Score=76.62  Aligned_cols=79  Identities=18%  Similarity=0.301  Sum_probs=63.4

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++|.+||...+....+.++....   ...|..++.++.+||.+||..+|.+|++.     ++
T Consensus       191 ~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~  265 (292)
T cd06644         191 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSA-----AQ  265 (292)
T ss_pred             CCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCH-----HH
Confidence            35556673        8889999998877776666665442   23355688999999999999999999975     99


Q ss_pred             hccCCccccCChhhh
Q psy1025          86 VRVHPFFRSINWSDV  100 (258)
Q Consensus        86 Ik~HpfF~~idW~~l  100 (258)
                      |++||||..++|...
T Consensus       266 il~~~~~~~~~~~~~  280 (292)
T cd06644         266 LLEHPFVSSVTSNRP  280 (292)
T ss_pred             HhcCccccccccchh
Confidence            999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.27  E-value=1.1e-06  Score=81.01  Aligned_cols=79  Identities=14%  Similarity=0.245  Sum_probs=57.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC----------------------CC-----
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK----------------------LI-----   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~----------------------~~-----   51 (258)
                      -|++.+   ..++..+|.        +|++|.+||.+.+....+.+|+..-                      ..     
T Consensus       194 PE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (364)
T cd07875         194 PEVILG---MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS  270 (364)
T ss_pred             HHHHhC---CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCC
Confidence            366664   456667773        8899999999887766666554310                      00     


Q ss_pred             ---------CC------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          52 ---------LP------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        52 ---------~P------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                               +|      ...+.++++||.+||..||.+|+++     +++++||||.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~-----~e~L~hp~~~  322 (364)
T cd07875         271 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-----DEALQHPYIN  322 (364)
T ss_pred             hHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH-----HHHhcCcccc
Confidence                     01      1135678999999999999999985     9999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.24  E-value=2.4e-06  Score=73.36  Aligned_cols=66  Identities=47%  Similarity=0.867  Sum_probs=58.8

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+...++..+....+.+|..++.+..++|.+||..||.+|++...  ++++++||||
T Consensus       185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~--~~~l~~~~~f  250 (250)
T cd05123         185 EMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG--AEEIKAHPFF  250 (250)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc--HHHHHhCCCC
Confidence            77899999988888888888888888889999999999999999999999998521  4899999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.22  E-value=1.9e-06  Score=76.01  Aligned_cols=78  Identities=17%  Similarity=0.295  Sum_probs=57.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----C------CC----------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----K------LI----------------   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----~------~~----------------   51 (258)
                      -|++.+   ..++..+|+        +|++|.+||.+.+....+.+|...     .      ..                
T Consensus       176 PE~~~~---~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07863         176 PEVLLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQS  252 (288)
T ss_pred             chHhhC---CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHH
Confidence            356654   457777773        788999999888777666655431     0      00                


Q ss_pred             CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        52 ~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      ..+.++.++++||.+||..||.+|+++     .+++.||||
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~-----~~~l~hp~f  288 (288)
T cd07863         253 VVPEIEESGAQLLLEMLTFNPHKRISA-----FRALQHPFF  288 (288)
T ss_pred             hCcCcCHHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence            012467889999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.18  E-value=3.3e-06  Score=73.65  Aligned_cols=67  Identities=39%  Similarity=0.669  Sum_probs=58.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|.+||...+....+..+......+|..+++.+.+||.+||..+|.+|+++ ..+.++|++||||
T Consensus       214 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~~~~ll~~~~~  280 (280)
T cd05581         214 QMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV-NEGYDELKAHPFF  280 (280)
T ss_pred             HHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc-ccCHHHHhcCCCC
Confidence            778999999988888888888888888899999999999999999999999984 1234899999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.18  E-value=3.4e-06  Score=72.85  Aligned_cols=78  Identities=21%  Similarity=0.404  Sum_probs=61.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      -|++.+   ..++..+|+        +|++|..||...+.......+....+ ..|..++.++.+||.+||..+|..|++
T Consensus       171 PE~~~~---~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  247 (257)
T cd08223         171 PELFSN---KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPS  247 (257)
T ss_pred             hhHhcC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCC
Confidence            355553   345556663        88899999998888777777766554 456678999999999999999999997


Q ss_pred             CCCCCchhhccCCcc
Q psy1025          78 SGPNDGEAVRVHPFF   92 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF   92 (258)
                      .     .+|++||||
T Consensus       248 ~-----~~~l~~~~~  257 (257)
T cd08223         248 V-----KSILRQPYI  257 (257)
T ss_pred             H-----HHHhcCCCC
Confidence            5     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.18  E-value=1.9e-06  Score=76.12  Aligned_cols=77  Identities=18%  Similarity=0.237  Sum_probs=57.8

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCC-----CC----------------------C
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGK-----LI----------------------L   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~-----~~----------------------~   52 (258)
                      |++.+   ..++..+|        |+|++|.+||.+.+....+..|....     ..                      +
T Consensus       179 E~~~~---~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (290)
T cd07862         179 EVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF  255 (290)
T ss_pred             HHHhC---CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHH
Confidence            55553   35666677        28889999999888777776665321     00                      1


Q ss_pred             CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        53 P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      ...++..+++||.+||..||.+|+++     .++++||||
T Consensus       256 ~~~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~hp~f  290 (290)
T cd07862         256 VTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYF  290 (290)
T ss_pred             ccCCCHHHHHHHHHHhccCchhcCCH-----HHHhcCCCC
Confidence            12467889999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0660|consensus

Probab=98.18  E-value=2.3e-06  Score=78.55  Aligned_cols=83  Identities=25%  Similarity=0.352  Sum_probs=64.8

Q ss_pred             cccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC-----------------------CCCCC
Q psy1025           5 RKASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG-----------------------KLILP   53 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~-----------------------~~~~P   53 (258)
                      |--||+.+  ...|++++| |       +||+|+|-|.|.+....+..|+..                       -...|
T Consensus       194 RAPElll~--~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p  271 (359)
T KOG0660|consen  194 RAPELLLN--SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIP  271 (359)
T ss_pred             cCHHHHhc--cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCC
Confidence            34578876  689999999 4       999999999988766555544431                       11222


Q ss_pred             --------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 --------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 --------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                              +..++.|.||+.+||..||.+|++.     +|.++|||+..
T Consensus       272 ~~~f~~~fp~a~p~AidLlekmL~fdP~kRita-----~eAL~hPYl~~  315 (359)
T KOG0660|consen  272 KQPFSSIFPNANPLAIDLLEKMLVFDPKKRITA-----EEALAHPYLAP  315 (359)
T ss_pred             CCCHHHHcCCCCHHHHHHHHHHhccCccccCCH-----HHHhcChhhhh
Confidence                    2578999999999999999999985     99999999974

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.16  E-value=3.1e-06  Score=79.16  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=37.4

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhh
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                      ++.++++||++||..||.+|+++     .+|+.||||...+|+.+.
T Consensus       347 ~~~~~~~li~~ml~~dp~~Rpsa-----~e~l~~p~f~~~~~~~~~  387 (392)
T PHA03207        347 MHMDVEYLIAKMLTFDQEFRPSA-----QDILSLPLFTKEPINLLN  387 (392)
T ss_pred             cchhHHHHHHHHhccChhhCCCH-----HHHhhCchhhccchhhhc
Confidence            56789999999999999999985     999999999999999873

>KOG0593|consensus

Probab=98.14  E-value=2.3e-06  Score=77.49  Aligned_cols=83  Identities=23%  Similarity=0.318  Sum_probs=64.2

Q ss_pred             cccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHc--------------CC-----CCCCC---
Q psy1025           5 RKASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILR--------------GK-----LILPP---   54 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~--------------~~-----~~~P~---   54 (258)
                      |--|.+-|  .+.|+++|| |       +|++|.|-|.+.+.......|..              ..     +.+|.   
T Consensus       168 RaPELLvG--DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~  245 (396)
T KOG0593|consen  168 RAPELLVG--DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEH  245 (396)
T ss_pred             cChhhhcc--cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCC
Confidence            44578887  589999999 4       99999999998766554444432              11     22331   


Q ss_pred             ---------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 ---------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 ---------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                               .++.-+.||+++||..||.+|+++     ++++.|+||.+
T Consensus       246 ~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc-----~qll~H~yFd~  289 (396)
T KOG0593|consen  246 PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSC-----EQLLHHPYFDG  289 (396)
T ss_pred             ccchhhhcccchHHHHHHHHHHhcCCccccccH-----HHHhcChHHHH
Confidence                     367889999999999999999998     99999999954

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.13  E-value=2.6e-06  Score=75.20  Aligned_cols=89  Identities=16%  Similarity=0.210  Sum_probs=61.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCC-CCCC----CCCCHHHHHHHHHHhhcccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGK-LILP----PYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~-~~~P----~~~S~ea~dLI~~LL~kdP~   73 (258)
                      |++.+..+..++..+|+        +|++|++||...+. ......+.... ..++    ..++.++.+||.+||.++|.
T Consensus       177 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  256 (288)
T cd06616         177 ERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDES  256 (288)
T ss_pred             HHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChh
Confidence            55554222457777773        88899999976442 12222222222 2222    24789999999999999999


Q ss_pred             cccCCCCCCchhhccCCccccCChhhhh
Q psy1025          74 QRLGSGPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                      +|++.     ++|++||||+...|....
T Consensus       257 ~Rpt~-----~~i~~~~~~~~~~~~~~~  279 (288)
T cd06616         257 KRPKY-----KELLEHPFIKDYEERNVD  279 (288)
T ss_pred             hCcCH-----HHHhcChhhhchhhcchh
Confidence            99985     999999999987776553

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.11  E-value=4.4e-06  Score=76.50  Aligned_cols=74  Identities=20%  Similarity=0.314  Sum_probs=55.1

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC-------------------------------CCCCCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI-------------------------------LPPYLT   57 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~-------------------------------~P~~~S   57 (258)
                      .++..+|+        +|++|.+||.+.+....+..|+.....                               +...++
T Consensus       192 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (343)
T cd07880         192 HYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNAN  271 (343)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCC
Confidence            46666773        778999999887765555544332111                               113578


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      .++.+||.+||.+||.+|+++     .+++.||||+.+
T Consensus       272 ~~~~~li~~~l~~dP~~R~t~-----~~~l~~~~~~~~  304 (343)
T cd07880         272 PLAVNVLEKMLVLDAESRITA-----AEALAHPYFEEF  304 (343)
T ss_pred             hHHHHHHHHHcCCChhhCCCH-----HHHhcCccHhhh
Confidence            889999999999999999985     999999999854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.11  E-value=3.9e-06  Score=75.78  Aligned_cols=84  Identities=21%  Similarity=0.251  Sum_probs=57.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc--------------------------CC--CC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR--------------------------GK--LI   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~--------------------------~~--~~   51 (258)
                      |++.+. ...++.++|+        +|++|++||.+.+.......+..                          ..  ..
T Consensus       176 E~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  254 (338)
T cd07859         176 ELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP  254 (338)
T ss_pred             HHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCc
Confidence            555531 2356777773        88899999987665433221110                          00  01


Q ss_pred             CC---CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          52 LP---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        52 ~P---~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +.   +.++.++.+||.+||..||.+|+++     ++|++||||.++..
T Consensus       255 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~e~l~hp~f~~~~~  298 (338)
T cd07859         255 FSQKFPNADPLALRLLERLLAFDPKDRPTA-----EEALADPYFKGLAK  298 (338)
T ss_pred             hHHhcCCCChHHHHHHHHHcCcCcccCCCH-----HHHhcCchhhhcCc
Confidence            10   1367889999999999999999985     99999999987654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.11  E-value=6e-06  Score=71.38  Aligned_cols=63  Identities=27%  Similarity=0.399  Sum_probs=55.0

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+....+..++.... ..|..++.+.++||.+||..+|.+|++.     .+|+.||||
T Consensus       193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~vl~~~~~  256 (256)
T cd08218         193 EMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSV-----NSILEKNFI  256 (256)
T ss_pred             HHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCH-----HHHhhCcCC
Confidence            78899999998888888888776553 3567789999999999999999999985     999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.09  E-value=5.2e-06  Score=76.28  Aligned_cols=34  Identities=26%  Similarity=0.474  Sum_probs=30.8

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      .+.++++||.+||..||.+|+++     .+++.||||..
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~  320 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISV-----DEALRHPYITV  320 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCH-----HHHhcCchhhh
Confidence            46789999999999999999985     99999999973

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.08  E-value=5.1e-06  Score=72.77  Aligned_cols=71  Identities=23%  Similarity=0.347  Sum_probs=53.7

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------CCCCC-----------CCCCHH
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------KLILP-----------PYLTPD   59 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------~~~~P-----------~~~S~e   59 (258)
                      .++...|+        +|++|.+||.+.+..+.+..+...                  .+.+|           ..++.+
T Consensus       175 ~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd07831         175 YYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAE  254 (282)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHH
Confidence            35566673        888999999988776665554321                  11222           246799


Q ss_pred             HHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          60 ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        60 a~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +++||.+||.++|.+|+++     ++|+.||||
T Consensus       255 ~~~li~~~l~~~P~~R~~~-----~~~l~~~~~  282 (282)
T cd07831         255 GLDLLKKLLAYDPDERITA-----KQALRHPYF  282 (282)
T ss_pred             HHHHHHHHhccCcccccCH-----HHHhhCCCC
Confidence            9999999999999999985     999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.07  E-value=6.9e-06  Score=71.45  Aligned_cols=63  Identities=21%  Similarity=0.314  Sum_probs=51.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+....+..+... ...+|..++.++++||.+||..||.+|++.     .+|++|+||
T Consensus       204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~  267 (267)
T cd06628         204 EMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTA-----AELLKHPFL  267 (267)
T ss_pred             HHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCH-----HHHhhCCCC
Confidence            888999999876665555555443 345677889999999999999999999985     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.07  E-value=5.3e-06  Score=75.16  Aligned_cols=36  Identities=22%  Similarity=0.505  Sum_probs=32.5

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      +++++++||.+||+.||.+|+++     +++.+||||+.+.
T Consensus       279 ~~~~~~~li~~~l~~dP~~Rpt~-----~ell~~p~f~~~~  314 (327)
T cd08227         279 FSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFKQIK  314 (327)
T ss_pred             cCHHHHHHHHHHHhhCchhcCCH-----HHHhcChhhhhcc
Confidence            56789999999999999999985     9999999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.06  E-value=4.5e-06  Score=72.05  Aligned_cols=72  Identities=28%  Similarity=0.412  Sum_probs=54.3

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      .++...|+        +|++|.+||...... ..   ....+.+|..++.++++||.+||..||.+|++.+..+++++++
T Consensus       158 ~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  233 (237)
T cd05576         158 EETEACDWWSLGAILFELLTGKTLVECHPSG-IN---THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKS  233 (237)
T ss_pred             CCCchhhHHHHHHHHHHHHHCcchhhcCchh-cc---cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHc
Confidence            45556663        788999988643221 00   0123457788999999999999999999999976677899999


Q ss_pred             CCcc
Q psy1025          89 HPFF   92 (258)
Q Consensus        89 HpfF   92 (258)
                      ||||
T Consensus       234 h~~~  237 (237)
T cd05576         234 HPFF  237 (237)
T ss_pred             CCCC
Confidence            9998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.05  E-value=7e-06  Score=75.04  Aligned_cols=81  Identities=17%  Similarity=0.187  Sum_probs=58.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC---------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI---------------------------   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~---------------------------   51 (258)
                      .|++.+  ...++..+|+        +|++|++||.+.+....+..|+...-.                           
T Consensus       184 PE~~~~--~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07851         184 PEIMLN--WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKK  261 (343)
T ss_pred             HHHHhC--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCC
Confidence            455554  2356666773        888999999887776666655432100                           


Q ss_pred             -C---CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          52 -L---PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        52 -~---P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                       +   ...++.++.+||.+||..||.+|+++     .+|+.||||..
T Consensus       262 ~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~-----~ell~h~~~~~  303 (343)
T cd07851         262 DFKEVFSGANPLAIDLLEKMLVLDPDKRITA-----AEALAHPYLAE  303 (343)
T ss_pred             CHHHHhccCCHHHHHHHHHhCCCChhhCCCH-----HHHhcCCCccc
Confidence             0   12358899999999999999999985     99999999983

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.05  E-value=9.9e-06  Score=71.20  Aligned_cols=69  Identities=20%  Similarity=0.330  Sum_probs=57.3

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +|++|.+||...+......++....   +..|..++.++.+||.+||..+|.+|++.     ++|++|+||....+.
T Consensus       200 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~~~~~  271 (280)
T cd06611         200 ELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTA-----AELLKHPFVSDQSDN  271 (280)
T ss_pred             HHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCH-----HHHhcChhhcccchh
Confidence            8889999999887777777776543   23456789999999999999999999985     999999999876544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.04  E-value=4.3e-06  Score=75.77  Aligned_cols=83  Identities=17%  Similarity=0.283  Sum_probs=58.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC--------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL--------------------------   52 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~--------------------------   52 (258)
                      -|++.+. ..+++..+|+        +|++|.+||...........++......                          
T Consensus       177 PE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (328)
T cd08226         177 PELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG  255 (328)
T ss_pred             hhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence            3566542 2346777883        8889999998766555544443322111                          


Q ss_pred             ---------------------CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          53 ---------------------PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        53 ---------------------P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                                           +..++..+++||++||+.||.+|+++     +++++|+||..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta-----~e~l~~~~~~~~  314 (328)
T cd08226         256 ESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSA-----SSLLSHAFFKQV  314 (328)
T ss_pred             cchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCH-----HHHhhCHHHHHH
Confidence                                 12356789999999999999999985     999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0586|consensus

Probab=98.03  E-value=1.7e-06  Score=83.98  Aligned_cols=79  Identities=23%  Similarity=0.343  Sum_probs=68.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.|.+|.|  -.||        |.|+.|..||.+.+..++-.+.+.+++.+|.++|.+|++||+++|..+|.+|.++ 
T Consensus       224 El~~g~~y~g--pe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~-  300 (596)
T KOG0586|consen  224 ELFNGKKYDG--PEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPC-  300 (596)
T ss_pred             HhhcCcccCC--cceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCH-
Confidence            6777754432  2344        3778899999999999999999999999999999999999999999999999987 


Q ss_pred             CCCchhhccCCccc
Q psy1025          80 PNDGEAVRVHPFFR   93 (258)
Q Consensus        80 ~~g~~eIk~HpfF~   93 (258)
                          ++|+.|.|..
T Consensus       301 ----dqim~~~W~n  310 (596)
T KOG0586|consen  301 ----DQIMKDRWRN  310 (596)
T ss_pred             ----HHhhhhcccc
Confidence                9999999975

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.03  E-value=9.5e-06  Score=70.29  Aligned_cols=78  Identities=22%  Similarity=0.342  Sum_probs=59.8

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++...|        |+|++|++||...+......++...  ...+|..++.++.+||.+||.++|.+|+
T Consensus       176 PE~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (263)
T cd06625         176 PEVISG---EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRP  252 (263)
T ss_pred             cceecc---CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCC
Confidence            355554   23555566        3888999999877666555555443  3456778999999999999999999999


Q ss_pred             CCCCCCchhhccCCcc
Q psy1025          77 GSGPNDGEAVRVHPFF   92 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF   92 (258)
                      +.     .+|++|+||
T Consensus       253 t~-----~~ll~~~~~  263 (263)
T cd06625         253 SA-----EELLRHFFV  263 (263)
T ss_pred             CH-----HHHhhCCCC
Confidence            74     999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.03  E-value=7.8e-06  Score=71.90  Aligned_cols=79  Identities=23%  Similarity=0.360  Sum_probs=55.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---C---------------CCC--------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---K---------------LIL--------   52 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~---------------~~~--------   52 (258)
                      -|++.+  ...++...|+        +|++|+.||...+......++...   .               ..+        
T Consensus       169 PE~~~~--~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07860         169 PEILLG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF  246 (284)
T ss_pred             CeEEec--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH
Confidence            455554  2335666663        888999999887665544433321   0               011        


Q ss_pred             ---CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          53 ---PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        53 ---P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                         ...++.++++||.+||..||.+|++.     ++++.||||
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~f  284 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISA-----KAALAHPFF  284 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCH-----HHHhcCCCC
Confidence               12478899999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.03  E-value=6.3e-06  Score=73.96  Aligned_cols=32  Identities=31%  Similarity=0.469  Sum_probs=29.3

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .+.++.+||++||+.||.+|+++     +++++||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t~-----~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRITS-----EQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence            35679999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.03  E-value=1e-05  Score=70.40  Aligned_cols=77  Identities=17%  Similarity=0.243  Sum_probs=58.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|.        +|++|.+||...+.......+...   ....|..++.++++||.+||.++|.+|+
T Consensus       178 e~~~~---~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  254 (265)
T cd06631         178 EVINE---SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERP  254 (265)
T ss_pred             hhhcC---CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCC
Confidence            55553   456666773        888999999876655544444433   2345667899999999999999999999


Q ss_pred             CCCCCCchhhccCCcc
Q psy1025          77 GSGPNDGEAVRVHPFF   92 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF   92 (258)
                      +.     .+|+.||||
T Consensus       255 ~~-----~~~l~~~~~  265 (265)
T cd06631         255 SA-----LQLLRHDFL  265 (265)
T ss_pred             CH-----HHHhcCCCC
Confidence            75     999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.02  E-value=1.1e-05  Score=71.47  Aligned_cols=71  Identities=23%  Similarity=0.254  Sum_probs=55.9

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      ++..+|+        +|++|++||...+.......+....   +..|..++.++++||.+||..+|.+|++.     .+|
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~i  284 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSV-----THL  284 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCH-----HHH
Confidence            5666773        8889999998877666556665442   23355678899999999999999999985     999


Q ss_pred             ccCCccc
Q psy1025          87 RVHPFFR   93 (258)
Q Consensus        87 k~HpfF~   93 (258)
                      +.||||+
T Consensus       285 l~~~~~~  291 (291)
T cd06639         285 LEHPFIK  291 (291)
T ss_pred             hcCcccC
Confidence            9999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.02  E-value=7.8e-06  Score=74.46  Aligned_cols=81  Identities=20%  Similarity=0.260  Sum_probs=57.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC---
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------LILP---   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~~~P---   53 (258)
                      |++.+  ...++..+|.        +|++|.+||.+.+....+..+....                       ...|   
T Consensus       185 E~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (343)
T cd07878         185 EIMLN--WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQD  262 (343)
T ss_pred             hHhcC--CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchh
Confidence            56654  3457777873        8889999998877655554443210                       0111   


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                           ...++.+.+||.+||..||.+|+++     .+++.||||...
T Consensus       263 ~~~~~~~~~~~~~~li~~mL~~dp~~R~s~-----~ell~hp~~~~~  304 (343)
T cd07878         263 LKKIFRGANPLAIDLLEKMLVLDSDKRISA-----SEALAHPYFSQY  304 (343)
T ss_pred             HHHhccCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcchhcc
Confidence                 1356778999999999999999985     999999999753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.02  E-value=9.1e-06  Score=70.46  Aligned_cols=79  Identities=24%  Similarity=0.383  Sum_probs=59.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCC---HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADN---RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~---~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++...|        |+|++|..||...+   ...+...+......+|..++.++.++|.+||.+||.+|+
T Consensus       169 E~~~~---~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  245 (258)
T cd05578         169 EVLCR---QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRL  245 (258)
T ss_pred             HHHcc---cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcC
Confidence            55553   23555566        38889999998776   344444444456677888999999999999999999999


Q ss_pred             CCCCCCchhhccCCcc
Q psy1025          77 GSGPNDGEAVRVHPFF   92 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF   92 (258)
                      +.  . ..++++||||
T Consensus       246 ~~--~-~~~l~~~~~~  258 (258)
T cd05578         246 GD--N-LKDLKNHPYF  258 (258)
T ss_pred             Cc--c-HHHHhcCCCC
Confidence            84  1 5899999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.02  E-value=1.1e-05  Score=73.79  Aligned_cols=75  Identities=24%  Similarity=0.351  Sum_probs=55.3

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-------------------------CC-----CCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-------------------------LI-----LPPYLT   57 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-------------------------~~-----~P~~~S   57 (258)
                      ..++..+|.        +|++|..||.+.+.......++...                         ..     +...++
T Consensus       194 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (342)
T cd07854         194 NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVN  273 (342)
T ss_pred             cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCC
Confidence            456666773        8889999998777655554443210                         00     112478


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      .++++||.+||..||.+|+++     ++|+.||||+.+
T Consensus       274 ~~~~~li~~~L~~dP~~R~t~-----~ell~h~~~~~~  306 (342)
T cd07854         274 PEALDFLEQILTFNPMDRLTA-----EEALMHPYMSCY  306 (342)
T ss_pred             HHHHHHHHHHhCCCchhccCH-----HHHhCCCccccc
Confidence            899999999999999999985     999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4279|consensus

Probab=98.01  E-value=5e-06  Score=82.35  Aligned_cols=92  Identities=15%  Similarity=0.304  Sum_probs=70.9

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCC--CCHHHHHHH-HHcCCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTA--DNRKKTIEK-ILRGKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~--~~~~~l~~~-Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |||-. +-.||++++| |       +|.+|+|||..  .....+|.- ..+..+.+|..+|.+|+.+|.+++..||..|.
T Consensus       746 EvIDq-G~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~  824 (1226)
T KOG4279|consen  746 EVIDQ-GPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRP  824 (1226)
T ss_pred             Hhhcc-CCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCc
Confidence            66653 3579999999 4       99999999973  334445543 33556788999999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      .+     .+++..||.+.-      .|+..|+..+
T Consensus       825 sA-----~~LL~DpFlq~~------~kk~r~~ls~  848 (1226)
T KOG4279|consen  825 SA-----KDLLQDPFLQHN------NKKPRPKLSL  848 (1226)
T ss_pred             cH-----HHhccCcccccC------CCCCCCCCCc
Confidence            85     899999999743      3556665554

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.01  E-value=8.4e-06  Score=71.60  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=54.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------CC----------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------KL----------   50 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------~~----------   50 (258)
                      -|++.+  ...++...|+        +|++|.+||.+.+.......+...                  ..          
T Consensus       170 PE~~~~--~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
T cd07861         170 PEVLLG--SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSL  247 (285)
T ss_pred             hHHhcC--CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchh
Confidence            366654  2345666673        888999999876654333222110                  00          


Q ss_pred             -CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          51 -ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        51 -~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                       .....++.++++||.+||..||.+|++.     .+|+.||||
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-----~~ll~~~~~  285 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISA-----KKALNHPYF  285 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCH-----HHHhcCCCC
Confidence             0122478999999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.00  E-value=9.4e-06  Score=71.77  Aligned_cols=79  Identities=23%  Similarity=0.446  Sum_probs=57.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------CCCC---------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------LILP---------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------~~~P---------   53 (258)
                      |++.+  ...++..+|+        +|++|.+||.+.+......+|....                 ..+|         
T Consensus       181 E~~~~--~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (295)
T cd07837         181 EVLLG--STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSR  258 (295)
T ss_pred             HHhhC--CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHH
Confidence            55554  2446677773        8889999998877665555443210                 0011         


Q ss_pred             --CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          54 --PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        54 --~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                        +.++.++.+||.+||..||.+|++.     ++|+.||||+
T Consensus       259 ~~~~~~~~~~~~i~~~l~~~P~~R~~~-----~eil~~~~~~  295 (295)
T cd07837         259 AVPDLSPEGLDLLQKMLRYDPAKRISA-----KAALTHPYFD  295 (295)
T ss_pred             hccccCHHHHHHHHHHccCChhhcCCH-----HHHhcCCCcC
Confidence              2478899999999999999999985     9999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG4645|consensus

Probab=98.00  E-value=3.7e-06  Score=87.68  Aligned_cols=81  Identities=16%  Similarity=0.253  Sum_probs=67.4

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCC--CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTA--DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~--~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |||-|-+.+||+.+.| |       +|.+|+.||..  .+..-+|.--.-..+.+|..+|.+.+|||..||..||..|..
T Consensus      1408 Evit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~ 1487 (1509)
T KOG4645|consen 1408 EVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWT 1487 (1509)
T ss_pred             hhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhH
Confidence            8899988899999999 4       99999999964  333334443345678999999999999999999999999987


Q ss_pred             CCCCCchhhccCCccc
Q psy1025          78 SGPNDGEAVRVHPFFR   93 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~   93 (258)
                      +     .+|++|.|-+
T Consensus      1488 ~-----~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1488 A-----SQLLEHAFGK 1498 (1509)
T ss_pred             H-----HHHHHhhccc
Confidence            4     7999999875

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.00  E-value=1.1e-05  Score=73.69  Aligned_cols=85  Identities=22%  Similarity=0.327  Sum_probs=60.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC--
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------LILP--   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~~~P--   53 (258)
                      -|++.+  ...++..+|+        +|++|+.||.+.+....+..|+...                       ..++  
T Consensus       183 PE~~~~--~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (342)
T cd07879         183 PEVILN--WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRK  260 (342)
T ss_pred             hhhhcC--ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccc
Confidence            355553  2346666773        8889999999877655554443310                       0111  


Q ss_pred             ------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          54 ------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        54 ------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                            +..+.++++||.+||..||.+|++.     ++++.||||..+.+.
T Consensus       261 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~-----~e~l~h~~f~~~~~~  306 (342)
T cd07879         261 DFSTLFPKASPQAVDLLEKMLELDVDKRLTA-----TEALEHPYFDSFRDA  306 (342)
T ss_pred             hHHHHhcCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCcchhhcccc
Confidence                  1367889999999999999999985     999999999987653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.99  E-value=9.5e-06  Score=70.22  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=58.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCC-----CCCCHHHHHHHHHHhhccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILP-----PYLTPDARELIRKLLKRQV   72 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P-----~~~S~ea~dLI~~LL~kdP   72 (258)
                      -|++...  ..++...|+        +|++|+.||...+....+..++.... .++     ..++.++++||.+||.+||
T Consensus       175 Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  252 (267)
T cd06610         175 PEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDP  252 (267)
T ss_pred             hHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCCh
Confidence            3555432  345555663        88899999998777766666655422 222     2578899999999999999


Q ss_pred             ccccCCCCCCchhhccCCcc
Q psy1025          73 AQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        73 ~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .+|++.     ++|+.||||
T Consensus       253 ~~Rp~~-----~~ll~~p~~  267 (267)
T cd06610         253 SKRPTA-----EELLKHKFF  267 (267)
T ss_pred             hhCcCH-----HHHhhCCCC
Confidence            999975     999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.99  E-value=1.3e-05  Score=69.96  Aligned_cols=72  Identities=17%  Similarity=0.177  Sum_probs=54.0

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..|+..+|+        +|++|.+||...........+......  .+..++.++++||.+||..+|.+|++.     .+
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~  265 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTT-----EQ  265 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCH-----HH
Confidence            356666773        888999999876655544444433211  234578999999999999999999985     99


Q ss_pred             hccCCcc
Q psy1025          86 VRVHPFF   92 (258)
Q Consensus        86 Ik~HpfF   92 (258)
                      |+.||||
T Consensus       266 il~~~~~  272 (272)
T cd06637         266 LMKHPFI  272 (272)
T ss_pred             HhhCCCC
Confidence            9999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.96  E-value=1.5e-05  Score=70.26  Aligned_cols=73  Identities=19%  Similarity=0.366  Sum_probs=58.1

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++|.+||...+.......+....   +..|..++.++++||.+||..+|.+|++.     ++
T Consensus       184 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~  258 (282)
T cd06643         184 PYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTT-----TQ  258 (282)
T ss_pred             CCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            35556663        7789999999887777766665432   33456789999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |++||||.-
T Consensus       259 il~~~~~~~  267 (282)
T cd06643         259 LLQHPFVTV  267 (282)
T ss_pred             HhcCCCEec
Confidence            999999973

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=97.96  E-value=1.4e-05  Score=70.00  Aligned_cols=82  Identities=11%  Similarity=0.214  Sum_probs=61.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-CCCCCCC-CCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-KLILPPY-LTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P~~-~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+.   .++..+|+        +|++|.+||...+.......|... ...++.. ++.++.++|.+||..+|.+|+
T Consensus       167 PE~~~~~---~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rp  243 (274)
T cd06609         167 PEVIKQS---GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERP  243 (274)
T ss_pred             hhhhccC---CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCc
Confidence            4555542   35556663        888999999887766666665544 3344444 889999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCC
Q psy1025          77 GSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~id   96 (258)
                      +.     ++|+.|+||....
T Consensus       244 t~-----~~il~~~~~~~~~  258 (274)
T cd06609         244 SA-----KELLKHKFIKKAK  258 (274)
T ss_pred             CH-----HHHhhChhhcCCC
Confidence            74     9999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.95  E-value=1.2e-05  Score=70.63  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=55.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------C-----
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------L-----   50 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~-----   50 (258)
                      -|++.+  ...++...|+        +|++|.+||...+......++....                       .     
T Consensus       168 PE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (283)
T cd07835         168 PEILLG--SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL  245 (283)
T ss_pred             Cceeec--CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch
Confidence            455554  2335556663        8889999998776654444332210                       0     


Q ss_pred             -CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          51 -ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        51 -~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                       .....++.++.+||.+||+.||.+|++.     ++|+.|+||
T Consensus       246 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~il~~~~~  283 (283)
T cd07835         246 SKVVPNLDEDGLDLLSKMLVYDPAKRISA-----KAALQHPYF  283 (283)
T ss_pred             hhhcCCCCHHHHHHHHHHhcCChhhCcCH-----HHHhcCCCC
Confidence             0123577899999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.93  E-value=7.4e-06  Score=72.62  Aligned_cols=83  Identities=22%  Similarity=0.347  Sum_probs=58.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---C------------------CC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---K------------------LI------   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~------------------~~------   51 (258)
                      -|++.+  ...++..+|+        +|++|.+||...+....+.++...   .                  ..      
T Consensus       172 PE~~~~--~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (294)
T PLN00009        172 PEILLG--SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDL  249 (294)
T ss_pred             HHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCH
Confidence            455554  2345666663        888999999887666555544321   0                  00      


Q ss_pred             --CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          52 --LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        52 --~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                        ....++.+++++|.+||..+|.+|++.     ++++.||||.+++
T Consensus       250 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~-----~~~l~~~~~~~~~  291 (294)
T PLN00009        250 ATVVPTLEPAGVDLLSKMLRLDPSKRITA-----RAALEHEYFKDLG  291 (294)
T ss_pred             HHhCcCCChHHHHHHHHHccCChhhCcCH-----HHHhcCchHhHHh
Confidence              113468899999999999999999974     9999999998643

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.92  E-value=1.4e-05  Score=73.24  Aligned_cols=79  Identities=16%  Similarity=0.271  Sum_probs=55.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC----------------------C-----CC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG----------------------K-----LI   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~----------------------~-----~~   51 (258)
                      -|++.+   ..++..+|.        +|++|+.||.+.+....+..++..                      .     +.
T Consensus       187 PE~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T cd07874         187 PEVILG---MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_pred             HHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccccc
Confidence            366664   456777773        888999999887755444332210                      0     01


Q ss_pred             C---------------CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          52 L---------------PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        52 ~---------------P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +               +...+.++++||.+||..||.+|+++     .+|++||||.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~-----~ell~hp~~~  315 (355)
T cd07874         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-----DEALQHPYIN  315 (355)
T ss_pred             chhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH-----HHHhcCcchh
Confidence            1               11245788999999999999999985     9999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.92  E-value=1.2e-05  Score=70.72  Aligned_cols=33  Identities=33%  Similarity=0.610  Sum_probs=30.7

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .++.++++||.+||..||.+|+++     ++|+.||||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~-----~~il~h~~f  284 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISA-----EEALQHPYF  284 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCH-----HHHhcCCCC
Confidence            468899999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.91  E-value=1.9e-05  Score=69.22  Aligned_cols=78  Identities=17%  Similarity=0.266  Sum_probs=56.1

Q ss_pred             CCCCceeh--------HhhhcCCCCCCCC-CHHHHHHHHHc-CCCCCCC-CCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAER--------NILEAVKPPFTAD-NRKKTIEKILR-GKLILPP-YLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD--------~~ml~G~pPF~~~-~~~~l~~~Il~-~~~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .+++..+|        |+|++|..||... +..+....+.. ....+|. .++.++++||.+||..+|.+|++.     +
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-----~  256 (283)
T cd06617         182 KGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNY-----P  256 (283)
T ss_pred             cccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCH-----H
Confidence            34566666        3888999999642 22222333333 3344443 578999999999999999999985     9


Q ss_pred             hhccCCccccCChh
Q psy1025          85 AVRVHPFFRSINWS   98 (258)
Q Consensus        85 eIk~HpfF~~idW~   98 (258)
                      +|+.||||....+.
T Consensus       257 ~il~~~~~~~~~~~  270 (283)
T cd06617         257 ELLQHPFFELHLSK  270 (283)
T ss_pred             HHhcCchhhhcccc
Confidence            99999999976554

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=97.91  E-value=1.5e-05  Score=71.95  Aligned_cols=82  Identities=22%  Similarity=0.306  Sum_probs=59.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC---------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI---------------------------   51 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~---------------------------   51 (258)
                      -|++.+.  ..++...|+        +|++|.+||.+.+..+.+..|....-.                           
T Consensus       175 PE~~~~~--~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (330)
T cd07834         175 PELLLSS--SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKK  252 (330)
T ss_pred             ceeeecc--cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcc
Confidence            4555542  256666663        788999999988877766665542100                           


Q ss_pred             ----CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          52 ----LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        52 ----~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                          ....++.++.+||.+||.++|.+|++.     ++++.||||.++
T Consensus       253 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~~  295 (330)
T cd07834         253 PLSKLFPGASPEAIDLLEKMLVFDPKKRITA-----DEALAHPYLAQL  295 (330)
T ss_pred             hhHHhcccCCHHHHHHHHHHccCChhhCCCH-----HHHHhCccHHhh
Confidence                012367889999999999999999985     999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=97.91  E-value=1.9e-05  Score=70.68  Aligned_cols=66  Identities=23%  Similarity=0.412  Sum_probs=53.2

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      +|++|.+||...+.......+...   .+..|..++..+++||.+||..||.+|++.     .+|+.||||...
T Consensus       207 ~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-----~~il~~~~~~~~  275 (296)
T cd06655         207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSA-----KELLQHPFLKLA  275 (296)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCH-----HHHhhChHhhhc
Confidence            888999999987776555555432   234466789999999999999999999975     999999999743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.91  E-value=1.9e-05  Score=69.26  Aligned_cols=79  Identities=23%  Similarity=0.411  Sum_probs=56.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC-------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP-------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P-------   53 (258)
                      |++.+  ...++.+.|+        +|++|.+||.+.+....+..++..                   ...++       
T Consensus       170 E~~~~--~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T cd07832         170 ELLYG--ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPL  247 (286)
T ss_pred             eeeec--cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchH
Confidence            55543  2345667773        888999999887766665555431                   01111       


Q ss_pred             ----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          54 ----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        54 ----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                          ...+.++.+||.+||..+|.+|+++     ++|+.||||.
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~h~~~~  286 (286)
T cd07832         248 EEIFPDASPEALDLLKGLLVYDPSKRLSA-----AEALRHPYFT  286 (286)
T ss_pred             HHhCCCccHHHHHHHHHHhccChhhCCCH-----HHHhhCcCcC
Confidence                2357889999999999999999985     9999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.90  E-value=1.4e-05  Score=68.86  Aligned_cols=78  Identities=18%  Similarity=0.323  Sum_probs=57.1

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      -|++.+   ..++..+|        |+|++|++||...+.......+...   .+..+..++.++.+||.+||..+|.+|
T Consensus       168 PE~~~~---~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  244 (256)
T cd06612         168 PEVIQE---IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEER  244 (256)
T ss_pred             HHHHhc---CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhC
Confidence            355554   34555666        3888999999876665544444332   223445678899999999999999999


Q ss_pred             cCCCCCCchhhccCCcc
Q psy1025          76 LGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF   92 (258)
                      ++.     .+|+.||||
T Consensus       245 ps~-----~~il~~~~~  256 (256)
T cd06612         245 PSA-----IQLLQHPFI  256 (256)
T ss_pred             cCH-----HHHhcCCCC
Confidence            985     999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=97.90  E-value=1.4e-05  Score=77.52  Aligned_cols=79  Identities=27%  Similarity=0.451  Sum_probs=65.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..|+..+|+        +|++|..||.+.+...++..++...+ .+|..+++++++||.+||..||.+|++.
T Consensus       215 E~~~~---~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~  291 (496)
T PTZ00283        215 EIWRR---KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSS  291 (496)
T ss_pred             HHhCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence            55553   346677773        88899999999999888888887654 4677899999999999999999999985


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           .+|++|||++.
T Consensus       292 -----~ell~~p~~~~  302 (496)
T PTZ00283        292 -----SKLLNMPICKL  302 (496)
T ss_pred             -----HHHHhCHHHHH
Confidence                 99999999875

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.90  E-value=1.5e-05  Score=72.55  Aligned_cols=37  Identities=27%  Similarity=0.441  Sum_probs=32.9

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      .++.++++||.+||.+||.+|++.     ++|++||||....
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~-----~ell~h~~~~~~~  308 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADL-----KMLMNHTFIKRSE  308 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCH-----HHHhcChHHhhcc
Confidence            468899999999999999999985     9999999997543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=97.88  E-value=3.1e-05  Score=71.08  Aligned_cols=66  Identities=20%  Similarity=0.212  Sum_probs=50.8

Q ss_pred             hhhcCCCCCCCCC---HHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          25 ILEAVKPPFTADN---RKKTIEKIL-RGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        25 ~ml~G~pPF~~~~---~~~l~~~Il-~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      +|++|+.||....   ...+...+. ......+..++.++++||.+||..||.+|+++     .+|++||||...
T Consensus       265 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~-----~ell~hp~~~~~  334 (353)
T PLN00034        265 EFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSA-----MQLLQHPFILRA  334 (353)
T ss_pred             HHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccccC
Confidence            8889999997432   233333332 33445567889999999999999999999985     999999999863

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.88  E-value=2.4e-05  Score=69.32  Aligned_cols=68  Identities=15%  Similarity=0.263  Sum_probs=55.4

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc------CCccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV------HPFFRSIN   96 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~------HpfF~~id   96 (258)
                      +|++ |.+||.+.+..+....+... ....|...+.+++++|.+||..||.+|++.     .++.+      ||||.+||
T Consensus       213 el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         213 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-----LEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHHHHHhhcCCCCCCCC
Confidence            6666 89999988888877777654 345567788999999999999999999985     45543      99999999


Q ss_pred             h
Q psy1025          97 W   97 (258)
Q Consensus        97 W   97 (258)
                      |
T Consensus       288 ~  288 (288)
T cd05061         288 F  288 (288)
T ss_pred             C
Confidence            9

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.88  E-value=1.6e-05  Score=76.59  Aligned_cols=80  Identities=18%  Similarity=0.330  Sum_probs=66.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+...++..++...+ .+|..++.++++||.+||.+||.+|+++
T Consensus       241 E~~~~---~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~  317 (478)
T PTZ00267        241 ELWER---KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTT  317 (478)
T ss_pred             hHhCC---CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCH
Confidence            55553   457777773        88899999999888888888887654 3567899999999999999999999985


Q ss_pred             CCCCchhhccCCccccC
Q psy1025          79 GPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~i   95 (258)
                           ++++.|+|++.+
T Consensus       318 -----~~~l~~~~~~~~  329 (478)
T PTZ00267        318 -----QQLLHTEFLKYV  329 (478)
T ss_pred             -----HHHHhCHHHHHH
Confidence                 999999998743

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=97.88  E-value=1.9e-05  Score=69.31  Aligned_cols=79  Identities=19%  Similarity=0.319  Sum_probs=54.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+.  ..++...|+        +|++|.+||.+.+..+....+...                   ....|      
T Consensus       169 PE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         169 PELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             HHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence            3555541  335566663        888999999876654433333210                   00111      


Q ss_pred             ------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 ------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 ------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                            ..++..+.+||.+||..+|.+|+++     .+|+.||||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~eil~~~~f  286 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSC-----EELLEHPYF  286 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCH-----HHHhcCCCC
Confidence                  2467889999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.87  E-value=2.6e-05  Score=68.57  Aligned_cols=71  Identities=17%  Similarity=0.182  Sum_probs=53.3

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-LIL-PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-~~~-P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .|+...|+        +|++|.+||...........+.... ... +..++.++.+||.+||..||.+|+++     .+|
T Consensus       202 ~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~el  276 (282)
T cd06636         202 TYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPST-----EQL  276 (282)
T ss_pred             CCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCH-----HHH
Confidence            45566663        8889999998766555444444332 222 23578999999999999999999985     999


Q ss_pred             ccCCcc
Q psy1025          87 RVHPFF   92 (258)
Q Consensus        87 k~HpfF   92 (258)
                      +.||||
T Consensus       277 l~~~~~  282 (282)
T cd06636         277 LKHPFI  282 (282)
T ss_pred             hcCCCC
Confidence            999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=97.87  E-value=2.7e-05  Score=67.12  Aligned_cols=63  Identities=29%  Similarity=0.465  Sum_probs=52.7

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+.......+....+ ..+..++.+++++|.+||..+|.+|++.     .+|++||||
T Consensus       194 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~-----~~ll~~~~~  257 (257)
T cd08225         194 ELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSI-----TSILKRPFL  257 (257)
T ss_pred             HHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCH-----HHHhhCCCC
Confidence            78899999998887777776665443 2345688999999999999999999985     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=97.86  E-value=2.6e-05  Score=67.11  Aligned_cols=63  Identities=30%  Similarity=0.472  Sum_probs=54.2

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+...+...+....+ .+|..++.++.+||.+||..+|.+|++.     ++|++|||+
T Consensus       202 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~il~~~~~  265 (265)
T cd08217         202 ELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPST-----EELLQLPLI  265 (265)
T ss_pred             HHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCH-----HHHhhCCCC
Confidence            88899999998887777777776554 4567789999999999999999999985     999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=97.86  E-value=2.8e-05  Score=66.98  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=62.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      -|++.+   ..++..+|.        +|++|..||...+.......+.... ..+|..++.++++||.+||..+|.+|++
T Consensus       170 PE~~~~---~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  246 (256)
T cd08220         170 PELCEG---KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQ  246 (256)
T ss_pred             chhccC---CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCC
Confidence            345543   345666773        7889999999888877777776543 3466778999999999999999999998


Q ss_pred             CCCCCchhhccCCcc
Q psy1025          78 SGPNDGEAVRVHPFF   92 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF   92 (258)
                      .     .+|.+||||
T Consensus       247 ~-----~~ll~~p~~  256 (256)
T cd08220         247 L-----SQIMAQPIC  256 (256)
T ss_pred             H-----HHHhhCCCC
Confidence            5     999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.86  E-value=2e-05  Score=70.01  Aligned_cols=70  Identities=24%  Similarity=0.349  Sum_probs=49.7

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHc--CC-----------------CCCCC-------------CCC
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILR--GK-----------------LILPP-------------YLT   57 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~--~~-----------------~~~P~-------------~~S   57 (258)
                      ++..+|.        +|++|.+||.+.+.......|..  +.                 +.+|.             ..+
T Consensus       201 ~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (310)
T cd07865         201 YGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKD  280 (310)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCC
Confidence            5566663        88899999988776554333322  00                 11111             135


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      ..+++||.+||..||.+|+++     +++++||||
T Consensus       281 ~~~~dli~~~l~~~P~~R~t~-----~e~l~h~~f  310 (310)
T cd07865         281 PHALDLIDKLLVLDPAKRIDA-----DTALNHDFF  310 (310)
T ss_pred             HHHHHHHHHHhcCChhhccCH-----HHHhcCCCC
Confidence            778999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.86  E-value=2.4e-05  Score=71.12  Aligned_cols=73  Identities=25%  Similarity=0.357  Sum_probs=52.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--------------------------CCCCC-----CCCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--------------------------KLILP-----PYLT   57 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--------------------------~~~~P-----~~~S   57 (258)
                      .++..+|+        +|++|++||.+.+....+..|...                          ....+     +.++
T Consensus       188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (334)
T cd07855         188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKAS  267 (334)
T ss_pred             ccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCC
Confidence            46666763        888999999877654433332210                          00111     2468


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      .++++||.+||+.+|.+|++.     .+++.||||..
T Consensus       268 ~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~~~~  299 (334)
T cd07855         268 PEALDLLSQMLQFDPEERITV-----EQALQHPFLAQ  299 (334)
T ss_pred             HHHHHHHHHHccCChhhCcCH-----HHHHhChhhhh
Confidence            899999999999999999985     89999999984

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=97.86  E-value=2.1e-05  Score=68.62  Aligned_cols=63  Identities=24%  Similarity=0.350  Sum_probs=48.3

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +|++|.+||...+.......+...  ...+|..++..+++||.. +..+|.+|++.     ++|++||||.
T Consensus       201 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~-~~~~p~~Rp~~-----~eil~hp~~~  265 (266)
T cd06651         201 EMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGC-IFVEARHRPSA-----EELLRHPFAQ  265 (266)
T ss_pred             HHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHHHH-hcCChhhCcCH-----HHHhcCcccc
Confidence            888999999876655544444332  355677789999999954 45699999974     9999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.86  E-value=1.4e-05  Score=71.53  Aligned_cols=83  Identities=13%  Similarity=0.196  Sum_probs=56.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHH-HHHHHcC-----------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKT-IEKILRG-----------------------------   48 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l-~~~Il~~-----------------------------   48 (258)
                      -|++.+. ..+|+...|+        +|++|.+||........ ...+...                             
T Consensus       177 PE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (314)
T cd08216         177 PEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNN  255 (314)
T ss_pred             HHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccch
Confidence            4555532 2467777773        88899999987554332 2222110                             


Q ss_pred             ----CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          49 ----KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        49 ----~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                          ....+..++.++.+||.+||..||.+|+++     +++++||||..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~p~~~~~  301 (314)
T cd08216         256 RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA-----SQLLNHSFFKQC  301 (314)
T ss_pred             hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH-----HHHhcCchHhhh
Confidence                001112346789999999999999999985     999999999855

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=97.85  E-value=2.7e-05  Score=67.55  Aligned_cols=63  Identities=16%  Similarity=0.327  Sum_probs=53.0

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+...+...+.... ..+|..++.++.+||.+||..+|.+|++.     ++|..||||
T Consensus       197 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~  260 (260)
T cd08222         197 EMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSA-----AEILRNPFI  260 (260)
T ss_pred             HHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCH-----HHHhhCCCC
Confidence            7789999998877777777766543 34566788999999999999999999985     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=97.83  E-value=2.6e-05  Score=70.76  Aligned_cols=80  Identities=23%  Similarity=0.270  Sum_probs=58.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----CCC----------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----LIL----------------------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----~~~----------------------   52 (258)
                      |++.+.  ..++...|+        +|++|.+||.+.+....+..|....     ..+                      
T Consensus       203 E~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (335)
T PTZ00024        203 ELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT  280 (335)
T ss_pred             hhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH
Confidence            555542  335666773        8889999999888776666554310     001                      


Q ss_pred             -CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          53 -PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        53 -P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                       ....+.++.+||.+||..+|.+|+++     ++|+.|+||++
T Consensus       281 ~~~~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~~~~~~~  318 (335)
T PTZ00024        281 IFPNASDDAIDLLQSLLKLNPLERISA-----KEALKHEYFKS  318 (335)
T ss_pred             hCcCCChHHHHHHHHHcCCCchhccCH-----HHHhcCcccCC
Confidence             12357889999999999999999985     99999999984

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=97.83  E-value=3e-05  Score=68.70  Aligned_cols=79  Identities=23%  Similarity=0.395  Sum_probs=56.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------------------   48 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------------------   48 (258)
                      -|++.+.  ..++...|+        +|++|.+||...+....+.++...                              
T Consensus       175 PE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd07843         175 PELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ  252 (293)
T ss_pred             chhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence            3555542  234555663        888999999987766655554321                              


Q ss_pred             -CCCCCCC-CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          49 -KLILPPY-LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        49 -~~~~P~~-~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                       .-.+|.. ++..+++||.+||..+|.+|+++     .+++.|+||
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~-----~ell~~~~f  293 (293)
T cd07843         253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISA-----EDALKHPYF  293 (293)
T ss_pred             hhccccccCCChHHHHHHHHHhccCccccCCH-----HHHhcCCCC
Confidence             0112333 68899999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=97.82  E-value=2.8e-05  Score=68.99  Aligned_cols=79  Identities=20%  Similarity=0.291  Sum_probs=56.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC--
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------LILP--   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~~~P--   53 (258)
                      -|++.+  ...++...|+        +|++|++||.+.+.......|....                       ...|  
T Consensus       195 PE~~~~--~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (311)
T cd07866         195 PELLLG--ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT  272 (311)
T ss_pred             hHHhhC--CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc
Confidence            465554  2346666673        8889999999887766555544210                       0011  


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                           ..++.++.+||.+||..||.+|++.     .+++.||||
T Consensus       273 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~-----~ell~~~~f  311 (311)
T cd07866         273 LEERFGKLGPEGLDLLSKLLSLDPYKRLTA-----SDALEHPYF  311 (311)
T ss_pred             HHHHcccCChhHHHHHHHHcccCcccCcCH-----HHHhcCCCC
Confidence                 1345788999999999999999985     999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.82  E-value=2.6e-05  Score=68.51  Aligned_cols=79  Identities=22%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCC-------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLIL-------   52 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~-------   52 (258)
                      -|++.+  ...++...|+        +|++|.+||...+..+....|...                   ....       
T Consensus       169 PE~~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07846         169 PELLVG--DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIE  246 (286)
T ss_pred             cHHhcc--ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcc
Confidence            455553  2345666773        888999999876654444433320                   0011       


Q ss_pred             -----CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          53 -----PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        53 -----P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                           ++.++..+++||.+||..+|.+|++.     .+|+.|+||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~  286 (286)
T cd07846         247 PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS-----SQLLHHEFF  286 (286)
T ss_pred             hHHHhCCCcCHHHHHHHHHHhcCCcccchhH-----HHHhcCCCC
Confidence                 12468889999999999999999985     899999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=97.81  E-value=2.2e-05  Score=68.14  Aligned_cols=64  Identities=27%  Similarity=0.470  Sum_probs=49.1

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKIL-----RGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il-----~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +|++|.+||...+.......+.     .....+|..++.+++++|.+||..+|.+|+++     .++++||||+
T Consensus       200 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~ll~~~~~~  268 (268)
T cd06630         200 EMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPS-----RELLKHPVFR  268 (268)
T ss_pred             HHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCH-----HHHhcCcccC
Confidence            8889999997654333233222     12345666789999999999999999999985     9999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=97.81  E-value=4.3e-05  Score=67.77  Aligned_cols=80  Identities=16%  Similarity=0.270  Sum_probs=60.9

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLIL---PPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~---P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      -|++.+   ..++...|        |+|++|..||...+.......+.......   +..++..+.+||.+||..+|.+|
T Consensus       184 PE~~~~---~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  260 (285)
T cd06648         184 PEVISR---LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR  260 (285)
T ss_pred             HHHhcC---CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhC
Confidence            355553   23555566        38889999999888877777776553222   33478899999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     .+|++|+||..
T Consensus       261 pt~-----~~il~~~~~~~  274 (285)
T cd06648         261 ATA-----AELLNHPFLAK  274 (285)
T ss_pred             cCH-----HHHccCccccc
Confidence            975     99999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=97.81  E-value=3.3e-05  Score=66.69  Aligned_cols=75  Identities=21%  Similarity=0.320  Sum_probs=58.4

Q ss_pred             CCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcC-CCCCCCC-CCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRG-KLILPPY-LTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~-~~~~P~~-~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      .++...|+        +|++|.+||...   ....+...+... ...++.. ++..+.++|.+||..+|.+|++.     
T Consensus       176 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~-----  250 (264)
T cd06623         176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSA-----  250 (264)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCH-----
Confidence            45555663        788999999776   455666666643 3445556 89999999999999999999985     


Q ss_pred             hhhccCCccccCC
Q psy1025          84 EAVRVHPFFRSIN   96 (258)
Q Consensus        84 ~eIk~HpfF~~id   96 (258)
                      .+|.+||||+.++
T Consensus       251 ~~ll~~~~~~~~~  263 (264)
T cd06623         251 AELLQHPFIKKAD  263 (264)
T ss_pred             HHHHhCHHHHhcc
Confidence            9999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=97.80  E-value=2.3e-05  Score=71.33  Aligned_cols=74  Identities=26%  Similarity=0.304  Sum_probs=53.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC----------------------------CC---CCCCCCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG----------------------------KL---ILPPYLT   57 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~----------------------------~~---~~P~~~S   57 (258)
                      .++..+|+        +|++|.+||.+.+....+..|...                            ..   ...+.++
T Consensus       185 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (337)
T cd07858         185 EYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHAN  264 (337)
T ss_pred             CCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCC
Confidence            46667773        788999999877654433333210                            00   0113578


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      .++++||++||..+|.+|++.     +++++||||..+
T Consensus       265 ~~~~~li~~~l~~~P~~Rps~-----~ell~h~~~~~~  297 (337)
T cd07858         265 PLAIDLLEKMLVFDPSKRITV-----EEALAHPYLASL  297 (337)
T ss_pred             HHHHHHHHHHhcCChhhccCH-----HHHHcCcchhhh
Confidence            999999999999999999985     999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.80  E-value=1.7e-05  Score=69.63  Aligned_cols=78  Identities=22%  Similarity=0.376  Sum_probs=55.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------CCCCC--------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------KLILP--------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------~~~~P--------   53 (258)
                      |++.+  ...++...|+        +|++|.+||.+.+..+.+..+...                  ...+|        
T Consensus       170 E~~~~--~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
T cd07836         170 DVLLG--SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQ  247 (284)
T ss_pred             HHhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHH
Confidence            55543  2345666663        788999999987776665554321                  00111        


Q ss_pred             ---CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 ---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 ---~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                         +.++.+++++|.+||+.||.+|++.     .+|++||||
T Consensus       248 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~~l~~~~f  284 (284)
T cd07836         248 QLFPHADPLGIDLLHRLLQLNPELRISA-----HDALQHPWF  284 (284)
T ss_pred             HHhhhcCcHHHHHHHHHhcCCcccCCCH-----HHHhcCCCC
Confidence               2357889999999999999999975     999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=97.80  E-value=3.6e-05  Score=67.85  Aligned_cols=73  Identities=18%  Similarity=0.285  Sum_probs=56.4

Q ss_pred             CCCceeh--------HhhhcCCCCCCCCCHHHHHHH---HHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAER--------NILEAVKPPFTADNRKKTIEK---ILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~---Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .++..+|        |+|++|..||...+....+..   |... ...+|..++.++++||.+||..+|.+|++.     +
T Consensus       183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~  257 (286)
T cd06622         183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTY-----A  257 (286)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCH-----H
Confidence            3466666        388899999987665554443   3333 345667799999999999999999999985     9


Q ss_pred             hhccCCcccc
Q psy1025          85 AVRVHPFFRS   94 (258)
Q Consensus        85 eIk~HpfF~~   94 (258)
                      +|+.||||..
T Consensus       258 ~l~~~~~~~~  267 (286)
T cd06622         258 QLLEHPWLVK  267 (286)
T ss_pred             HHhcChhhhh
Confidence            9999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0663|consensus

Probab=97.79  E-value=3.7e-05  Score=70.57  Aligned_cols=84  Identities=23%  Similarity=0.353  Sum_probs=66.8

Q ss_pred             cccccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCCC---
Q psy1025           5 RKASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILPP---   54 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P~---   54 (258)
                      |--|++.|  ...|+++||.        +||+++|-|.+.......++|...                   .+.+|.   
T Consensus       244 RaPELLLG--~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~py  321 (419)
T KOG0663|consen  244 RAPELLLG--AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPY  321 (419)
T ss_pred             cCHHHhcC--CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCc
Confidence            34588898  5789999994        899999999998887777766531                   122221   


Q ss_pred             ---------C-CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          55 ---------Y-LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        55 ---------~-~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                               . +|..+.+|+.+||..||.+|+++     ++-++|.||...
T Consensus       322 n~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA-----~~~L~h~~F~e~  367 (419)
T KOG0663|consen  322 NNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA-----EDGLKHEYFRET  367 (419)
T ss_pred             hhhhhhccccccchhHHHHHHHHhccCccccccH-----HHhhcccccccC
Confidence                     1 56999999999999999999986     999999999853

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=97.79  E-value=3.7e-05  Score=66.65  Aligned_cols=80  Identities=15%  Similarity=0.270  Sum_probs=58.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCC-----CHHHHHHHHHcC-CCCCCCC-CCHHHHHHHHHHhhcc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTAD-----NRKKTIEKILRG-KLILPPY-LTPDARELIRKLLKRQ   71 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~-----~~~~l~~~Il~~-~~~~P~~-~S~ea~dLI~~LL~kd   71 (258)
                      -|++.+   ..++..+|+        +|++|..||...     ........++.. .+..|.. ++.++++||.+||..+
T Consensus       168 PE~~~~---~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         168 PERIQG---NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             HHHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence            355554   356666673        788999999754     333445555443 3344554 8999999999999999


Q ss_pred             cccccCCCCCCchhhccCCcccc
Q psy1025          72 VAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |.+|++.     .+|+.||||..
T Consensus       245 p~~Rpt~-----~~ll~~~~~~~  262 (265)
T cd06605         245 PRERPSY-----KELLEHPFIKK  262 (265)
T ss_pred             chhCcCH-----HHHhhCchhhc
Confidence            9999985     99999999963

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0201|consensus

Probab=97.79  E-value=6.2e-06  Score=77.60  Aligned_cols=79  Identities=14%  Similarity=0.228  Sum_probs=62.7

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |||++   +||...+| |       +|..|.||+..-.+......|-+. ++.+-..+|+.+++|+..||.+||..|+++
T Consensus       181 EVI~~---~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA  257 (467)
T KOG0201|consen  181 EVIKQ---SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSA  257 (467)
T ss_pred             hhhcc---ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCH
Confidence            88984   78999888 3       999999999876664444444332 233334789999999999999999999985


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           .++++|+|.+.
T Consensus       258 -----~~LLKh~FIk~  268 (467)
T KOG0201|consen  258 -----KELLKHKFIKR  268 (467)
T ss_pred             -----HHHhhhHHHHh
Confidence                 99999999985

>KOG0600|consensus

Probab=97.78  E-value=3.6e-05  Score=73.76  Aligned_cols=82  Identities=20%  Similarity=0.206  Sum_probs=67.3

Q ss_pred             ccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC---------C-CCCC--------------
Q psy1025           6 KASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG---------K-LILP--------------   53 (258)
Q Consensus         6 ~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~---------~-~~~P--------------   53 (258)
                      -=|+|.|  .+.|+.+|| |       ||+.|+|.|.+.+..+....|.+.         . ..+|              
T Consensus       287 pPELLLG--~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~  364 (560)
T KOG0600|consen  287 PPELLLG--ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRR  364 (560)
T ss_pred             ChHHhcC--CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccch
Confidence            3589998  589999999 4       899999999999998888877641         1 1122              


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                           ..++..+.+||..||..||.+|.++     .+.+.|.||..
T Consensus       365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA-----~~aL~seyF~t  405 (560)
T KOG0600|consen  365 LRETFKDFPASALDLLEKLLSLDPDKRGTA-----SSALQSEYFTT  405 (560)
T ss_pred             HHHHhccCCHHHHHHHHHHhccCccccccH-----HHHhcCccccc
Confidence                 1478999999999999999999985     99999999953

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=97.77  E-value=6.1e-05  Score=64.43  Aligned_cols=63  Identities=27%  Similarity=0.462  Sum_probs=53.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+...+...+.... ..+|..++.++.++|.+||..+|.+|+++     .+++.||||
T Consensus       195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~  258 (258)
T cd08215         195 ELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSI-----AQILQSPFI  258 (258)
T ss_pred             HHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCCCC
Confidence            7789999999888887777776654 34566789999999999999999999985     999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0611|consensus

Probab=97.77  E-value=3.7e-05  Score=72.27  Aligned_cols=81  Identities=26%  Similarity=0.337  Sum_probs=66.3

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -|||.|..|+|-  .||        |.++.|..||.+.+...++..|.++.+.-|..-| +|..||+.||.++|.+|.+.
T Consensus       221 PEIvNG~PY~GP--EVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PS-dA~gLIRwmLmVNP~RRATi  297 (668)
T KOG0611|consen  221 PEIVNGTPYKGP--EVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPS-DASGLIRWMLMVNPERRATI  297 (668)
T ss_pred             ccccCCCCCCCC--ccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCc-hHHHHHHHHHhcCcccchhH
Confidence            489998555433  344        3777899999999999999999999888776554 68899999999999999984


Q ss_pred             CCCCchhhccCCccccCChh
Q psy1025          79 GPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~   98 (258)
                           ++|..|=|.   ||.
T Consensus       298 -----eDiAsHWWv---Nwg  309 (668)
T KOG0611|consen  298 -----EDIASHWWV---NWG  309 (668)
T ss_pred             -----HHHhhhhee---ecc
Confidence                 999999775   554

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=97.76  E-value=3.3e-05  Score=70.20  Aligned_cols=82  Identities=23%  Similarity=0.315  Sum_probs=56.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc---------------CC-----------CCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR---------------GK-----------LIL   52 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~---------------~~-----------~~~   52 (258)
                      -|++.+  ...++..+|+        +|++|++||.+.+.......+..               ..           ...
T Consensus       178 PE~~~~--~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (336)
T cd07849         178 PEIMLN--SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKV  255 (336)
T ss_pred             hHHhhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcc
Confidence            455543  2456777773        88899999987665443322211               00           000


Q ss_pred             -----CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          53 -----PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        53 -----P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                           .+.++.++.+||.+||..+|.+|++.     .+++.||||...
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-----~e~l~hp~~~~~  298 (336)
T cd07849         256 PWNKLFPNADPKALDLLDKMLTFNPHKRITV-----EEALAHPYLEQY  298 (336)
T ss_pred             cHHHHhcccCcHHHHHHHHHcCCChhhCcCH-----HHHhcCcccccc
Confidence                 12467889999999999999999985     999999999843

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.76  E-value=1.9e-05  Score=70.71  Aligned_cols=32  Identities=28%  Similarity=0.421  Sum_probs=29.1

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .+..+.+||.+||..||.+|+++     +++++||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~-----~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITS-----EQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCH-----HHHhcCCCC
Confidence            45678899999999999999985     999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=97.75  E-value=5.9e-05  Score=64.91  Aligned_cols=78  Identities=21%  Similarity=0.271  Sum_probs=61.0

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      -|++.+   ..++..+|.        +|++|..||...+.......+..... .++..++.+++++|.+||..+|.+|++
T Consensus       170 PE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  246 (256)
T cd08529         170 PELCED---KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPD  246 (256)
T ss_pred             HHHhcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcC
Confidence            355553   345556663        88899999998888777777776543 345578899999999999999999998


Q ss_pred             CCCCCchhhccCCcc
Q psy1025          78 SGPNDGEAVRVHPFF   92 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF   92 (258)
                      +     .+|..|||.
T Consensus       247 ~-----~~ll~~~~~  256 (256)
T cd08529         247 T-----FQLLRNPSL  256 (256)
T ss_pred             H-----HHHhhCCCC
Confidence            5     999999984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0582|consensus

Probab=97.75  E-value=3.4e-05  Score=72.99  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=63.8

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcCCCC------CCC----CCCHHHHHHHHHHhh
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRGKLI------LPP----YLTPDARELIRKLLK   69 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~~~~------~P~----~~S~ea~dLI~~LL~   69 (258)
                      ||++-+ -.||+..+| |       ||..|..||..-.+-++.-.-++..+.      ++.    .++...+.+|..||.
T Consensus       200 Evl~q~-~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~  278 (516)
T KOG0582|consen  200 EVLMQQ-LHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV  278 (516)
T ss_pred             HHhhhc-ccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence            664422 468888888 3       888999999887766655444444443      222    378899999999999


Q ss_pred             cccccccCCCCCCchhhccCCccccCChh
Q psy1025          70 RQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        70 kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +||.+|.++     .++++|+||+...-.
T Consensus       279 kDP~kRptA-----skLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  279 KDPSKRPTA-----SKLLKHAFFKKAKSK  302 (516)
T ss_pred             cCcccCCCH-----HHHhccHHHhhccch
Confidence            999999986     999999999865433

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=97.75  E-value=3.5e-05  Score=67.47  Aligned_cols=76  Identities=14%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             CCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCC-CCCCC-CCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGK-LILPP-YLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|        |+|++|.+||.+.+.......+.... ..++. .++.++.++|.+||..||.+|++.     .+
T Consensus       177 ~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~  251 (277)
T cd06917         177 KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSA-----EE  251 (277)
T ss_pred             CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCH-----HH
Confidence            34555566        38889999998876655554443332 22333 378899999999999999999985     99


Q ss_pred             hccCCccccCC
Q psy1025          86 VRVHPFFRSIN   96 (258)
Q Consensus        86 Ik~HpfF~~id   96 (258)
                      |+.|+||+...
T Consensus       252 il~~~~~~~~~  262 (277)
T cd06917         252 LLKSKWIKAHS  262 (277)
T ss_pred             HhhChHhhccc
Confidence            99999997543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0658|consensus

Probab=97.75  E-value=3.9e-05  Score=70.73  Aligned_cols=81  Identities=27%  Similarity=0.416  Sum_probs=64.1

Q ss_pred             cccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHc------------CC-----CCCC--------
Q psy1025           7 ASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILR------------GK-----LILP--------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~------------~~-----~~~P--------   53 (258)
                      =|.|.|  .+.|+.++| |       ||+-|.|-|.|++.......|.+            ..     ..+|        
T Consensus       194 PELifg--a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~  271 (364)
T KOG0658|consen  194 PELIFG--ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH  271 (364)
T ss_pred             HHHHcC--ccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce
Confidence            377887  689999999 5       99999999999887665544432            11     2223        


Q ss_pred             ----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 ----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 ----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                          ..+++++.+|+.++|.-+|.+|+++     .+++.||||..
T Consensus       272 ~~~~~~~~~d~~dll~~~L~Y~P~~R~~~-----~~~l~h~fFde  311 (364)
T KOG0658|consen  272 KVFFKRLPPDALDLLSKLLQYSPSKRLSA-----LEALAHPFFDE  311 (364)
T ss_pred             eecccCCCHHHHHHHHHHhccChhhcCCH-----HHHhcchhhHH
Confidence                2478999999999999999999985     89999999964

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=97.75  E-value=4.5e-05  Score=68.08  Aligned_cols=65  Identities=20%  Similarity=0.339  Sum_probs=51.0

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||...+.......+...   .+..|..++..+++||.+||..+|.+|+++     .+|+.|+||.-
T Consensus       208 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~eil~~~~~~~  275 (296)
T cd06654         208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA-----KELLQHQFLKI  275 (296)
T ss_pred             HHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCH-----HHHhhChhhhc
Confidence            888999999887765443333322   223456788999999999999999999975     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=97.74  E-value=2.4e-05  Score=71.66  Aligned_cols=81  Identities=20%  Similarity=0.226  Sum_probs=56.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------CCCC--
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------LILP--   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~~~P--   53 (258)
                      -|++.+  ...++..+|+        +|++|++||.+.+....+..|+...                       ...|  
T Consensus       186 PE~~~~--~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (345)
T cd07877         186 PEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  263 (345)
T ss_pred             HHHHhC--ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCc
Confidence            355543  2456666773        7889999998776655444433211                       0111  


Q ss_pred             ------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          54 ------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        54 ------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                            ...+.++++||.+||..||.+|++.     .+++.||||..
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~f~~  305 (345)
T cd07877         264 NFANVFIGANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQ  305 (345)
T ss_pred             chhhhcCCCCHHHHHHHHHHcCCChhhcCCH-----HHHhcChhhhh
Confidence                  1357889999999999999999985     99999999984

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.74  E-value=5.2e-05  Score=66.20  Aligned_cols=71  Identities=28%  Similarity=0.462  Sum_probs=52.4

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------CCCCC-----------CCCCHH
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------KLILP-----------PYLTPD   59 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------~~~~P-----------~~~S~e   59 (258)
                      .++...|.        +|++|.+||.+.+....+.+|...                  ...+|           +.++.+
T Consensus       175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd07829         175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPE  254 (282)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHH
Confidence            45666673        888999999888766655544320                  11111           124788


Q ss_pred             HHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          60 ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        60 a~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +.++|++||..||.+|++.     ++|..||||
T Consensus       255 ~~~~i~~~l~~~P~~Rp~~-----~~~l~~p~~  282 (282)
T cd07829         255 GIDLLSKMLQYNPAKRISA-----KEALKHPYF  282 (282)
T ss_pred             HHHHHHHhhccCcccCCCH-----HHHhhCcCC
Confidence            9999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=4.4e-05  Score=65.97  Aligned_cols=80  Identities=15%  Similarity=0.218  Sum_probs=57.7

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhcccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLI-----LPPYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~-----~P~~~S~ea~dLI~~LL~kdP~   73 (258)
                      -|++.+.....++..+|        |+|++|.+||...+.......+....+.     .+..++.++++||.+||..+|.
T Consensus       170 Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  249 (262)
T cd06613         170 PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPK  249 (262)
T ss_pred             chhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChh
Confidence            46665432224555666        3888999999887766655555444222     2334678899999999999999


Q ss_pred             cccCCCCCCchhhccCCc
Q psy1025          74 QRLGSGPNDGEAVRVHPF   91 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~Hpf   91 (258)
                      .|++.     .+|+.|+|
T Consensus       250 ~Rpt~-----~~il~~~~  262 (262)
T cd06613         250 KRPTA-----TKLLQHPF  262 (262)
T ss_pred             hCCCH-----HHHhcCCC
Confidence            99985     99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.74  E-value=5e-05  Score=65.86  Aligned_cols=63  Identities=27%  Similarity=0.334  Sum_probs=49.8

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|.+||...+.......+....   +..+..++.++++||.+||..||.+|++.     ++|++|||+
T Consensus       210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-----~~ll~~~~~  275 (275)
T cd06608         210 ELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFM-----EELLEHPFI  275 (275)
T ss_pred             HHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCH-----HHHhcCCCC
Confidence            7889999998766656555665542   22233478899999999999999999985     999999995

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.73  E-value=4.5e-05  Score=69.93  Aligned_cols=79  Identities=15%  Similarity=0.277  Sum_probs=55.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------------   49 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------------   49 (258)
                      -|++.+   .+++..+|+        +|++|+.||.+.+....+.+|+..-                             
T Consensus       186 PE~~~~---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T cd07850         186 PEVILG---MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYS  262 (353)
T ss_pred             HHHHhC---CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcc
Confidence            355554   456667773        7889999998877655554443210                             


Q ss_pred             -------CCCC-------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          50 -------LILP-------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        50 -------~~~P-------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                             ..+|       ...+.++++||.+||..||.+|++.     .+|+.||||.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~eiL~~~~~~  315 (353)
T cd07850         263 FEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISV-----DDALQHPYIN  315 (353)
T ss_pred             hhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCH-----HHHhcChhHh
Confidence                   0011       1235678999999999999999985     9999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.73  E-value=4.3e-05  Score=66.69  Aligned_cols=71  Identities=15%  Similarity=0.298  Sum_probs=52.9

Q ss_pred             CCCceeh--------HhhhcCCCCCCCCCH-H-HHHHH-HHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAER--------NILEAVKPPFTADNR-K-KTIEK-ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD--------~~ml~G~pPF~~~~~-~-~l~~~-Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      +++..+|        |+|++|.+||..... . ..+.. +......+|..++.++++||.+||..+|.+|+++     .+
T Consensus       187 ~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~  261 (268)
T cd06624         187 GYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASA-----HD  261 (268)
T ss_pred             cCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCH-----HH
Confidence            4666666        388899999975332 2 22222 2233456777899999999999999999999985     99


Q ss_pred             hccCCcc
Q psy1025          86 VRVHPFF   92 (258)
Q Consensus        86 Ik~HpfF   92 (258)
                      |..||||
T Consensus       262 ll~~~~~  268 (268)
T cd06624         262 LLQDPFL  268 (268)
T ss_pred             HHhCCCC
Confidence            9999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=97.73  E-value=3e-05  Score=68.19  Aligned_cols=68  Identities=16%  Similarity=0.150  Sum_probs=54.2

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +|++|.+||...+.......+... ...++..++.++.+||.+||..+|.+|++.     ++|+.|+||....-
T Consensus       193 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~  261 (277)
T cd06640         193 ELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTA-----KELLKHKFIVKNAK  261 (277)
T ss_pred             HHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCH-----HHHHhChHhhhcch
Confidence            888999999887776666655433 234455678899999999999999999975     99999999975543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=97.73  E-value=7e-05  Score=64.76  Aligned_cols=80  Identities=20%  Similarity=0.378  Sum_probs=55.8

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCC-CHHHHHHHHHcC-CCCCCCC--CCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTAD-NRKKTIEKILRG-KLILPPY--LTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~-~~~~l~~~Il~~-~~~~P~~--~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+.....++..+|        |+|++|..||... +.......+... ...+|..  ++..+.+||.+||..+|.+|
T Consensus       173 E~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  252 (264)
T cd06626         173 EVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKR  252 (264)
T ss_pred             hhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccC
Confidence            4454322123666666        3888999999764 333333334332 3455654  48999999999999999999


Q ss_pred             cCCCCCCchhhccCCcc
Q psy1025          76 LGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF   92 (258)
                      ++.     .+|+.|||+
T Consensus       253 ~~~-----~~i~~~~~~  264 (264)
T cd06626         253 PTA-----SELLQHPFV  264 (264)
T ss_pred             CCH-----HHHhcCCCC
Confidence            985     999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=97.72  E-value=7.9e-05  Score=63.81  Aligned_cols=71  Identities=17%  Similarity=0.321  Sum_probs=55.8

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKIL-RGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il-~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      .++...|+        +|++|.+||...+.......+. .....+|..++.+++++|.+||..+|.+|++.     .+++
T Consensus       175 ~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~~l  249 (254)
T cd06627         175 GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTA-----KQLL  249 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCH-----HHHh
Confidence            35566663        8889999998766555444443 34455677889999999999999999999975     9999


Q ss_pred             cCCcc
Q psy1025          88 VHPFF   92 (258)
Q Consensus        88 ~HpfF   92 (258)
                      .|+||
T Consensus       250 ~~~~~  254 (254)
T cd06627         250 KHPWI  254 (254)
T ss_pred             cCCCC
Confidence            99997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=97.72  E-value=4.7e-05  Score=67.91  Aligned_cols=73  Identities=15%  Similarity=0.252  Sum_probs=56.0

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++...|.        +|++|..||...+....+..+...   .+..+..++..+++||.+||..||.+|+++     ++
T Consensus       194 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~  268 (292)
T cd06658         194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATA-----QE  268 (292)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCH-----HH
Confidence            45556663        888999999987776665555432   222233578999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |++|+||..
T Consensus       269 il~~~~~~~  277 (292)
T cd06658         269 LLQHPFLKL  277 (292)
T ss_pred             HhhChhhhc
Confidence            999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=97.72  E-value=5.7e-05  Score=66.65  Aligned_cols=70  Identities=17%  Similarity=0.338  Sum_probs=55.6

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-C--CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-I--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +|++|.+||...+.......+..... .  .+..++.++++||.+||..+|.+|++.     .+|+.|+||....|..
T Consensus       208 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~~~~~~  280 (286)
T cd06614         208 EMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSA-----EELLQHPFLKKACPKE  280 (286)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCH-----HHHhhChHhhccCchH
Confidence            88899999998777666665554322 2  223478999999999999999999985     9999999999877753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=97.72  E-value=6.6e-05  Score=65.52  Aligned_cols=80  Identities=15%  Similarity=0.250  Sum_probs=56.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC----CCCHHHHHHHHHHhhccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP----YLTPDARELIRKLLKRQV   72 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~----~~S~ea~dLI~~LL~kdP   72 (258)
                      -|++.+.. .+++...|+        +|++|..||...+.......+...  ...+|.    .++.++++||.+||..+|
T Consensus       179 PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  257 (272)
T cd06629         179 PEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINP  257 (272)
T ss_pred             HHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCCh
Confidence            35555421 246666773        888999999765554444333322  233333    468999999999999999


Q ss_pred             ccccCCCCCCchhhccCCcc
Q psy1025          73 AQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        73 ~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .+|++.     ++|++||||
T Consensus       258 ~~Rps~-----~~il~~~~~  272 (272)
T cd06629         258 DNRPTA-----RELLQHPFI  272 (272)
T ss_pred             hhCCCH-----HHHhhCCCC
Confidence            999975     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=97.71  E-value=6.1e-05  Score=65.59  Aligned_cols=71  Identities=14%  Similarity=0.223  Sum_probs=50.9

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P-----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      ..++.++|+        +|++|.+||...........+....+..+     ..++..+++||.+||..+|.+|++.    
T Consensus       184 ~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~----  259 (267)
T cd06645         184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTA----  259 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCH----
Confidence            346666773        88899999976554443333333322222     1467899999999999999999974    


Q ss_pred             chhhccCCc
Q psy1025          83 GEAVRVHPF   91 (258)
Q Consensus        83 ~~eIk~Hpf   91 (258)
                       ++|+.|||
T Consensus       260 -~~ll~~~~  267 (267)
T cd06645         260 -EKLLQHPF  267 (267)
T ss_pred             -HHHhcCCC
Confidence             99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.70  E-value=5.6e-05  Score=66.21  Aligned_cols=78  Identities=18%  Similarity=0.339  Sum_probs=56.7

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----CC-----------CC---------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----LI-----------LP---------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----~~-----------~P---------   53 (258)
                      -|++.+   ..++...|+        +|++|.+||.+.+..+.+.+|...-     ..           ++         
T Consensus       175 PE~~~~---~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T cd07838         175 PEVLLQ---SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS  251 (287)
T ss_pred             hHHhcc---CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhh
Confidence            455554   335555663        8889999999888877777665310     00           11         


Q ss_pred             --CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 --PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 --~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                        ..++..+.+||.+||..||.+|++.     ++|+.||||
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~il~~~~~  287 (287)
T cd07838         252 FVPEICEEGLDLLKKMLTFNPHKRISA-----FEALQHPYF  287 (287)
T ss_pred             hhhhhhHHHHHHHHHHhccCCccCCCH-----HHHhcCcCC
Confidence              1356788999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=97.68  E-value=5.3e-05  Score=66.50  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=55.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------C----------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------K----------   49 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~----------   49 (258)
                      -|++.+  ...++...|.        +|++|.+||.+.+.......+...                   .          
T Consensus       170 PE~~~~--~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         170 PELLVG--DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             CchhcC--CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            356654  2256666773        788999999876554433322110                   0          


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          50 ---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        50 ---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                         ..+|..++.++++||++||..+|.+|++.     ++|++|+||
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~f  288 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTC-----DELLQHPYF  288 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccH-----HHHhcCCCC
Confidence               01334468999999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.67  E-value=5.1e-05  Score=66.30  Aligned_cols=79  Identities=24%  Similarity=0.454  Sum_probs=56.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++...|.        +|++|.+||.+.+..+.+..+...                   ...+|      
T Consensus       167 PE~~~~--~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd05118         167 PELLLG--DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP  244 (283)
T ss_pred             cHHHhc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccC
Confidence            355554  2356666773        788999999887765555444321                   00111      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                           ..++.++++||.+||..||.+|+..     .+|..||||
T Consensus       245 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-----~~ll~~~~~  283 (283)
T cd05118         245 LPKLFPNASPQALDLLSQMLHYDPHKRITA-----EQALAHPYF  283 (283)
T ss_pred             HHHhhhhhCHHHHHHHHHHhccCcccCcCH-----HHHhhCCCC
Confidence                 2367899999999999999999985     999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=97.67  E-value=4.2e-05  Score=66.62  Aligned_cols=80  Identities=11%  Similarity=0.168  Sum_probs=54.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC-----CCCCCHHHHHHHHHHhhcccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL-----PPYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~-----P~~~S~ea~dLI~~LL~kdP~   73 (258)
                      -|++.+.....++..+|+        +|++|.+||...+.......+....+..     +..++.++++||++||..+|.
T Consensus       175 PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  254 (267)
T cd06646         175 PEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPK  254 (267)
T ss_pred             HhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChh
Confidence            355543223456667773        8889999997655444333333332222     234789999999999999999


Q ss_pred             cccCCCCCCchhhccCCc
Q psy1025          74 QRLGSGPNDGEAVRVHPF   91 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~Hpf   91 (258)
                      +|++.     ++|++|+|
T Consensus       255 ~Rp~~-----~~il~~l~  267 (267)
T cd06646         255 KRPTA-----ERLLTHLF  267 (267)
T ss_pred             hCcCH-----HHHhcCCC
Confidence            99985     99999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.66  E-value=6.1e-05  Score=67.64  Aligned_cols=34  Identities=21%  Similarity=0.498  Sum_probs=31.5

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ++.++++||.+||..+|.+|++.     .+|+.||||.+
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~  292 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADL-----KELTKHPFIKR  292 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhhh
Confidence            67899999999999999999985     99999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0579|consensus

Probab=97.66  E-value=6.2e-05  Score=74.19  Aligned_cols=71  Identities=15%  Similarity=0.322  Sum_probs=61.6

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL---ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~---~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +|.-+.||-+..++-.++-+|....+   .-|..+|.+++|+|++||.+||..|..+     .+|++||||.+++-++.
T Consensus       227 EMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~a-----aqll~Hpfv~~~~SnK~  300 (1187)
T KOG0579|consen  227 EMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPA-----AQLLKHPFVQNAPSNKM  300 (1187)
T ss_pred             HHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCH-----HHHhhCcccccCCcchH
Confidence            78889999999999888888876543   3478899999999999999999999985     99999999998876543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=97.66  E-value=8.9e-05  Score=66.37  Aligned_cols=83  Identities=17%  Similarity=0.170  Sum_probs=59.2

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC-CCCCC-CCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG-KLILP-PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P-~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+.....++..+|        |+|++|.+||.+.+.......+... ...++ ..++.++++||.+||..+|.+|+
T Consensus       180 PE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  259 (307)
T cd06607         180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRP  259 (307)
T ss_pred             ceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCc
Confidence            35553221233555566        3889999999887776655555433 23332 35788999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      +.     .+|..|+||..
T Consensus       260 ~~-----~~il~~~~~~~  272 (307)
T cd06607         260 SS-----EELLKHRFVLR  272 (307)
T ss_pred             CH-----HHHhcChhhcc
Confidence            85     99999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.66  E-value=6.1e-05  Score=70.76  Aligned_cols=35  Identities=31%  Similarity=0.323  Sum_probs=31.2

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      ++.++.+||.+||..||.+|+++     +++++||||..+
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpta-----~elL~hp~f~~~  382 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPSA-----EALLDFAAFQDI  382 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCCH-----HHHhcChhhccC
Confidence            46689999999999999999985     999999999753

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.65  E-value=1.5e-05  Score=68.71  Aligned_cols=72  Identities=31%  Similarity=0.427  Sum_probs=52.1

Q ss_pred             CCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGP   80 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~   80 (258)
                      ..++...|+        +|++|..||...   +....+..++...+..+    .....++.+||.+||..||.+|++.  
T Consensus       174 ~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~--  251 (260)
T PF00069_consen  174 KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSA--  251 (260)
T ss_dssp             SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTH--
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCH--
Confidence            345666663        888999999887   33444444444332222    2234899999999999999999985  


Q ss_pred             CCchhhccCCcc
Q psy1025          81 NDGEAVRVHPFF   92 (258)
Q Consensus        81 ~g~~eIk~HpfF   92 (258)
                         .+|++||||
T Consensus       252 ---~~l~~~~~~  260 (260)
T PF00069_consen  252 ---EELLKHPWF  260 (260)
T ss_dssp             ---HHHHTSGGG
T ss_pred             ---HHHhcCCCC
Confidence               999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.64  E-value=5.5e-05  Score=67.03  Aligned_cols=80  Identities=19%  Similarity=0.232  Sum_probs=56.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------CCC----
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------LIL----   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~~~----   52 (258)
                      |++.+  ...++...|+        +|++|.+||.+.+....+.++...-                       ...    
T Consensus       172 E~~~~--~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (298)
T cd07841         172 ELLFG--ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQ  249 (298)
T ss_pred             HHHhC--CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhh
Confidence            55543  2345666673        8889999998877665555553210                       000    


Q ss_pred             -CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          53 -PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        53 -P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                       ....+.++.+||.+||..+|.+|++.     .+|+.|+||.+
T Consensus       250 ~~~~~~~~~~~li~~~l~~~P~~R~s~-----~e~l~~~~~~~  287 (298)
T cd07841         250 IFPAASDDALDLLQRLLTLNPNKRITA-----RQALEHPYFSN  287 (298)
T ss_pred             hcccccHHHHHHHHHHhcCCcccCcCH-----HHHhhCccccC
Confidence             12357889999999999999999985     99999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=97.63  E-value=0.00014  Score=65.46  Aligned_cols=67  Identities=22%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK-LIL-PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~-~~~-P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      +|++|.+||...+.......+.... ... ...++...++||.+||.++|.+|++.     .+++.||||...+
T Consensus       212 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~-----~~~l~~~~~~~~~  280 (313)
T cd06633         212 ELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPAS-----AELLRHDFVRRDR  280 (313)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccCCCc
Confidence            8889999998877666555554432 222 23577889999999999999999985     9999999998644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG4236|consensus

Probab=97.63  E-value=2.9e-05  Score=75.00  Aligned_cols=84  Identities=23%  Similarity=0.489  Sum_probs=69.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -||+++   +||+++.|.        +-|.|..||..+  .++-+.|.+..+-||+    .+|.+|.|||.+||++.-.+
T Consensus       735 PEVLrn---kGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~k  809 (888)
T KOG4236|consen  735 PEVLRN---KGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRK  809 (888)
T ss_pred             HHHHhh---ccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHH
Confidence            489995   799999994        556899999753  4566788888888875    59999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccC-Chhhh
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSI-NWSDV  100 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~i-dW~~l  100 (258)
                      |++     ++.-+.|||.++- -|-+|
T Consensus       810 Rys-----vdk~lsh~Wlq~yq~w~DL  831 (888)
T KOG4236|consen  810 RYS-----VDKSLSHPWLQDYQTWLDL  831 (888)
T ss_pred             hcc-----hHhhccchhhhcchHHHHH
Confidence            997     4899999999863 47665

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=97.63  E-value=0.00011  Score=66.86  Aligned_cols=82  Identities=28%  Similarity=0.324  Sum_probs=56.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---------------------------C-
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---------------------------L-   50 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---------------------------~-   50 (258)
                      -|++.+  ...++..+|.        +|++|++||.+.........+....                           . 
T Consensus       181 PE~~~~--~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd07852         181 PEILLG--STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRK  258 (337)
T ss_pred             ceeeec--cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccccc
Confidence            354443  2445666663        8889999998766554443332210                           0 


Q ss_pred             ---CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          51 ---ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        51 ---~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                         .....++.++.+||.+||..||.+|++.     .++++|+||..+
T Consensus       259 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~-----~~il~~~~~~~~  301 (337)
T cd07852         259 PLDELLPKASDDALDLLKKLLVFNPNKRLTA-----EEALEHPYVAQF  301 (337)
T ss_pred             chhhhccCCCHHHHHHHHHhccCCcccccCH-----HHHhhChhhhhh
Confidence               0012368899999999999999999985     999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.62  E-value=0.0001  Score=64.99  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=56.7

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCH-------HHHHHHHHcC-CCCCC-CCCCHHHHHHHHHHhh
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNR-------KKTIEKILRG-KLILP-PYLTPDARELIRKLLK   69 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~-------~~l~~~Il~~-~~~~P-~~~S~ea~dLI~~LL~   69 (258)
                      -|++.+   ..++..+|        |+|++|..||.....       ......+... ....+ ..++.++++||.+||.
T Consensus       162 PE~~~~---~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (279)
T cd06619         162 PERISG---EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMR  238 (279)
T ss_pred             ceeecC---CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhh
Confidence            466654   34666677        388899999964221       2223333322 22223 3578899999999999


Q ss_pred             cccccccCCCCCCchhhccCCccccCC
Q psy1025          70 RQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        70 kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      ++|.+|++.     ++|+.||||...+
T Consensus       239 ~~P~~Rp~~-----~eil~~~~~~~~~  260 (279)
T cd06619         239 KQPKERPAP-----ENLMDHPFIVQYN  260 (279)
T ss_pred             CChhhCCCH-----HHHhcCccccccc
Confidence            999999974     9999999998654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PHA02988 hypothetical protein; Provisional

Probab=97.62  E-value=8.1e-05  Score=66.27  Aligned_cols=74  Identities=14%  Similarity=0.123  Sum_probs=57.6

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+. ...|+..+|        |+|++|..||.+.+...++..+...  .+.+|...+.++++||.+||..||.+|++
T Consensus       190 E~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  268 (283)
T PHA02988        190 KMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPN  268 (283)
T ss_pred             HHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcC
Confidence            555431 245777777        3889999999998888888888654  45556678999999999999999999997


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      .     .+|.
T Consensus       269 ~-----~ell  273 (283)
T PHA02988        269 I-----KEIL  273 (283)
T ss_pred             H-----HHHH
Confidence            5     6664

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=97.62  E-value=0.00012  Score=63.12  Aligned_cols=63  Identities=22%  Similarity=0.337  Sum_probs=54.2

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLIL-PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~-P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+..+....|....+.. +..++.++.++|.+||..+|.+|++.     +++++|+|+
T Consensus       193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~-----~~ll~~~~l  256 (256)
T cd08221         193 ELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTA-----DEVLDQPLL  256 (256)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCH-----HHHhhCcCC
Confidence            8889999999988888888887765443 45688999999999999999999974     999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=97.61  E-value=0.00012  Score=62.86  Aligned_cols=70  Identities=26%  Similarity=0.315  Sum_probs=54.3

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILR--GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~--~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      ++...|.        +|++|.+||...........+..  ....+|..++.++++||.+||..+|.+|++.     .+|.
T Consensus       179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~l  253 (258)
T cd06632         179 YGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTA-----AELL  253 (258)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCH-----HHHh
Confidence            5666663        78899999987665454444443  2334567789999999999999999999974     9999


Q ss_pred             cCCcc
Q psy1025          88 VHPFF   92 (258)
Q Consensus        88 ~HpfF   92 (258)
                      .|||+
T Consensus       254 ~~~~~  258 (258)
T cd06632         254 EHPFV  258 (258)
T ss_pred             cCCCC
Confidence            99996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=97.61  E-value=9.6e-05  Score=65.50  Aligned_cols=71  Identities=21%  Similarity=0.237  Sum_probs=52.3

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CC--CC-------------------------CCCCCH
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KL--IL-------------------------PPYLTP   58 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~--~~-------------------------P~~~S~   58 (258)
                      .++...|+        +|++|++||...+.......|...   ..  .+                         ...++.
T Consensus       194 ~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (302)
T cd07864         194 RYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPT  273 (302)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCH
Confidence            45666663        788999999877766555444331   10  00                         123688


Q ss_pred             HHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          59 DARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        59 ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .+++||.+||..||.+|++.     ++|+.||||
T Consensus       274 ~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~  302 (302)
T cd07864         274 PALDLLDHMLTLDPSKRCTA-----EEALNSPWL  302 (302)
T ss_pred             HHHHHHHHHccCChhhCCCH-----HHHhcCCCC
Confidence            99999999999999999985     999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=97.59  E-value=0.0001  Score=67.08  Aligned_cols=80  Identities=18%  Similarity=0.239  Sum_probs=55.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc--------------------------CCCCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR--------------------------GKLIL   52 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~--------------------------~~~~~   52 (258)
                      -|++.+  ...++...|+        +|++|.+||...+....+..+..                          .....
T Consensus       174 PE~~~~--~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (328)
T cd07856         174 PEIMLT--WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPV  251 (328)
T ss_pred             ceeeec--cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCC
Confidence            345543  2456777773        78899999987665433322211                          00111


Q ss_pred             C-----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          53 P-----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        53 P-----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      |     ..++.+++++|.+||+.+|.+|++.     ++++.|+||.
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-----~ell~~~~~~  292 (328)
T cd07856         252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISA-----AEALAHPYLA  292 (328)
T ss_pred             cHHHHcCCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCCccc
Confidence            1     2467899999999999999999985     9999999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=97.58  E-value=0.00013  Score=63.51  Aligned_cols=78  Identities=17%  Similarity=0.351  Sum_probs=56.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++..+|+        +|++|.+||...+....+..+...  ....|..++..+.++|.+++. +|.+|+
T Consensus       178 PE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp  253 (265)
T cd06652         178 PEVISG---EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRP  253 (265)
T ss_pred             hhhhcC---CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCC
Confidence            355554   234555663        888999999876655555554433  234567789999999999985 899999


Q ss_pred             CCCCCCchhhccCCccc
Q psy1025          77 GSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~   93 (258)
                      +.     ++|+.|+|+.
T Consensus       254 ~~-----~~il~~~~~~  265 (265)
T cd06652         254 SA-----DELLRHTFVH  265 (265)
T ss_pred             CH-----HHHhcCcccC
Confidence            74     9999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=97.58  E-value=0.00012  Score=65.39  Aligned_cols=80  Identities=16%  Similarity=0.345  Sum_probs=59.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      -|++.+   ..++...|.        +|++|.+||...+.......+....   ...+..++.++.++|.+||..+|.+|
T Consensus       186 PE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~R  262 (297)
T cd06659         186 PEVISR---TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER  262 (297)
T ss_pred             HHHHcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccC
Confidence            355553   345566663        8889999998877766666655432   22334678899999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      ++.     ++|++|+||..
T Consensus       263 ps~-----~~ll~~~~~~~  276 (297)
T cd06659         263 ATA-----QELLDHPFLLQ  276 (297)
T ss_pred             cCH-----HHHhhChhhcc
Confidence            974     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.58  E-value=9e-05  Score=67.59  Aligned_cols=35  Identities=20%  Similarity=0.403  Sum_probs=31.8

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      .++.++++||.+||.+||.+|++.     ++|+.|+||+.
T Consensus       270 ~~~~~~~~li~~~L~~~P~~Rpt~-----~ell~h~~~~~  304 (333)
T cd06650         270 VFGAEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKR  304 (333)
T ss_pred             CcCHHHHHHHHHhccCCcccCcCH-----HHHhhCHHHhc
Confidence            367899999999999999999985     99999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=97.57  E-value=0.00014  Score=62.50  Aligned_cols=63  Identities=25%  Similarity=0.460  Sum_probs=52.7

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|++||...+...+...+....+ ..+..++.+++++|.+||..+|.+|++.     .+|++||+.
T Consensus       193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~l~~p~~  256 (256)
T cd08530         193 EMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNC-----DKILASPAV  256 (256)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCH-----HHHhcCCCC
Confidence            78899999998888777777766543 3455688999999999999999999985     999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=97.57  E-value=0.00014  Score=65.64  Aligned_cols=65  Identities=22%  Similarity=0.227  Sum_probs=52.5

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCC-CC-CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKL-IL-PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~-~~-P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||...+.......+..... .. +..++..+++||.+||..+|.+|++.     .+|++|+|+..
T Consensus       216 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~  282 (317)
T cd06635         216 ELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTS-----EELLKHMFVLR  282 (317)
T ss_pred             HHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCH-----HHHHhChhhhc
Confidence            88899999988777776666665432 22 23578899999999999999999985     99999999953

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=97.57  E-value=5e-05  Score=67.86  Aligned_cols=65  Identities=22%  Similarity=0.390  Sum_probs=49.8

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||...+.......+...   .+..|..++...++||.+||..+|.+|++.     ++|+.||||..
T Consensus       207 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~  274 (297)
T cd06656         207 EMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSA-----KELLQHPFLKL  274 (297)
T ss_pred             HHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCH-----HHHhcCchhcc
Confidence            888999999876654433323221   223456788999999999999999999975     99999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=97.55  E-value=6.5e-05  Score=66.96  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=54.4

Q ss_pred             CCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHc-CCCC--CCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAER--------NILEAVKPPFTADNRKKTIEKILR-GKLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~-~~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++...|        |+|++|.+||...+.......+.. ....  .+..++...++||.+||..+|.+|++.     ++
T Consensus       191 ~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-----~~  265 (293)
T cd06647         191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA-----KE  265 (293)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            3555566        388899999987765544333332 2222  234578899999999999999999974     99


Q ss_pred             hccCCccccC
Q psy1025          86 VRVHPFFRSI   95 (258)
Q Consensus        86 Ik~HpfF~~i   95 (258)
                      |..|+||...
T Consensus       266 il~h~~~~~~  275 (293)
T cd06647         266 LLQHPFLKIA  275 (293)
T ss_pred             HhcCHHHhcC
Confidence            9999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=97.55  E-value=6.2e-05  Score=66.08  Aligned_cols=69  Identities=14%  Similarity=0.147  Sum_probs=53.4

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +|++|.+||...........+... ...++..++.++.+||.+||..+|.+|++.     .+|.+|+||....+.
T Consensus       193 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~~  262 (277)
T cd06642         193 ELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTA-----KELLKHKFITRYTKK  262 (277)
T ss_pred             HHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCH-----HHHHHhHHHHHHhhh
Confidence            888999999876665555544433 233445678899999999999999999975     999999999865544

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=97.54  E-value=0.00015  Score=65.02  Aligned_cols=65  Identities=22%  Similarity=0.233  Sum_probs=50.8

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC-CCC-CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK-LIL-PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~-~~~-P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|..||...+.......+.... ... +..++..+++||.+||..+|.+|++.     ++|+.|+|+..
T Consensus       206 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-----~~ll~~~~~~~  272 (308)
T cd06634         206 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTS-----EVLLKHRFVLR  272 (308)
T ss_pred             HHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCH-----HHHhhCccccc
Confidence            8889999998766555545554432 222 23688899999999999999999985     99999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=97.54  E-value=0.00014  Score=64.93  Aligned_cols=65  Identities=25%  Similarity=0.386  Sum_probs=51.0

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||.+.+.......+...   .+.....++.++.++|.+||..+|.+|++.     .+|+.|+||..
T Consensus       208 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~-----~~ll~~~~~~~  275 (292)
T cd06657         208 EMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATA-----AELLKHPFLAK  275 (292)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCH-----HHHhcChHHhc
Confidence            888999999887776655554332   122234578899999999999999999985     89999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=97.54  E-value=0.00015  Score=61.85  Aligned_cols=63  Identities=25%  Similarity=0.442  Sum_probs=50.0

Q ss_pred             hhhcCCCCCCCCC-HHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADN-RKKTIEKILR--GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~-~~~l~~~Il~--~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||...+ .......+..  ....+|..++.+.++||.+||..+|.+|++.     .++..||||
T Consensus       195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~  260 (260)
T cd06606         195 EMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTA-----DELLQHPFL  260 (260)
T ss_pred             HHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCH-----HHHhhCCCC
Confidence            7889999998765 3333444442  3345677889999999999999999999975     999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=97.53  E-value=0.00016  Score=64.33  Aligned_cols=72  Identities=22%  Similarity=0.311  Sum_probs=53.3

Q ss_pred             CCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCC-CCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGK-LILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~-~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ++...|+        +|++|+.||..... .+....++... ..++.  .++.++++||.+||..||.+|++.     ++
T Consensus       195 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-----~~  269 (296)
T cd06618         195 YDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKY-----RE  269 (296)
T ss_pred             cccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCH-----HH
Confidence            5556673        88899999975322 34445555443 23333  478899999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |+.|+||..
T Consensus       270 il~~~~~~~  278 (296)
T cd06618         270 LLQHPFIRR  278 (296)
T ss_pred             HhcChhhhc
Confidence            999999973

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.53  E-value=0.0001  Score=65.64  Aligned_cols=33  Identities=30%  Similarity=0.536  Sum_probs=30.3

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      ..+.++.++|.+||..||.+|+++     .+|..||||
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~-----~eil~~~~f  316 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITA-----EEALEHPYF  316 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCH-----HHHhcCCCC
Confidence            467789999999999999999985     999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=97.52  E-value=0.00014  Score=63.89  Aligned_cols=65  Identities=17%  Similarity=0.212  Sum_probs=53.3

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||...+.......|.... ..++..++.++.++|.+||..+|.+|++.     .+|.+||||..
T Consensus       193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~~l~~~~~~~  258 (277)
T cd06641         193 ELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA-----KELLKHKFIVR  258 (277)
T ss_pred             HHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCH-----HHHHhCHHHhh
Confidence            8889999998877766666665443 33556788999999999999999999974     99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=97.52  E-value=0.00016  Score=65.66  Aligned_cols=80  Identities=28%  Similarity=0.340  Sum_probs=55.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC----------------------------CC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG----------------------------KL   50 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~----------------------------~~   50 (258)
                      -|++.+  ...++..+|+        +|++|.+||...+....+..++..                            ..
T Consensus       178 PE~~~~--~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (332)
T cd07857         178 PEIMLS--FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKK  255 (332)
T ss_pred             cHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCc
Confidence            454543  2456777774        778999999876654444332210                            01


Q ss_pred             CCC---CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          51 ILP---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        51 ~~P---~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      .++   ..++.++++||.+||..||.+|++.     .+++.||||.
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-----~~ll~~~~~~  296 (332)
T cd07857         256 PFESIFPNANPLALDLLEKLLAFDPTKRISV-----EEALEHPYLA  296 (332)
T ss_pred             chHhhCCCCCHHHHHHHHHHccCCcccCCCH-----HHHhcChhhh
Confidence            111   1357899999999999999999985     9999999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=97.51  E-value=0.00016  Score=62.47  Aligned_cols=73  Identities=26%  Similarity=0.365  Sum_probs=56.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~-~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..++..+|+        +|++|.+||...+.......+....+. .|..++..+++||.+||.+||.+|++.
T Consensus       170 E~~~~---~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  246 (255)
T cd08219         170 EIWEN---MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSA  246 (255)
T ss_pred             HHHcc---CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCH
Confidence            55553   346666673        888999999998888887777766543 567789999999999999999999975


Q ss_pred             CCCCchhhcc
Q psy1025          79 GPNDGEAVRV   88 (258)
Q Consensus        79 ~~~g~~eIk~   88 (258)
                           .+|..
T Consensus       247 -----~~il~  251 (255)
T cd08219         247 -----TTILS  251 (255)
T ss_pred             -----HHHhh
Confidence                 66653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=97.51  E-value=0.00014  Score=64.03  Aligned_cols=71  Identities=21%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .|+..+|+        +|++|.+||...+.......+...   ....|..++.++++||.+||..||.+|+++     .+
T Consensus       205 ~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e  279 (286)
T cd06638         205 TYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTV-----SD  279 (286)
T ss_pred             cccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCH-----HH
Confidence            46667773        888999999876654444443332   122355678899999999999999999985     99


Q ss_pred             hccCCcc
Q psy1025          86 VRVHPFF   92 (258)
Q Consensus        86 Ik~HpfF   92 (258)
                      |++|+||
T Consensus       280 ll~~~~~  286 (286)
T cd06638         280 LLQHVFI  286 (286)
T ss_pred             HhhcccC
Confidence            9999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=97.51  E-value=0.00013  Score=64.04  Aligned_cols=79  Identities=23%  Similarity=0.407  Sum_probs=54.5

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC------
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG-------------------KLILP------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P------   53 (258)
                      -|++.+  ...++...|        |+|++|.+||...+....+..+...                   ...+|      
T Consensus       167 PE~~~~--~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         167 PEILLR--STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             ceeeec--CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            455543  234566666        3888999999887665555443320                   00111      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                           ...+.++++||++||..+|.+|++.     ++|+.||||
T Consensus       245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~~~~~~  283 (283)
T cd07830         245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTA-----SQALQHPYF  283 (283)
T ss_pred             HHHHcccCCHHHHHHHHHhcccCcccCCCH-----HHHhhCCCC
Confidence                 1236789999999999999999985     999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=97.50  E-value=0.00014  Score=63.46  Aligned_cols=78  Identities=22%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----CCC----------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----LIL----------------------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----~~~----------------------   52 (258)
                      |++.+  ...++...|+        +|++|.+||...+.......+....     ..+                      
T Consensus       171 E~~~~--~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (287)
T cd07840         171 ELLLG--ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRL  248 (287)
T ss_pred             eeeEc--cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHH
Confidence            54543  2345666663        8889999999888766655554310     000                      


Q ss_pred             ----CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          53 ----PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        53 ----P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                          ...++.++.++|.+||..+|.+|++.     .++..|+||
T Consensus       249 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-----~~~l~~~~~  287 (287)
T cd07840         249 REFFKHLIDPSALDLLDKLLTLDPKKRISA-----DQALQHEYF  287 (287)
T ss_pred             HHHhcccCCHHHHHHHHHHcCCChhhCcCH-----HHHhhCcCC
Confidence                01138899999999999999999985     999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=97.50  E-value=0.00018  Score=63.50  Aligned_cols=79  Identities=19%  Similarity=0.242  Sum_probs=55.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-----------HHHHHHHcC-CCCCCCC-CCHHHHHHHH
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-----------KTIEKILRG-KLILPPY-LTPDARELIR   65 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-----------~l~~~Il~~-~~~~P~~-~S~ea~dLI~   65 (258)
                      -|++.+   ..++..+|.        +|++|.+||...+..           ..+..+... ...++.. ++.++.+||.
T Consensus       171 PE~~~~---~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  247 (284)
T cd06620         171 PERIQG---GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVD  247 (284)
T ss_pred             HHHHcc---CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHH
Confidence            355543   345566663        788999999865431           233344333 2333333 7889999999


Q ss_pred             HHhhcccccccCCCCCCchhhccCCccc
Q psy1025          66 KLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        66 ~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +||..||.+|++.     ++|.+|+||.
T Consensus       248 ~~l~~dp~~Rpt~-----~e~~~~~~~~  270 (284)
T cd06620         248 ACLLKDPTERPTP-----QQLCAMPPFI  270 (284)
T ss_pred             HHhcCCcccCcCH-----HHHhcCcccc
Confidence            9999999999985     9999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=97.49  E-value=0.00011  Score=76.47  Aligned_cols=84  Identities=15%  Similarity=0.137  Sum_probs=60.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP-PYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P-~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+. ...|+..+|+        +|++|.+||...+....+..++...+.+| ...+.++.+||..||..+|.+|+++
T Consensus       211 EvL~ge-~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa  289 (1021)
T PTZ00266        211 ELLLHE-TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSA  289 (1021)
T ss_pred             HHHhcc-CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCH
Confidence            555432 2346677773        88899999986554433333333333444 3578999999999999999999985


Q ss_pred             CCCCchhhccCCccccCCh
Q psy1025          79 GPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW   97 (258)
                           .+++.|+|+..+..
T Consensus       290 -----~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        290 -----LQCLGYQIIKNVGP  303 (1021)
T ss_pred             -----HHHhccHHHhhcCC
Confidence                 99999999987654

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=97.49  E-value=0.00018  Score=63.67  Aligned_cols=80  Identities=11%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCC-----CHHHHHHHHHcCC-CCCCC------CCCHHHHHHHHHH
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTAD-----NRKKTIEKILRGK-LILPP------YLTPDARELIRKL   67 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~-----~~~~l~~~Il~~~-~~~P~------~~S~ea~dLI~~L   67 (258)
                      |++.+   ..++..+|        |+|++|..||...     ...++...+.... ..++.      .++.++++||.+|
T Consensus       173 E~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  249 (287)
T cd06621         173 ERIQG---KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQC  249 (287)
T ss_pred             HHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHH
Confidence            45543   34555666        3888999999765     3344555555422 22221      3467899999999


Q ss_pred             hhcccccccCCCCCCchhhccCCccccC
Q psy1025          68 LKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        68 L~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      |..+|.+|++.     .+|+.|+||...
T Consensus       250 l~~~p~~Rpt~-----~eil~~~~~~~~  272 (287)
T cd06621         250 LEKDPTRRPTP-----WDMLEHPWIKAQ  272 (287)
T ss_pred             cCCCcccCCCH-----HHHHhCcccccc
Confidence            99999999985     999999999754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.48  E-value=0.00023  Score=59.87  Aligned_cols=63  Identities=41%  Similarity=0.664  Sum_probs=51.3

Q ss_pred             hhhcCCCCCCC-CCHHHHHHHHHcCCCCCCCC---CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTA-DNRKKTIEKILRGKLILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~-~~~~~l~~~Il~~~~~~P~~---~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|..||.. .+.......+.......+..   ++.+..++|.+||..+|.+|++.     .++.+||||
T Consensus       178 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~~~~~~~~  244 (244)
T smart00220      178 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTA-----EEALQHPFF  244 (244)
T ss_pred             HHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCH-----HHHhhCCCC
Confidence            77899999987 66666666666555544433   88999999999999999999975     999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.47  E-value=0.00011  Score=71.44  Aligned_cols=61  Identities=23%  Similarity=0.264  Sum_probs=44.9

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCC-------CCCCCcCcCCCCCCCCC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRK-------LEPPFKPSLTGEDDVSQ  121 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~-------~~pPf~P~~~~~~D~s~  121 (258)
                      ++.++.++|.+||..||.+|+++     .|++.||||...+++.+....       .-.|+.|.+..+.|+..
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rpsa-----~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPGA-----AELLALPLFSAEEEEEILFIHGLKSGAAHFKPIKPACRIESDTAA  493 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcCH-----HHHhhChhhhcCCchHHHHHHhhhccccccccCCchheecccccc
Confidence            55678889999999999999985     999999999988776553321       13466666665555443

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.46  E-value=5.6e-05  Score=61.91  Aligned_cols=78  Identities=12%  Similarity=0.118  Sum_probs=54.2

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCH-HHHHHHHHcCCCCC-------CCCCCH--HHHHHHHHHhh
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNR-KKTIEKILRGKLIL-------PPYLTP--DARELIRKLLK   69 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~-~~l~~~Il~~~~~~-------P~~~S~--ea~dLI~~LL~   69 (258)
                      |++.+   ..|+..+|        |+|++|.+||..... ...+..+.......       +..++.  ++++||.+||.
T Consensus        74 E~~~~---~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~  150 (176)
T smart00750       74 EVIQG---QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCAS  150 (176)
T ss_pred             HHhcC---CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHh
Confidence            67775   35666777        388999999976543 33344443322111       123444  69999999999


Q ss_pred             cccccccCCCCCCchhhccCCccc
Q psy1025          70 RQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        70 kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      .+|.+|++.     .+|+.|+|+.
T Consensus       151 ~~p~~Rp~~-----~~ll~~~~~~  169 (176)
T smart00750      151 RLPQRREAA-----NHYLAHCRAL  169 (176)
T ss_pred             cccccccCH-----HHHHHHHHHH
Confidence            999999985     9999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.45  E-value=0.00018  Score=63.53  Aligned_cols=30  Identities=30%  Similarity=0.609  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      .++.+||.+||..+|.+|++.     .+++.|+||
T Consensus       262 ~~~~~li~~~L~~~p~~Rps~-----~e~l~~~~f  291 (291)
T cd07844         262 PHGEELALKFLQYEPKKRISA-----AEAMKHPYF  291 (291)
T ss_pred             hhHHHHHHHHhccCcccccCH-----HHHhcCCCC
Confidence            888999999999999999985     999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0595|consensus

Probab=97.42  E-value=0.00011  Score=68.78  Aligned_cols=82  Identities=29%  Similarity=0.417  Sum_probs=65.2

Q ss_pred             ccccCCCCCCCCceeh-----HhhhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAER-----NILEAVKPPFTADNRKKTIEKILRGKL---ILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-----~~ml~G~pPF~~~~~~~l~~~Il~~~~---~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||++.++|.+..+.|.     |+|++|++||...+..+++..|..+.-   .+|..++....+|+..+|++++..|.+. 
T Consensus       184 EV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~-  262 (429)
T KOG0595|consen  184 EVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISF-  262 (429)
T ss_pred             HHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCch-
Confidence            8888665665555442     599999999999999999999887653   3445789999999999999999999975 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          .+...|+|...
T Consensus       263 ----~~~~~~~~l~~  273 (429)
T KOG0595|consen  263 ----EDFFDHPFLAA  273 (429)
T ss_pred             ----HHhhhhhhccc
Confidence                77777777653

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=97.42  E-value=0.0003  Score=59.67  Aligned_cols=62  Identities=26%  Similarity=0.386  Sum_probs=46.8

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHc-CCCCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILR-GKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF   91 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~-~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~Hpf   91 (258)
                      +|++|.+||...+.......+.. ....++.  .++.++.++|.+||..||.+|+++     .+|+.|||
T Consensus       189 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~-----~~~l~~~~  253 (253)
T cd05122         189 ELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTA-----EQLLKHPF  253 (253)
T ss_pred             HHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCH-----HHHhcCCC
Confidence            78899999987755554444433 2222333  348999999999999999999985     99999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.39  E-value=0.00019  Score=66.21  Aligned_cols=35  Identities=29%  Similarity=0.409  Sum_probs=31.3

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      ++.++.+||.+||..||.+|+++     +++++||||+.+
T Consensus       323 ~~~~~~~li~~mL~~dP~~Rpta-----~e~l~hp~f~~~  357 (357)
T PHA03209        323 LPIDGEFLVHKMLTFDAAMRPSA-----EEILNYPMFAQL  357 (357)
T ss_pred             CCchHHHHHHHHHcCCcccCcCH-----HHHhcCchhccC
Confidence            56788899999999999999985     999999999854

>KOG0671|consensus

Probab=97.33  E-value=0.00013  Score=67.94  Aligned_cols=82  Identities=21%  Similarity=0.295  Sum_probs=58.4

Q ss_pred             cccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHH---HHHHHHcC------------------CCCCCC-
Q psy1025           5 RKASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKK---TIEKILRG------------------KLILPP-   54 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~---l~~~Il~~------------------~~~~P~-   54 (258)
                      |-=|||.|   -|-+..|| |       |+.+|..-|+..+..+   ++++|+-.                  .+.+|. 
T Consensus       276 RAPEViLg---LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~  352 (415)
T KOG0671|consen  276 RAPEVILG---LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEV  352 (415)
T ss_pred             CCchheec---cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccc
Confidence            34589996   68889998 3       7889999997654333   56665531                  122221 


Q ss_pred             ---------------------CCC---HHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 ---------------------YLT---PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 ---------------------~~S---~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                                           ..+   .+.-|||++||..||.+|+++     .|++.||||..
T Consensus       353 ~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl-----~EAL~HpFF~~  411 (415)
T KOG0671|consen  353 SSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL-----REALSHPFFAR  411 (415)
T ss_pred             cccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH-----HHHhcCHHhhc
Confidence                                 012   346789999999999999996     89999999975

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.29  E-value=0.0004  Score=61.40  Aligned_cols=31  Identities=26%  Similarity=0.579  Sum_probs=28.8

Q ss_pred             CHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          57 TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        57 S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +.++.+||.+||..||.+|+++     ++++.||||
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t~-----~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRISA-----QDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcCH-----HHHhcCCCC
Confidence            5688999999999999999985     999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.21  E-value=0.00085  Score=58.41  Aligned_cols=62  Identities=24%  Similarity=0.406  Sum_probs=49.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFF   92 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF   92 (258)
                      +|++|.+||...........+...  ...+|..++.+++++|.++|. ++..|++.     .+++.|||.
T Consensus       201 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~-----~~~~~~~~~  264 (264)
T cd06653         201 EMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTA-----EFLLRHPFV  264 (264)
T ss_pred             HHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccH-----HHHhcCCCC
Confidence            788999999877666655555543  345788899999999999999 57999985     899999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.19  E-value=0.00047  Score=66.49  Aligned_cols=34  Identities=26%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ++.++.+||.+||..||.+|+++     .||++||||+.
T Consensus       427 ~~~~~~dli~~mL~~DP~~RPsa-----~elL~hp~f~~  460 (461)
T PHA03211        427 LDLDVEYLVCRALTFDGARRPSA-----AELLRLPLFQS  460 (461)
T ss_pred             ccchHHHHHHHHcccChhhCcCH-----HHHhhCcccCC
Confidence            56789999999999999999985     99999999974

>KOG0591|consensus

Probab=97.16  E-value=0.00047  Score=62.28  Aligned_cols=68  Identities=25%  Similarity=0.290  Sum_probs=58.3

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCC-CC-CCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLI-LP-PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~-~P-~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|+|++.   +|+...|        |+|.+-.+||++++..++..+|.++.+. .| ...|.+...||.-||..|+..|+
T Consensus       197 PE~i~~~---~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP  273 (375)
T KOG0591|consen  197 PERIHES---GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRP  273 (375)
T ss_pred             HHHHhcC---CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCC
Confidence            3788864   5666555        3899999999999999999999999765 67 57899999999999999999999


Q ss_pred             C
Q psy1025          77 G   77 (258)
Q Consensus        77 g   77 (258)
                      +
T Consensus       274 ~  274 (375)
T KOG0591|consen  274 D  274 (375)
T ss_pred             C
Confidence            7

>KOG0659|consensus

Probab=97.16  E-value=0.00064  Score=60.84  Aligned_cols=82  Identities=22%  Similarity=0.352  Sum_probs=62.3

Q ss_pred             ccccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C-----------------C-CCCC---
Q psy1025           6 KASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K-----------------L-ILPP---   54 (258)
Q Consensus         6 ~~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~-----------------~-~~P~---   54 (258)
                      --|++-|  ..-|+..||.        ||+.|.|=|.+++.-+....|...  .                 + .+|.   
T Consensus       169 APELLfG--sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~  246 (318)
T KOG0659|consen  169 APELLFG--SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPL  246 (318)
T ss_pred             ChHHhcc--chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcc
Confidence            3477777  4679999993        888898778888777666666531  0                 0 1221   


Q ss_pred             -----CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 -----YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 -----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                           ..+.++.||+.+||..||.+|+++     .+..+|+||..
T Consensus       247 ~~lf~aas~d~ldLl~~m~~ynP~~Rita-----~qaL~~~yf~~  286 (318)
T KOG0659|consen  247 NNLFPAASSDALDLLSKMLTYNPKKRITA-----SQALKHPYFKS  286 (318)
T ss_pred             ccccccccHHHHHHHHhhhccCchhcccH-----HHHhcchhhhc
Confidence                 257889999999999999999996     89999999984

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=97.13  E-value=0.00081  Score=58.76  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=56.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~~-~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++..+|+        +|++ |..||...+.......|....+. .|..++.++++||.+||..||.+|+
T Consensus       193 PE~~~~---~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  269 (280)
T cd05049         193 PESIMY---RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRI  269 (280)
T ss_pred             hhhhcc---CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            355654   346666773        7777 99999988888888888876554 3557899999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      +.     .+|+
T Consensus       270 ~~-----~eil  275 (280)
T cd05049         270 NI-----KDIH  275 (280)
T ss_pred             CH-----HHHH
Confidence            75     6664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0596|consensus

Probab=97.11  E-value=0.00048  Score=66.93  Aligned_cols=68  Identities=19%  Similarity=0.259  Sum_probs=51.1

Q ss_pred             HhhhcCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHH-HHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          24 NILEAVKPPFTAD-NRKKTIEKILR--GKLILPPYLTPD-ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        24 ~~ml~G~pPF~~~-~~~~l~~~Il~--~~~~~P~~~S~e-a~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      |.|+.|++||..- +...-+..|..  .++.||..-+.. +.++++.||.+||.+|.++     .++++|||...+.
T Consensus       563 YqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si-----~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  563 YQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSI-----PELLQHPFLQIQP  634 (677)
T ss_pred             HHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCc-----HHHhcCccccccc
Confidence            4999999999642 23333444543  346787755544 9999999999999999985     9999999998643

>KOG0589|consensus

Probab=97.10  E-value=0.00086  Score=63.81  Aligned_cols=81  Identities=22%  Similarity=0.333  Sum_probs=68.6

Q ss_pred             ccccCCCCCCCCceeh-----HhhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCC
Q psy1025           8 SIVRNQKDTAHTKAER-----NILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-----~~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      ||+.|..|......|+     |+|++-+++|.+.+...+..+|.... ...|...|.+.+.||+.+|.++|..|+.+   
T Consensus       176 Eil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa---  252 (426)
T KOG0589|consen  176 EILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSA---  252 (426)
T ss_pred             HHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCH---
Confidence            7888765555555554     39999999999999999999999887 45677899999999999999999999985   


Q ss_pred             CchhhccCCccc
Q psy1025          82 DGEAVRVHPFFR   93 (258)
Q Consensus        82 g~~eIk~HpfF~   93 (258)
                        .+++.+|...
T Consensus       253 --~~LL~~P~l~  262 (426)
T KOG0589|consen  253 --LELLRRPHLL  262 (426)
T ss_pred             --HHHhhChhhh
Confidence              8999998765

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=97.09  E-value=0.00076  Score=59.13  Aligned_cols=68  Identities=15%  Similarity=0.097  Sum_probs=54.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|+        +|++ |..||.+.+..++...|.... ...|..++.++.+|+.+||..||.+|++.     .+|
T Consensus       202 ~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-----~~i  276 (283)
T cd05048         202 KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRF-----KDI  276 (283)
T ss_pred             cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            35555663        7776 999999988888888877654 34567889999999999999999999985     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .++
T Consensus       277 ~~~  279 (283)
T cd05048         277 HTR  279 (283)
T ss_pred             HHH
Confidence            653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=97.09  E-value=0.001  Score=57.83  Aligned_cols=62  Identities=15%  Similarity=0.193  Sum_probs=51.2

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|+        +|++ |.+||.+.+..+++..+... ....|..++.++.+||.+||..+|.+|++.
T Consensus       181 ~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  252 (263)
T cd05052         181 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSF  252 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            45556673        7777 99999998888888887764 456677899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=97.09  E-value=0.0011  Score=57.39  Aligned_cols=62  Identities=15%  Similarity=0.198  Sum_probs=50.5

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++...|+        +|++ |.+||.+.+...+...|.... +..|..++.++++||.+|+..||..|++.
T Consensus       174 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~  245 (257)
T cd05116         174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGF  245 (257)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCH
Confidence            45556663        7776 999999888888888877643 45677899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0667|consensus

Probab=97.09  E-value=0.0009  Score=65.69  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=62.3

Q ss_pred             cccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC----------------------------
Q psy1025           5 RKASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG----------------------------   48 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~----------------------------   48 (258)
                      |-=|||.|   ..|+.++| |       ||++|.|-|.+++..+.+..|+..                            
T Consensus       355 RAPEVILG---lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~  431 (586)
T KOG0667|consen  355 RAPEVILG---LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRL  431 (586)
T ss_pred             ccchhhcc---CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceee
Confidence            34599997   57888888 3       999999999999887776655430                            


Q ss_pred             ------------------------CCCCCC-----------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          49 ------------------------KLILPP-----------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        49 ------------------------~~~~P~-----------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                                              ....|.           .-.....|||++||..||.+|++.     .+.++||||.
T Consensus       432 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp-----~qal~Hpfl~  506 (586)
T KOG0667|consen  432 CVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP-----AQALNHPFLT  506 (586)
T ss_pred             eeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH-----HHHhcCcccc
Confidence                                    011220           012456899999999999999985     8999999998


Q ss_pred             cC
Q psy1025          94 SI   95 (258)
Q Consensus        94 ~i   95 (258)
                      +.
T Consensus       507 ~~  508 (586)
T KOG0667|consen  507 GT  508 (586)
T ss_pred             cc
Confidence            64

>KOG0661|consensus

Probab=97.05  E-value=0.001  Score=63.65  Aligned_cols=82  Identities=21%  Similarity=0.303  Sum_probs=62.5

Q ss_pred             ccccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc-------------------CCCCCCC----
Q psy1025           6 KASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR-------------------GKLILPP----   54 (258)
Q Consensus         6 ~~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~-------------------~~~~~P~----   54 (258)
                      -=|||.-  ..-|+..+|.        |+.+-+|-|.|.+..+...+|..                   -.+.+|.    
T Consensus       177 APEvLLr--s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~  254 (538)
T KOG0661|consen  177 APEVLLR--SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPS  254 (538)
T ss_pred             chHHhhh--ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCC
Confidence            3467663  3578999994        66678899999888776665543                   0133442    


Q ss_pred             -------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 -------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 -------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                             ..+.++.+||.+||.-||.+|+++     .+.++||||+.
T Consensus       255 ~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA-----~~al~~pffq~  296 (538)
T KOG0661|consen  255 PLKDLLPNASSEAASLIERLLAWDPDKRPTA-----SQALQHPFFQV  296 (538)
T ss_pred             ChHHhCcccCHHHHHHHHHHhcCCCccCccH-----HHHhcCccccc
Confidence                   368999999999999999999986     99999999973

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=97.02  E-value=0.0012  Score=58.41  Aligned_cols=68  Identities=19%  Similarity=0.198  Sum_probs=53.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++...|+        +|++ |.+||...+.......|.... ...+..++.++.+||.+||..||.+|++
T Consensus       192 E~~~~---~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  268 (288)
T cd05093         192 ESIMY---RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLN  268 (288)
T ss_pred             HHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            55553   346666673        7777 999999888888888888765 3456678999999999999999999998


Q ss_pred             C
Q psy1025          78 S   78 (258)
Q Consensus        78 ~   78 (258)
                      .
T Consensus       269 ~  269 (288)
T cd05093         269 I  269 (288)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0574|consensus

Probab=97.01  E-value=0.00012  Score=66.74  Aligned_cols=79  Identities=14%  Similarity=0.248  Sum_probs=58.5

Q ss_pred             ccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHc-CCCCC--CCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILR-GKLIL--PPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~-~~~~~--P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |||.   ..||...+| |       +|.-|+|||.+--+-.....|-. -++.|  |..+|.+.-|+|+.||.+.|.+|.
T Consensus       199 EVI~---EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~  275 (502)
T KOG0574|consen  199 EVIE---EIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERK  275 (502)
T ss_pred             HHHH---HhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHH
Confidence            6777   468888777 4       88899999976444332222222 22233  456899999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     .++.+|+|.++
T Consensus       276 TA-----~~L~~H~Fikn  288 (502)
T KOG0574|consen  276 TA-----LRLCEHTFIKN  288 (502)
T ss_pred             HH-----HHHhhhhhhcC
Confidence            85     89999999974

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=97.00  E-value=0.0012  Score=57.28  Aligned_cols=68  Identities=12%  Similarity=0.150  Sum_probs=54.0

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++...|+        +|++ |.+||.+.+..+++..+... .+..|..++.++.+||.+||..||.+|++.     .+
T Consensus       190 ~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~e  264 (273)
T cd05035         190 RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTF-----TK  264 (273)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-----HH
Confidence            345566663        7777 99999988888888877754 455677899999999999999999999974     67


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       265 ~~~  267 (273)
T cd05035         265 LRE  267 (273)
T ss_pred             HHH
Confidence            654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=96.97  E-value=0.0013  Score=57.64  Aligned_cols=68  Identities=10%  Similarity=0.092  Sum_probs=53.4

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|.        +|++ |..||.+.+..++...+.. ....+|..++.++.+||.+||..+|.+|++.     .+|
T Consensus       197 ~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-----~~v  271 (277)
T cd05036         197 IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-----ATI  271 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHH
Confidence            35666663        6665 9999998888777776654 3456677889999999999999999999985     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      ++|
T Consensus       272 l~~  274 (277)
T cd05036         272 LER  274 (277)
T ss_pred             HHH
Confidence            765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0594|consensus

Probab=96.96  E-value=0.002  Score=59.21  Aligned_cols=85  Identities=26%  Similarity=0.433  Sum_probs=65.9

Q ss_pred             cccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC------------------CCCCCC----
Q psy1025           5 RKASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG------------------KLILPP----   54 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~------------------~~~~P~----   54 (258)
                      |=-|||.|.  +.|...|| |       +|+++++-|.+.+......+|...                  +..||.    
T Consensus       187 RaPEvLlGs--~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~  264 (323)
T KOG0594|consen  187 RAPEVLLGS--TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP  264 (323)
T ss_pred             cCHHHhcCC--CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCc
Confidence            345899984  66999999 4       999999999998887777766531                  112221    


Q ss_pred             --------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          55 --------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        55 --------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                              ..+.++.+|+.+||+.+|.+|+++     +..+.||||..+.
T Consensus       265 ~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa-----~~al~h~yf~~~~  309 (323)
T KOG0594|consen  265 KDLSSILPKLDPDGIELLSKLLQYDPAKRISA-----KGALTHPYFSELP  309 (323)
T ss_pred             cchHHhccccCccHHHHHHHHhccCcccCcCH-----HHHhcChhhcccc
Confidence                    134589999999999999999985     9999999998763

>KOG0983|consensus

Probab=96.95  E-value=0.0015  Score=58.90  Aligned_cols=65  Identities=20%  Similarity=0.389  Sum_probs=54.0

Q ss_pred             hhhcCCCCCCCC-CHHHHHHHHHcCCC-CCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTAD-NRKKTIEKILRGKL-ILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~-~~~~l~~~Il~~~~-~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ++.+|..||.+. +.-++..+|++..+ .+|.  .+|+..++|+..+|++|+.+|...     .++++|||+..
T Consensus       286 eLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y-----~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  286 ELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKY-----NKLLEHPFIKR  354 (391)
T ss_pred             hhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcch-----HHHhcCcceee
Confidence            888999999874 45677888887543 3443  489999999999999999999985     89999999974

>KOG1027|consensus

Probab=96.93  E-value=0.00089  Score=67.66  Aligned_cols=80  Identities=24%  Similarity=0.336  Sum_probs=57.5

Q ss_pred             ccccCCCCCCCCceehH---------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN---------ILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~---------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |+++++   -.+.+||.         ++--|..||-.  ..+.-.+|+.+.+..-.   ....+|+|||.+||..+|..|
T Consensus       684 E~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd--~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~R  758 (903)
T KOG1027|consen  684 EQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGD--SLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLR  758 (903)
T ss_pred             HHHhcc---ccCcccchhhcCceEEEEecCCccCCCc--hHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccC
Confidence            666653   33558885         44457999954  33444678887655421   222399999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +++     .+|+.||||.  +|++
T Consensus       759 Psa-----~~VL~HPlFW--~~ek  775 (903)
T KOG1027|consen  759 PSA-----TDVLNHPLFW--DSEK  775 (903)
T ss_pred             CCH-----HHHhCCCccC--ChHH
Confidence            985     9999999996  5654

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=96.89  E-value=0.0018  Score=56.17  Aligned_cols=54  Identities=20%  Similarity=0.308  Sum_probs=45.2

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||.+.+..+....+... .+..|...+.++++||.+||.++|.+|++.
T Consensus       195 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         195 ELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCH
Confidence            7777 99999988888877777654 445566789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=96.87  E-value=0.002  Score=57.36  Aligned_cols=67  Identities=16%  Similarity=0.199  Sum_probs=53.5

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+...++..+... ....|..++.++++||.+||..+|.+|++.     ++|
T Consensus       194 ~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i  268 (297)
T cd05089         194 VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPF-----AQI  268 (297)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            46666773        7776 99999998888888887654 344566789999999999999999999985     776


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      ..
T Consensus       269 ~~  270 (297)
T cd05089         269 SV  270 (297)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=96.84  E-value=0.0022  Score=55.40  Aligned_cols=68  Identities=16%  Similarity=0.141  Sum_probs=53.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|.        +|++ |++||...+..+.+..|.... +..|...+.++.+||.+|+..+|.+|++
T Consensus       171 E~~~~---~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps  247 (256)
T cd05114         171 EVFNF---SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPT  247 (256)
T ss_pred             hhccc---CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence            45553   345666663        7777 999999988888888887653 3456678899999999999999999997


Q ss_pred             C
Q psy1025          78 S   78 (258)
Q Consensus        78 ~   78 (258)
                      .
T Consensus       248 ~  248 (256)
T cd05114         248 F  248 (256)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=96.84  E-value=0.002  Score=56.07  Aligned_cols=68  Identities=15%  Similarity=0.173  Sum_probs=53.3

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++...|+        +|++ |.+||.+.....++..+.... +..+..++..+++||.+||..||.+|++.     ++
T Consensus       189 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~  263 (272)
T cd05075         189 RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSF-----ET  263 (272)
T ss_pred             CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HH
Confidence            346666773        6677 899999888888888777654 35566788999999999999999999974     67


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       264 l~~  266 (272)
T cd05075         264 LRC  266 (272)
T ss_pred             HHH
Confidence            654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0665|consensus

Probab=96.84  E-value=0.0017  Score=59.41  Aligned_cols=94  Identities=17%  Similarity=0.278  Sum_probs=65.4

Q ss_pred             ccccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHcC------------------------C---C
Q psy1025           6 KASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILRG------------------------K---L   50 (258)
Q Consensus         6 ~~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~~------------------------~---~   50 (258)
                      --||++|   .+|...|| |       +|+.|..-|.|.+....+.+|...                        +   .
T Consensus       185 apevil~---~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~  261 (369)
T KOG0665|consen  185 APEVILG---MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI  261 (369)
T ss_pred             Cchheec---cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence            3488896   56888888 3       899999999888766655544320                        0   1


Q ss_pred             ----CCCC-----------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          51 ----ILPP-----------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        51 ----~~P~-----------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                          .||.           .=+..++||+.+||..||.+|+.     +++++.||||+  -|  .....++.|..+
T Consensus       262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ris-----v~daL~HPY~~--vw--~~~~ev~ap~pe  328 (369)
T KOG0665|consen  262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRIS-----VDDALRHPYIK--VW--YDPDEVEAPPPE  328 (369)
T ss_pred             chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhccc-----HHHHhcCCeee--ee--cccccccCCCCc
Confidence                1222           11356899999999999999997     59999999998  56  223445444433

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=96.79  E-value=0.0025  Score=56.02  Aligned_cols=68  Identities=10%  Similarity=0.110  Sum_probs=52.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+...+...+.... +..|..++.++++||.+||..||.+|++.     .+|
T Consensus       202 ~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~i  276 (283)
T cd05090         202 KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRF-----KDI  276 (283)
T ss_pred             CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-----HHH
Confidence            45666773        7777 999999887777777665543 44567789999999999999999999975     666


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .++
T Consensus       277 ~~~  279 (283)
T cd05090         277 HTR  279 (283)
T ss_pred             HHH
Confidence            543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=96.79  E-value=0.0025  Score=56.13  Aligned_cols=66  Identities=20%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||...+.......+... ....|..++.++.+||.+||.+||.+|++.     ++|
T Consensus       200 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-----~~l  274 (280)
T cd05092         200 KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVI-----KDI  274 (280)
T ss_pred             CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCH-----HHH
Confidence            45556663        7776 99999887777777777654 345567789999999999999999999985     666


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       275 ~  275 (280)
T cd05092         275 H  275 (280)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=96.75  E-value=0.0024  Score=54.56  Aligned_cols=68  Identities=15%  Similarity=0.179  Sum_probs=53.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|.        +|++ |..||...+...+...+... ....|..++.++.++|.+||..+|.+|+++     .+|
T Consensus       183 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~l  257 (262)
T cd00192         183 IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTF-----SEL  257 (262)
T ss_pred             CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCH-----HHH
Confidence            45555662        6676 69999998888888887753 456677889999999999999999999975     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .+|
T Consensus       258 ~~~  260 (262)
T cd00192         258 VER  260 (262)
T ss_pred             HHh
Confidence            654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=96.72  E-value=0.0028  Score=54.54  Aligned_cols=67  Identities=16%  Similarity=0.207  Sum_probs=51.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||...+...+...+... .+..|...+.++.+|+.+||..+|.+|++.     .++
T Consensus       177 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~~  251 (256)
T cd05112         177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSF-----SLL  251 (256)
T ss_pred             CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCH-----HHH
Confidence            45666673        6676 99999988888888777654 334466688999999999999999999975     666


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      ++
T Consensus       252 l~  253 (256)
T cd05112         252 LH  253 (256)
T ss_pred             HH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=96.70  E-value=0.0032  Score=54.51  Aligned_cols=62  Identities=18%  Similarity=0.224  Sum_probs=48.0

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|.        +|++ |++||.+.+...+...+... ....|..++.+.++||.+||..+|.+|++.
T Consensus       179 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         179 TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            45556663        6777 99999988877777766543 234556788999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=96.69  E-value=0.0034  Score=54.21  Aligned_cols=62  Identities=10%  Similarity=0.162  Sum_probs=49.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++...|+        +|++ |.+||...+..+++..+... ....|...+.++.++|.+||.+||.+|++.
T Consensus       180 ~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (261)
T cd05148         180 TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSF  251 (261)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            45555663        6666 89999988888888887754 344566789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=96.65  E-value=0.0026  Score=56.94  Aligned_cols=68  Identities=16%  Similarity=0.194  Sum_probs=52.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+..+.+..+... ....|..++.++.+||.+||..+|.+|++.     ++|
T Consensus       199 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i  273 (303)
T cd05088         199 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQI  273 (303)
T ss_pred             CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            45666673        7776 99999988887777776544 234566688999999999999999999985     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      +.+
T Consensus       274 l~~  276 (303)
T cd05088         274 LVS  276 (303)
T ss_pred             HHH
Confidence            654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=96.64  E-value=0.0033  Score=54.57  Aligned_cols=54  Identities=19%  Similarity=0.283  Sum_probs=44.7

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||.+.+.......+... ....|..++..+++||.+||.+||.+|++.
T Consensus       195 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         195 ELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence            7887 99999988887777777654 344566789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=96.61  E-value=0.0034  Score=56.05  Aligned_cols=67  Identities=12%  Similarity=0.076  Sum_probs=52.5

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|+        +|++ |.+||.+.+...++..+.... ...|..++.++++||.+||..+|.+|++.     .+|
T Consensus       218 ~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ev  292 (307)
T cd05098         218 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-----KQL  292 (307)
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCH-----HHH
Confidence            45666673        6776 899999888888777776553 45677889999999999999999999975     666


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       293 l~  294 (307)
T cd05098         293 VE  294 (307)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=96.60  E-value=0.0043  Score=53.66  Aligned_cols=67  Identities=10%  Similarity=0.146  Sum_probs=51.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|+        +|++ |.+||...+..+....+... .+..|...+.++.+|+.+||..+|.+|++.     .+|
T Consensus       177 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~~~  251 (256)
T cd05059         177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAF-----KKL  251 (256)
T ss_pred             CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCH-----HHH
Confidence            45555663        6676 89999887777777777654 345566789999999999999999999975     666


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       252 l~  253 (256)
T cd05059         252 LS  253 (256)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=96.59  E-value=0.0042  Score=53.30  Aligned_cols=72  Identities=13%  Similarity=0.122  Sum_probs=54.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++...|+        +|++ |.+||...+.......+... .+..|..++.+..+||.+||..+|.+|++
T Consensus       165 E~~~~---~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  241 (251)
T cd05041         165 EALNY---GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPS  241 (251)
T ss_pred             Hhhcc---CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcC
Confidence            45543   346666673        7777 89999888777777776543 34556778999999999999999999997


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      .     .+|.
T Consensus       242 ~-----~ell  246 (251)
T cd05041         242 F-----SEIY  246 (251)
T ss_pred             H-----HHHH
Confidence            5     6664

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=96.59  E-value=0.0042  Score=53.66  Aligned_cols=62  Identities=15%  Similarity=0.265  Sum_probs=48.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++...|+        +|++ |++||.+.+.......+... ....|...+.+++++|.+||..+|.+|++.
T Consensus       180 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            45666663        6777 99999988888778877654 344556678999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0669|consensus

Probab=96.58  E-value=0.0022  Score=57.34  Aligned_cols=80  Identities=19%  Similarity=0.317  Sum_probs=60.4

Q ss_pred             cccccCCCCCCCCceeh-H-------hhhcCCCCCCCCCHHHHHHHHHc--CCC---CC-----------------CC--
Q psy1025           7 ASIVRNQKDTAHTKAER-N-------ILEAVKPPFTADNRKKTIEKILR--GKL---IL-----------------PP--   54 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD-~-------~ml~G~pPF~~~~~~~l~~~Il~--~~~---~~-----------------P~--   54 (258)
                      -|.|.|  +..|+..+| |       +|.++.|-|.+++.......|..  +.+   .+                 |.  
T Consensus       197 pEllLG--~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~  274 (376)
T KOG0669|consen  197 PELLLG--DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQ  274 (376)
T ss_pred             HHHhhc--ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcch
Confidence            477887  678999999 4       88899999998887766665532  110   11                 11  


Q ss_pred             -----------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          55 -----------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        55 -----------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                                 .-..++.||+..||..||.+|+.+     ++..+|-||.
T Consensus       275 ~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a-----d~alnh~~F~  319 (376)
T KOG0669|consen  275 KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA-----DQALNHDFFW  319 (376)
T ss_pred             hhhhhhhcccccCChhHHHHHHHHhccCcccCcch-----Hhhhchhhhh
Confidence                       124589999999999999999985     9999999996

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=96.58  E-value=0.0037  Score=54.26  Aligned_cols=58  Identities=14%  Similarity=0.265  Sum_probs=46.8

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++ |..||...+..++...|... .+..+..++..+.+||.+||.++|.+|++.     ++|+
T Consensus       205 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~  264 (269)
T cd05044         205 EILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTF-----DRIQ  264 (269)
T ss_pred             HHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCH-----HHHH
Confidence            7776 99999887777777776543 455677889999999999999999999985     6664

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.57  E-value=0.0036  Score=61.23  Aligned_cols=42  Identities=21%  Similarity=0.226  Sum_probs=33.8

Q ss_pred             CCCCCC--CCCCHHHHHHHHHHhhccc---ccccCCCCCCchhhccCCcccc
Q psy1025          48 GKLILP--PYLTPDARELIRKLLKRQV---AQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        48 ~~~~~P--~~~S~ea~dLI~~LL~kdP---~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ..+.++  ..++.+++|||++||.+++   .+|+++     +++++||||..
T Consensus       459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa-----~eaL~Hp~f~~  505 (507)
T PLN03224        459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV-----GQALSHRFFLP  505 (507)
T ss_pred             cCCCcccccccChHHHHHHHHHhccCCCCcccCCCH-----HHHhCCCCcCC
Confidence            344454  3579999999999999876   679985     99999999963

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.56  E-value=0.0029  Score=62.57  Aligned_cols=37  Identities=22%  Similarity=0.419  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      ..+.+||.+||++||.+|+++     .++++||||.+.+|..
T Consensus       424 ~~~~dLi~~mL~~dP~kR~ta-----~e~L~Hpff~~~~~~~  460 (566)
T PLN03225        424 GAGWELLKSMMRFKGRQRISA-----KAALAHPYFDREGLLG  460 (566)
T ss_pred             hHHHHHHHHHccCCcccCCCH-----HHHhCCcCcCCCCccc
Confidence            345699999999999999985     9999999999888763

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=96.55  E-value=0.0054  Score=53.10  Aligned_cols=54  Identities=11%  Similarity=0.231  Sum_probs=44.5

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |++||.+.+...+...+... .+..+..++..+.+||.+||..+|.+|++.
T Consensus       196 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  251 (261)
T cd05068         196 EIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTF  251 (261)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCH
Confidence            7777 99999988888777777654 344556788999999999999999999975

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=96.54  E-value=0.004  Score=53.78  Aligned_cols=72  Identities=14%  Similarity=0.211  Sum_probs=54.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++...|+        +|++ |.+||...+...+...|... ....+..++...++||.+||..+|.+|++
T Consensus       169 E~~~~---~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  245 (256)
T cd05082         169 EALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPS  245 (256)
T ss_pred             HHHcc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            45553   346666663        6665 99999988888887777654 34456678999999999999999999997


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      .     .+|.
T Consensus       246 ~-----~~l~  250 (256)
T cd05082         246 F-----LQLR  250 (256)
T ss_pred             H-----HHHH
Confidence            5     6664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=96.51  E-value=0.0049  Score=53.97  Aligned_cols=67  Identities=13%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+.......+.... ...|..++..+++||.+||+.+|.+|++.     .++
T Consensus       197 ~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~  271 (277)
T cd05062         197 VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEI  271 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            45566663        6776 799999888888777776654 34566788999999999999999999985     666


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      ..
T Consensus       272 l~  273 (277)
T cd05062         272 IS  273 (277)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=96.50  E-value=0.0055  Score=53.73  Aligned_cols=67  Identities=10%  Similarity=0.037  Sum_probs=54.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|+        +|++ |.+||.+.+.......|..... .+|..++.+..+||.+||..+|.+|++.     .+|
T Consensus       202 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-----~~i  276 (283)
T cd05091         202 KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-----KDI  276 (283)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-----HHH
Confidence            45666673        7776 9999999888888888877654 4567899999999999999999999975     777


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      ..
T Consensus       277 ~~  278 (283)
T cd05091         277 HS  278 (283)
T ss_pred             HH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=96.49  E-value=0.0035  Score=58.29  Aligned_cols=68  Identities=10%  Similarity=0.147  Sum_probs=49.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++ |.+||........+..+...  ....|..++.++++||.+||..||.+|+
T Consensus       284 E~~~~---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP  360 (374)
T cd05106         284 ESIFD---CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERP  360 (374)
T ss_pred             HHhcC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            55543   357777773        6775 99999876555444444433  3445667899999999999999999999


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      +.
T Consensus       361 s~  362 (374)
T cd05106         361 TF  362 (374)
T ss_pred             CH
Confidence            85

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=96.47  E-value=0.0055  Score=53.25  Aligned_cols=59  Identities=12%  Similarity=0.132  Sum_probs=46.8

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |..||.......+...|... ....|...+..+.+||.+||..+|.+|++.     .+|.+
T Consensus       200 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~-----~ei~~  260 (266)
T cd05033         200 EVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTF-----SQIVS  260 (266)
T ss_pred             HHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence            5565 99999887777777777654 334556789999999999999999999975     66654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=96.47  E-value=0.0047  Score=53.74  Aligned_cols=62  Identities=13%  Similarity=0.131  Sum_probs=48.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|.        +|++ |.+||.+.+.......+..+ ....|...+.++.+||.+|+..+|.+|++.
T Consensus       174 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~  245 (257)
T cd05115         174 KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNF  245 (257)
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            45556663        6664 99999988777777666654 355677889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0670|consensus

Probab=96.45  E-value=0.002  Score=62.54  Aligned_cols=32  Identities=25%  Similarity=0.455  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ..+++||.+||..||.+|++.     .+.++||||.+
T Consensus       720 ~~~rdLLdkml~LdP~KRit~-----nqAL~HpFi~~  751 (752)
T KOG0670|consen  720 QQLRDLLDKMLILDPEKRITV-----NQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHHhccChhhcCCH-----HHHhcCCcccC
Confidence            467899999999999999985     89999999964

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=96.44  E-value=0.0058  Score=53.83  Aligned_cols=69  Identities=12%  Similarity=0.075  Sum_probs=52.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++..+|+        +|++ |..||.+.+..++...+..... ..|..++.++.+||.+||..+|.+|+
T Consensus       201 PE~~~~---~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  277 (288)
T cd05050         201 PESIFY---NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRP  277 (288)
T ss_pred             HHHHhc---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCC
Confidence            344543   356666773        6665 8899998888888887776654 34667889999999999999999999


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      ++
T Consensus       278 t~  279 (288)
T cd05050         278 SF  279 (288)
T ss_pred             CH
Confidence            85

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=96.44  E-value=0.0055  Score=54.20  Aligned_cols=69  Identities=17%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++...|.        +|++ |.+||...+..+....+..... ..+...+.++.+||.+||.++|.+|+
T Consensus       194 PE~~~~---~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  270 (291)
T cd05094         194 PESIMY---RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRL  270 (291)
T ss_pred             hHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCc
Confidence            355554   345555662        7777 9999988888887777766543 34556789999999999999999999


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      +.
T Consensus       271 t~  272 (291)
T cd05094         271 NI  272 (291)
T ss_pred             CH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=96.43  E-value=0.0041  Score=56.32  Aligned_cols=72  Identities=11%  Similarity=0.164  Sum_probs=50.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHH-HHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTI-EKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~-~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+......+ ..+... .+..|..++.++++||.+||..||.+|+
T Consensus       246 E~~~~---~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP  322 (338)
T cd05102         246 ESIFD---KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP  322 (338)
T ss_pred             HHhhc---CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence            55554   346677773        6775 99999876544433 333333 3445677899999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      +.     .+|.
T Consensus       323 s~-----~el~  328 (338)
T cd05102         323 TF-----SALV  328 (338)
T ss_pred             CH-----HHHH
Confidence            75     6664

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=96.43  E-value=0.0059  Score=54.80  Aligned_cols=66  Identities=14%  Similarity=0.093  Sum_probs=52.3

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |..||.+.+...++..+.... ...|..++.+.++||.+||..+|.+|++.     .+|
T Consensus       212 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~~l  286 (314)
T cd05099         212 VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTF-----KQL  286 (314)
T ss_pred             CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHH
Confidence            46666773        5666 899999888888888776653 45667788999999999999999999975     565


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       287 l  287 (314)
T cd05099         287 V  287 (314)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=96.42  E-value=0.0067  Score=52.83  Aligned_cols=58  Identities=16%  Similarity=0.221  Sum_probs=47.7

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++ |.+||.+.+.......+... ...+|..++.++.+||.+||+.+|.+|++.     .+|.
T Consensus       213 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~  272 (277)
T cd05032         213 EMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF-----LEIV  272 (277)
T ss_pred             HhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            6676 99999988888877777644 355677889999999999999999999975     6664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=96.41  E-value=0.0059  Score=53.34  Aligned_cols=63  Identities=16%  Similarity=0.196  Sum_probs=49.7

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ..++..+|.        +|++ |.+||.+.+....+..+... .+..|..++.+..+||.+|+..+|.+|++.
T Consensus       186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  258 (270)
T cd05047         186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF  258 (270)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence            346666773        7775 99999988888877777654 344566788999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=96.39  E-value=0.0074  Score=52.12  Aligned_cols=54  Identities=13%  Similarity=0.078  Sum_probs=44.6

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||...+...+...|.... ...|..++...++||.+||..+|.+|++.
T Consensus       190 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  245 (257)
T cd05060         190 EAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTF  245 (257)
T ss_pred             HHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            7776 999998888777777776543 45667789999999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=96.39  E-value=0.0072  Score=51.81  Aligned_cols=54  Identities=11%  Similarity=0.160  Sum_probs=44.1

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |..||...+.......+... ....|..++.++.+||.+||..+|.+|++.
T Consensus       186 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  241 (250)
T cd05085         186 ETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKF  241 (250)
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            5666 99999888777777777654 345567789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=96.38  E-value=0.0072  Score=52.23  Aligned_cols=54  Identities=11%  Similarity=0.193  Sum_probs=43.3

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||...+...+...+... .+..+..++.++.+||.+||..+|.+|++.
T Consensus       196 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         196 EIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             HHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            7776 99999988887777777654 223334688999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=96.38  E-value=0.0062  Score=53.68  Aligned_cols=68  Identities=13%  Similarity=0.090  Sum_probs=52.8

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|+        +|++ |..||.+.+...++..+.... ...|...+.++.+||.+||..||.+|++.     .+
T Consensus       209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e  283 (293)
T cd05053         209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTF-----KQ  283 (293)
T ss_pred             CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-----HH
Confidence            346666673        5665 999999888888887776543 45667788999999999999999999975     67


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       284 il~  286 (293)
T cd05053         284 LVE  286 (293)
T ss_pred             HHH
Confidence            654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.37  E-value=0.0057  Score=53.06  Aligned_cols=74  Identities=15%  Similarity=0.157  Sum_probs=51.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcC-CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAV-KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G-~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      -|++.+  ...++...|+        +|++| .+||...+..... .+......+|...+.+..+||.+||..||.+|++
T Consensus       173 PE~~~~--~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  249 (258)
T cd05078         173 PECIEN--PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLPAPKWTELANLINQCMDYEPDFRPS  249 (258)
T ss_pred             chhccC--CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCCCCCcHHHHHHHHHHhccChhhCCC
Confidence            355553  1335555662        77888 5777665554433 3445566778788899999999999999999998


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      .     ++|.+
T Consensus       250 ~-----~~il~  255 (258)
T cd05078         250 F-----RAIIR  255 (258)
T ss_pred             H-----HHHHH
Confidence            5     66653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=96.33  E-value=0.0079  Score=52.35  Aligned_cols=67  Identities=21%  Similarity=0.274  Sum_probs=51.8

Q ss_pred             CCCCceehH--------hhh-cCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILE-AVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml-~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|+ .|.+||...+..+....+... .+..|..++.++++||.++|..+|.+|++.     .+
T Consensus       183 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~  257 (270)
T cd05056         183 RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRF-----TE  257 (270)
T ss_pred             CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HH
Confidence            356666773        556 499999988877777777654 355677889999999999999999999975     66


Q ss_pred             hc
Q psy1025          86 VR   87 (258)
Q Consensus        86 Ik   87 (258)
                      ++
T Consensus       258 ~~  259 (270)
T cd05056         258 LK  259 (270)
T ss_pred             HH
Confidence            55

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.33  E-value=0.0077  Score=51.91  Aligned_cols=58  Identities=14%  Similarity=0.256  Sum_probs=46.4

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++ |..||...+...+...+... ....|..++.++.+||.+||..+|.+|++.     ++|+
T Consensus       191 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  250 (256)
T cd05039         191 EIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTF-----KQLR  250 (256)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCH-----HHHH
Confidence            5554 99999988888877776654 345566789999999999999999999985     6664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=96.32  E-value=0.0083  Score=51.29  Aligned_cols=66  Identities=14%  Similarity=0.180  Sum_probs=51.3

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|.        +|++ |.+||...+...++..+.... ...+..++.++.++|.+||..+|.+|++.     .++
T Consensus       180 ~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~-----~~l  254 (258)
T smart00219      180 KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTF-----SEL  254 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCH-----HHH
Confidence            45555662        5665 899999888888888877654 34566789999999999999999999975     666


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       255 l  255 (258)
T smart00219      255 V  255 (258)
T ss_pred             H
Confidence            4

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=96.29  E-value=0.0078  Score=51.83  Aligned_cols=54  Identities=15%  Similarity=0.143  Sum_probs=43.7

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||...+..+....+...  .+..|..++.+..+||.+||..+|.+|++.
T Consensus       192 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  248 (257)
T cd05040         192 EMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTF  248 (257)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCH
Confidence            7776 99999888888777776643  234456788999999999999999999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=96.28  E-value=0.0079  Score=52.48  Aligned_cols=72  Identities=11%  Similarity=0.133  Sum_probs=53.5

Q ss_pred             ccccCCCCCCCCceehH--------hhh-cCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILE-AVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml-~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|.        +|+ +|.+||...+.......|... .+..|..++..+.++|.+|+..+|.+|++
T Consensus       178 E~~~~---~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~  254 (266)
T cd05064         178 EAIQY---HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPR  254 (266)
T ss_pred             HHHhh---CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCC
Confidence            55553   345566663        544 599999988888777777654 23456678899999999999999999997


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      .     ++|.
T Consensus       255 ~-----~~i~  259 (266)
T cd05064         255 F-----SQIH  259 (266)
T ss_pred             H-----HHHH
Confidence            5     6664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=96.28  E-value=0.0077  Score=52.43  Aligned_cols=62  Identities=15%  Similarity=0.276  Sum_probs=48.2

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|+        +|++ |.+||.+.+...+...|... .+..+..++..+.+||.+||.++|.+|++.
T Consensus       179 ~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~  250 (262)
T cd05071         179 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF  250 (262)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCH
Confidence            35556663        7777 89999888887777777654 234455788999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=96.25  E-value=0.0055  Score=56.07  Aligned_cols=69  Identities=13%  Similarity=0.167  Sum_probs=49.1

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHH-cC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKIL-RG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il-~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++..+|+        +|++ |.+||.+....+.+...+ .. ....|..++.++.+++.+||+.+|.+|+++     +
T Consensus       250 ~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~-----~  324 (337)
T cd05054         250 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTF-----S  324 (337)
T ss_pred             CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCH-----H
Confidence            356666774        6776 999998755444443333 32 234466788999999999999999999975     7


Q ss_pred             hhccC
Q psy1025          85 AVRVH   89 (258)
Q Consensus        85 eIk~H   89 (258)
                      +|.+|
T Consensus       325 ell~~  329 (337)
T cd05054         325 ELVEI  329 (337)
T ss_pred             HHHHH
Confidence            77654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=96.24  E-value=0.0077  Score=51.78  Aligned_cols=62  Identities=16%  Similarity=0.138  Sum_probs=47.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|+        +|++ |.+||...+.......+... ...+|..++..+.+||.+||..+|.+|++.
T Consensus       172 ~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  243 (252)
T cd05084         172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSF  243 (252)
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCH
Confidence            35555663        6665 99999877776666666543 445667789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=96.21  E-value=0.0095  Score=51.62  Aligned_cols=54  Identities=13%  Similarity=0.222  Sum_probs=43.2

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||.+.+...+...+... .+..+..++.++.+++.+||.++|.+|++.
T Consensus       195 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         195 EIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            6776 99999988777777766554 234456788999999999999999999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=96.19  E-value=0.01  Score=51.21  Aligned_cols=54  Identities=15%  Similarity=0.166  Sum_probs=43.5

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++ |.+||...+..+....+... .+..+..++.++++||.+||.++|..|++.
T Consensus       189 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         189 EVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             HHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            6665 99999988887777776654 233455688999999999999999999975

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=96.17  E-value=0.0094  Score=52.60  Aligned_cols=62  Identities=11%  Similarity=0.119  Sum_probs=48.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|.        +|++ |.+||.+.+...++..+... ....|..++.++++||..||..+|.+|++.
T Consensus       205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~  276 (290)
T cd05045         205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF  276 (290)
T ss_pred             CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            35555662        7777 99999988888877766543 344566789999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=96.16  E-value=0.01  Score=51.96  Aligned_cols=73  Identities=11%  Similarity=0.053  Sum_probs=52.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++..+|.        ++++ |.+||...+...+...+... .+..+..++.++++++.+|+..||.+|+
T Consensus       188 pE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  264 (280)
T cd05043         188 LESLVN---KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERP  264 (280)
T ss_pred             HHHHhc---CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCC
Confidence            344543   345666663        6676 99999988887777666543 2334456788999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      ++     .+|.
T Consensus       265 s~-----~~~~  270 (280)
T cd05043         265 SF-----SQLV  270 (280)
T ss_pred             CH-----HHHH
Confidence            85     6654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=96.12  E-value=0.0099  Score=53.18  Aligned_cols=66  Identities=8%  Similarity=0.089  Sum_probs=48.5

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++ |.+||...+....+..+....  ...|..++.++.+||.+||.++|.+|++.     .+
T Consensus       219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~e  293 (302)
T cd05055         219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTF-----KQ  293 (302)
T ss_pred             CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH-----HH
Confidence            34556663        6676 999998877666655554432  33455789999999999999999999985     66


Q ss_pred             hc
Q psy1025          86 VR   87 (258)
Q Consensus        86 Ik   87 (258)
                      |.
T Consensus       294 ll  295 (302)
T cd05055         294 IV  295 (302)
T ss_pred             HH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG1290|consensus

Probab=96.11  E-value=0.0044  Score=59.66  Aligned_cols=39  Identities=10%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        52 ~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      ||..-..+..|||.-+|+.+|.+|.++     .+.++|||+..+
T Consensus       518 ~s~e~A~~fsdFL~PmLef~PeKR~tA-----~~cl~hPwLn~~  556 (590)
T KOG1290|consen  518 WSEEDAQQFSDFLSPMLEFDPEKRPTA-----AQCLKHPWLNPV  556 (590)
T ss_pred             CCHHHHHHHHHHHHHHHhcCccccccH-----HHHhcCccccCC
Confidence            333344667889999999999999985     899999999865

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=96.08  E-value=0.01  Score=53.85  Aligned_cols=75  Identities=11%  Similarity=0.083  Sum_probs=56.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++..+|+        +|++ |.+||.+.+..+.+..+... ....|..++.++.+||.+||..+|.+|+
T Consensus       205 PE~~~~---~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  281 (334)
T cd05100         205 PEALFD---RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRP  281 (334)
T ss_pred             HHHhcc---CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCc
Confidence            355553   345556663        6676 89999998888888877664 3445667889999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      +.     .+|+.+
T Consensus       282 s~-----~ell~~  289 (334)
T cd05100         282 TF-----KQLVED  289 (334)
T ss_pred             CH-----HHHHHH
Confidence            75     777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=96.07  E-value=0.012  Score=50.72  Aligned_cols=66  Identities=17%  Similarity=0.200  Sum_probs=50.0

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||...+...+...+.... +..|..++..+.+|+.+||..+|.+|++.     .+|
T Consensus       178 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~i  252 (262)
T cd05058         178 KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTF-----SEL  252 (262)
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCH-----HHH
Confidence            45556663        6777 678888877777777766543 44566788999999999999999999985     666


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       253 l  253 (262)
T cd05058         253 V  253 (262)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=96.04  E-value=0.013  Score=50.89  Aligned_cols=68  Identities=15%  Similarity=0.145  Sum_probs=50.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |..||...+...+...|... ....+...+.++.+||.+|+..+|..|+.
T Consensus       180 E~~~~---~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~  256 (268)
T cd05063         180 EAIAY---RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPR  256 (268)
T ss_pred             HHhhc---CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            55553   345566663        5665 99999988887777777654 23334467899999999999999999997


Q ss_pred             C
Q psy1025          78 S   78 (258)
Q Consensus        78 ~   78 (258)
                      .
T Consensus       257 ~  257 (268)
T cd05063         257 F  257 (268)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0192|consensus

Probab=96.03  E-value=0.014  Score=54.75  Aligned_cols=70  Identities=13%  Similarity=0.134  Sum_probs=56.6

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILR--GKLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~--~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      ||+++. ...|+..+|        |+|++|+.||.+.........+..  ..+.+|....+....|+.++...||..|++
T Consensus       214 Ev~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~  292 (362)
T KOG0192|consen  214 EVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPS  292 (362)
T ss_pred             hhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCC
Confidence            778753 346788887        699999999998877666666543  356778889999999999999999999998


Q ss_pred             C
Q psy1025          78 S   78 (258)
Q Consensus        78 ~   78 (258)
                      .
T Consensus       293 f  293 (362)
T KOG0192|consen  293 F  293 (362)
T ss_pred             H
Confidence            5

>KOG0666|consensus

Probab=96.02  E-value=0.0079  Score=55.25  Aligned_cols=83  Identities=25%  Similarity=0.432  Sum_probs=57.9

Q ss_pred             cccccccCCCCCCCCceehH--------hhhcCCCCCCCCCH---------HHHHHHHHcC---------C--CCCCCC-
Q psy1025           5 RKASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR---------KKTIEKILRG---------K--LILPPY-   55 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~---------~~l~~~Il~~---------~--~~~P~~-   55 (258)
                      |--|++.|  -.-||+++|.        |||+-.|-|.+...         ....++|.+.         +  ..+|.+ 
T Consensus       206 RAPELLLG--a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q  283 (438)
T KOG0666|consen  206 RAPELLLG--ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQ  283 (438)
T ss_pred             cChHHhcc--cccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchH
Confidence            44588888  4779999993        88888887765321         1223344321         0  112211 


Q ss_pred             -------------------------CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          56 -------------------------LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        56 -------------------------~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                                               -++.+.+|+.+||+.||.+|+++     ++.++|+||..
T Consensus       284 ~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta-----~qAleh~yF~~  342 (438)
T KOG0666|consen  284 TLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA-----EQALEHPYFTE  342 (438)
T ss_pred             HHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH-----HHHhccccccc
Confidence                                     25569999999999999999996     99999999975

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=96.01  E-value=0.011  Score=51.39  Aligned_cols=59  Identities=15%  Similarity=0.200  Sum_probs=47.5

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~~~-~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |..||...+.......|...... .|...+...+++|.+||..+|.+|++.     .+|..
T Consensus       193 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~ll~  253 (256)
T cd05113         193 EVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTF-----QQLLS  253 (256)
T ss_pred             HHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence            7776 99999888888888888765433 355678999999999999999999985     66654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=96.00  E-value=0.011  Score=51.25  Aligned_cols=55  Identities=20%  Similarity=0.286  Sum_probs=43.8

Q ss_pred             HhhhcCCCCCCCCCHHHHHHHHHcCCCCC-CC-CCCHHHHHHHHHHhhcccccccCC
Q psy1025          24 NILEAVKPPFTADNRKKTIEKILRGKLIL-PP-YLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        24 ~~ml~G~pPF~~~~~~~l~~~Il~~~~~~-P~-~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |+|++|.+||...+.......+....... +. .++.++.+||.+||..||.+|++.
T Consensus       204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  260 (269)
T cd08528         204 YQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDI  260 (269)
T ss_pred             HHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCH
Confidence            38889999999888777777776554332 22 578999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=95.96  E-value=0.012  Score=51.15  Aligned_cols=67  Identities=16%  Similarity=0.217  Sum_probs=51.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++...|+        +|++ |.+||.+.+..+++..+... .+..+...+..+.+|+.+||..+|..|++.     .+|
T Consensus       191 ~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~-----~~~  265 (273)
T cd05074         191 VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSF-----QHL  265 (273)
T ss_pred             ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            45556663        6666 99999988888877777654 345566788999999999999999999974     666


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      +.
T Consensus       266 ~~  267 (273)
T cd05074         266 RD  267 (273)
T ss_pred             HH
Confidence            53

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=95.87  E-value=0.017  Score=51.42  Aligned_cols=74  Identities=9%  Similarity=0.062  Sum_probs=55.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..|+...|+        +|++ |..||.+.+..+++..+.... ...|..++.++++||.+||..+|.+|+
T Consensus       208 PE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  284 (304)
T cd05101         208 PEALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRP  284 (304)
T ss_pred             chhhcc---CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCC
Confidence            355554   346666773        5565 899999988888888876543 345667899999999999999999999


Q ss_pred             CCCCCCchhhcc
Q psy1025          77 GSGPNDGEAVRV   88 (258)
Q Consensus        77 g~~~~g~~eIk~   88 (258)
                      +.     .+|.+
T Consensus       285 s~-----~e~l~  291 (304)
T cd05101         285 TF-----KQLVE  291 (304)
T ss_pred             CH-----HHHHH
Confidence            75     66653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=95.84  E-value=0.016  Score=50.65  Aligned_cols=68  Identities=13%  Similarity=0.117  Sum_probs=46.8

Q ss_pred             CCCCceehH--------hhh-cCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          16 TAHTKAERN--------ILE-AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        16 ~gh~~~vD~--------~ml-~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      ..++..+|.        +|+ .|.+||......+. ..+...........+.++++||.+||..||.+|++.     .+|
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~-----~~i  257 (262)
T cd05077         184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFF-----RAI  257 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            456666773        555 68999987654443 233444444444456889999999999999999985     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      ..+
T Consensus       258 l~~  260 (262)
T cd05077         258 MRD  260 (262)
T ss_pred             HHh
Confidence            543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=95.84  E-value=0.014  Score=51.39  Aligned_cols=67  Identities=15%  Similarity=0.124  Sum_probs=47.9

Q ss_pred             CCCCceehH--------hh-hcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          16 TAHTKAERN--------IL-EAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        16 ~gh~~~vD~--------~m-l~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      ..++..+|.        +| +.|.+||...+..... .+......+|...+.++.+||.+||..+|.+|+++     .+|
T Consensus       196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~i  269 (274)
T cd05076         196 NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSF-----RTI  269 (274)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCCCCChHHHHHHHHHcccChhhCcCH-----HHH
Confidence            345666663        44 4799999876655442 33444556666677899999999999999999975     776


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       270 l~  271 (274)
T cd05076         270 LR  271 (274)
T ss_pred             HH
Confidence            54

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=95.82  E-value=0.014  Score=54.24  Aligned_cols=73  Identities=8%  Similarity=0.125  Sum_probs=49.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++...|+        +|++ |.+||........+.+++..  ....|...+.++++||.+||..||.+|+
T Consensus       286 E~~~~---~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  362 (375)
T cd05104         286 ESIFN---CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRP  362 (375)
T ss_pred             hHhcC---CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCc
Confidence            55553   345666663        6675 99999876544443443332  2334566789999999999999999999


Q ss_pred             CCCCCCchhhcc
Q psy1025          77 GSGPNDGEAVRV   88 (258)
Q Consensus        77 g~~~~g~~eIk~   88 (258)
                      +.     .+|.+
T Consensus       363 s~-----~eil~  369 (375)
T cd05104         363 TF-----KQIVQ  369 (375)
T ss_pred             CH-----HHHHH
Confidence            75     66653

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=95.76  E-value=0.018  Score=50.06  Aligned_cols=73  Identities=12%  Similarity=0.087  Sum_probs=52.9

Q ss_pred             cccccCCCCCCCCceehH--------hhh-cCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILE-AVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml-~G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|++.+   ..++...|+        +|+ .|.+||...+.......|... .+..|..++.++.++|.+||.++|.+|+
T Consensus       180 PE~~~~---~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (269)
T cd05065         180 PEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARP  256 (269)
T ss_pred             HhHhcc---CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCc
Confidence            355553   345556662        556 499999988887777777543 3344567888999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      +.     ++|.
T Consensus       257 ~~-----~~i~  262 (269)
T cd05065         257 KF-----GQIV  262 (269)
T ss_pred             CH-----HHHH
Confidence            75     6664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=95.72  E-value=0.023  Score=49.75  Aligned_cols=66  Identities=17%  Similarity=0.139  Sum_probs=49.9

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.......+...+... .+..+...+.+..++|.+||..||..|++.     .+|
T Consensus       187 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~l  261 (279)
T cd05109         187 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRF-----REL  261 (279)
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            45666673        6666 99999887776666656554 244456789999999999999999999985     676


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       262 ~  262 (279)
T cd05109         262 V  262 (279)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0584|consensus

Probab=95.70  E-value=0.011  Score=58.24  Aligned_cols=74  Identities=22%  Similarity=0.325  Sum_probs=59.6

Q ss_pred             CCCCceehH--------hhhcCCCCCC-CCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEAVKPPFT-ADNRKKTIEKILRGKLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~-~~~~~~l~~~Il~~~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..|.-.||.        +|+++..||. -.+...+|.++..+...  +-.--.++++.||.+||.. ...|+++     .
T Consensus       218 E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa-----~  291 (632)
T KOG0584|consen  218 ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSA-----K  291 (632)
T ss_pred             hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCH-----H
Confidence            467888883        8899999996 47889999999887421  2222368999999999997 9999985     9


Q ss_pred             hhccCCccccC
Q psy1025          85 AVRVHPFFRSI   95 (258)
Q Consensus        85 eIk~HpfF~~i   95 (258)
                      |++.|+||..-
T Consensus       292 eLL~d~Ff~~d  302 (632)
T KOG0584|consen  292 ELLKDPFFDED  302 (632)
T ss_pred             HHhhChhhccc
Confidence            99999999853

>KOG0662|consensus

Probab=95.67  E-value=0.021  Score=48.85  Aligned_cols=79  Identities=29%  Similarity=0.473  Sum_probs=58.3

Q ss_pred             cccCCCCCCCCceehH--------hhh-cCCCCCCCCCHHHHHHHHHcC-----C---------------CCCCC-----
Q psy1025           9 IVRNQKDTAHTKAERN--------ILE-AVKPPFTADNRKKTIEKILRG-----K---------------LILPP-----   54 (258)
Q Consensus         9 Ii~~~~~~gh~~~vD~--------~ml-~G~pPF~~~~~~~l~~~Il~~-----~---------------~~~P~-----   54 (258)
                      |+-|  ..-|+.++|.        ++. +|+|-|.+.+......+|...     +               +.||.     
T Consensus       172 vlfg--akly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws  249 (292)
T KOG0662|consen  172 VLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS  249 (292)
T ss_pred             eeee--eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH
Confidence            4445  3678888884        222 699999999888877777531     0               11221     


Q ss_pred             ----CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 ----YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 ----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                          .++...+||+.+||.-+|.+|+.+     ++.++||||..
T Consensus       250 qivp~lns~grdllqkll~cnp~qrisa-----eaalqhpyf~d  288 (292)
T KOG0662|consen  250 QIVPKLNSTGRDLLQKLLKCNPAQRISA-----EAALQHPYFSD  288 (292)
T ss_pred             HHhhhhcchhHHHHHHHhccCcccccCH-----HHHhcCccccc
Confidence                256778999999999999999985     89999999975

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=95.63  E-value=0.021  Score=49.65  Aligned_cols=69  Identities=14%  Similarity=0.152  Sum_probs=49.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      -|.+.+   ..++..+|.        ++++ |..||...+.......|... .+..+..++..+++|+.+||.++|..|+
T Consensus       178 pe~~~~---~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (267)
T cd05066         178 PEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERP  254 (267)
T ss_pred             HhHhcc---CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCC
Confidence            345543   345555662        5454 99999888777777777654 2333446788999999999999999999


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      +.
T Consensus       255 ~~  256 (267)
T cd05066         255 KF  256 (267)
T ss_pred             CH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PLN00181 protein SPA1-RELATED; Provisional

Probab=95.62  E-value=0.011  Score=60.48  Aligned_cols=75  Identities=15%  Similarity=0.105  Sum_probs=51.0

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|        |+|++|.+||...  ...+..+....  +|.   .-..++.+++.+||.++|.+|+
T Consensus       185 E~~~~---~~~~~~sDVwSlGviL~ELl~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~~P~~Rp  257 (793)
T PLN00181        185 EEDNG---SSSNCASDVYRLGVLLFELFCPVSSREEK--SRTMSSLRHRV--LPPQILLNWPKEASFCLWLLHPEPSCRP  257 (793)
T ss_pred             hhhcc---CCCCchhhhhhHHHHHHHHhhCCCchhhH--HHHHHHHHHhh--cChhhhhcCHHHHHHHHHhCCCChhhCc
Confidence            56664   35677777        3888999988642  22223322211  121   1245678899999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     .+|++||||..
T Consensus       258 s~-----~eil~h~~~~~  270 (793)
T PLN00181        258 SM-----SELLQSEFINE  270 (793)
T ss_pred             Ch-----HHHhhchhhhh
Confidence            85     99999999975

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=95.54  E-value=0.025  Score=49.26  Aligned_cols=59  Identities=15%  Similarity=0.163  Sum_probs=46.0

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGKLIL--PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~~~~--P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |..||...+....+..+....+.+  +..++....++|.+||..+|.+|++.     .+|+.
T Consensus       210 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-----~~~l~  271 (275)
T cd05046         210 EVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSF-----SELVS  271 (275)
T ss_pred             HHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence            4555 889998877777777777655444  45688999999999999999999874     66654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=95.46  E-value=0.027  Score=50.57  Aligned_cols=69  Identities=16%  Similarity=0.134  Sum_probs=49.8

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|+        +|++ |.+||.+.+.......+... .+..|...+.+..+||.+|+..+|.+|++.     .+
T Consensus       186 ~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~  260 (316)
T cd05108         186 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKF-----RE  260 (316)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            356666673        6665 99999887766654443332 234456678899999999999999999985     77


Q ss_pred             hccC
Q psy1025          86 VRVH   89 (258)
Q Consensus        86 Ik~H   89 (258)
                      |..+
T Consensus       261 l~~~  264 (316)
T cd05108         261 LIIE  264 (316)
T ss_pred             HHHH
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.39  E-value=0.035  Score=48.57  Aligned_cols=54  Identities=19%  Similarity=0.150  Sum_probs=45.1

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ++++ |.+||.+.+..++...+.... +..|...+.++.++|.++|..+|..|++.
T Consensus       203 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~  258 (279)
T cd05057         203 ELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTF  258 (279)
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence            6676 999999988888887777653 45566788999999999999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=95.33  E-value=0.025  Score=48.97  Aligned_cols=54  Identities=20%  Similarity=0.297  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCCCCH--HHHHHHHHcCCC-CCC-CCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEAVKPPFTADNR--KKTIEKILRGKL-ILP-PYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~G~pPF~~~~~--~~l~~~Il~~~~-~~P-~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++|..||.+...  ......+..... ..+ ..++.++++||.+||..+|.+|++.
T Consensus       198 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  255 (267)
T cd08229         198 EMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDI  255 (267)
T ss_pred             HHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCH
Confidence            88899999976543  344445544322 122 3588999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=95.26  E-value=0.031  Score=48.19  Aligned_cols=69  Identities=16%  Similarity=0.248  Sum_probs=47.8

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCC--HHHHHHHHHcCCC-CCCC-CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADN--RKKTIEKILRGKL-ILPP-YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~--~~~l~~~Il~~~~-~~P~-~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..++...|        |+|++|..||....  ...+...+..... ..|. .++.+.+++|.+||..+|.+
T Consensus       175 pE~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~  251 (267)
T cd08224         175 PERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEK  251 (267)
T ss_pred             HHHhcc---CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCccc
Confidence            355553   34555566        38889999997543  3445555554432 2344 68889999999999999999


Q ss_pred             ccCC
Q psy1025          75 RLGS   78 (258)
Q Consensus        75 RLg~   78 (258)
                      |++.
T Consensus       252 Rp~~  255 (267)
T cd08224         252 RPDI  255 (267)
T ss_pred             CCCH
Confidence            9985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=95.15  E-value=0.036  Score=48.80  Aligned_cols=66  Identities=18%  Similarity=0.190  Sum_probs=47.1

Q ss_pred             CCCceehH--------hhhc--CCCCCCCCCHHHHHHHHHcC------C--CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA--VKPPFTADNRKKTIEKILRG------K--LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~--G~pPF~~~~~~~l~~~Il~~------~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|.        +|++  |.+||...+...++..+...      .  ...|..++.++.+||.+||..||.+|++.
T Consensus       208 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~  287 (296)
T cd05051         208 KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF  287 (296)
T ss_pred             CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH
Confidence            46666773        5554  78999877766666665432      1  22344678999999999999999999985


Q ss_pred             CCCCchhhc
Q psy1025          79 GPNDGEAVR   87 (258)
Q Consensus        79 ~~~g~~eIk   87 (258)
                           .+|.
T Consensus       288 -----~el~  291 (296)
T cd05051         288 -----REIH  291 (296)
T ss_pred             -----HHHH
Confidence                 6663

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PHA02882 putative serine/threonine kinase; Provisional

Probab=95.14  E-value=0.028  Score=50.06  Aligned_cols=66  Identities=14%  Similarity=0.158  Sum_probs=45.9

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCH-HH--------HHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNR-KK--------TIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~-~~--------l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ..|+..+|+        +|++|.+||.+.+. ..        ...++...++.++ ..+.++.+++..++..+|.+|+..
T Consensus       208 ~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rp~~  286 (294)
T PHA02882        208 ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIK-NANKFIYDFIECVTKLSYEEKPDY  286 (294)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccC-CCCHHHHHHHHHHHhCCCCCCCCH
Confidence            346667773        88899999976532 21        2334444444433 457899999999999999999975


Q ss_pred             CCCCchhhc
Q psy1025          79 GPNDGEAVR   87 (258)
Q Consensus        79 ~~~g~~eIk   87 (258)
                           ++|+
T Consensus       287 -----~~l~  290 (294)
T PHA02882        287 -----DALI  290 (294)
T ss_pred             -----HHHH
Confidence                 6664

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=95.13  E-value=0.014  Score=50.85  Aligned_cols=61  Identities=25%  Similarity=0.297  Sum_probs=46.8

Q ss_pred             CCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          18 HTKAER--------NILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        18 h~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ++...|        |+|++ |..||...+...+...+.... +..|..++....+||..|+..||.+|++.
T Consensus       182 ~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~  252 (259)
T PF07714_consen  182 YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSF  252 (259)
T ss_dssp             ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--H
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCH
Confidence            555666        37888 789999888888888886543 45567789999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0668|consensus

Probab=94.91  E-value=0.024  Score=50.27  Aligned_cols=35  Identities=31%  Similarity=0.689  Sum_probs=32.4

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      +++++.|||.+||.-|-.+||++     .|.+.||||..+
T Consensus       294 ~~peaiDlldklLrYDHqeRlTa-----kEam~HpyF~~~  328 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTA-----KEAMAHPYFAPV  328 (338)
T ss_pred             CChHHHHHHHHHHhhccccccch-----HHHhcCchHHHH
Confidence            57999999999999999999996     999999999864

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.73  E-value=0.072  Score=46.78  Aligned_cols=59  Identities=14%  Similarity=0.107  Sum_probs=44.7

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |..||.+.....+.+.+.... +..|...+.+..+++.+|+..+|.+|++.     .+|.+
T Consensus       203 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~-----~el~~  263 (279)
T cd05111         203 EMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTF-----KELAN  263 (279)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence            6776 999998887776656555443 33345567889999999999999999985     67643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=94.69  E-value=0.056  Score=46.72  Aligned_cols=59  Identities=24%  Similarity=0.235  Sum_probs=41.7

Q ss_pred             hhhcCCCCCCCCC--HHHHHHHHHcCC-CCCC-CCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEAVKPPFTADN--RKKTIEKILRGK-LILP-PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~G~pPF~~~~--~~~l~~~Il~~~-~~~P-~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++|..||....  .......+.... ...+ ..++...++||.+||..+|.+|++.     .+|.+
T Consensus       198 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~vl~  260 (267)
T cd08228         198 EMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDI-----GYVHQ  260 (267)
T ss_pred             HHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCH-----HHHHH
Confidence            8889999997653  334455544322 1222 3577899999999999999999985     66653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=94.40  E-value=0.061  Score=50.75  Aligned_cols=68  Identities=15%  Similarity=0.150  Sum_probs=47.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHH-HHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTI-EKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~-~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|+        +|++ |..||........+ ..+... .+..|..++.++++||.+||..||.+|+
T Consensus       309 E~~~~---~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  385 (400)
T cd05105         309 ESIFD---NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRP  385 (400)
T ss_pred             hhhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCc
Confidence            45543   346667773        6664 99999875544433 334333 3445667899999999999999999999


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      +.
T Consensus       386 t~  387 (400)
T cd05105         386 SF  387 (400)
T ss_pred             CH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0590|consensus

Probab=94.40  E-value=0.01  Score=59.17  Aligned_cols=67  Identities=19%  Similarity=0.316  Sum_probs=47.9

Q ss_pred             hhhcCCCCCCCCCHHHH--HHH-------HHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          25 ILEAVKPPFTADNRKKT--IEK-------ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l--~~~-------Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      +|++|+.||......+.  ++.       +..+...+-..+..+++.+|.++|+.||.+|++.     ++|++-+||+.|
T Consensus       517 ~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti-----~~i~~d~W~~~i  591 (601)
T KOG0590|consen  517 CMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITI-----EQILNDEWIRSI  591 (601)
T ss_pred             EEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecH-----HHHhhChHhhhc
Confidence            88899999975433322  111       1111111223578999999999999999999984     999999999876


Q ss_pred             C
Q psy1025          96 N   96 (258)
Q Consensus        96 d   96 (258)
                      +
T Consensus       592 ~  592 (601)
T KOG0590|consen  592 E  592 (601)
T ss_pred             c
Confidence            5

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=94.22  E-value=0.061  Score=49.06  Aligned_cols=75  Identities=13%  Similarity=0.180  Sum_probs=50.4

Q ss_pred             cccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHH-HHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKK-TIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~-l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      -|++.+   ..++...|+        +|++ |..||....... ....+... .+..|..++++..+++.+||..+|.+|
T Consensus       250 PE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~R  326 (343)
T cd05103         250 PETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR  326 (343)
T ss_pred             cHHhcC---CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            344543   345566663        5664 999997654332 33333332 345566788999999999999999999


Q ss_pred             cCCCCCCchhhccC
Q psy1025          76 LGSGPNDGEAVRVH   89 (258)
Q Consensus        76 Lg~~~~g~~eIk~H   89 (258)
                      ++.     .+|.+|
T Consensus       327 ps~-----~eil~~  335 (343)
T cd05103         327 PTF-----SELVEH  335 (343)
T ss_pred             cCH-----HHHHHH
Confidence            975     787765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.19  E-value=0.09  Score=46.48  Aligned_cols=62  Identities=18%  Similarity=0.225  Sum_probs=43.9

Q ss_pred             CCCceehH--------hhhc--CCCCCCCCCHHHHHHHHHc-----CC---CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA--VKPPFTADNRKKTIEKILR-----GK---LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~--G~pPF~~~~~~~l~~~Il~-----~~---~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|+        +|++  |..||...+.......+..     ..   ...+..++..+++||.+||..||.+|++.
T Consensus       207 ~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~  286 (295)
T cd05097         207 KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF  286 (295)
T ss_pred             CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            45666773        5554  7789987776665554432     11   22345678999999999999999999985

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=94.14  E-value=0.076  Score=50.14  Aligned_cols=67  Identities=13%  Similarity=0.136  Sum_probs=48.0

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHH-HHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEK-ILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~-Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++ |.+||......+.... +..+ .+..|..++.++++||.+|+..+|.+|+..     .+
T Consensus       317 ~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-----~e  391 (401)
T cd05107         317 LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF-----SQ  391 (401)
T ss_pred             CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HH
Confidence            45566673        6676 8999987555554444 4333 345677789999999999999999999975     66


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |..
T Consensus       392 ll~  394 (401)
T cd05107         392 LVH  394 (401)
T ss_pred             HHH
Confidence            653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=93.84  E-value=0.097  Score=46.29  Aligned_cols=62  Identities=16%  Similarity=0.145  Sum_probs=43.1

Q ss_pred             CCCceehH--------hhhc--CCCCCCCCCHHHHHHHHHc--------CCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA--VKPPFTADNRKKTIEKILR--------GKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~--G~pPF~~~~~~~l~~~Il~--------~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++...|+        +|++  |..||...+..+....+..        .....|..++...++||..||..||.+|++.
T Consensus       208 ~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  287 (296)
T cd05095         208 KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF  287 (296)
T ss_pred             CccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            35666663        6665  8899987666555443321        1122345678999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4721|consensus

Probab=93.74  E-value=0.033  Score=54.98  Aligned_cols=77  Identities=12%  Similarity=0.130  Sum_probs=56.0

Q ss_pred             ccccCCCCCCCCcee-----hHhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCC
Q psy1025           8 SIVRNQKDTAHTKAE-----RNILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGP   80 (258)
Q Consensus         8 EIi~~~~~~gh~~~v-----D~~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~   80 (258)
                      |||+++......+.|     .|+||+|..||.+.+...++--+-..  .+..|.....-++-||+.++.-.|..|..+  
T Consensus       281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSF--  358 (904)
T KOG4721|consen  281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSF--  358 (904)
T ss_pred             HHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccH--
Confidence            888987555555544     37999999999876665443322222  345677888899999999999999999975  


Q ss_pred             CCchhhccC
Q psy1025          81 NDGEAVRVH   89 (258)
Q Consensus        81 ~g~~eIk~H   89 (258)
                         .+|+.|
T Consensus       359 ---rqil~H  364 (904)
T KOG4721|consen  359 ---RQILLH  364 (904)
T ss_pred             ---HHHHHH
Confidence               677666

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=93.59  E-value=0.11  Score=46.06  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=48.2

Q ss_pred             ccccCCCCCCCCceehH--------hhh--cCCCCCCCCCHHHHHHHHHc---C-----CCCCCCCCCHHHHHHHHHHhh
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILE--AVKPPFTADNRKKTIEKILR---G-----KLILPPYLTPDARELIRKLLK   69 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml--~G~pPF~~~~~~~l~~~Il~---~-----~~~~P~~~S~ea~dLI~~LL~   69 (258)
                      |++.+   ..++..+|+        +|+  ++..||...+.......+..   .     .+..|..++..+++||.+||.
T Consensus       210 E~~~~---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  286 (304)
T cd05096         210 ECILM---GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWS  286 (304)
T ss_pred             HHHhc---CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHcc
Confidence            55553   246666773        444  47789987666655544321   1     123355678999999999999


Q ss_pred             cccccccCCCCCCchhh
Q psy1025          70 RQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        70 kdP~~RLg~~~~g~~eI   86 (258)
                      .||.+|++.     ++|
T Consensus       287 ~~p~~RPs~-----~~i  298 (304)
T cd05096         287 RDCRERPSF-----SDI  298 (304)
T ss_pred             CCchhCcCH-----HHH
Confidence            999999985     676

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0577|consensus

Probab=93.45  E-value=0.13  Score=51.18  Aligned_cols=64  Identities=22%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             hhhcCCCCCCCCCHHHHHHHH-HcCCCCCCC-CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKI-LRGKLILPP-YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~I-l~~~~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      ++.-.+||...-|.-.-...| .+..+.++. .+|..++.|+..||++-|..|+++     ++++.|+|..
T Consensus       217 ELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpts-----e~ll~H~fv~  282 (948)
T KOG0577|consen  217 ELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTS-----EELLKHRFVL  282 (948)
T ss_pred             hhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcH-----HHHhhcchhc
Confidence            555578997765554444445 566677764 699999999999999999999997     9999999985

>KOG1167|consensus

Probab=93.36  E-value=0.049  Score=51.43  Aligned_cols=36  Identities=25%  Similarity=0.418  Sum_probs=31.9

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      ++..+.||+.+||..||.+|+++     ++.++||||...+
T Consensus       353 ~~~~~~dlLdk~le~np~kRitA-----EeALkHpFF~~~~  388 (418)
T KOG1167|consen  353 FPALLLDLLDKCLELNPQKRITA-----EDALKHPFFDEAD  388 (418)
T ss_pred             ccHHHHHHHHHHccCChhhcccH-----HHHhcCcCCcchh
Confidence            56689999999999999999986     9999999998443

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=92.86  E-value=0.23  Score=44.22  Aligned_cols=59  Identities=17%  Similarity=0.180  Sum_probs=43.2

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |..||.+.........+... .+..+...+..+.++|.+++..+|.+|++.     .+|..
T Consensus       203 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~-----~~l~~  263 (303)
T cd05110         203 ELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKF-----KELAA  263 (303)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            6564 89999887666655544433 233445678899999999999999999985     67654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=92.69  E-value=0.12  Score=54.14  Aligned_cols=68  Identities=12%  Similarity=0.165  Sum_probs=46.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHH-HHcCCCCCC--CCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEK-ILRGKLILP--PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~-Il~~~~~~P--~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|+        +|++|.+||...+....... .+.......  ..++....+++.+||..||.+|+
T Consensus       201 E~l~g---~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~  277 (932)
T PRK13184        201 ERLLG---VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERY  277 (932)
T ss_pred             HHhcC---CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCc
Confidence            45553   346667773        88999999987655443332 122222221  35788999999999999999998


Q ss_pred             CC
Q psy1025          77 GS   78 (258)
Q Consensus        77 g~   78 (258)
                      ++
T Consensus       278 ss  279 (932)
T PRK13184        278 SS  279 (932)
T ss_pred             CH
Confidence            75

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=92.39  E-value=0.23  Score=42.49  Aligned_cols=69  Identities=14%  Similarity=0.095  Sum_probs=43.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+. ...++...|.        +|++ |.+||...+......... .....|......+.+||.++|..+|.+|++.
T Consensus       174 E~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  251 (259)
T cd05037         174 ECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMPDCAELANLINQCWTYDPTKRPSF  251 (259)
T ss_pred             hhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCCCchHHHHHHHHHhccChhhCCCH
Confidence            455531 1256666773        6666 688897765443333222 2223333344899999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG2345|consensus

Probab=91.80  E-value=0.035  Score=49.52  Aligned_cols=60  Identities=13%  Similarity=0.161  Sum_probs=44.8

Q ss_pred             HhhhcCCCCCCCC--CHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          24 NILEAVKPPFTAD--NRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        24 ~~ml~G~pPF~~~--~~~~l~~~Il~~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      |.|+.|..||...  ....+--.|.+.++.+|.  .+|+....||+.+|++||.+|++.     .++..
T Consensus       232 Ya~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i-----~~ll~  295 (302)
T KOG2345|consen  232 YAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTI-----PELLS  295 (302)
T ss_pred             HHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCH-----HHHHH
Confidence            3888999999531  111223346677888886  489999999999999999999984     66654

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=91.68  E-value=0.33  Score=42.46  Aligned_cols=27  Identities=11%  Similarity=0.087  Sum_probs=24.0

Q ss_pred             CCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          52 LPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        52 ~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .|..++.++++||.+||..+|..|++.
T Consensus       245 ~~~~~~~~~~~li~~cl~~~p~~Rps~  271 (283)
T cd05080         245 CPKNCPQEVYILMKNCWETEAKFRPTF  271 (283)
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCCCH
Confidence            456678999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=91.58  E-value=0.46  Score=41.16  Aligned_cols=60  Identities=20%  Similarity=0.163  Sum_probs=40.3

Q ss_pred             CCceehH--------hhhc-CCCCCCCCCHHHHHHH-HHcCCCCCC-----CCCCHHHHHHHHHHhhcccccccCC
Q psy1025          18 HTKAERN--------ILEA-VKPPFTADNRKKTIEK-ILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        18 h~~~vD~--------~ml~-G~pPF~~~~~~~l~~~-Il~~~~~~P-----~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ++.++|+        +|++ |.+||...+..+.... +......++     ..++....+|+.+|+ .+|.+|++.
T Consensus       186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~  260 (269)
T cd05087         186 QTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSA  260 (269)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCH
Confidence            4667773        6664 9999987665554433 333223332     246788999999887 589999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=90.77  E-value=0.46  Score=41.09  Aligned_cols=61  Identities=11%  Similarity=0.124  Sum_probs=41.3

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHH-cCCCCC-----CCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKIL-RGKLIL-----PPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il-~~~~~~-----P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|+        +|++ |.+||......+....+. .....+     +..++...++++..|+ .||.+|++.
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~  260 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTA  260 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCH
Confidence            34556663        6676 889998776655555543 333332     3357888899988877 499999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1151|consensus

Probab=90.59  E-value=0.64  Score=44.95  Aligned_cols=65  Identities=18%  Similarity=0.445  Sum_probs=48.3

Q ss_pred             hhhcCCCCCCCCC-HHHHHH--HHHc-CCCCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADN-RKKTIE--KILR-GKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~-~~~l~~--~Il~-~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ..|.|+-||-.+- ...+++  .|++ ..+.||.  -+|.+|++||++||...-..|+.     +.++..||+|..
T Consensus       676 QClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D-----V~qLA~dpyllP  746 (775)
T KOG1151|consen  676 QCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID-----VQQLACDPYLLP  746 (775)
T ss_pred             hhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh-----HHHHccCccccc
Confidence            6678999995432 223322  2444 4578885  59999999999999988788874     689999999974

>KOG1989|consensus

Probab=90.50  E-value=0.098  Score=53.14  Aligned_cols=55  Identities=25%  Similarity=0.374  Sum_probs=44.0

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      -+++...||.....    -.|+++++.||.  ..+...++||+.||+.||.+|+.     |.+|+.
T Consensus       250 kLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPn-----I~Qv~~  306 (738)
T KOG1989|consen  250 KLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPN-----IYQVLE  306 (738)
T ss_pred             HHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCC-----HHHHHH
Confidence            33468899976422    358999999997  58999999999999999999996     466643

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=90.44  E-value=0.6  Score=40.54  Aligned_cols=60  Identities=12%  Similarity=0.166  Sum_probs=42.5

Q ss_pred             CCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-C-----CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          18 HTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-L-----ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        18 h~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~-----~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ++.++|+        +|++ |.+||...+..+.+..++... .     .++..++....++|..|+ .+|.+|++.
T Consensus       185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~  259 (268)
T cd05086         185 QTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATA  259 (268)
T ss_pred             CCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCH
Confidence            4556673        6664 688998877777777665432 2     233457889999999888 589999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=90.25  E-value=0.53  Score=41.22  Aligned_cols=33  Identities=21%  Similarity=0.223  Sum_probs=27.3

Q ss_pred             CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          51 ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        51 ~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      ..+..++.++.+||.+||..+|.+|+++     .+|..
T Consensus       246 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~  278 (284)
T cd05079         246 PRPPNCPEEVYQLMRKCWEFQPSKRTTF-----QNLIE  278 (284)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence            3455689999999999999999999985     66653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=90.23  E-value=0.44  Score=41.28  Aligned_cols=54  Identities=15%  Similarity=0.159  Sum_probs=36.6

Q ss_pred             hhhcCCCCCCCCCHHH--------------HHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEAVKPPFTADNRKK--------------TIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~--------------l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      +|++|..||.......              ....++...  ...|..++.+..+|+.+||..+|.+|++.
T Consensus       204 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  273 (284)
T cd05038         204 ELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSF  273 (284)
T ss_pred             eeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCH
Confidence            8889999986532211              112222222  23344577899999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1006|consensus

Probab=88.31  E-value=0.8  Score=41.61  Aligned_cols=62  Identities=15%  Similarity=0.265  Sum_probs=47.4

Q ss_pred             hhhcCCCCCCCCCHHHHHHH---HHcCCCC---CCC---CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEK---ILRGKLI---LPP---YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~---Il~~~~~---~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      |..+|..|+.+  ...+|+.   +..+.+.   ++.   .+|...+.+|.-+|.+|...|+..     .+++++||++
T Consensus       261 EvAtG~fPyr~--w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky-----~~Lk~~~fyr  331 (361)
T KOG1006|consen  261 EVATGNFPYRK--WDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKY-----DDLKKFPFYR  331 (361)
T ss_pred             eeecCCCCcch--HHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcch-----hhhhcCchhh
Confidence            66799999976  3334444   4455432   233   389999999999999999999986     9999999997

>KOG1035|consensus

Probab=86.31  E-value=0.76  Score=49.02  Aligned_cols=81  Identities=16%  Similarity=0.264  Sum_probs=53.1

Q ss_pred             ccccCCCCCCCCceehH-----hhhcCCCCCCCC-CHHHHHHHHHcCCCCCCCC----CCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN-----ILEAVKPPFTAD-NRKKTIEKILRGKLILPPY----LTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~-----~ml~G~pPF~~~-~~~~l~~~Il~~~~~~P~~----~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+-...-|+..+|.     +++--..||.-. .+..+..++..+.+.+|..    --+..+.+|+.||..||.+|++
T Consensus       785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPt  864 (1351)
T KOG1035|consen  785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPT  864 (1351)
T ss_pred             HHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCC
Confidence            55554322358888885     222123457533 2334555555566666532    2356688999999999999998


Q ss_pred             CCCCCchhhccCCccc
Q psy1025          78 SGPNDGEAVRVHPFFR   93 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~   93 (258)
                      +     .+++++-||.
T Consensus       865 A-----~eLL~s~llp  875 (1351)
T KOG1035|consen  865 A-----TELLNSELLP  875 (1351)
T ss_pred             H-----HHHhhccCCC
Confidence            5     9999999987

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=85.80  E-value=1.3  Score=38.59  Aligned_cols=31  Identities=13%  Similarity=0.232  Sum_probs=26.3

Q ss_pred             CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          52 LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        52 ~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      .+..++.++.+||.+||..+|.+|++.     .+|.
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~  277 (284)
T cd05081         247 APPGCPAEIYAIMKECWNNDPSQRPSF-----SELA  277 (284)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            345688999999999999999999985     6665

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0587|consensus

Probab=85.67  E-value=0.85  Score=47.09  Aligned_cols=64  Identities=20%  Similarity=0.282  Sum_probs=49.7

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcC-CCC--CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRG-KLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~-~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +|--|.||+.+--+...+..|-.. ++.  -|..++.+.-++|..+|.+|-.+|...     .++..|||..
T Consensus       220 EladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~-----~~ll~hpFi~  286 (953)
T KOG0587|consen  220 EMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPST-----EELLKHPFIT  286 (953)
T ss_pred             hhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcch-----hhhccCCccc
Confidence            777899999875554444444332 232  356789999999999999999999975     8999999997

>KOG1026|consensus

Probab=83.64  E-value=2.1  Score=43.88  Aligned_cols=70  Identities=19%  Similarity=0.170  Sum_probs=56.4

Q ss_pred             cccccccCCCCCCCCceeh--------Hhhh-cCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhccccc
Q psy1025           5 RKASIVRNQKDTAHTKAER--------NILE-AVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         5 ~~~EIi~~~~~~gh~~~vD--------~~ml-~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -.|-|+.|.    ++...|        ||+. .|+.|+++-+..++++.|..+++ .-|+..+.+..+|+..+-.+.|.+
T Consensus       673 ppEsIly~k----FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~  748 (774)
T KOG1026|consen  673 PPESILYGK----FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKR  748 (774)
T ss_pred             CHHHhhcCc----ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCccc
Confidence            455666652    444444        4555 69999999999999999998875 447789999999999999999999


Q ss_pred             ccCC
Q psy1025          75 RLGS   78 (258)
Q Consensus        75 RLg~   78 (258)
                      |+++
T Consensus       749 RPsF  752 (774)
T KOG1026|consen  749 RPSF  752 (774)
T ss_pred             CCCH
Confidence            9986

>KOG0197|consensus

Probab=82.74  E-value=3.2  Score=40.29  Aligned_cols=54  Identities=19%  Similarity=0.244  Sum_probs=47.4

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ||++ |+.|+.+-+..++...|.++ .+.-|...+.+..+|+..|-..+|.+|+++
T Consensus       396 E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF  451 (468)
T KOG0197|consen  396 ELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTF  451 (468)
T ss_pred             HHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCH
Confidence            6664 99999999999999998876 456678899999999999999999999986

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=82.60  E-value=0.53  Score=49.13  Aligned_cols=25  Identities=12%  Similarity=0.019  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      .++.+++.+|+..||.+|++.     .+|.
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~-----~evl  945 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCA-----NDVL  945 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCH-----HHHH
Confidence            356788999999999999985     6664

>KOG0193|consensus

Probab=82.28  E-value=0.68  Score=46.05  Aligned_cols=71  Identities=20%  Similarity=0.244  Sum_probs=51.6

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC------CCCHHHHHHHHHHhhccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKLILPP------YLTPDARELIRKLLKRQV   72 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~------~~S~ea~dLI~~LL~kdP   72 (258)
                      .|||+-+-.-.|+...|        |||++|..||...+...++..+-.+- -.|.      ....+.+.|+..|+..++
T Consensus       559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~-l~pd~s~~~s~~pk~mk~Ll~~C~~~~~  637 (678)
T KOG0193|consen  559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGY-LMPDLSKIRSNCPKAMKRLLSDCWKFDR  637 (678)
T ss_pred             HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccc-cCccchhhhccCHHHHHHHHHHHHhcCc
Confidence            47777554558888888        39999999999777766554444442 1222      345689999999999999


Q ss_pred             ccccCC
Q psy1025          73 AQRLGS   78 (258)
Q Consensus        73 ~~RLg~   78 (258)
                      .+|+.+
T Consensus       638 ~eRP~F  643 (678)
T KOG0193|consen  638 EERPLF  643 (678)
T ss_pred             ccCccH
Confidence            999875

>KOG4158|consensus

Probab=80.52  E-value=1.4  Score=42.14  Aligned_cols=71  Identities=23%  Similarity=0.222  Sum_probs=46.4

Q ss_pred             hhhcCCCCCCCCCHHHHHHHH-HcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKI-LRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~I-l~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      |.+...-||++.....+-.+. ... -+..|..+.+.+++|+..||++||.+|.+.  +-+..+.+-..|..-+|
T Consensus       449 EIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp--~iAANvl~LsLw~~~~~  521 (598)
T KOG4158|consen  449 EIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP--NIAANVLNLSLWRMGED  521 (598)
T ss_pred             HHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc--cHHHhHHHHHHhcCchH
Confidence            777778999974332221111 122 245678899999999999999999999974  33445554444444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-41
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-41
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-20
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-20
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-20
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-20
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-20
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		7e-20
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		7e-20
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-19
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-19
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-19
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		5e-18
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-17
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-17
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-17
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-17
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-17
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		8e-17
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-17
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-16
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-16
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-14
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-14
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-14
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-13
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-13
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-13
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-13
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-13
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-13
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-13
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-13
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-13
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-13
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-13
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-13
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-13
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-13
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-13
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-13
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-13
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-13
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-13
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-13
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-13
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-13
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-13
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-13
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-13
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-13
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-13
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-13
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-13
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-13
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-13
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-13
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-13
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-13
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-13
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-13
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-13
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-13
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-13
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-13
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-13
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-13
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-13
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-13
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-13
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-13
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-13
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-13
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-13
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		5e-13
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-13
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-13
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-13
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-13
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		6e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-13
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-12
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-12
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		7e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		8e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		9e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		9e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		9e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		9e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		9e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		9e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		9e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-08
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		9e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-07
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-07
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-07
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-06
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-04
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-04

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/108 (69%), Positives = 91/108 (84%)
Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 219 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278
Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/108 (69%), Positives = 91/108 (84%)
Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ HP
Sbjct: 219 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278
Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
           FFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 67/100 (67%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+P+A+ L+R L KR  A RLG+GP+  E ++ H F
Sbjct: 225 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP 131
           F +I+W+ +  R++ PPFKP+    +D   FD +FT +TP
Sbjct: 285 FSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEFTAKTP 324

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 209 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDESLLSE----S 143
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q    TP D  D   L E     
Sbjct: 269 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRE 328
Query: 144 ANLVFQGFTYVA 155
              +F+ F Y+A
Sbjct: 329 EQEMFEDFDYIA 340

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 8/132 (6%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDESLLSE----S 143
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q    TP D  D   L E     
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRE 323
Query: 144 ANLVFQGFTYVA 155
              +F+ F Y+A
Sbjct: 324 EQEMFEDFDYIA 335

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 207 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDE-SLLSESANL 146
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q    TP D  D   LL      
Sbjct: 267 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRT 326
Query: 147 VFQGFTYVA 155
            F  F+Y A
Sbjct: 327 HFPQFSYSA 335

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPDE-SLLSESANL 146
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q    TP D  D   LL      
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQRT 323
Query: 147 VFQGFTYVA 155
            F  F+Y A
Sbjct: 324 HFPQFSYSA 332

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 64/104 (61%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q+   +P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP 307

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 64/104 (61%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q+   +P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP 307

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 63/104 (60%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H F
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           F SINW DV+ +KL PPFKP +T E D   FD +FT Q+    P
Sbjct: 264 FLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITIXP 307

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 63/93 (67%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+ +A+ L+R L KR  A RLGSGP+  E ++ H F
Sbjct: 229 PFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVF 288
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
           + +I+W+ +  R+++PPFKP++   DD   FDT
Sbjct: 289 YSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDT 321

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE-AVRVHP 90
           PF A+N     E IL  +++ P +L  DA  +++  + +    RLGS    GE A+  HP
Sbjct: 223 PFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282
Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQ 149
           FF+ I+W+ +  R++EPPF+P +   +DVS FD  F ++ PV  P DE  L       F+
Sbjct: 283 FFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLXPIDEGHLPMINQDEFR 342
Query: 150 GFTYVAPSV 158
            F YV+P +
Sbjct: 343 NFEYVSPEL 351

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A +PPF  ++  +  + I+   +  P  L+ +A  + + L+ +  A+RLG GP     VR
Sbjct: 215 AGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVR 274
Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
            H FFR I+W  + +R+++PPFKP + G+     FD  FTR  PV   PD+ +++     
Sbjct: 275 EHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLXPPDQLVIANIDQS 333
Query: 147 VFQGFTYVAPSVL 159
            F+GF YV P  +
Sbjct: 334 DFEGFXYVNPQFV 346

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 10/135 (7%)
Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF + N  +  + IL   L L P +T  AR L+  LL++   +RLG+  +D   ++ H 
Sbjct: 237 PPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHV 295
Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-----DSPDESLLSES-- 143
           FF  INW D++++K+ PPF P+++G +D+  FD +FT + PV      +PD  L++ S  
Sbjct: 296 FFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEE-PVPNAIGKAPDSVLVTASVK 354
Query: 144 -ANLVFQGFTYVAPS 157
            A   F GF+Y  P+
Sbjct: 355 EAAEAFLGFSYAPPT 369

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+P+A+ L+R L KR  A RLG+GP+  E ++ H F
Sbjct: 225 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
Query: 92  FRSINWSDVLSRKLEPPFKP 111
           F +I+W+ +  R++ PPFKP
Sbjct: 285 FSTIDWNKLYRREIHPPFKP 304

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   N  KT EKIL  +L  PP+   D ++L+ +L+ R ++QRLG+  N  E V+ HP+
Sbjct: 202 PFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
Query: 92  FRSINWSDVLSRKLEPPFKPSL-TGEDDVSQFD 123
           F+ + W  +LSR +E P++P +  G+ D SQFD
Sbjct: 262 FKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD 294

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   +RK+T+  IL+ KL +P +L+P+A+ L+R L KR  A RLG+GP+  E ++ H F
Sbjct: 226 PFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 285
Query: 92  FRSINWSDVLSRKLEPPFKP 111
           F +I+W+ +  R++ PPFKP
Sbjct: 286 FSTIDWNKLYRREIHPPFKP 305

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H F
Sbjct: 209 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
           F  I W  V  +KL PPFKP +T E D   FD +FT Q    TP D  D
Sbjct: 269 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 317

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H F
Sbjct: 208 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
           F  I W  V  +KL PPFKP +T E D   FD +FT Q    TP D  D
Sbjct: 268 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 316

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H F
Sbjct: 210 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 269
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ----TPVDSPD 136
           F  I W  V  +KL PPFKP +T E D   FD +FT Q    TP D  D
Sbjct: 270 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDD 318

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H F
Sbjct: 348 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ 129
           F  I W  V  +KL PPFKP +T E D   FD +FT Q
Sbjct: 408 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ 445

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%)
Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H F
Sbjct: 351 PFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 410
Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFT 127
           F  I W  V  +KL PPFKP +T E D   FD +FT
Sbjct: 411 FAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFT 446

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A + PF  ++  +  + I+   +  P  ++ +A  + + L+ +   +RLG GP     ++
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596
Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
            H FFR I+W  +  ++++PP+KP  +G  +   FD  FTR  PV   PD+ ++      
Sbjct: 597 EHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRFFTRHPPVLXPPDQEVIRNIDQS 655
Query: 147 VFQGFTYVAPSVLE 160
            F+GF +V    L+
Sbjct: 656 EFEGFXFVNSEFLK 669

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 32  PFTADNRKKTIEKILRGKL-ILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           PFT D  K +  +I R  L   PPY   ++  A++LI++LL +   +RLG GP D + ++
Sbjct: 261 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK 320
Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQF 122
            H FF+ INW D+ ++K+  PFKP +  E DVS F
Sbjct: 321 EHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 28  AVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           A + PF  ++  +  + I+   +  P  ++ +A  + + L+ +   +RLG GP     ++
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275
Query: 88  VHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV-DSPDESLLSESANL 146
            H FFR I+W  +  ++++PP+KP   G  +   FD  FTR  PV   PD+ ++      
Sbjct: 276 EHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLXPPDQEVIRNIDQS 334
Query: 147 VFQGFTYVAPSVLE 160
            F+GF +V    L+
Sbjct: 335 EFEGFXFVNSEFLK 348

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 252 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 349

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 321

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 224 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 321

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 231 MAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 226 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 285
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 286 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 323

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 218 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 277
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 278 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 315

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+ PN    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S  D
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNAD 328

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 26  LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
           + A + PF    ++DN  +  E      IL  ++ +P  L+  A  +++  L +   +RL
Sbjct: 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 305
Query: 77  GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           G  P  G A ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD++FT +     P
Sbjct: 306 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 365
Query: 136 -DESLLSESANLVFQGFTYVAPSVL 159
            D+ ++ +     F+GF Y+ P ++
Sbjct: 366 DDDDIVRKIDQSEFEGFEYINPLLM 390

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 26  LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
           + A + PF    ++DN  +  E      IL  ++ +P  L+  A  +++  L +   +RL
Sbjct: 199 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 258
Query: 77  GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           G  P  G A ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD++FT +     P
Sbjct: 259 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 318
Query: 136 -DESLLSESANLVFQGFTYVAPSVL 159
            D+ ++ +     F+GF Y+ P ++
Sbjct: 319 DDDDIVRKIDQSEFEGFEYINPLLM 343

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    
Sbjct: 232 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           +  H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 292 IXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 329

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 26  LEAVKPPF----TADNRKKTIEK-----ILRGKLILPPYLTPDARELIRKLLKRQVAQRL 76
           + A + PF    ++DN  +  E      IL  ++ +P  L+  A  +++  L +   +RL
Sbjct: 203 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERL 262
Query: 77  GSGPNDGEA-VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP 135
           G  P  G A ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD++FT +     P
Sbjct: 263 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLXP 322
Query: 136 -DESLLSESANLVFQGFTYVAP 156
            D+ ++ +     F+GF Y+ P
Sbjct: 323 DDDDIVRKIDQSEFEGFEYINP 344

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 45  ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA-VRVHPFFRSINWSDVLSR 103
           IL  ++ +P  ++  A  +++  L +   +RLG  P  G A ++ HPFFR+++W  +  +
Sbjct: 242 ILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQK 301
Query: 104 KLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQGFTYVAPSVL 159
           ++ PPFKP+++GE  +  FD++FT +     P D+ ++ +     F+GF Y+ P ++
Sbjct: 302 QVVPPFKPNISGEFGLDNFDSQFTNERVQLXPDDDDIVRKIDQSEFEGFEYINPLLM 358

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  +    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  +    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  +    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  +    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  +    
Sbjct: 217 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 276
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 277 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 314

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + A  PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +  G+  N    
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVND 290
Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
           ++ H +F + +W  +  RK+E PF P   G  D S FD
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++    I       P +L  +A++L+ KL  R+  +RLG   +    +R H
Sbjct: 215 QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQH 270
Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
           P FR INW ++  ++++PPF+P +    D S FD +F  + P +   D +L++     +F
Sbjct: 271 PLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMF 330
Query: 149 QGFTYVAPSV 158
           + F ++ P +
Sbjct: 331 RNFXFMNPGM 340

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++    I       P +L  +A++L+ KL  R+  +RLG   +    +R H
Sbjct: 216 QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQH 271
Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP-VDSPDESLLSESANLVF 148
           P FR INW ++  ++++PPF+P +    D S FD +F  + P +   D +L++     +F
Sbjct: 272 PLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLXFADRALINSMDQNMF 331
Query: 149 QGFTYVAPSV 158
           + F ++ P +
Sbjct: 332 RNFXFMNPGM 341

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ R L+  LL+R V +RLG      + V+  PFFRS++W  V  +K  PP  P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTY-VAPSVLEEMHHD 165
               +   D  D+  FD + T+   +   D+ L       + + +   VA +V + ++ +
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAE 532
Query: 166 KPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFL 218
             R+      RK+T   N  L     + L +   M G        S  G+PFL
Sbjct: 533 TDRL----EARKKTK--NKQLGHEEDYALGKDCIMHG------YMSKMGNPFL 573

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ R L+  LL+R V +RLG      + V+  PFFRS++W  V  +K  PP  P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTY-VAPSVLEEMHHD 165
               +   D  D+  FD + T+   +   D+ L       + + +   VA +V + ++ +
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTINAE 532
Query: 166 KPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGHHVDQQRSGGGDPFL 218
             R+      RK+T   N  L     + L +   M G        S  G+PFL
Sbjct: 533 TDRL----EARKKTK--NKQLGHEEDYALGKDCIMHG------YMSKMGNPFL 573

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ R L+  LL+R V +RLG      + V+  PFFRS++W  V  +K  PP  P
Sbjct: 413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESL 139
               +   D  D+  FD + T+   +   D+ L
Sbjct: 473 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 505

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           LP   +P+ R L+  LL+R V +RLG      + V+  PFFRS++W  V  +K  PP  P
Sbjct: 412 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471
Query: 112 ---SLTGED--DVSQFDTKFTRQTPVDSPDESL 139
               +   D  D+  FD + T+   +   D+ L
Sbjct: 472 PRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 504

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 230 LVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYG 289
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 290 PLKAHPFFESVTWENL 305

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 224 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 284 PLKAHPFFESVTWENL 299

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 224 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 284 PLKAHPFFESVTWENL 299

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 232 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 291
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 292 PLKAHPFFESVTWENL 307

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 209 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 268
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 269 PLKAHPFFESVTWENL 284

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 228 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 288 PLKAHPFFESVTWENL 303

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 225 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 285 PLKAHPFFESVTWENL 300

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 228 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 288 PLKAHPFFESVTWENL 303

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 202 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 261
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 262 PLKAHPFFESVTWENL 277

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 203 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 262
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 263 PLKAHPFFESVTWENL 278

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 204 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 263
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 264 PLKAHPFFESVTWENL 279

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 205 LVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 264
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 265 PLKAHPFFESVTWENL 280

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 30  KPPFTADNRKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLGS-GPNDGEAV 86
           + PF A++  +T  KI+    +   P ++T D  E  + L++R +  R    G N  E  
Sbjct: 294 ETPFYAESLVETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDF 352
Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSESA 144
           + H FF  +NW ++  R LE P+ P ++   D S FD      R T +  P         
Sbjct: 353 KKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGL 410
Query: 145 NLVFQGFTYVAPSVLEE 161
           +L F GFT+   S   +
Sbjct: 411 HLPFIGFTFTTESCFSD 427

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 30  KPPFTADNRKKTIEKIL--RGKLILPPYLT---PDARELIRKLLKRQVAQRLGSGPNDGE 84
           + PF A++  +T  KI+  + +   P  +T    +A++LIR+L+  +   RLG   N  E
Sbjct: 278 ETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLGQ--NGIE 334
Query: 85  AVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSE 142
             + HPFF  I+W ++  R  E P+ P ++   D S FD      + +    P       
Sbjct: 335 DFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFS 392
Query: 143 SANLVFQGFTYVAPSVLEE 161
             +L F GFTY +  VL +
Sbjct: 393 GHHLPFVGFTYTSSCVLSD 411

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 30  KPPFTADNRKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLGS-GPNDGEAV 86
           + PF A++  +T  KI+    +   P ++T D  E  + L++R +  R    G N  E  
Sbjct: 278 ETPFYAESLVETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDF 336
Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT--KFTRQTPVDSPDESLLSESA 144
           + H FF  +NW ++  R LE P+ P ++   D S FD      R T +  P         
Sbjct: 337 KKHAFFEGLNWENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGL 394
Query: 145 NLVFQGFTYVAPSVLEE 161
           +L F GFT+   S   +
Sbjct: 395 HLPFIGFTFTTESCFSD 411

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N      KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 26  LEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           L A  PPF A N      KI++ +   P    P AR+L+ KLL     +RLG    +G  
Sbjct: 227 LVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
Query: 86  -VRVHPFFRSINWSDV 100
            ++ HPFF S+ W ++
Sbjct: 287 PLKAHPFFESVTWENL 302

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 56  LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP---S 112
            +P AR L  +LL +  A+RLG        V+ HP F+ +N+  + +  LEPPFKP   +
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQA 471
Query: 113 LTGED--DVSQFDT 124
           +  +D  D+ QF T
Sbjct: 472 IYCKDVLDIEQFST 485

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 56  LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP---S 112
            +P AR L  +LL +  A+RLG        V+ HP F+ +N+  + +  LEPPFKP   +
Sbjct: 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQA 471
Query: 113 LTGED--DVSQFDT 124
           +  +D  D+ QF T
Sbjct: 472 IYCKDVLDIEQFST 485

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28  AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           A + PF A   K    +  +++L   +  P   +P +++    LL++   +RLG      
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           + +R HP FR I+W  + +  L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28  AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           A + PF A   K    +  +++L   +  P   +P +++    LL++   +RLG      
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           + +R HP FR I+W  + +  L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28  AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           A + PF A   K    +  +++L   +  P   +P +++    LL++   +RLG      
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           + +R HP FR I+W  + +  L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28  AVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           A + PF A   K    +  +++L   +  P   +P +++    LL++   +RLG      
Sbjct: 384 AARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKP 111
           + +R HP FR I+W  + +  L PPF P
Sbjct: 444 DGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 30  KPPFTADNRKKTIEKILRGK--LILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGE 84
           + PF AD+  +T  KI+  K  L LP     +  +AR+ I++LL      RLG G   G+
Sbjct: 267 QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPP-ETRLGRG-GAGD 324
Query: 85  AVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE-- 142
             R HPFF  ++W  +  R   PPF P   G  D   FD      T + S     LS+  
Sbjct: 325 -FRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIR 381
Query: 143 -----SANLVFQGFTY 153
                  +L F G++Y
Sbjct: 382 EGAPLGVHLPFVGYSY 397

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           +PPF  D  K T+ K++     +P +L+ +A++LI +LL+R  A RL        +V  H
Sbjct: 209 RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSL-----SSVLDH 263
Query: 90  PFF 92
           PF 
Sbjct: 264 PFM 266

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 32  PFTADNRKKTIEKIL--RGKLILP--PYLTPDARELIRKLL-KRQVAQRLGSGPNDGEAV 86
           PF AD+   T  KI+  +  L  P    ++  A+ LI   L  R+V  RLG   N  E +
Sbjct: 278 PFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREV--RLGR--NGVEEI 333
Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
           + HPFF++  W+    R+   P  P L+ + D S FD     +  V++           L
Sbjct: 334 KQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQL 393
Query: 147 VFQGFTY 153
            F GFTY
Sbjct: 394 PFIGFTY 400

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR 75
           KPPF A+  ++T ++I R +   P ++T  AR+LI +LLK   +QR
Sbjct: 208 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 253

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-59
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-56
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-55
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	7e-54
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-12
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-53
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-53
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-53
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-52
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-51
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-49
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-48
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-47
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-46
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-44
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-43
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-43
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-43
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-40
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-39
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-37
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-31
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-07
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-28
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-16
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-14
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-08
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-07
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-07
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-07
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	9e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-04

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  190 bits (485), Expect = 3e-59
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF  ++  +  + I+   +  P  ++ +A  + + L+ +   +RLG GP     ++ H
Sbjct: 218 QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
            FFR I+W  +  ++++PP+KP   G  +   FD  FTR  PV +P D+ ++       F
Sbjct: 278 AFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEF 336

Query: 149 QGFTYVAPSVLEEMHH 164
           +GF++V    L+    
Sbjct: 337 EGFSFVNSEFLKPEVK 352

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
          +K+L+K  ++++  D   T  E+ +L    KPPF
Sbjct: 50 VKILKKDVVIQD-DDVECTMVEKRVLALPGKPPF 82

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  183 bits (468), Expect = 1e-56
 Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 2/131 (1%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE-AVRV 88
             PF A+N     E IL  +++ P +L  DA  +++  + +    RLGS    GE A+  
Sbjct: 221 HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280

Query: 89  HPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLV 147
           HPFF+ I+W+ +  R++EPPF+P +   +DVS FD  F ++ PV +P DE  L       
Sbjct: 281 HPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDE 340

Query: 148 FQGFTYVAPSV 158
           F+ F YV+P +
Sbjct: 341 FRNFEYVSPEL 351

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 48.8 bits (117), Expect = 6e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAV-KPPF 33
          +KVL+K  I+++  D   T  E+ IL      PF
Sbjct: 53 VKVLKKDVILQD-DDVECTMTEKRILSLARNHPF 85

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  179 bits (457), Expect = 3e-55
 Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE--------SLLS 141
            FF SINW DV+ +KL PPFKP +T E D   FD +FT Q+   +P +         L  
Sbjct: 262 RFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQ 321

Query: 142 ESANLVFQGFTYVA 155
                +F+ F Y+A
Sbjct: 322 REEQEMFEDFDYIA 335

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MK+LRK  I+    + AHT  E  +L+  + PF
Sbjct: 35 MKILRKEVIIAK-DEVAHTVTESRVLQNTRHPF 66

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  175 bits (447), Expect = 7e-54
 Identities = 75/109 (68%), Positives = 91/109 (83%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
            PPFT +NRKKTI+KIL+ KL LPPYLT +AR+L++KLLKR  A RLG+GP D   V+ H
Sbjct: 218 APPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
           PFFR INW ++L+RK+EPPFKP L  E+DVSQFD+KFTRQTPVDSPD+S
Sbjct: 278 PFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDS 326

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 63.7 bits (156), Expect = 4e-12
 Identities = 28/33 (84%), Positives = 29/33 (87%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MKVL+KA IVRN KDTAHTKAERNILE VK PF
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  182 bits (464), Expect = 1e-53
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF  ++  +  + I+   +  P  ++ +A  + + L+ +   +RLG GP     ++ H
Sbjct: 539 QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
            FFR I+W  +  ++++PP+KP  +G  +   FD  FTR  PV +P D+ ++       F
Sbjct: 599 AFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEF 657

Query: 149 QGFTYVAPSVLEEMHH 164
           +GF++V    L+    
Sbjct: 658 EGFSFVNSEFLKPEVK 673

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
           +K+L+K  ++++  D   T  E+ +L    KPPF
Sbjct: 371 VKILKKDVVIQD-DDVECTMVEKRVLALPGKPPF 403

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  176 bits (449), Expect = 2e-53
 Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 30  KPPFT---------ADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGP 80
           + PF           +      + IL  ++ +P  L+  A  +++  L +   +RLG  P
Sbjct: 250 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 309

Query: 81  NDG-EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DES 138
             G   ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD++FT +    +P D+ 
Sbjct: 310 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDD 369

Query: 139 LLSESANLVFQGFTYVAPSVLEE 161
           ++ +     F+GF Y+ P ++  
Sbjct: 370 IVRKIDQSEFEGFEYINPLLMSA 392

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
           M+V++K  +  + +D    + E+++ E A   PF
Sbjct: 82  MRVVKKELVNDD-EDIDWVQTEKHVFEQASNHPF 114

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  173 bits (442), Expect = 6e-53
 Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
            PF   + ++    I       P +L  +A++L+ KL  R+  +RLG   +    +R HP
Sbjct: 216 SPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD----IRQHP 271

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVFQ 149
            FR INW ++  ++++PPF+P +    D S FD +F  + P  S  D +L++     +F+
Sbjct: 272 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFR 331

Query: 150 GFTYVAPSVLE 160
            F+++ P +  
Sbjct: 332 NFSFMNPGMER 342

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
          +K L+K  ++ +  D   T  E+ +L  A + PF
Sbjct: 47 IKALKKDVVLMD-DDVECTMVEKRVLSLAWEHPF 79

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  171 bits (435), Expect = 8e-52
 Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 30  KPPFT---------ADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGP 80
           + PF           +      + IL  ++ +P  L+  A  +++  L +   +RLG  P
Sbjct: 207 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP 266

Query: 81  NDG-EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DES 138
             G   ++ HPFFR+++W  +  +++ PPFKP+++GE  +  FD++FT +    +P D+ 
Sbjct: 267 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDD 326

Query: 139 LLSESANLVFQGFTYVAP 156
           ++ +     F+GF Y+ P
Sbjct: 327 IVRKIDQSEFEGFEYINP 344

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILE-AVKPPF 33
          MKV++K  +  + +D    + E+++ E A   PF
Sbjct: 39 MKVVKKELVNDD-EDIDWVQTEKHVFEQASNHPF 71

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  171 bits (436), Expect = 1e-51
 Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
            PPF + N  +  + IL   L L P +T  AR L+  LL++   +RLG+  +D   ++ H
Sbjct: 236 LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGA-KDDFMEIKSH 294

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-------DESLLSE 142
            FF  INW D++++K+ PPF P+++G +D+  FD +FT +   ++          +   +
Sbjct: 295 VFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDSVLVTASVK 354

Query: 143 SANLVFQGFTYVAPS 157
            A   F GF+Y  P+
Sbjct: 355 EAAEAFLGFSYAPPT 369

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNIL-EAVKPPF 33
           +KVL+K +I++  K+  H  +ERN+L + VK PF
Sbjct: 68  VKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPF 100

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  166 bits (421), Expect = 5e-49
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 31  PPFTADNRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
            PF A++  +T  KI+  K           ++ +A++LIR+L+  +   RLG   N  E 
Sbjct: 279 TPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLGQ--NGIED 335

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDS--PDESLLSES 143
            + HPFF  I+W ++  R  E P+ P ++   D S FD         ++  P        
Sbjct: 336 FKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSG 393

Query: 144 ANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHH 192
            +L F GFTY +  VL +           R     TS+ N Y + HHHH
Sbjct: 394 HHLPFVGFTYTSSCVLSDRSC-------LRVTAGPTSAENLYFQSHHHH 435

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
           MK+L K  +++ + +TA  + ER++L      +
Sbjct: 104 MKILNKWEMLK-RAETACFREERDVLVNGDSKW 135

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  162 bits (412), Expect = 1e-48
 Identities = 43/102 (42%), Positives = 67/102 (65%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
             PF   +RK+T+  IL+ KL +P +L+P+A+ L+R L KR  A RLG+GP+  E ++ H
Sbjct: 223 TLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTP 131
            FF +I+W+ +  R++ PPFKP+    +D   FD +FT +TP
Sbjct: 283 SFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEFTAKTP 324

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 57.2 bits (139), Expect = 9e-10
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MKVL+KA++    +D   TK ER+IL  V  PF
Sbjct: 57 MKVLKKATLK--VRDRVRTKMERDILVEVNHPF 87

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  165 bits (418), Expect = 5e-47
 Identities = 42/190 (22%), Positives = 68/190 (35%), Gaps = 28/190 (14%)

Query: 30  KPPFTADNRKKTIE---KILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
             PF     K   E     L   + LP   +P+ R L+  LL+R V +RLG      + V
Sbjct: 388 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSL-----TGEDDVSQFDTKFTRQTPVDSPDESLLS 141
           +  PFFRS++W  V  +K  PP  P           D+  FD + T+   +   D+ L  
Sbjct: 448 KESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL-- 505

Query: 142 ESANLVFQGFTYVAPSVLEE--------MHHDKPRIVKARSPRKETSSYNYYLKPHH--- 190
                 ++ F        ++          + +   ++AR   K     +          
Sbjct: 506 ------YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYALGKDC 559

Query: 191 -HHGLPQQSG 199
             HG   + G
Sbjct: 560 IMHGYMSKMG 569

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 4/36 (11%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVK---PPF 33
           MK L K  I    +       ER +L  V     PF
Sbjct: 219 MKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPF 253

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  157 bits (399), Expect = 5e-46
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 7/135 (5%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            PF AD+   T  KI+  K  L       ++ +A+ LI   L  +   RLG   N  E +
Sbjct: 271 TPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR-EVRLGR--NGVEEI 327

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
           + H FF++  W+    R    P  P L+ + D S FD     +   ++           L
Sbjct: 328 KRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQL 387

Query: 147 VFQGFTYVAPSVLEE 161
            F GFTY +      
Sbjct: 388 PFVGFTYYSNRRYLS 402

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
           MK+L K  +++ + D+A    ER+I+     P+
Sbjct: 99  MKLLSKFEMIK-RSDSAFFWEERDIMAFANSPW 130

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  151 bits (384), Expect = 2e-44
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
           PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    ++ H 
Sbjct: 236 PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295

Query: 91  FFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG 150
           +F + +W  +  RK+E PF P   G  D S FD  +  +    S +E    E     F  
Sbjct: 296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEEIRVSINEKCGKE-----FTE 349

Query: 151 F 151
           F
Sbjct: 350 F 350

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
           MK+L K  +V+  K   HT  E+ IL+AV  PF
Sbjct: 71  MKILDKQKVVK-LKQIEHTLNEKRILQAVNFPF 102

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  151 bits (383), Expect = 1e-43
 Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 31  PPFTADNRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
            PF AD+  +T  KI+  K  L        +  +AR+ I++LL      RLG G      
Sbjct: 268 TPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPP-ETRLGRG--GAGD 324

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSE--- 142
            R HPFF  ++W  +  R   PPF P   G  D   FD      T + S     LS+   
Sbjct: 325 FRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIRE 382

Query: 143 ----SANLVFQGFTYVAPSVLEE 161
                 +L F G++Y   ++ + 
Sbjct: 383 GAPLGVHLPFVGYSYSCMALRDS 405

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 6/33 (18%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
           MK++ K  +++ + + +  + ER++L      +
Sbjct: 91  MKIMNKWDMLK-RGEVSCFREERDVLVNGDRRW 122

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  152 bits (385), Expect = 1e-43
 Identities = 41/100 (41%), Positives = 55/100 (55%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + +K  E IL  ++  P  L P+A+ L+  LLK+   QRLG G  D + +  H
Sbjct: 346 RLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ 129
            FF  I W  V  +KL PPFKP +T E D   FD +FT Q
Sbjct: 406 RFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ 445

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
           MK+L+K  IV    + AHT  E  +L+  + PF
Sbjct: 178 MKILKKEVIVAK-DEVAHTLTENRVLQNSRHPF 209

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  148 bits (377), Expect = 2e-43
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHP 90
            PF   N  KT EKIL  +L  PP+   D ++L+ +L+ R ++QRLG+  N  E V+ HP
Sbjct: 201 TPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260

Query: 91  FFRSINWSDVLSRKLEPPFKPSLT-GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
           +F+ + W  +LSR +E P++P +  G+ D SQFD K+  +            +    +F+
Sbjct: 261 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD-KYPEEDINYGVQ---GEDPYADLFR 316

Query: 150 GF 151
            F
Sbjct: 317 DF 318

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MKVL+K  +VR  K   HT  ER +L  V  PF
Sbjct: 36 MKVLKKEIVVR-LKQVEHTNDERLMLSIVTHPF 67

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  144 bits (366), Expect = 4e-40
 Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 15/141 (10%)

Query: 30  KPPFTADNRKKTIEK----ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + PF    +K   E+    +           +P AR L  +LL +  A+RLG        
Sbjct: 382 QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGED--DVSQFDTKFTRQTPVDSPDESLLSES 143
           V+ HP F+ +N+  + +  LEPPFKP        DV   +   T +     P +      
Sbjct: 442 VKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD------ 495

Query: 144 ANLVFQGFTYVAPSV--LEEM 162
               +Q F   +  +    EM
Sbjct: 496 -QDFYQKFATGSVPIPWQNEM 515

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
            K L K  I +  K  A    E+ ILE V   F
Sbjct: 214 CKKLEKKRIKKR-KGEAMALNEKQILEKVNSRF 245

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  137 bits (347), Expect = 7e-39
 Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 30  KPPFTADNRKKT----IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PFT D  K +      +IL+ +   P  ++  A++LI++LL +   +RLG GP D + 
Sbjct: 259 ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE 318

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQF 122
           ++ H FF+ INW D+ ++K+  PFKP +  E DVS F
Sbjct: 319 IKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAV-KPPF 33
           MKVL+KA+IV+  K T HT+ ER +LE + + PF
Sbjct: 87  MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  137 bits (347), Expect = 1e-37
 Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 23/172 (13%)

Query: 30  KPPFTADNRKKTIE----KILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           + PF A   K   +    ++L   +  P   +P +++    LL++   +RLG      + 
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG 445

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTG-----EDDVSQFDTKFTRQTPVDSPDESLL 140
           +R HP FR I+W  + +  L PPF P           DV  F T   +    +  D    
Sbjct: 446 LRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV--KGVAFEKADTEF- 502

Query: 141 SESANLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHH 192
                  FQ F      +  +    +  +    +  +     +     HHHH
Sbjct: 503 -------FQEFASGTCPIPWQEEMIETGVFGDLNVWRP----DGVDHHHHHH 543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 1/33 (3%)

Query: 1   MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
            K L K  + +  K       E+ IL  V   F
Sbjct: 215 CKKLNKKRLKKR-KGYQGAMVEKKILAKVHSRF 246

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  116 bits (293), Expect = 8e-31
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 24/169 (14%)

Query: 30  KPPF---TADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           + P+   ++ + K+ +       +  P   + +   L++KLL+    QR          V
Sbjct: 214 RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS----QLSDV 269

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV--DSPDESLLSESA 144
           +  P+   INW  V  ++L P F P+          D  F  +  +    P        A
Sbjct: 270 QNFPYMNDINWDAVFQKRLIPGFIPNK----GRLNCDPTFELEEMILESKPLHKKKKRLA 325

Query: 145 --NLVFQGFTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHH 191
                 +        +L+E            S +KE   +N        
Sbjct: 326 KKEKDMRKCDSSQTCLLQEHL---------DSVQKEFIIFNREKVNRDF 365

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          MK + K   V  + +  +   E  I++ ++ PF
Sbjct: 45 MKYMNKQKCVE-RNEVRNVFKELQIMQGLEHPF 76

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  109 bits (274), Expect = 2e-28
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG-EAVRV 88
            PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG    +G   ++ 
Sbjct: 229 LPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 288

Query: 89  HPFFRSINWSDVLSRKLEPPFK 110
           HPFF S+ W ++  +   P   
Sbjct: 289 HPFFESVTWENLHQQTP-PKLT 309

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 1  MKVLRKASIVRNQKDTAHTKAERNILEAVKPPF 33
          +K+L K  I++ +    +   ER+++  +  PF
Sbjct: 60 IKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 74.6 bits (184), Expect = 6e-16
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
            PPF + +  +T  +I+   L  PP+L+  +++LI KLL+    QRL       + V  H
Sbjct: 209 MPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPL-----KGVMEH 263

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGE 116
           P+ +        SR++ PP   S   +
Sbjct: 264 PWVK------ANSRRVLPPVYQSTQSK 284

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF A+  ++T ++I R +   P ++T  AR+LI +LLK   +QR          V  H
Sbjct: 204 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML-----REVLEH 258

Query: 90  PFFRSINWSDVLSRKLEPPFK 110
           P+  + +      +  E   K
Sbjct: 259 PWITANSSKPSNCQNKESASK 279

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 60.2 bits (147), Expect = 5e-11
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           +PPF  D  K T+ K++     +P +L+ +A++LI +LL+R  A RL        +V  H
Sbjct: 209 RPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSL-----SSVLDH 263

Query: 90  PFFR 93
           PF  
Sbjct: 264 PFMS 267

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF     K+T  +I + +  +P ++ P A  LI+K+L+     R          +   
Sbjct: 212 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLND 266

Query: 90  PFFRS 94
            FF S
Sbjct: 267 EFFTS 271

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 25/103 (24%)

Query: 30  KPPFTAD-NRKKTIEKILRGKLILP-------------------PYLTPDARELIRKLLK 69
             PF+   +  +    I    +  P                    +L+ +  + ++  L+
Sbjct: 249 VVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308

Query: 70  RQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS 112
           +  A+R+ S     E    H +    N  D+     E   K  
Sbjct: 309 KNPAERITS-----EDALKHEWLADTNIEDLREFSKELYKKRK 346

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF     K+T  +I + +  +P ++ P A  LI+K+L+     R          +   
Sbjct: 238 KPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP-----TINELLND 292

Query: 90  PFFRS 94
            FF S
Sbjct: 293 EFFTS 297

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPYL----TPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           P  T   R   ++K+    +  PP          +++IR L+     +R    P     +
Sbjct: 227 PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKR----PGARTLL 282

Query: 87  RVHPFFRSINWSDVLSRKLE 106
               +    +  +V+   L+
Sbjct: 283 N-SGWLPVKHQDEVIKEALK 301

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PF   N   TI ++L  KL         L+P AR+L+  LL R V +R  +       
Sbjct: 273 AVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA-----MR 327

Query: 86  VRVHPFFR 93
              HP+  
Sbjct: 328 ALQHPWIS 335

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 18/118 (15%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
             P T D      E I R    +P       R L+   L+     RL             
Sbjct: 314 DLPNTDDAALGGSEWIFRSCKNIPQP----VRALLEGFLRYPKEDRLLP-----LQAMET 364

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLV 147
           P +  +       R       P    + + ++        T    PDE+  +E+   +
Sbjct: 365 PEYEQL-------RTELSAALPLYQTDGEPTREGGAPPSGTS--QPDEAGAAEAVTAI 413

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF   N K+  E++LRGK  +P Y++ D   L+++ L     +R        E +    +
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL-----EQIMKDRW 267

Query: 92  FRSINWSDVLSRKLEPPFKPS 112
             + +  D L   +EP    S
Sbjct: 268 INAGHEEDELKPFVEPELDIS 288

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 10/93 (10%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  DN  K  E I +G   +P    P   +L++ +L+ + A+R          +R H +
Sbjct: 212 PFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSI-----RQIRQHSW 266

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDT 124
           FR             P   P      D  +  T
Sbjct: 267 FRK-----KHPPAEAPVPIPPSPDTKDRWRSMT 294

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 12/66 (18%), Positives = 17/66 (25%), Gaps = 9/66 (13%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
             P T D      E I R        +    R L+   L+     RL             
Sbjct: 310 DLPITKDAALGGSEWIFRS----CKNIPQPVRALLEGFLRYPKEDRLLP-----LQAMET 360

Query: 90  PFFRSI 95
           P +  +
Sbjct: 361 PEYEQL 366

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 51.4 bits (124), Expect = 5e-08
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF+A    + + KI  G    P      ++P A  LIR+LL +   QR+ S        
Sbjct: 205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS-----LQA 259

Query: 87  RVHPFFRS 94
             H +F  
Sbjct: 260 LEHEWFEK 267

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 31  PPFTADNRKKTIEKILRGKLILPPY---LTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
            PFT  + ++  +K    +         LTP A +L++++L +   +R  +       V 
Sbjct: 223 LPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSA-----AQVL 277

Query: 88  VHPFFR 93
            H +F+
Sbjct: 278 HHEWFK 283

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 9/74 (12%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF    +   +  I+ G            +   ++L+ + L  Q  +R  +     E  
Sbjct: 227 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----EEA 281

Query: 87  RVHPFFRSINWSDV 100
             HPFF+     +V
Sbjct: 282 LAHPFFQQYVVEEV 295

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 6e-08
 Identities = 51/326 (15%), Positives = 87/326 (26%), Gaps = 100/326 (30%)

Query: 9   IVRNQKDTAHTKA------------ERNILEAVKPPFTADNRKKTIEKILRGKLILPPYL 56
           ++ N ++     A             + + + +    T      +++            L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT---THISLDHHSMT-------L 298

Query: 57  TPD-ARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI-------------NWSDVLS 102
           TPD  + L+ K L  +  Q L   P   E +  +P   SI             NW  V  
Sbjct: 299 TPDEVKSLLLKYLDCRP-QDL---PR--EVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 103 RKLEPPFKPSLTGED---------DVSQF--DTKFTRQT-------PVDSPDESLLSESA 144
            KL    + SL   +          +S F                  + S    ++++  
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412

Query: 145 N--LVFQG---FTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSG 199
              LV +     T   PS+  E+             R     YN          +P    
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALH--RSIVDHYNIPKTFDSDDLIPPY-- 468

Query: 200 MSG------GHHVDQQRSGGGDP----------FL---VCSGGGIPAGASSP-------- 232
           +        GHH+                    FL   +         AS          
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH-DSTAWNASGSILNTLQQL 527

Query: 233 -FYRA--TTNNHRVHRTLNTELKYSP 255
            FY+     N+ +  R +N  L + P
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLP 553

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 4e-04
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 41/154 (26%)

Query: 23  RNILEAVKPPFTADNRKKTIEKILRGKL-------ILPPYLTPDARELIRKL---LKRQV 72
           ++IL   +  F  +   K ++ + +  L       I+   ++ DA     +L   L  + 
Sbjct: 19  KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII---MSKDAVSGTLRLFWTLLSK- 74

Query: 73  AQRLGSGPNDGEAVRVHPFFRSI---NWSDVLSRKLEPPFKPSLTGEDDVSQFDTKF--- 126
                      E + V  F   +   N+  ++S       +PS+     + Q D  +   
Sbjct: 75  ----------QEEM-VQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 127 --------TRQTPVDSPDESL--LSESANLVFQG 150
                   +R  P     ++L  L  + N++  G
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF   N    ++++  GK          ++ DA++LIRK+L    + R+
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE 84
           +   ++ P   +  ++  +  L  +      L+ + R ++  +L+     R  +     E
Sbjct: 248 VACNMELPHGGEGWQQLRQGYLPPEF--TAGLSSELRSVLVMMLEPDPKLRATA-----E 300

Query: 85  AVRVHPFFR 93
           A+   P  R
Sbjct: 301 ALLALPVLR 309

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF   N    ++K+ +GK          ++  A++LIRK+L    + R+
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 274

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF   N +  I+K+ +GK          ++ +A+ELI+ +L     +R 
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRC 294

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  +      +K+     ++P +L+P A+ LIR+++     QR+       + +R  P+
Sbjct: 207 PFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITI-----QEIRRDPW 261

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDD 118
           F        L   L P  +   +  D 
Sbjct: 262 FNV-----NLPDYLRPMEEVQGSYADS 283

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            PF  D +++T+  +               +  A++ IR+LL +   +R+       +  
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM-----TIQDS 269

Query: 87  RVHPFFRSINWSDVLSRK 104
             HP+ +  +    LSRK
Sbjct: 270 LQHPWIKPKDTQQALSRK 287

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PPF     ++ + K+ +GK          ++  A++LI+++L+    +R+
Sbjct: 234 YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI 284

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF   N    ++++  GK          ++ DA++LIRK+L    + R+
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  ++     +KI  G   +P YL      L+  +L+    +R        + +R H +
Sbjct: 210 PFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATI-----KDIREHEW 264

Query: 92  FR 93
           F+
Sbjct: 265 FK 266

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF  +++ +   +I  G    P      +TP+A+ LI  +L     +R+ +     +  
Sbjct: 205 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA-----DQA 259

Query: 87  RVHPFFRS 94
              P+  +
Sbjct: 260 LKVPWICN 267

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 9/104 (8%)

Query: 42  IEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR-SINWSDV 100
           +E+ +   +  P  ++ +   L+  LL+    +R        E +   P+    +N +D 
Sbjct: 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRT-----TLEKLVTDPWVTQPVNLADY 287

Query: 101 LSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESA 144
              ++    KP       +S    +   ++  D      L    
Sbjct: 288 TWEEVFRVNKPE---SGVLSAASLEMGNRSLSDVAQAQELCGGE 328

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF  +++ +   +I  G    P      +TP+A+ LI  +L     +R+ +     +  
Sbjct: 228 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA-----DQA 282

Query: 87  RVHPFFRS 94
              P+  +
Sbjct: 283 LKVPWICN 290

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 43  EKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLS 102
           E+I+RG++     ++ + + LIR  L  + + R        E ++ HP+ + +      +
Sbjct: 253 EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDVLLPQETA 307

Query: 103 RKLEPPFKPS 112
                   P 
Sbjct: 308 EIHLHSLSPG 317

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF  +++ +  ++I  G    P      +TP+A++LI K+L    ++R+
Sbjct: 211 PPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 260

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  +  ++    IL  +L  P +++PD   LIR+ L  + + R        E + + P+
Sbjct: 238 PF--ERDQE----ILEAELHFPAHVSPDCCALIRRCLAPKPSSRP-----SLEEILLDPW 286

Query: 92  FRSINWSDVLSRKLEPP 108
            ++      L+     P
Sbjct: 287 MQTPAEDVPLNPSKGGP 303

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 31  PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           PPF+    + ++ ++I  GK          ++  A +L++KLL      R  +     E 
Sbjct: 217 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-----EE 271

Query: 86  VRVHPFFRS 94
              HP+ + 
Sbjct: 272 ALRHPWLQD 280

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 30/229 (13%), Positives = 60/229 (26%), Gaps = 45/229 (19%)

Query: 32  PFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF 91
           PF  D+     +KI  G    P YL P    L++ +L+    +R        + +R H +
Sbjct: 215 PFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATI-----KDIREHEW 269

Query: 92  FRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF 151
           F+         + L     P                        D+  L E         
Sbjct: 270 FK---------QDLPKYLFPEDPSYSS--------------TMIDDEALKE--------- 297

Query: 152 TYVAPSVLEEMHHDKPRIVKARSPRKETSSY--NYYLKPHHHHGLPQQSGMSGGHHVDQQ 209
                 V E+    +  ++     R         Y+L   +   + +             
Sbjct: 298 ------VCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDS 351

Query: 210 RSGGGDPFLVCSGGGIPAGASSPFYRATTNNHRVHRTLNTELKYSPEMM 258
                              A +P  R T +     ++ +  ++ +   +
Sbjct: 352 FLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHL 400

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP-PY---LTPDARELIRKLLKRQVAQRL 76
           PPF  +   K  EKI  G      P+   ++  A++ I  LL++   +R 
Sbjct: 205 PPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERY 254

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  + +++T+  I               +  A++ IR+LL +   +R+
Sbjct: 209 SPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 9/66 (13%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           PPF    +   +  I+ G+           +   ++LI +LL+     RL +     E  
Sbjct: 303 PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA-----EQA 357

Query: 87  RVHPFF 92
             HPFF
Sbjct: 358 LQHPFF 363

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           A+ PPFTA ++K+   KI  GK   +P   + +  E+I ++L  +   R    P+  E +
Sbjct: 211 ALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR----PSVEEIL 266

Query: 87  RVHPFFR 93
             +P   
Sbjct: 267 E-NPLIL 272

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 10/69 (14%)

Query: 31  PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           PPF+    + ++ ++I  GK          ++  A +L++KLL      R        E 
Sbjct: 342 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF-----TTEE 396

Query: 86  VRVHPFFRS 94
              HP+ + 
Sbjct: 397 ALRHPWLQD 405

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  D +++T+  I             + +  A++ IRKLL ++  +RL
Sbjct: 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 18/108 (16%)

Query: 31  PPFTADNRKKTI-------EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSG 79
            PF + +R  T        +KI +G           ++ +A++LI+ LL     +RL   
Sbjct: 207 VPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM- 265

Query: 80  PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFT 127
                 +R + + +  + S + S  L  P     +G    +     F 
Sbjct: 266 ----SGLRYNEWLQ--DGSQLSSNPLMTPDILGSSGAAVHTCVKATFH 307

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            PF  D +++T+  I               +  A++ IRKLL ++  +RL       +  
Sbjct: 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL-----TIQEA 270

Query: 87  RVHPFFRSINWSDVLSRKLE 106
             HP+   ++    + R+  
Sbjct: 271 LRHPWITPVDTQQAMVRRES 290

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF A+  ++ IE I+  +          ++ +A + + +LL ++   R+
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM 250

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  +N  +T+  +      +       ++ D ++ IRKLL      R+
Sbjct: 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM 403

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  ++  +T++ + R            ++P+A++ I+ LL+++  +RL
Sbjct: 248 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  ++ ++T   I +  +         ++  A + I+ LL +   +R 
Sbjct: 231 SPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP 280

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  DN  +T+  IL  +  L       ++ +A+E I KLL ++ + R+
Sbjct: 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRI 335

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 9/122 (7%)

Query: 28  AVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            +K  F A + K  + KI+ G    +  + + D R L+ +L KR    R    P+    +
Sbjct: 220 TLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDR----PSVNSIL 275

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKF---TRQTPVDSPDESLLSES 143
               F        +  + +   F      +        K     + +    P + +   +
Sbjct: 276 E-KGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPA 334

Query: 144 AN 145
           A 
Sbjct: 335 AK 336

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 15/120 (12%)

Query: 31  PPFTA---DNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
            PF     D  ++ + +I  GK  L       ++  A++L+ K+L     QRL +     
Sbjct: 218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTA----- 272

Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSE 142
             V  HP+    +W  +   +L     P L      + +      Q+PV  P   S L++
Sbjct: 273 ALVLRHPWIV--HWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRSTLAQ 330

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 7/64 (10%)

Query: 32  PFTADNRKKTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           PF  +       KI    L  P  P +  D ++LI ++L +    R+         +++H
Sbjct: 239 PFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV-----PEIKLH 293

Query: 90  PFFR 93
           P+  
Sbjct: 294 PWVT 297

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 31  PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF +++          +I  G+   P      ++ + + LIR LLK +  QR+
Sbjct: 196 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 249

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 30  KPPF-TADNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           K PF    N+   +  I+     +  P     D +++++  LKR   QR+         +
Sbjct: 236 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPEL 290

Query: 87  RVHPFFR 93
             HP+ +
Sbjct: 291 LAHPYVQ 297

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 30  KPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           K PF    N+   +  I+     +  P     D +++++  LKR   QR+         +
Sbjct: 217 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PEL 271

Query: 87  RVHPFFR 93
             HP+ +
Sbjct: 272 LAHPYVQ 278

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.5 bits (100), Expect = 8e-05
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 14/72 (19%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPY-------LTPDARELIRKLLKRQVAQRLGSGPND 82
           K PF   ++      I+RG   L          L  +A +LI +++     +R       
Sbjct: 237 KHPF--GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP-----T 289

Query: 83  GEAVRVHPFFRS 94
              V  HP F  
Sbjct: 290 AMKVLRHPLFWP 301

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 27  EAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           E +    TA    K    +  G +          + L++KLL ++   R    PN  E +
Sbjct: 213 ELLHVCDTAFETSKFFTDLRDGII--SDIFDKKEKTLLQKLLSKKPEDR----PNTSEIL 266

Query: 87  RVHPFFR 93
           R      
Sbjct: 267 R-TLTVW 272

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           + E + P  T   R +T+  +   K   L     P    +++ +L     +R    P   
Sbjct: 220 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMER----PEAI 275

Query: 84  EAVRVHPFFRSIN 96
             +  +  F  ++
Sbjct: 276 NIIE-NAVFEDLD 287

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 31  PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF +++          +I  G+   P      ++ + + LIR LLK +  QR+
Sbjct: 261 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 314

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 39/84 (46%), Gaps = 17/84 (20%)

Query: 31  PPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
            PF     ++  E I++GK  +      +++  A++L+R++L    A+R+       EA+
Sbjct: 231 LPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV----YEAL 285

Query: 87  RVHPFFRS-------INWSDVLSR 103
             HP+ +        I+  + + +
Sbjct: 286 N-HPWLKERDRYAYKIHLPETVEQ 308

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 32/180 (17%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
             PF    +++    +    L       +    ARELI K++     +R        + V
Sbjct: 227 SHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP-----SAKHV 281

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANL 146
             HPFF S      L ++L+           DVS    K +     D P    L      
Sbjct: 282 LKHPFFWS------LEKQLQFF--------QDVSDRIEKESL----DGPIVKQLERGGRA 323

Query: 147 VFQG--FTYVAPSVLEEMHHDKPRIVKARSPRKETSSYNYYLKPHHHHGLPQQSGMSGGH 204
           V +      +   +  ++   K R  K  S R    +     K HH+  LP +   + G 
Sbjct: 324 VVKMDWRENITVPLQTDL--RKFRTYKGGSVRDLLRAMRN--KKHHYRELPAEVRETLGT 379

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 31  PPFTADNRKKTI-EKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
            PF  +   + +  +IL  +          ++ +A++L+RKL+     +RL
Sbjct: 248 EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 15/120 (12%)

Query: 32  PFTADNR----KKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
           PF         +KTI++IL  K  +P    ++P+   LI ++     A R+         
Sbjct: 217 PFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISI-----PE 271

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESAN 145
           ++ H +F      ++ +  +      S   E +          Q   ++   ++ +   +
Sbjct: 272 IKTHSWFL----KNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLD 327

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 6/66 (9%)

Query: 31  PPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
              T   R + I  +   K  +L     P    +++ +L     +R    P   + +  +
Sbjct: 272 SFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER----PEATDIIE-N 326

Query: 90  PFFRSI 95
             F ++
Sbjct: 327 AIFENL 332

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 30  KPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           K PF    N+   +  I+     +  P     D +++++  LKR   QR+         +
Sbjct: 264 KTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI-----SIPEL 318

Query: 87  RVHPFFR 93
             HP+ +
Sbjct: 319 LAHPYVQ 325

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 31  PPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           PPF ++  +        +I  G+   P      ++ DA++LIR LLK    +RL
Sbjct: 227 PPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL 280

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.9
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.9
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.89
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.87
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.87
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.87
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.84
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.82
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.8
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.79
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.78
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.74
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.73
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.7
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.68
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.59
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.58
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.47
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.27
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.13
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.12
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.1
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.09
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.98
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.87
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.86
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.85
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.81
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.77
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.77
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.75
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.72
3niz_A	311	Rhodanese family protein; structural genomics, str	98.72
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.72
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.7
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.69
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.67
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.67
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.65
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.64
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.64
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.62
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.62
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.61
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.59
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.59
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.59
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.59
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.58
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.58
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.58
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.58
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.58
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.57
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.56
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.56
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.55
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.55
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.55
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.55
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.55
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.55
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.54
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.53
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.53
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.53
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.52
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.52
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.51
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.51
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.51
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.51
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.51
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.51
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.5
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.5
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.49
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.48
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.48
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.48
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.48
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.47
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.47
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.46
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.46
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.45
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.45
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.44
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.44
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.44
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.44
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.44
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.43
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.43
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.43
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.42
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.42
3bhy_A	283	Death-associated protein kinase 3; death associate	98.41
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.4
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.4
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.39
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.39
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.37
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.33
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.33
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.32
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.3
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.29
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.29
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.28
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.28
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.27
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.25
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.24
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.23
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.23
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.21
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.21
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.2
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.19
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.19
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.18
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.17
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.17
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.13
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.02
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.01
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.99
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.97
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.96
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.95
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.93
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.91
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.88
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.8
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.79
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.76
3ork_A	311	Serine/threonine protein kinase; structural genomi	97.76
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.74
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.72
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.67
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.62
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.54
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.53
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	97.52
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.49
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.37
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.36
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.36
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.35
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.35
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.34
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.31
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.31
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.29
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	97.27
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	97.21
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.2
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.16
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.16
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.12
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	97.06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.03
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.03
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.03
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.02
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.99
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.98
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	96.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.94
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	96.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.91
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.88
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.82
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	96.77
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	96.74
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.72
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	96.71
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	96.67
3pls_A	298	Macrophage-stimulating protein receptor; protein k	96.67
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	96.66
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	96.65
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	96.61
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.56
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	96.54
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.54
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	96.54
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	96.52
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.5
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	96.46
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	96.37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.2
2a19_B	284	Interferon-induced, double-stranded RNA-activated	96.14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	95.98
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	95.55
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	95.48
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	95.27
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	94.87
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	94.52
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	94.43
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	94.17
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	94.16
3uqc_A	286	Probable conserved transmembrane protein; structur	94.02
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	93.68
3soc_A	322	Activin receptor type-2A; structural genomics cons	93.59
3q4u_A	301	Activin receptor type-1; structural genomics conso	93.54
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	93.12
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	92.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	92.1
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	91.13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	89.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	87.36
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	85.21
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	84.98

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=3.7e-24  Score=196.10  Aligned_cols=148  Identities=30%  Similarity=0.610  Sum_probs=128.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC-
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS-   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~-   78 (258)
                      |++.+   ..|+.++||        +|++|.+||.+.+...++.+|+...+.+|..++.++++||++||.+||.+|+++ 
T Consensus       194 E~~~~---~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~  270 (353)
T 3txo_A          194 EILQE---MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSL  270 (353)
T ss_dssp             HHHHH---HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSG
T ss_pred             hhcCC---CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCc
Confidence            55553   458888885        889999999999999999999999999999999999999999999999999996 


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeCch
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVAPS  157 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~~~  157 (258)
                      ...|+++|++||||+++||+.+..++++|||+|.+.+..|+++||.+|+.+.+..++.+.. .....+..|.||+|+++.
T Consensus       271 ~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~  350 (353)
T 3txo_A          271 TQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFEYVSPE  350 (353)
T ss_dssp             GGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCHHHHTSCCCCCCCCTTSGGGSCGGGGTTCCEECC-
T ss_pred             ccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCCcccccccCcccccCCCcCCCccccccCcccccccCCceeeCcc
Confidence            3456799999999999999999999999999999999999999999999998888876542 223345689999999986


Q ss_pred             H
Q psy1025         158 V  158 (258)
Q Consensus       158 ~  158 (258)
                      +
T Consensus       351 ~  351 (353)
T 3txo_A          351 L  351 (353)
T ss_dssp             -
T ss_pred             c
Confidence            5

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.90  E-value=4.6e-24  Score=198.97  Aligned_cols=150  Identities=26%  Similarity=0.549  Sum_probs=126.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA---------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKR   70 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~k   70 (258)
                      |++.+   .+|+.++||        +|++|.+||..         .....++..|+...+.+|..++.++++||++||.+
T Consensus       223 E~l~~---~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~  299 (396)
T 4dc2_A          223 EILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNK  299 (396)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             hhhcC---CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcC
Confidence            67774   578899995        88999999963         23456788899999999999999999999999999


Q ss_pred             ccccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCc
Q psy1025          71 QVAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVF  148 (258)
Q Consensus        71 dP~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F  148 (258)
                      ||.+|+|+.+ .|+++|++||||+++||+.+..+++.|||+|.+.+..|+++||.+|+.+.+..++.+... ....+..|
T Consensus       300 dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~~f  379 (396)
T 4dc2_A          300 DPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEF  379 (396)
T ss_dssp             CTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCSSTTGGGSCHHHHTSCCCCCCCCHHHHTTSCGGGG
T ss_pred             CHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCCccchhhcChhhccCCCccCCCcchhhcccccccc
Confidence            9999999743 367999999999999999999999999999999999999999999999988888876533 23345689


Q ss_pred             cCeeeeCchHHH
Q psy1025         149 QGFTYVAPSVLE  160 (258)
Q Consensus       149 ~gFsy~~~~~~~  160 (258)
                      .||+|+++.++.
T Consensus       380 ~~f~~~~~~~~~  391 (396)
T 4dc2_A          380 EGFEYINPLLMS  391 (396)
T ss_dssp             TTCCEECC----
T ss_pred             CCcEeECccccc
Confidence            999999998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.90  E-value=3.8e-24  Score=196.15  Aligned_cols=148  Identities=26%  Similarity=0.573  Sum_probs=128.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+.++||        +|++|.+||.+.+...++.+|+...+.+|..++.++++||.+||.+||.+|+|++
T Consensus       191 E~~~~---~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  267 (353)
T 2i0e_A          191 EIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCG  267 (353)
T ss_dssp             HHHTT---CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCS
T ss_pred             hhhcC---CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            66664   578889995        8899999999999999999999999999999999999999999999999999987


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeeeeCchH
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTYVAPSV  158 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy~~~~~  158 (258)
                      ..++++|++||||+++||+.+..++++|||+|.+.+. |+++||.+|+.+.+..++.+... ....+..|.||+|+++.+
T Consensus       268 ~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~~  346 (353)
T 2i0e_A          268 PEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNSEF  346 (353)
T ss_dssp             TTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC---CHHHHHHHHSCCCCCCCCHHHHHHSCTTTTCSCCEECTTC
T ss_pred             CCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc-chhhccchhccCCcccCCccccccccccccccCCCeeeCccc
Confidence            7788999999999999999999999999999999888 99999999998887777655322 223456899999999876


Q ss_pred             H
Q psy1025         159 L  159 (258)
Q Consensus       159 ~  159 (258)
                      +
T Consensus       347 ~  347 (353)
T 2i0e_A          347 L  347 (353)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.89  E-value=2.8e-24  Score=212.71  Aligned_cols=148  Identities=26%  Similarity=0.576  Sum_probs=133.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.+   ..|+.++||        +|++|.+||.+.+..+++..|+...+.+|..++.++++||++||.+||.+|+++.
T Consensus       512 E~l~~---~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  588 (674)
T 3pfq_A          512 EIIAY---QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCG  588 (674)
T ss_dssp             HHHTC---CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCS
T ss_pred             hhhcC---CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCC
Confidence            67764   578899995        8999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeeeeCchH
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTYVAPSV  158 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy~~~~~  158 (258)
                      +.|+++|++||||+++||+.|..+++.|||+|.+.+ .|+++||.+|+.+.+..++.+... ....+..|.||+|+++.+
T Consensus       589 ~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~~  667 (674)
T 3pfq_A          589 PEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNSEF  667 (674)
T ss_dssp             TTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTTTTTSSCSSCCCCCHHHHTTCCGGGGTTCCEECSSC
T ss_pred             CCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCchhccCCCccCCCchhhhhcccccccCCCcccChhh
Confidence            788899999999999999999999999999999988 899999999999988888876533 233456899999999987


Q ss_pred             H
Q psy1025         159 L  159 (258)
Q Consensus       159 ~  159 (258)
                      +
T Consensus       668 ~  668 (674)
T 3pfq_A          668 L  668 (674)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.89  E-value=3.1e-23  Score=188.84  Aligned_cols=146  Identities=36%  Similarity=0.624  Sum_probs=123.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+.++||        +|++|.+||.+.+...++..|+...+.+|..++.++++||.+||.+||.+|+|++
T Consensus       175 E~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~  251 (337)
T 1o6l_A          175 EVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGG  251 (337)
T ss_dssp             GGGSS---SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             hhhcC---CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCC
Confidence            67774   578888995        8899999999999999999999999999999999999999999999999999987


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-----ccc---ccCCCccCe
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-----LSE---SANLVFQGF  151 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-----~~~---~~~~~F~gF  151 (258)
                      +.++++|++||||.+++|+.+..+++.|||+|.+.+..|+++||.+|+.+....++.+..     ...   ..+..|.||
T Consensus       252 ~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f  331 (337)
T 1o6l_A          252 PSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQEMFEDF  331 (337)
T ss_dssp             TTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTSCCC--------------------CCTTTTC
T ss_pred             CCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCcchhhcccchhccCccCcCCCcccccccccccccccccccCCCc
Confidence            778999999999999999999999999999999999999999999999887766654421     111   135689999


Q ss_pred             eeeCc
Q psy1025         152 TYVAP  156 (258)
Q Consensus       152 sy~~~  156 (258)
                      +|+++
T Consensus       332 ~~~~~  336 (337)
T 1o6l_A          332 DYIAD  336 (337)
T ss_dssp             CEECC
T ss_pred             eecCC
Confidence            99874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.87  E-value=8.6e-23  Score=188.54  Aligned_cols=147  Identities=30%  Similarity=0.600  Sum_probs=96.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+.++||        +|++|.+||.+.+..+++.+|+...+.+|..++.++++||.+||.+||.+|+++.
T Consensus       209 E~~~~---~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          209 EVLHK---QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             HHhCC---CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence            66664   578899995        8899999999999999999999999999999999999999999999999999973


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc----ccc---cccCCCccCee
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES----LLS---ESANLVFQGFT  152 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~----~~~---~~~~~~F~gFs  152 (258)
                       .++++|++||||+++||+.+..+++.|||+|.+.+..|+++||.+|+.+....+....    ...   ...+..|.||+
T Consensus       286 -~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~  364 (373)
T 2r5t_A          286 -DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDSVLVTASVKEAAEAFLGFS  364 (373)
T ss_dssp             -TTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC--------------------------------------------
T ss_pred             -CCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCcchhhhcCcccccccccccccCCccccccccccccccccCCCCc
Confidence             5678999999999999999999999999999999999999999999877644322111    111   12345799999


Q ss_pred             eeCchH
Q psy1025         153 YVAPSV  158 (258)
Q Consensus       153 y~~~~~  158 (258)
                      |+++..
T Consensus       365 ~~~~~~  370 (373)
T 2r5t_A          365 YAPPTD  370 (373)
T ss_dssp             ------
T ss_pred             ccCchh
Confidence            988753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.87  E-value=2e-22  Score=199.00  Aligned_cols=140  Identities=26%  Similarity=0.466  Sum_probs=110.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |||.+  ..+|+.+|||        +|++|.+||.+.   +...++..|+...+.+|..+|+++++||.+||++||.+|+
T Consensus       360 Evl~~--~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl  437 (689)
T 3v5w_A          360 EVLQK--GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL  437 (689)
T ss_dssp             HHHST--TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCT
T ss_pred             HHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCC
Confidence            77763  3689999996        999999999763   4567788899999999999999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCC-----CCCCCChhcccCCCCCCCCccccccccCCCccCe
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGED-----DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF  151 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~-----D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gF  151 (258)
                      |+..+|+++|++||||++|||+.|..++++|||+|.+....     |+++||++++...+        .....+..|.+|
T Consensus       438 ~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD~~~fd~e~~~~~~--------~~~~d~~~f~~F  509 (689)
T 3v5w_A          438 GCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIK--------LLDSDQELYRNF  509 (689)
T ss_dssp             TCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC---------CCCC--------CCHHHHTTTTTC
T ss_pred             CCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCCCCcCCCCCCccCCccccCCCC--------CCchHHHHHhCC
Confidence            98778999999999999999999999999999999876555     45555555554322        223345679999


Q ss_pred             eeeCch
Q psy1025         152 TYVAPS  157 (258)
Q Consensus       152 sy~~~~  157 (258)
                      +|..+.
T Consensus       510 s~~~~~  515 (689)
T 3v5w_A          510 PLTISE  515 (689)
T ss_dssp             CEECHH
T ss_pred             CccCcc
Confidence            998764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.87  E-value=1.3e-22  Score=185.38  Aligned_cols=146  Identities=25%  Similarity=0.520  Sum_probs=93.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+.++||        +|++|.+||.+.+...++..|....+.+|..++.++++||.+||.+||.+|+++ 
T Consensus       188 E~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~-  263 (345)
T 1xjd_A          188 EILLG---QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV-  263 (345)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTT-
T ss_pred             hhhcC---CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCC-
Confidence            66664   468889995        889999999999999999999999999999999999999999999999999986 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCccCeeeeCchH
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVFQGFTYVAPSV  158 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F~gFsy~~~~~  158 (258)
                         .++|++||||++++|+.+..+++.|||+|.+.+..|+++||.+|+.+.+..++.+.. .....+..|.||+|+++.+
T Consensus       264 ---~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~~  340 (345)
T 1xjd_A          264 ---RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFSFMNPGM  340 (345)
T ss_dssp             ---BSCGGGSGGGTTCCHHHHHTTCSCC--------------------------------------CCTTTTCCC-----
T ss_pred             ---hHHHHcCccccCCCHHHHhhCCCCCCcCCCCCCcchhhhcchhhcccCccCCcccccccccccccccCCCeeeChhh
Confidence               239999999999999999999999999999999999999999999887766655432 2233456899999999876


Q ss_pred             HH
Q psy1025         159 LE  160 (258)
Q Consensus       159 ~~  160 (258)
                      ..
T Consensus       341 ~~  342 (345)
T 1xjd_A          341 ER  342 (345)
T ss_dssp             --
T ss_pred             hh
Confidence            43

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.85  E-value=9.7e-22  Score=179.18  Aligned_cols=146  Identities=27%  Similarity=0.556  Sum_probs=122.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA---------DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKR   70 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---------~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~k   70 (258)
                      |++.+   ..|+.++||        +|++|.+||..         .+...++..|....+.+|..++.++++||.+||.+
T Consensus       180 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~  256 (345)
T 3a8x_A          180 EILRG---EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNK  256 (345)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             cccCC---CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcC
Confidence            56664   468888995        88999999975         45566788899999999999999999999999999


Q ss_pred             ccccccCCCC-CCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc-cccccCCCc
Q psy1025          71 QVAQRLGSGP-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL-LSESANLVF  148 (258)
Q Consensus        71 dP~~RLg~~~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~-~~~~~~~~F  148 (258)
                      ||.+|+++.. .|+++|++||||.+++|+.+..+++.|||+|.+.+..|+++||.+|+.+....++.+.. .....+..|
T Consensus       257 dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f  336 (345)
T 3a8x_A          257 DPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEF  336 (345)
T ss_dssp             STTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCTTTCGGGSCHHHHTSCSSCCCCCHHHHTTSCGGGG
T ss_pred             CHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCcccCCCcccccccccccccc
Confidence            9999999742 35789999999999999999999999999999999999999999999887766665432 222345679


Q ss_pred             cCeeeeCc
Q psy1025         149 QGFTYVAP  156 (258)
Q Consensus       149 ~gFsy~~~  156 (258)
                      .||+|+++
T Consensus       337 ~~f~~~~~  344 (345)
T 3a8x_A          337 EGFEYINP  344 (345)
T ss_dssp             TTCCEECC
T ss_pred             CCCEeeCC
Confidence            99999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.84  E-value=1.8e-21  Score=182.10  Aligned_cols=149  Identities=26%  Similarity=0.347  Sum_probs=116.1

Q ss_pred             ccccCCCCCC-CCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTA-HTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPP--YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~g-h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~--~~S~ea~dLI~~LL~kdP~~   74 (258)
                      ||+.+....+ |+.++||        +|++|.+||.+.+...++.+|+...  +.+|.  .++.++++||++||.. +.+
T Consensus       239 E~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~-~~~  317 (410)
T 3v8s_A          239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTD-REV  317 (410)
T ss_dssp             HHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSC-GGG
T ss_pred             HHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccC-hhh
Confidence            5666432112 7788885        8899999999999999999998753  56664  6999999999999995 455


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCeeee
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGFTYV  154 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gFsy~  154 (258)
                      |+|.  .++++|++||||++++|+.+..+++.|||+|.+.+..|+++||+.++......+...+......+..|.||||+
T Consensus       318 rlgR--~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~  395 (410)
T 3v8s_A          318 RLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQLPFVGFTYY  395 (410)
T ss_dssp             CTTS--SCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSCCCCSCCSCCCCCCCCSSCCCTTGGGTTCCEE
T ss_pred             hCCC--CCHHHHhcCccccCCCHHHHhhcccCCCCCCcCCCccchhhcCCccccccccccCCCchhhcccccccccceEe
Confidence            6552  46799999999999999999999999999999999999999998777655444433332333456789999999


Q ss_pred             CchHH
Q psy1025         155 APSVL  159 (258)
Q Consensus       155 ~~~~~  159 (258)
                      ++..+
T Consensus       396 ~~~~~  400 (410)
T 3v8s_A          396 SNRRY  400 (410)
T ss_dssp             CC---
T ss_pred             Ccccc
Confidence            98753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.82  E-value=5.4e-20  Score=168.07  Aligned_cols=135  Identities=30%  Similarity=0.540  Sum_probs=116.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   .+|+..+|+        +|++|.+||.+.+...++.+|....+.+|..++.++++||.+||.+||.+|+++.
T Consensus       208 E~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~  284 (350)
T 1rdq_E          208 EIILS---KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             HHhcC---CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCc
Confidence            66664   468888885        8899999999999999999999999999999999999999999999999999976


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccccccccCCCccCe
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF  151 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gF  151 (258)
                      ..++++|++||||.++||+.+..++++|||+|.+.+..|+++|| +|+.+.+..++.     +..+..|.||
T Consensus       285 ~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~-~~~~~~~~~~~~-----~~~~~~f~~f  350 (350)
T 1rdq_E          285 KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEEIRVSIN-----EKCGKEFTEF  350 (350)
T ss_dssp             TTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSC-CCCCCCCCCCSS-----CCSTTTTTTC
T ss_pred             cCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcccccccc-cccccccccCCC-----cchhhhcCCC
Confidence            67789999999999999999999999999999999999999999 566655443332     2234568876

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.81  E-value=4.1e-20  Score=166.97  Aligned_cols=101  Identities=39%  Similarity=0.782  Sum_probs=94.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.+   .+|+.++|+        +|++|++||.+.+..+++.+|++..+.+|..+|+++++||.+||.+||.+|+++.
T Consensus       196 E~~~~---~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~  272 (304)
T 3ubd_A          196 EVVNR---RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAG  272 (304)
T ss_dssp             HHHHT---SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             HHhcc---CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence            77775   578899994        9999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      ..+++||++||||+++||+.|..|+++|||+|
T Consensus       273 ~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          273 PDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             TTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             cCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            66789999999999999999999999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.80  E-value=3.5e-20  Score=174.79  Aligned_cols=142  Identities=27%  Similarity=0.470  Sum_probs=105.7

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCCC---CCCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILPP---YLTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      ..|+.++||        +|++|++||.+.+..+++.+|+..  .+.+|.   .++.++++||++||+.+| +|++.  .+
T Consensus       256 ~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~-~r~~r--~~  332 (437)
T 4aw2_A          256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSRE-HRLGQ--NG  332 (437)
T ss_dssp             CEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGG-GCTTT--TT
T ss_pred             CCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccc-cccCC--CC
Confidence            357888885        899999999999999999999864  356665   489999999999999765 45442  45


Q ss_pred             chhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcc--ccccccCCCccCeeeeCchHHH
Q psy1025          83 GEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES--LLSESANLVFQGFTYVAPSVLE  160 (258)
Q Consensus        83 ~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~--~~~~~~~~~F~gFsy~~~~~~~  160 (258)
                      +++|++||||+++||+.+  ++++|||+|.+.+..|+++||.+++......+....  ......+..|.||||+++..+.
T Consensus       333 ~~eil~Hpff~~i~w~~l--~~~~~p~~P~~~~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~  410 (437)
T 4aw2_A          333 IEDFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLS  410 (437)
T ss_dssp             THHHHTSGGGTTCCTTTG--GGSCCSCCCCCSSTTCCTTSCCC------------------CCTTGGGTTCCEESSCTTS
T ss_pred             HHHHhCCCccCCCCHHHH--hhCCCCCCCcCCCccchhhcCCcccccccccCCCCCccccccccCccccCCCcCCchhhc
Confidence            799999999999999999  679999999999999999999887654433332221  1223345689999999988754


Q ss_pred             hh
Q psy1025         161 EM  162 (258)
Q Consensus       161 ~~  162 (258)
                      ..
T Consensus       411 ~~  412 (437)
T 4aw2_A          411 DR  412 (437)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.79  E-value=2.7e-19  Score=161.26  Aligned_cols=115  Identities=37%  Similarity=0.682  Sum_probs=95.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+.++|+        +|++|.+||.+.+...++.+|+...+.+|..++.++++||.+||.+||.+|+++.
T Consensus       173 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~  249 (318)
T 1fot_A          173 EVVST---KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNL  249 (318)
T ss_dssp             HHHTT---CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred             hHhcC---CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCc
Confidence            66664   468888885        8899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCC-CCCCCCCCChh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT-GEDDVSQFDTK  125 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~-~~~D~s~Fd~~  125 (258)
                      ..++++|++||||++++|+.+..+.++|||+|.+. ...|+++||..
T Consensus       250 ~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~d~~~f~~~  296 (318)
T 1fot_A          250 QNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKY  296 (318)
T ss_dssp             TTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC-------------
T ss_pred             CCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcCCCccchhhcCCC
Confidence            66789999999999999999999999999999987 48899999963

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.78  E-value=1.6e-19  Score=168.99  Aligned_cols=138  Identities=28%  Similarity=0.453  Sum_probs=100.9

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CCCCC---CCCCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KLILP---PYLTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P---~~~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      ..|+.++||        +|++|++||.+.+..+++.+|+..  .+.+|   ..++.++++||++||+ +|.+|+|.  .+
T Consensus       245 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr--~~  321 (412)
T 2vd5_A          245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGR--GG  321 (412)
T ss_dssp             SEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTT--TT
T ss_pred             CCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCC--CC
Confidence            357888995        899999999999999999999863  24455   5799999999999999 99999985  57


Q ss_pred             chhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCC-----CCCc--cccccccCCCccCeeeeC
Q psy1025          83 GEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVD-----SPDE--SLLSESANLVFQGFTYVA  155 (258)
Q Consensus        83 ~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~-----s~~~--~~~~~~~~~~F~gFsy~~  155 (258)
                      +++|++||||+++||+.+  +...|||+|.+.+..|++|||..+.......     ...+  .......+..|.||||++
T Consensus       322 ~~ei~~Hpff~~i~w~~l--~~~~~p~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~  399 (412)
T 2vd5_A          322 AGDFRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSC  399 (412)
T ss_dssp             HHHHHTSGGGTTCCSTTS--TTSCCSCCCC-----CCSSCC--CCCCCTTSSSSSCCTTTC-----CCTTGGGTTCCBSC
T ss_pred             HHHHhcCCCcCCCCHHHH--hhcCCCCCCcCCCcccccccCcccccccccccccCCCcccccCCCccccCCCCCCCcccC
Confidence            899999999999999998  5678999999999999999997543322111     0110  111123456799999998


Q ss_pred             chH
Q psy1025         156 PSV  158 (258)
Q Consensus       156 ~~~  158 (258)
                      +..
T Consensus       400 ~~~  402 (412)
T 2vd5_A          400 MAL  402 (412)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.74  E-value=2.9e-18  Score=160.65  Aligned_cols=119  Identities=35%  Similarity=0.623  Sum_probs=102.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|..+++++++||.+||.+||.+|++..
T Consensus       319 E~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  395 (446)
T 4ejn_A          319 EVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGG  395 (446)
T ss_dssp             HHHHT---SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             hhcCC---CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCC
Confidence            56654   467888884        8889999999999999999999999999999999999999999999999999765


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccC
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ  129 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~  129 (258)
                      ...+++|++||||.+++|+.+..+++.|||+|.+.+..|+++||++|+.+
T Consensus       396 ~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~~~~  445 (446)
T 4ejn_A          396 SEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ  445 (446)
T ss_dssp             TTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC-------
T ss_pred             CCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCCCccchhhcchhhhcC
Confidence            55689999999999999999999999999999999999999999999865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.73  E-value=3.9e-18  Score=153.48  Aligned_cols=127  Identities=61%  Similarity=1.029  Sum_probs=93.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|+...+.+|..++.++++||.+||.+||.+|+++.
T Consensus       191 E~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~  267 (327)
T 3a62_A          191 EILMR---SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAG  267 (327)
T ss_dssp             HHHTT---SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred             hhCcC---CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence            55653   467888884        8889999999999999999999999999999999999999999999999999886


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCc
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDE  137 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~  137 (258)
                      +.++++|++||||++++|+.+..+.+.|||+|.+.+..|+++|+.+|+...+..++++
T Consensus       268 ~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (327)
T 3a62_A          268 PGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD  325 (327)
T ss_dssp             TTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-------------------------
T ss_pred             CCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChhhhhhcchhhhccccCCCCCC
Confidence            6678999999999999999999999999999999999999999999988777766643

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.70  E-value=1.4e-17  Score=150.84  Aligned_cols=97  Identities=30%  Similarity=0.540  Sum_probs=84.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.+   .+|+..+|+        +|++|++||.+.+..+++.+|++.++.+|..+|+++++||.+||.+||.+|+++.
T Consensus       204 Evl~~---~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~  280 (311)
T 4aw0_A          204 ELLTE---KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCE  280 (311)
T ss_dssp             HHHHH---SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSG
T ss_pred             HHHcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChH
Confidence            77775   578999995        9999999999999999999999999999999999999999999999999999862


Q ss_pred             C-CCchhhccCCccccCChhhhhcCCCCCCC
Q psy1025          80 P-NDGEAVRVHPFFRSINWSDVLSRKLEPPF  109 (258)
Q Consensus        80 ~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf  109 (258)
                      . .+..+|++||||++|||+.|..+  +||.
T Consensus       281 e~~~~~~i~~Hp~F~~idw~~l~~~--~pP~  309 (311)
T 4aw0_A          281 EMEGYGPLKAHPFFESVTWENLHQQ--TPPK  309 (311)
T ss_dssp             GGTCHHHHHTSGGGTTCCCTTGGGS--CCCC
T ss_pred             HHcCCHHHHCCCCcCCCCHHHhcCC--CCCC
Confidence            1 23345899999999999999643  4554

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.68  E-value=2.3e-17  Score=159.70  Aligned_cols=137  Identities=23%  Similarity=0.441  Sum_probs=107.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+..+||        +|++|.+||.+.    +...++..|+...+.+|..++.++++||.+||.+||.+|
T Consensus       359 E~l~~---~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R  435 (543)
T 3c4z_A          359 ELLLG---EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR  435 (543)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             hhhcC---CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHC
Confidence            66764   478889995        899999999875    467788899999999999999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCC-----CCCCCCCCChhcccCCCCCCCCccccccccCCCccC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT-----GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG  150 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~-----~~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~g  150 (258)
                      +++...++++|++||||++++|+.+..+.+.|||+|...     +..|+.+|+..   ...       ......+..|.+
T Consensus       436 ~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~~~~~~~~d~~~f~~~---~~~-------~~~~~~~~~f~~  505 (543)
T 3c4z_A          436 LGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV---KGV-------AFEKADTEFFQE  505 (543)
T ss_dssp             CCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSSCCSCC----CCCC------CC-------CCCHHHHHHHHH
T ss_pred             CCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCccccccCCchhhhhcccc---CCC-------CCCcchhhHhhc
Confidence            998666789999999999999999999999999999864     34456666532   000       112233457999


Q ss_pred             eeeeCch
Q psy1025         151 FTYVAPS  157 (258)
Q Consensus       151 Fsy~~~~  157 (258)
                      |+|....
T Consensus       506 f~~~~~~  512 (543)
T 3c4z_A          506 FASGTCP  512 (543)
T ss_dssp             HCCEECH
T ss_pred             CCCCCCC
Confidence            9998754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.59  E-value=4.2e-15  Score=137.70  Aligned_cols=114  Identities=21%  Similarity=0.357  Sum_probs=96.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC---CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA---DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+.+..+|+..+||        +|++|.+||..   .....++..+....+.+|..++.++++||.+||.+||.+|+
T Consensus       184 E~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~  263 (384)
T 4fr4_A          184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRF  263 (384)
T ss_dssp             GGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             eeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhc
Confidence            67765445678999995        88999999974   45667778888888999999999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccC
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ  129 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~  129 (258)
                      ++    +++|++||||.+++|+.+..+++.|||+|...    ..+||+.|+.+
T Consensus       264 s~----~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~----~~~~~~~~~~~  308 (384)
T 4fr4_A          264 SQ----LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKG----RLNCDPTFELE  308 (384)
T ss_dssp             CS----HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCC----SSCCCCCCCST
T ss_pred             cc----HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCC----CCCCCCccChh
Confidence            85    69999999999999999999999999999853    35666666544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.58  E-value=1.6e-15  Score=147.71  Aligned_cols=136  Identities=26%  Similarity=0.384  Sum_probs=101.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD----NRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   .+|+.++||        +|++|.+||.+.    ....++..|......+|..++.++++||.+||.+||.+|
T Consensus       355 Evl~~---~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R  431 (576)
T 2acx_A          355 EVVKN---ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER  431 (576)
T ss_dssp             HHHTT---CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHcC---CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHc
Confidence            66664   468888885        889999999875    456778888888889999999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCC-----CCCCCCCChhcccCCCCCCCCccccccccCCCccC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTG-----EDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQG  150 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~-----~~D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~g  150 (258)
                      +|+...++++|++||||+++||+.+..+.+.|||+|....     ..|+.+|+..   ..       .......+..|.+
T Consensus       432 ~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~~~~~~~~~d~~~f~~~---~~-------~~~~~~~~~~f~~  501 (576)
T 2acx_A          432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTV---KG-------VELEPTDQDFYQK  501 (576)
T ss_dssp             TTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCCCC---------------------------CHHHHHHHHH
T ss_pred             CCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCccccccCCcccHhhcccc---CC-------CCCCccHHHHHhh
Confidence            9876567899999999999999999999999999998643     3445555431   00       0122333456888


Q ss_pred             eeeeCc
Q psy1025         151 FTYVAP  156 (258)
Q Consensus       151 Fsy~~~  156 (258)
                      |.....
T Consensus       502 f~~~~~  507 (576)
T 2acx_A          502 FATGSV  507 (576)
T ss_dssp             HCCEEC
T ss_pred             hccCCC
Confidence            887653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=1.4e-13  Score=125.15  Aligned_cols=114  Identities=37%  Similarity=0.667  Sum_probs=91.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC----CCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA----DNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~----~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+. ...++..+|.        +|++|..||..    .....+...++.....+|..++..+++||.+||..||.+|
T Consensus       230 E~~~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  308 (355)
T 1vzo_A          230 DIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR  308 (355)
T ss_dssp             HHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhcCC-CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHh
Confidence            455532 2356777773        88999999974    3456667778888888999999999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQF  122 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~F  122 (258)
                      +++....+++|++|+||..++|+.+..+++++||.|.+.+..|.++|
T Consensus       309 ~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~~~~d~~~~  355 (355)
T 1vzo_A          309 LGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF  355 (355)
T ss_dssp             TTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CCC---
T ss_pred             cCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCccccccccccC
Confidence            98765678999999999999999999999999999999988888876

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.27  E-value=2.2e-12  Score=114.69  Aligned_cols=79  Identities=18%  Similarity=0.361  Sum_probs=70.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.++  ..++.++|+        +|++|++||.+.+...++.+|....+.+|..+|+++++||.+||.+||.+|+++ 
T Consensus       181 E~~~~~--~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~-  257 (275)
T 3hyh_A          181 EVISGK--LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISI-  257 (275)
T ss_dssp             HHHSSS--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-
T ss_pred             hhhcCC--CCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCH-
Confidence            788863  223567884        999999999999999999999999999999999999999999999999999974 


Q ss_pred             CCCchhhccCCccc
Q psy1025          80 PNDGEAVRVHPFFR   93 (258)
Q Consensus        80 ~~g~~eIk~HpfF~   93 (258)
                          +||++||||+
T Consensus       258 ----~eil~hpw~k  267 (275)
T 3hyh_A          258 ----HEIMQDDWFK  267 (275)
T ss_dssp             ----HHHHHCHHHH
T ss_pred             ----HHHHcCcccc
Confidence                9999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.15  E-value=1.9e-11  Score=112.04  Aligned_cols=79  Identities=19%  Similarity=0.280  Sum_probs=68.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      ||+.+   .+|+..+|+        +|++|.+||.+.+..+++..|....   +..+..+|+++++||.+||.+||.+|+
T Consensus       240 Evl~~---~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  316 (346)
T 4fih_A          240 ELISR---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA  316 (346)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCc
Confidence            77774   578999994        9999999999999999999988753   333457999999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     +||++||||+.
T Consensus       317 ta-----~e~l~Hp~~~~  329 (346)
T 4fih_A          317 TA-----AELLKHPFLAK  329 (346)
T ss_dssp             CH-----HHHTTCGGGGG
T ss_pred             CH-----HHHhcCHhhcC
Confidence            85     99999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.13  E-value=2.2e-11  Score=118.28  Aligned_cols=85  Identities=19%  Similarity=0.254  Sum_probs=75.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      ||+.+   .+|+..+|+        +|++|.+||.+.+..+++.+|....+.+|.    .+|.++++||.+||++||.+|
T Consensus       326 Ev~~~---~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R  402 (573)
T 3uto_A          326 EVAEG---KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR  402 (573)
T ss_dssp             HHHTT---CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence            78885   578899984        899999999999999999999998877763    689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +++     +++++||||+..+|...
T Consensus       403 ~t~-----~e~l~Hpw~~~~~~~~~  422 (573)
T 3uto_A          403 MTI-----HQALEHPWLTPGNAPGR  422 (573)
T ss_dssp             CCH-----HHHHHSTTTSCCCCTTT
T ss_pred             cCH-----HHHhcCcCcCCCCCCCc
Confidence            985     99999999999998753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.12  E-value=3.6e-11  Score=110.38  Aligned_cols=79  Identities=23%  Similarity=0.299  Sum_probs=70.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      ||+.|   .+|+..+|+        +|++|++||.+.+..+++.+|+...+ .+|..+|.++++||.+||.+||.+|+++
T Consensus       195 E~l~~---~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~  271 (350)
T 4b9d_A          195 EICEN---KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSV  271 (350)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCH
Confidence            78885   578999994        99999999999999999999998765 4567899999999999999999999974


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           ++|++||||..
T Consensus       272 -----~e~l~hp~~~~  282 (350)
T 4b9d_A          272 -----NSILEKGFIAK  282 (350)
T ss_dssp             -----HHHHTSHHHHT
T ss_pred             -----HHHhcCHHhhc
Confidence                 99999999973

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.11  E-value=5.4e-11  Score=110.81  Aligned_cols=83  Identities=20%  Similarity=0.226  Sum_probs=67.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC--------------------CC------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI--------------------LP------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~--------------------~P------   53 (258)
                      ||+.|  ...|+.++|+        +|++|++||.+.+...++..|+.....                    +|      
T Consensus       232 Ev~~~--~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (398)
T 4b99_A          232 ELMLS--LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVP  309 (398)
T ss_dssp             HHHTT--CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCC
T ss_pred             HHhcC--CCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCC
Confidence            77776  3568999994        999999999999999988888642111                    11      


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                           +.+|.+++|||.+||.+||.+|+++     +++++||||+...+
T Consensus       310 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          310 WETVYPGADRQALSLLGRMLRFEPSARISA-----AAALRHPFLAKYHD  353 (398)
T ss_dssp             HHHHSTTCCHHHHHHHHHHSCSSTTTSCCH-----HHHTTSGGGTTTCC
T ss_pred             HHHhCCCCCHHHHHHHHHHCcCChhHCcCH-----HHHhcCHhhCcCCC
Confidence                 2478999999999999999999985     99999999987544

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.10  E-value=2.5e-12  Score=116.66  Aligned_cols=106  Identities=22%  Similarity=0.324  Sum_probs=82.3

Q ss_pred             CCCceehH--------hhhcCCCCCCC---CCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTA---DNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~---~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      +|+..+|+        +|++|.+||.+   .+..+++..|....+.++    ..++.++++||++||.+||.+|+++   
T Consensus       196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~---  272 (342)
T 2qr7_A          196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTA---  272 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCH---
T ss_pred             CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCH---
Confidence            35666774        88999999985   567888889988877665    4689999999999999999999985   


Q ss_pred             CchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccC
Q psy1025          82 DGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQ  129 (258)
Q Consensus        82 g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~  129 (258)
                        .+|++||||.  +|+.+..+.+.+|+.|......+...|+..++..
T Consensus       273 --~~il~hp~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  316 (342)
T 2qr7_A          273 --ALVLRHPWIV--HWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQ  316 (342)
T ss_dssp             --HHHTTSHHHH--TGGGSCCSCCCCCCCHHHHHHHHHHHHHHHTTTC
T ss_pred             --HHHhcCCeec--CccccccccCCCccchhhhhhHHHHHHhhhcccC
Confidence              9999999995  7999988888888887643222233444444333

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.09  E-value=6.4e-11  Score=111.26  Aligned_cols=79  Identities=19%  Similarity=0.280  Sum_probs=68.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |||.+   .+|+..+|+        +|++|++||.+.+..+++..|....   +..+..+|+++++||.+||.+||.+|+
T Consensus       317 Evl~~---~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  393 (423)
T 4fie_A          317 ELISR---LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA  393 (423)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHCC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCc
Confidence            77774   578999994        9999999999999999999988653   344567999999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     +||++||||+.
T Consensus       394 ta-----~ell~Hp~~~~  406 (423)
T 4fie_A          394 TA-----AELLKHPFLAK  406 (423)
T ss_dssp             CH-----HHHTTCGGGGG
T ss_pred             CH-----HHHhcCHHhcC
Confidence            85     99999999975

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.08  E-value=8.1e-11  Score=108.12  Aligned_cols=37  Identities=32%  Similarity=0.604  Sum_probs=33.9

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      .+|++++|||++||+.||.+|+++     +|+++||||++|+
T Consensus       324 ~is~~a~DLl~~lL~~dP~~R~ta-----~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          324 EVPDEAYDLLDKLLDLNPASRITA-----EEALLHPFFKDMS  360 (361)
T ss_dssp             TCCHHHHHHHHHHTCSCTTTSCCH-----HHHHTSGGGTTC-
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCH-----HHHhcCcccCCCC
Confidence            589999999999999999999985     9999999999875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.07  E-value=9.6e-11  Score=107.20  Aligned_cols=89  Identities=22%  Similarity=0.341  Sum_probs=77.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.++    ..++.++++||.+||.+||.+|
T Consensus       188 E~~~~---~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  264 (361)
T 2yab_A          188 EIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKR  264 (361)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             hHHcC---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHC
Confidence            56663   468888884        88999999999999999999999888776    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRK  104 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~  104 (258)
                      +++     +++++||||.+++|.....+.
T Consensus       265 ~t~-----~e~l~hp~~~~~~~~~~~~~~  288 (361)
T 2yab_A          265 LTI-----QEALRHPWITPVDTQQAMVRR  288 (361)
T ss_dssp             CCH-----HHHHTSTTTSCSSHHHHHHHH
T ss_pred             cCH-----HHHhcCcCcCCCchhhhhhcc
Confidence            985     999999999999998765443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.98  E-value=5.6e-10  Score=100.55  Aligned_cols=83  Identities=20%  Similarity=0.310  Sum_probs=71.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++.++|+        +|++|.+||.+.+...+...|....+.+|..++.++.+||++||..||.+|+++ 
T Consensus       183 E~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~-  259 (328)
T 3fe3_A          183 ELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL-  259 (328)
T ss_dssp             HHHHTC--CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCH-
T ss_pred             ccccCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCH-
Confidence            566652  223467773        889999999999999999999999999999999999999999999999999985 


Q ss_pred             CCCchhhccCCccccCCh
Q psy1025          80 PNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW   97 (258)
                          ++|++||||....+
T Consensus       260 ----~eil~h~~~~~~~~  273 (328)
T 3fe3_A          260 ----EQIMKDRWINAGHE  273 (328)
T ss_dssp             ----HHHTTCTTTTTTCT
T ss_pred             ----HHHhcCHhhcCCCc
Confidence                99999999986543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.96  E-value=2.8e-10  Score=104.06  Aligned_cols=97  Identities=21%  Similarity=0.249  Sum_probs=70.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL---------------------------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~---------------------------   52 (258)
                      |++.+  ...|+.++|+        +|++|++||.+.+....+..|+.. +.+                           
T Consensus       200 E~~~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (388)
T 3oz6_A          200 EILLG--STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV-IDFPSNEDVESIQSPFAKTMIESLKEKVEI  276 (388)
T ss_dssp             HHHTT--CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-
T ss_pred             HHhcC--CCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-cCCCCHHHHHhccCHHHHHHHHhCcccccc
Confidence            66765  3568888984        889999999999888877776531 111                           


Q ss_pred             ---------------------CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc---CChhhhhcCCCCCC
Q psy1025          53 ---------------------PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS---INWSDVLSRKLEPP  108 (258)
Q Consensus        53 ---------------------P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~---idW~~l~~r~~~pP  108 (258)
                                           +..+++++++||.+||..||.+|+++     +++++||||..   .+|+.+..+.+.+|
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~-----~e~l~Hp~~~~~~~~~~~~~~~~~~~~~  351 (388)
T 3oz6_A          277 RQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA-----NDALKHPFVSIFHNPNEEPNCDHIITIP  351 (388)
T ss_dssp             ----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSTTTTTTCCGGGCCCCSSCCCCC
T ss_pred             cCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH-----HHHhCCHHHHHhcCCccCCCCCCCCCCC
Confidence                                 12578999999999999999999985     99999999764   45555544555555


Q ss_pred             CcCc
Q psy1025         109 FKPS  112 (258)
Q Consensus       109 f~P~  112 (258)
                      |.+.
T Consensus       352 ~~~~  355 (388)
T 3oz6_A          352 INDN  355 (388)
T ss_dssp             ----
T ss_pred             cccc
Confidence            5543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.88  E-value=1.4e-09  Score=97.23  Aligned_cols=78  Identities=13%  Similarity=0.304  Sum_probs=62.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~-~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      ||+.+    .|+..+|+        +|++|++||.+ .+...++..|....  ..+|..+++++++||.+||.+||.+|+
T Consensus       200 E~~~~----~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  275 (290)
T 3fpq_A          200 EMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  275 (290)
T ss_dssp             GGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHcCC----CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCc
Confidence            67764    48888983        99999999976 45566777776653  345567899999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     ++|++||||+.
T Consensus       276 s~-----~e~l~Hp~~~~  288 (290)
T 3fpq_A          276 SI-----KDLLNHAFFQE  288 (290)
T ss_dssp             CH-----HHHHTSGGGC-
T ss_pred             CH-----HHHhcCccccC
Confidence            75     99999999973

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.87  E-value=2.1e-09  Score=96.01  Aligned_cols=89  Identities=17%  Similarity=0.285  Sum_probs=72.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+....+..|......++    ..++.++++||.+||..||.+|
T Consensus       203 E~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  279 (327)
T 3lm5_A          203 EILNY---DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR  279 (327)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             eeecC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhC
Confidence            55553   457777883        88899999999999988888887665554    3589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRK  104 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~  104 (258)
                      +++     ++|++||||++++|+.+....
T Consensus       280 pt~-----~~ll~h~~~~~~~~~~~~~~~  303 (327)
T 3lm5_A          280 PTA-----EICLSHSWLQQWDFENLFHPE  303 (327)
T ss_dssp             CCH-----HHHTTCGGGCCCCTTCC----
T ss_pred             cCH-----HHHhCCHhhcccccccccCcc
Confidence            985     999999999999999775433

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.86  E-value=8.1e-10  Score=100.80  Aligned_cols=74  Identities=18%  Similarity=0.156  Sum_probs=63.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL---ILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~---~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      ||+.|   ..|+..+|+        +|++|++||.+.+...++.+|....+   .+|+.+++++++||.+||.+||.+|+
T Consensus       226 E~~~~---~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  302 (336)
T 4g3f_A          226 EVVMG---KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRA  302 (336)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHCC---CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCc
Confidence            77885   578889994        99999999999888888899988764   46788999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     .||++|
T Consensus       303 sa-----~el~~~  310 (336)
T 4g3f_A          303 SA-----MELRRK  310 (336)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            75     887654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.81  E-value=2.7e-09  Score=95.28  Aligned_cols=84  Identities=17%  Similarity=0.304  Sum_probs=65.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----C-------------CCC--------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----L-------------ILP--------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----~-------------~~P--------   53 (258)
                      |++.+  ...|+.++|+        +|++|.+||.+.+.......|....     .             .+|        
T Consensus       207 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
T 3gbz_A          207 EILLG--SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLK  284 (329)
T ss_dssp             HHHTT--CCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHH
T ss_pred             HHhcC--CCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHh
Confidence            56664  2347888883        8889999999988887777765320     0             011        


Q ss_pred             ----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          54 ----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        54 ----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                          ..++.++++||.+||..||.+|+++     +++++||||.+++|+
T Consensus       285 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          285 RVLGALLDDEGLDLLTAMLEMDPVKRISA-----KNALEHPYFSHNDFD  328 (329)
T ss_dssp             HHHGGGSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSSSCSC
T ss_pred             hhcccccCHHHHHHHHHHccCChhhCCCH-----HHHhCCcccCCCCCC
Confidence                1178999999999999999999985     999999999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.77  E-value=3.4e-09  Score=97.50  Aligned_cols=86  Identities=23%  Similarity=0.343  Sum_probs=67.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----------------CCC-----------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----------------KLI-----------   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----------------~~~-----------   51 (258)
                      |++.+  ...|+.++|+        +|++|.+||.+.+....+..|...                 ...           
T Consensus       211 E~~~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (394)
T 4e7w_A          211 ELIFG--ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSK  288 (394)
T ss_dssp             HHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHH
T ss_pred             HHHcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHH
Confidence            56654  3468888884        889999999998887766665431                 011           


Q ss_pred             -CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          52 -LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        52 -~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                       ++..+++++++||.+||..||.+|+++     .++++||||..+.|...
T Consensus       289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~~~  333 (394)
T 4e7w_A          289 VFRPRTPPDAIDLISRLLEYTPSARLTA-----IEALCHPFFDELRTGEA  333 (394)
T ss_dssp             HSCTTCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGSTTTSSCC
T ss_pred             hccccCCHHHHHHHHHHhCCChhhCCCH-----HHHhcChhhhhhccccc
Confidence             233588999999999999999999985     99999999999888643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.77  E-value=6.7e-09  Score=92.85  Aligned_cols=88  Identities=22%  Similarity=0.329  Sum_probs=74.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.++    ..++.++++||.+||..||.+|
T Consensus       187 E~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  263 (326)
T 2y0a_A          187 EIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR  263 (326)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             eeecC---CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhC
Confidence            55553   457777883        88899999999999999999888777665    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSR  103 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r  103 (258)
                      +++     .++++||||...+|.....+
T Consensus       264 pt~-----~e~l~hp~~~~~~~~~~~~~  286 (326)
T 2y0a_A          264 MTI-----QDSLQHPWIKPKDTQQALSR  286 (326)
T ss_dssp             CCH-----HHHHHSTTTSCCSHHHHHHH
T ss_pred             CCH-----HHHhcCCCccCCcchhhhhh
Confidence            985     99999999999999876543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.75  E-value=6.8e-09  Score=90.19  Aligned_cols=91  Identities=27%  Similarity=0.507  Sum_probs=73.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|.        +|++|.+||...+.......|....+.+|..++.++++||.+||..||.+|+++ 
T Consensus       182 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-  257 (284)
T 2vgo_A          182 EMIEG---KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPL-  257 (284)
T ss_dssp             HHHTT---CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-
T ss_pred             HHhcc---CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCH-
Confidence            55554   345666773        888999999999998889999998899999999999999999999999999985 


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                          ++|++||||+...      +++.||..+.
T Consensus       258 ----~~ll~h~~~~~~~------~~~~p~~~~~  280 (284)
T 2vgo_A          258 ----KGVMEHPWVKANS------RRVLPPVYQS  280 (284)
T ss_dssp             ----HHHHTCHHHHHHC------CCCCCCCC--
T ss_pred             ----HHHhhCHHHHhhc------cccCCCcccc
Confidence                9999999997422      4455665543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.72  E-value=8.7e-09  Score=91.96  Aligned_cols=87  Identities=16%  Similarity=0.288  Sum_probs=71.2

Q ss_pred             ccccCCCCCCCCc-eehH--------hhhcCCCCCCCCCH-HHHHHHHHcCCCCCC-------------------CCCCH
Q psy1025           8 SIVRNQKDTAHTK-AERN--------ILEAVKPPFTADNR-KKTIEKILRGKLILP-------------------PYLTP   58 (258)
Q Consensus         8 EIi~~~~~~gh~~-~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~~~~P-------------------~~~S~   58 (258)
                      |++.+  ...|+. .+|+        +|++|.+||...+. ..++..|....+.+|                   ..++.
T Consensus       220 E~~~~--~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (348)
T 2pml_X          220 EFFSN--ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSN  297 (348)
T ss_dssp             GGGSS--CCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCH
T ss_pred             hhhcC--CCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCH
Confidence            56664  224444 6673        88899999988766 788888888877777                   56899


Q ss_pred             HHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhh
Q psy1025          59 DARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        59 ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                      ++++||.+||..||.+|+++     .++++||||.+++|..+.
T Consensus       298 ~l~~li~~~L~~dP~~Rps~-----~e~l~hp~f~~~~~~~~~  335 (348)
T 2pml_X          298 EDIDFLKLFLRKNPAERITS-----EDALKHEWLADTNIEDLR  335 (348)
T ss_dssp             HHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGTTCCHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCH-----HHHhcCccccCCCHHHHH
Confidence            99999999999999999985     999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.72  E-value=4.5e-09  Score=93.25  Aligned_cols=84  Identities=14%  Similarity=0.260  Sum_probs=63.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc---CC--CC-----------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR---GK--LI-----------------------   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~---~~--~~-----------------------   51 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+.......|..   ..  ..                       
T Consensus       189 E~~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (311)
T 3niz_A          189 DVLMG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPW  266 (311)
T ss_dssp             HHHTT--CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCH
T ss_pred             HHhcC--CCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcH
Confidence            55654  2457888883        88899999987766655555543   10  00                       


Q ss_pred             --CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          52 --LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        52 --~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                        +...++.++++||.+||..||.+|+++     +++++||||++++++
T Consensus       267 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~  310 (311)
T 3niz_A          267 SSIIPGFCQEGIDLLSNMLCFDPNKRISA-----RDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTSCTT
T ss_pred             HHhCcccCHHHHHHHHHHcCCChhHCCCH-----HHHhcCcccccCCcc
Confidence              112478899999999999999999985     999999999999875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.70  E-value=8.4e-09  Score=91.54  Aligned_cols=88  Identities=23%  Similarity=0.334  Sum_probs=74.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|.        +|++|..||.+.+...+...|....+.++    ..++.++++||.+||..||.+|
T Consensus       188 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  264 (321)
T 2a2a_A          188 EIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKR  264 (321)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTS
T ss_pred             ccccC---CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhC
Confidence            45553   356777773        88899999999999999999988777665    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSR  103 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r  103 (258)
                      +++     +++++||||.+++|.....+
T Consensus       265 ps~-----~e~l~hp~~~~~~~~~~~~~  287 (321)
T 2a2a_A          265 LTI-----QEALRHPWITPVDNQQAMVR  287 (321)
T ss_dssp             CCH-----HHHHHSTTTSCSSHHHHHHH
T ss_pred             cCH-----HHHhcCccccCCCccccccc
Confidence            985     99999999999999876544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.69  E-value=1.5e-08  Score=94.12  Aligned_cols=84  Identities=21%  Similarity=0.294  Sum_probs=65.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc-----------------CCCCC----------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR-----------------GKLIL----------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~-----------------~~~~~----------   52 (258)
                      |++.+  ...|+..+|+        +|++|++||.+.+....+..|+.                 ..+.+          
T Consensus       226 E~~~~--~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~  303 (420)
T 1j1b_A          226 ELIFG--ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK  303 (420)
T ss_dssp             HHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHH
T ss_pred             HHHcC--CCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHH
Confidence            56664  3468888884        89999999999887776666543                 11222          


Q ss_pred             --CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          53 --PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        53 --P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                        +..++.++++||.+||..||.+|+++     .++++||||..+.|.
T Consensus       304 ~~~~~~~~~~~~Li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          304 VFRPRTPPEAIALCSRLLEYTPTARLTP-----LEACAHSFFDELRDP  346 (420)
T ss_dssp             HSCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGGGGCT
T ss_pred             hcCCCCCHHHHHHHHHhccCChhHCCCH-----HHHhCCHhhcccccc
Confidence              34578999999999999999999985     999999999876654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.67  E-value=1.8e-08  Score=94.09  Aligned_cols=52  Identities=23%  Similarity=0.388  Sum_probs=43.7

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      .++.++++||.+||..||.+|+++     +++++||||.+++|..+......++..|
T Consensus       368 ~~s~~~~dLl~~mL~~dP~~R~t~-----~e~L~Hp~f~~~~~~~~e~~~~~~~~~~  419 (458)
T 3rp9_A          368 ASSADAIHLLKRMLVFNPNKRITI-----NECLAHPFFKEVRIAEVETNATEKVRLP  419 (458)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred             CCCHHHHHHHHHHhccCccccCCH-----HHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence            469999999999999999999985     9999999999999998765544444443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.67  E-value=1.4e-08  Score=90.16  Aligned_cols=86  Identities=15%  Similarity=0.194  Sum_probs=64.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C----------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K----------------------------   49 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~----------------------------   49 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+.......|...  .                            
T Consensus       178 E~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (317)
T 2pmi_A          178 DVLMG--SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLR  255 (317)
T ss_dssp             HHHTT--CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSH
T ss_pred             hHhhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHH
Confidence            56654  2457788883        889999999998888877766531  0                            


Q ss_pred             ----CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          50 ----LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        50 ----~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                          ...+..++.++++||.+||..||.+|+++     +++++||||....|...
T Consensus       256 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~~~  305 (317)
T 2pmi_A          256 QVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA-----KQALHHPWFAEYYHHAS  305 (317)
T ss_dssp             HHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGGGGCC---
T ss_pred             HhhcccccccCCHHHHHHHHHHCCCCcccCCCH-----HHHhCChhhhcccchhh
Confidence                00122578899999999999999999985     99999999998877643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.65  E-value=1.5e-08  Score=88.92  Aligned_cols=94  Identities=20%  Similarity=0.301  Sum_probs=62.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC-------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP-------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P-------   53 (258)
                      |++.+  ...++..+|.        +|++|.+||.+.+.......+...                   ....|       
T Consensus       172 E~~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (311)
T 4agu_A          172 ELLVG--DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEP  249 (311)
T ss_dssp             HHHHT--CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCC
T ss_pred             HHHhc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccch
Confidence            55554  2457778883        888999999988877665554321                   01111       


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCC
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPP  108 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pP  108 (258)
                           ..++.++.+||.+||..||.+|+++     ++|++||||+++.|.....+....|
T Consensus       250 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~~~~~~~~~~  304 (311)
T 4agu_A          250 LELKFPNISYPALGLLKGCLHMDPTERLTC-----EQLLHHPYFENIREIEDLAKEHDKP  304 (311)
T ss_dssp             HHHHCTTCCHHHHHHHHHHCCSSTTTSCCH-----HHHHTSGGGTTCC------------
T ss_pred             hhhhcccccHHHHHHHHHHccCChhhcCCH-----HHHhcChHHHhccCHHHHHHhhccH
Confidence                 2578899999999999999999985     9999999999999887665555443

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.64  E-value=7.8e-09  Score=91.94  Aligned_cols=93  Identities=14%  Similarity=0.167  Sum_probs=63.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC--------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP--------------------------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P--------------------------   53 (258)
                      |++.+   ..|+..+|+        +|++|.+||...+.......+....-.+|                          
T Consensus       209 E~~~~---~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (355)
T 2eu9_A          209 EVILE---LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSD  285 (355)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHH
T ss_pred             eeeec---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccch
Confidence            56664   457778883        88899999998877665544432111111                          


Q ss_pred             ------------------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCC
Q psy1025          54 ------------------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPP  108 (258)
Q Consensus        54 ------------------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pP  108 (258)
                                        ...+.++++||.+||..||.+|+++     .+|++||||.+++|+....+....|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~~~~~~~~~~p  353 (355)
T 2eu9_A          286 GRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL-----AEALLHPFFAGLTPEERSFHTSRNP  353 (355)
T ss_dssp             HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH-----HHHTTSGGGGGCCHHHHC-------
T ss_pred             hccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcCCChhhccccccCCC
Confidence                              0124578899999999999999985     9999999999999987755544433

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.64  E-value=8.7e-09  Score=93.99  Aligned_cols=86  Identities=15%  Similarity=0.249  Sum_probs=58.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-----------------------------   50 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-----------------------------   50 (258)
                      |++.+. ...|+..+|+        +|++|.+||.+.+....+..++...+                             
T Consensus       205 E~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (389)
T 3gni_B          205 EVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD  283 (389)
T ss_dssp             HHHSTT-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------
T ss_pred             HHHhcc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccccc
Confidence            566642 2467888883        88899999987655444443332211                             


Q ss_pred             -----------------CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          51 -----------------ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        51 -----------------~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                                       .++..++.++++||.+||..||.+|+++     .++++||||+.+.|..
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta-----~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          284 SLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFKQIKRRA  344 (389)
T ss_dssp             ----------------------CCHHHHHHHHHHTCSCTTTSCCH-----HHHTTSGGGGGC---C
T ss_pred             ccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH-----HHHhcCHHHHHHhhcc
Confidence                             2345689999999999999999999985     9999999999988753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.62  E-value=2e-08  Score=94.33  Aligned_cols=79  Identities=25%  Similarity=0.458  Sum_probs=68.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|.        +|++|.+||.+.+...++..|....+.+|.    .+++++++||.+||..||.+|
T Consensus       183 E~l~~---~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  259 (444)
T 3soa_A          183 EVLRK---DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKR  259 (444)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             HHhcC---CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence            56654   467888883        889999999999999999999998877764    589999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     .++++||||..
T Consensus       260 pta-----~e~L~hp~~~~  273 (444)
T 3soa_A          260 ITA-----AEALKHPWISH  273 (444)
T ss_dssp             CCH-----HHHHHSCTTHH
T ss_pred             CCH-----HHHhcCccccC
Confidence            985     99999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.62  E-value=2.2e-08  Score=91.19  Aligned_cols=79  Identities=22%  Similarity=0.388  Sum_probs=68.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|....+.+|.    .++.++++||.+||..||.+|
T Consensus       200 E~~~~---~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  276 (362)
T 2bdw_A          200 EVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR  276 (362)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHcc---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhC
Confidence            55553   467888883        889999999999999999999998887764    479999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     .++++||||..
T Consensus       277 ~t~-----~e~l~hp~~~~  290 (362)
T 2bdw_A          277 ITA-----DQALKVPWICN  290 (362)
T ss_dssp             CCH-----HHHTTSHHHHT
T ss_pred             cCH-----HHHhcCcccCC
Confidence            985     99999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.61  E-value=1.8e-08  Score=95.71  Aligned_cols=80  Identities=21%  Similarity=0.374  Sum_probs=69.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++..+|+        +|++|.+||.+.+...++.+|..+.+..|..++.++++||.+||..||.+|+++ 
T Consensus       185 E~~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~-  261 (476)
T 2y94_A          185 EVISGR--LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATI-  261 (476)
T ss_dssp             HHHTTC--CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-
T ss_pred             hhccCC--CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCH-
Confidence            566642  223567773        889999999999999999999999889999999999999999999999999985 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          ++|++||||..
T Consensus       262 ----~eil~hp~~~~  272 (476)
T 2y94_A          262 ----KDIREHEWFKQ  272 (476)
T ss_dssp             ----HHHHTCHHHHT
T ss_pred             ----HHHHhCHHhhh
Confidence                99999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.59  E-value=1.8e-08  Score=94.78  Aligned_cols=83  Identities=20%  Similarity=0.349  Sum_probs=69.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+    .|+..+|.        +|++|.+||.+.+...++..|....+.++    ..++.++++||.+||..||.+|
T Consensus       198 E~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  273 (484)
T 3nyv_A          198 EVLHG----TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMR  273 (484)
T ss_dssp             HHHHT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred             eeecC----CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence            56654    47777873        88999999999999999999998876654    3589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +++     .++++||||+...++.
T Consensus       274 ~s~-----~e~l~h~~~~~~~~~~  292 (484)
T 3nyv_A          274 ISA-----RDALDHEWIQTYTKEQ  292 (484)
T ss_dssp             CCH-----HHHHTSHHHHHHTC--
T ss_pred             cCH-----HHHhhChhhccccccc
Confidence            985     9999999998766543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.59  E-value=2.6e-08  Score=87.02  Aligned_cols=69  Identities=26%  Similarity=0.410  Sum_probs=63.4

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +|++|..||.+.+...++..|....+.+|..++.++.+||.+||..||.+|+++     .+|++||||....+.
T Consensus       205 ~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          205 NITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSI-----RQIRQHSWFRKKHPP  273 (305)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCH-----HHHHHSHHHHSCCCC
T ss_pred             HHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCH-----HHHhcCcccccCCCC
Confidence            888999999999999999999999888999999999999999999999999985     999999999876543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.59  E-value=3e-08  Score=85.88  Aligned_cols=79  Identities=29%  Similarity=0.473  Sum_probs=69.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|.        +|++|.+||...+....+..|......+|..++.++++||.+||..||.+|+++ 
T Consensus       177 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-  252 (279)
T 3fdn_A          177 EMIEG---RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML-  252 (279)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCH-
T ss_pred             hHhcc---CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCH-
Confidence            45553   345666673        888999999999999999999999999999999999999999999999999985 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          ++|++||||..
T Consensus       253 ----~e~l~h~~~~~  263 (279)
T 3fdn_A          253 ----REVLEHPWITA  263 (279)
T ss_dssp             ----HHHHHCHHHHH
T ss_pred             ----HHHhhCccccC
Confidence                99999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.59  E-value=3.2e-08  Score=86.62  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=65.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+.....++..+|.        +|++|.+||.+.+...+...|....+.+|.  .++.++++||.+||..||.+|++
T Consensus       207 E~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s  286 (298)
T 2zv2_A          207 ESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV  286 (298)
T ss_dssp             GGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC
T ss_pred             hhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC
Confidence            55654322223566673        888999999999888888888887777664  68999999999999999999998


Q ss_pred             CCCCCchhhccCCccc
Q psy1025          78 SGPNDGEAVRVHPFFR   93 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~   93 (258)
                      +     .+|++||||.
T Consensus       287 ~-----~e~l~hp~~~  297 (298)
T 2zv2_A          287 V-----PEIKLHPWVT  297 (298)
T ss_dssp             H-----HHHTTCHHHH
T ss_pred             H-----HHHhcCcccc
Confidence            5     9999999995

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.58  E-value=2.9e-08  Score=89.85  Aligned_cols=96  Identities=23%  Similarity=0.284  Sum_probs=66.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C------------------------CC--
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K------------------------LI--   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~------------------------~~--   51 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+....+..|...  .                        ..  
T Consensus       201 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (364)
T 3qyz_A          201 EIMLN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP  278 (364)
T ss_dssp             HHHHT--BCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCC
T ss_pred             HHhcC--CCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCC
Confidence            44443  3457888883        888999999988776666655421  0                        00  


Q ss_pred             ---CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          52 ---LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        52 ---~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                         ++..++.++++||.+||..||.+|+++     .++++||||... |+........+||.+
T Consensus       279 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~~~~~-~~~~~~~~~~~~~~~  335 (364)
T 3qyz_A          279 WNRLFPNADSKALDLLDKMLTFNPHKRIEV-----EQALAHPYLEQY-YDPSDEPIAEAPFKF  335 (364)
T ss_dssp             HHHHCTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGTTT-CCGGGSCCCSSCCCC
T ss_pred             HHHhCCCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcchhhc-cCcccccCCCCcCCc
Confidence               113578999999999999999999985     999999999875 443333333344443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.58  E-value=5e-08  Score=84.36  Aligned_cols=85  Identities=20%  Similarity=0.340  Sum_probs=70.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++...|.        +|++|.+||.+.+...+...+....+.+|.    .+++++++||.+||..||.+|
T Consensus       177 E~~~~---~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (284)
T 3kk8_A          177 EVLKK---DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR  253 (284)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             hhhcC---CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhC
Confidence            55553   356777773        888999999999999999999888776663    689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +++     +++++||||.+..+...
T Consensus       254 ps~-----~~~l~h~~~~~~~~~~~  273 (284)
T 3kk8_A          254 ITA-----DQALKVPWICNRERVAS  273 (284)
T ss_dssp             CCH-----HHHTTSHHHHSCCCGGG
T ss_pred             CCH-----HHHhcCccccCChhHHh
Confidence            985     99999999998776543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.58  E-value=1.5e-08  Score=92.66  Aligned_cols=85  Identities=22%  Similarity=0.328  Sum_probs=70.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+....+..|+...+.++    ..++.++++||.+||..||.+|
T Consensus       258 E~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          258 EVVNY---DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             HHHTT---CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             hhccC---CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhC
Confidence            45543   356777773        88999999999999999999988776655    3689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +++     .++++||||.+..|...
T Consensus       335 ps~-----~e~l~hp~~~~~~~~~~  354 (373)
T 2x4f_A          335 ISA-----SEALKHPWLSDHKLHSR  354 (373)
T ss_dssp             CCH-----HHHHHSHHHHCHHHHHH
T ss_pred             CCH-----HHHhcCcCcCCCchhhh
Confidence            985     99999999998877644

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.58  E-value=1.5e-08  Score=92.11  Aligned_cols=96  Identities=17%  Similarity=0.274  Sum_probs=69.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC----------------------CC-----
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL----------------------IL-----   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~----------------------~~-----   52 (258)
                      |++.+   ..|+..+|.        +|++|.+||.+.+....+..|+...-                      .+     
T Consensus       196 E~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (371)
T 2xrw_A          196 EVILG---MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  272 (371)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCH
T ss_pred             HHhcC---CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccch
Confidence            66664   457778883        88999999999888887777764311                      11     


Q ss_pred             ---------CCC------CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcC
Q psy1025          53 ---------PPY------LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSL  113 (258)
Q Consensus        53 ---------P~~------~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~  113 (258)
                               |..      .+.++++||.+||..||.+|+++     +++++||||..  |.........||.+|..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~--~~~~~~~~~~~~~~~~~  341 (371)
T 2xrw_A          273 EKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-----DEALQHPYINV--WYDPSEAEAPPPKIPDK  341 (371)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH-----HHHHHSHHHHT--TCCHHHHTCCCCCCCTT
T ss_pred             hhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH-----HHHhCCcchhh--hcCccccCCCCCCCCCh
Confidence                     110      15689999999999999999985     99999999984  43333345666676653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.58  E-value=3.9e-08  Score=87.55  Aligned_cols=84  Identities=24%  Similarity=0.332  Sum_probs=64.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---C--C--------------CC--------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---K--L--------------IL--------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~--~--------------~~--------   52 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+.......|...   .  .              .+        
T Consensus       170 E~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (324)
T 3mtl_A          170 DILLG--STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEAL  247 (324)
T ss_dssp             HHHTT--CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCH
T ss_pred             hhhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhh
Confidence            56654  3467888883        888999999998888777766541   0  0              11        


Q ss_pred             ---CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          53 ---PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        53 ---P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                         +..++.++++||.+||..||.+|+++     +++++||||.++.+.
T Consensus       248 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          248 LSHAPRLDSDGADLLTKLLQFEGRNRISA-----EDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGGGGCST
T ss_pred             hhhcCCCCHHHHHHHHHHcCcCcccCCCH-----HHHhcChhhhhcccc
Confidence               12478899999999999999999985     999999999976644

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.57  E-value=3.3e-08  Score=88.09  Aligned_cols=85  Identities=25%  Similarity=0.382  Sum_probs=70.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+. ...++..+|.        +|++|.+||.+.+.......++.....++.    .++.++++||.+||..||.+|
T Consensus       244 E~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  322 (345)
T 3hko_A          244 EVLNTT-NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER  322 (345)
T ss_dssp             HHHTCS-SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred             hhhccC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHC
Confidence            555532 2457778883        889999999999999998998887766553    489999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +++     .++++||||..+.|.
T Consensus       323 ps~-----~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          323 FDA-----MRALQHPWISQFSDK  340 (345)
T ss_dssp             CCH-----HHHHHSHHHHTTSSC
T ss_pred             CCH-----HHHhcChhhccChHh
Confidence            985     999999999987654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.56  E-value=4.6e-08  Score=90.19  Aligned_cols=82  Identities=20%  Similarity=0.358  Sum_probs=68.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+...++..|....+.++    ..++.++++||.+||.+||.+|
T Consensus       220 E~~~~---~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  296 (387)
T 1kob_A          220 EIVDR---EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR  296 (387)
T ss_dssp             HHHTT---CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             hhccC---CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence            56654   457777883        88999999999999899999888766654    3589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCCh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +++     .++++||||.+..+
T Consensus       297 pt~-----~ell~hp~~~~~~~  313 (387)
T 1kob_A          297 LTV-----HDALEHPWLKGDHS  313 (387)
T ss_dssp             CCH-----HHHHTSTTTSSCCT
T ss_pred             cCH-----HHHhhCccccCCcc
Confidence            985     99999999997654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.56  E-value=8e-08  Score=89.36  Aligned_cols=44  Identities=18%  Similarity=0.407  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhc
Q psy1025          54 PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLS  102 (258)
Q Consensus        54 ~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~  102 (258)
                      +.+++++++||.+||..||.+|+++     +++++||||.+++|..+..
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITI-----DQALDHPYLKDVRKKKLEN  375 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTCGGGTTTCCTTTC-
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCH-----HHHhcChhhhhccCcccCc
Confidence            3589999999999999999999984     9999999999999987643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.55  E-value=5.7e-08  Score=84.71  Aligned_cols=82  Identities=17%  Similarity=0.230  Sum_probs=61.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--CC---------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--KL---------------------------   50 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~~---------------------------   50 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+.......|...  ..                           
T Consensus       170 E~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T 1ob3_A          170 DVLMG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWE  247 (288)
T ss_dssp             HHHTT--CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGG
T ss_pred             hheeC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHH
Confidence            56654  2457788883        889999999998887777666431  00                           


Q ss_pred             CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          51 ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        51 ~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      .++..++.++++||.+||..||.+|+++     +++++||||++.|
T Consensus       248 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~n  288 (288)
T 1ob3_A          248 SFLKGLDESGIDLLSKMLKLDPNQRITA-----KQALEHAYFKENN  288 (288)
T ss_dssp             GTCCSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGGC--
T ss_pred             HHhhhcCHHHHHHHHHHcCCCcccCCCH-----HHHhcCcchhhcC
Confidence            0123478999999999999999999985     9999999998653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.55  E-value=4.7e-08  Score=86.53  Aligned_cols=39  Identities=26%  Similarity=0.529  Sum_probs=34.5

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      ++.++++||.+||..||.+|+++     +++++||||.++.|++
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta-----~e~l~hp~f~~~~~~~  330 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTA-----REAMEHPYFYTVVKDQ  330 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCH-----HHHHTSGGGTTCC---
T ss_pred             CCHHHHHHHHHHhcCCcccCCCH-----HHHhcCccHhhhccCC
Confidence            79999999999999999999985     9999999999998873

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.55  E-value=4.9e-08  Score=85.88  Aligned_cols=77  Identities=31%  Similarity=0.421  Sum_probs=59.7

Q ss_pred             CCceeh--------HhhhcCCCCCCCCC---------------HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhc
Q psy1025          18 HTKAER--------NILEAVKPPFTADN---------------RKKTIEKILRGKLILPP----YLTPDARELIRKLLKR   70 (258)
Q Consensus        18 h~~~vD--------~~ml~G~pPF~~~~---------------~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~k   70 (258)
                      |+..+|        |+|++|.+||.+.+               ...++..|....+.+|.    .++.++++||.+||..
T Consensus       203 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  282 (316)
T 2ac3_A          203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVR  282 (316)
T ss_dssp             HTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCS
T ss_pred             CCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhC
Confidence            455667        38899999998754               35567788888888873    6899999999999999


Q ss_pred             ccccccCCCCCCchhhccCCccccCChhh
Q psy1025          71 QVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        71 dP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      ||.+|+++     .++++||||.+..|+.
T Consensus       283 dP~~Rps~-----~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          283 DAKQRLSA-----AQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             STTTSCCH-----HHHHHSTTCC------
T ss_pred             ChhhCCCH-----HHHhcChhhcCCCCcc
Confidence            99999985     9999999999887764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.55  E-value=1.6e-08  Score=90.35  Aligned_cols=79  Identities=18%  Similarity=0.376  Sum_probs=67.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|.        +|++|.+||.+.+...++..|....+.++.    .++.++++||.+||..||.+|
T Consensus       173 E~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T 1tki_A          173 EVHQH---DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             HHHTT---CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhcC---CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHC
Confidence            55553   346777773        889999999999999999999998887763    689999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     .++++||||..
T Consensus       250 pt~-----~e~l~hp~~~~  263 (321)
T 1tki_A          250 MTA-----SEALQHPWLKQ  263 (321)
T ss_dssp             CCH-----HHHHHSHHHHS
T ss_pred             cCH-----HHHhcChhhcc
Confidence            985     99999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.55  E-value=4.6e-08  Score=87.67  Aligned_cols=84  Identities=21%  Similarity=0.193  Sum_probs=63.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCC------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPY------------------------   55 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~------------------------   55 (258)
                      |++.+  ...|+.++|+        +|++|.+||.+.+.......|......++..                        
T Consensus       198 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (351)
T 3mi9_A          198 ELLLG--ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV  275 (351)
T ss_dssp             HHHTT--CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCH
T ss_pred             hhhcC--CCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCH
Confidence            55654  2457788883        8899999999988888777765422111111                        


Q ss_pred             --------CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          56 --------LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        56 --------~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                              .++++++||.+||..||.+|+++     +++++||||....+.
T Consensus       276 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          276 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDS-----DDALNHDFFWSDPMP  321 (351)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGSSSCC
T ss_pred             HHHhhhccCChHHHHHHHHHhcCChhhCCCH-----HHHhCCCCcCCCCCc
Confidence                    27789999999999999999985     999999999865443

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.55  E-value=1.5e-08  Score=94.78  Aligned_cols=102  Identities=20%  Similarity=0.200  Sum_probs=68.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKLIL---PPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~~~---P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+.....++.++|+        +|++ |.+||...........+.......   +...+..+++||.+||..||.+|
T Consensus       196 E~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  275 (432)
T 3p23_A          196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKR  275 (432)
T ss_dssp             GGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGS
T ss_pred             hhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhC
Confidence            66765434567778884        7788 999997654444322222222211   12346678999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCCh---------hhhhcCCCCCCCcCcCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINW---------SDVLSRKLEPPFKPSLT  114 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW---------~~l~~r~~~pPf~P~~~  114 (258)
                      +++     ++|++||||.+++|         +.+......+|+++.+.
T Consensus       276 ps~-----~evl~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  318 (432)
T 3p23_A          276 PSA-----KHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGPIVKQLE  318 (432)
T ss_dssp             CCH-----HHHHTSTTTCCHHHHHHHHHHHHHHCSCSCSSCHHHHHHH
T ss_pred             CCH-----HHHHhCccccChHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence            985     99999999999998         44555566677776553

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.54  E-value=2e-08  Score=91.66  Aligned_cols=83  Identities=20%  Similarity=0.286  Sum_probs=64.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----------------CCC-----------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----------------KLI-----------   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----------------~~~-----------   51 (258)
                      |++.+  ...|+..+|+        +|++|.+||.+.+....+..|+..                 .+.           
T Consensus       211 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (383)
T 3eb0_A          211 ELMLG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK  288 (383)
T ss_dssp             HHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHH
T ss_pred             HHhcC--CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHh
Confidence            55664  3457888883        889999999998888777766531                 111           


Q ss_pred             -CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          52 -LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        52 -~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                       +|..++.++++||.+||..||.+|+++     .++++||||..+.+
T Consensus       289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          289 ILPEGTPSLAIDLLEQILRYEPDLRINP-----YEAMAHPFFDHLRN  330 (383)
T ss_dssp             HSCTTCCHHHHHHHHHHCCSSGGGSCCH-----HHHHTSGGGHHHHH
T ss_pred             hCCCCCCHHHHHHHHHHccCChhhCCCH-----HHHhcCHHHHHHHh
Confidence             345689999999999999999999985     99999999987643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.53  E-value=4.6e-08  Score=89.06  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=64.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--C---------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--L---------------------------   50 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~---------------------------   50 (258)
                      |++.+  ...|+.++|+        +|++|++||.+.+....+..|+...  +                           
T Consensus       195 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (367)
T 1cm8_A          195 EVILN--WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKD  272 (367)
T ss_dssp             HHHHT--TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCC
T ss_pred             HHHhC--CCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCC
Confidence            66664  2568888883        8899999999988877776665310  0                           


Q ss_pred             --CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          51 --ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        51 --~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                        .++..+++++++||.+||..||.+|+++     +++++||||..+.+.
T Consensus       273 ~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~-----~e~l~hp~f~~~~~~  317 (367)
T 1cm8_A          273 FASILTNASPLAVNLLEKMLVLDAEQRVTA-----GEALAHPYFESLHDT  317 (367)
T ss_dssp             GGGTCTTCCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTC--
T ss_pred             HHHHCCCCCHHHHHHHHHHccCChhHCCCH-----HHHhcChHHHhhcCC
Confidence              1223578999999999999999999985     999999999977654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.53  E-value=2.1e-07  Score=83.49  Aligned_cols=85  Identities=21%  Similarity=0.325  Sum_probs=64.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC----------------------------C--
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG----------------------------K--   49 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~----------------------------~--   49 (258)
                      |++.+  ...++..+|+        +|++|.+||.+.+....+..|+..                            .  
T Consensus       193 E~~~~--~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (353)
T 3coi_A          193 EVILS--WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD  270 (353)
T ss_dssp             HHHSC--CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCC
T ss_pred             HHHhC--cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCcc
Confidence            55554  2457777783        888999999998877766665431                            0  


Q ss_pred             -CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          50 -LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        50 -~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                       ...+..++.++++||.+||..||.+|+++     .++++||||..+.+..
T Consensus       271 ~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~-----~e~l~hp~f~~~~~~~  316 (353)
T 3coi_A          271 FTQLFPRASPQAADLLEKMLELDVDKRLTA-----AQALTHPFFEPFRDPE  316 (353)
T ss_dssp             TTTTCTTSCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTTCCGG
T ss_pred             HHHhcCCcCHHHHHHHHHHcCCCcccCCCH-----HHHhcCcchhhccCcc
Confidence             01224579999999999999999999985     9999999999776543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.53  E-value=9e-08  Score=83.32  Aligned_cols=79  Identities=23%  Similarity=0.340  Sum_probs=65.0

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .++..+|.        +|++|..||...+...+...|....+.++.    .++.++++||.+||..||.+|+++     .
T Consensus       205 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~  279 (298)
T 1phk_A          205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----E  279 (298)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH-----H
T ss_pred             cCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCH-----H
Confidence            46667773        888999999999888888888887766543    589999999999999999999985     9


Q ss_pred             hhccCCccccCChhhh
Q psy1025          85 AVRVHPFFRSINWSDV  100 (258)
Q Consensus        85 eIk~HpfF~~idW~~l  100 (258)
                      +|++||||...+|+.+
T Consensus       280 ~ll~h~~~~~~~~~~~  295 (298)
T 1phk_A          280 EALAHPFFQQYVVEEV  295 (298)
T ss_dssp             HHTTSGGGCTTC----
T ss_pred             HHHhChHhhhccchhh
Confidence            9999999999998876

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.52  E-value=4.9e-09  Score=94.87  Aligned_cols=80  Identities=19%  Similarity=0.399  Sum_probs=65.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++..+|+        +|++|.+||.+.+...++..|....+.+|..+++++++||++||..||.+|+++ 
T Consensus       177 E~~~~~--~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~-  253 (336)
T 3h4j_B          177 EVINGK--LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITI-  253 (336)
T ss_dssp             GGSCCS--GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCH-
T ss_pred             HHHcCC--CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCH-
Confidence            566642  222566773        889999999987777766667677778899999999999999999999999985 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          ++|++||||..
T Consensus       254 ----~eil~hp~~~~  264 (336)
T 3h4j_B          254 ----QEIRRDPWFNV  264 (336)
T ss_dssp             ----HHHTTCHHHHT
T ss_pred             ----HHHHhChhhcc
Confidence                99999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.52  E-value=6.8e-08  Score=83.18  Aligned_cols=80  Identities=19%  Similarity=0.328  Sum_probs=67.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++...|.        +|++|..||...+...++..|......+|..++.++.+||.+||..||.+|+++ 
T Consensus       180 E~~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-  256 (276)
T 2h6d_A          180 EVISGR--LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATI-  256 (276)
T ss_dssp             GGGTTS--CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-
T ss_pred             HHHcCC--CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCH-
Confidence            556542  223456663        888999999999999999999888888899999999999999999999999985 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          .+|++||||+.
T Consensus       257 ----~~~l~h~~~~~  267 (276)
T 2h6d_A          257 ----KDIREHEWFKQ  267 (276)
T ss_dssp             ----HHHHHSHHHHT
T ss_pred             ----HHHHhChhhcc
Confidence                99999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.51  E-value=4.7e-08  Score=92.09  Aligned_cols=80  Identities=24%  Similarity=0.427  Sum_probs=68.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+    .|+..+|+        +|++|.+||.+.+...++..|....+.++    ..++.++++||.+||..||.+|
T Consensus       193 E~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  268 (486)
T 3mwu_A          193 EVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR  268 (486)
T ss_dssp             GGGGS----CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTS
T ss_pred             HHhCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhC
Confidence            66664    37788883        88899999999999999999998876654    3589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~id   96 (258)
                      +++     .++++||||+...
T Consensus       269 ~t~-----~~~l~hp~~~~~~  284 (486)
T 3mwu_A          269 ITA-----TQCLEHPWIQKYS  284 (486)
T ss_dssp             CCH-----HHHHHCHHHHHTC
T ss_pred             cCH-----HHHhcCHhhccCc
Confidence            985     9999999998654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.51  E-value=4.5e-08  Score=88.41  Aligned_cols=81  Identities=22%  Similarity=0.391  Sum_probs=66.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+. ...++..|....+.++    ..++.++++||.+||..||.+|
T Consensus       203 E~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  278 (351)
T 3c0i_A          203 EVVKR---EPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAER  278 (351)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHcC---CCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHC
Confidence            55654   357778883        889999999874 5677888888777665    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCCh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +++     .++++||||...+|
T Consensus       279 ~s~-----~e~l~hp~~~~~~~  295 (351)
T 3c0i_A          279 ITV-----YEALNHPWLKERDR  295 (351)
T ss_dssp             CCH-----HHHHTSHHHHTHHH
T ss_pred             cCH-----HHHhcChhhcCCcc
Confidence            985     99999999987665

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.51  E-value=2.6e-08  Score=93.92  Aligned_cols=79  Identities=18%  Similarity=0.281  Sum_probs=60.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C-------------------------CCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K-------------------------LIL   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~-------------------------~~~   52 (258)
                      |++.+   .+|+.++|+        +|++|++||.+.+....+..|+..  .                         +.+
T Consensus       233 E~~~~---~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (464)
T 3ttj_A          233 EVILG---MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  309 (464)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCH
T ss_pred             HHHcC---CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCCh
Confidence            67775   468888884        889999999999888777776541  0                         011


Q ss_pred             ----CCC-----------CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          53 ----PPY-----------LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        53 ----P~~-----------~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                          |..           .+.++++||.+||..||.+|+++     +++++||||..
T Consensus       310 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~~~~  361 (464)
T 3ttj_A          310 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-----DDALQHPYINV  361 (464)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH-----HHHHTSTTTGG
T ss_pred             HHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH-----HHHhcChhhhh
Confidence                110           15679999999999999999985     99999999983

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.51  E-value=1.5e-07  Score=85.56  Aligned_cols=85  Identities=21%  Similarity=0.311  Sum_probs=64.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------C------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------L------   50 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------~------   50 (258)
                      |++.+  ...++..+|+        +|++|.+||.+.+....+..|+...                       .      
T Consensus       211 E~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (371)
T 4exu_A          211 EVILS--WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD  288 (371)
T ss_dssp             HHHSC--CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCC
T ss_pred             HHhcC--CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchh
Confidence            55554  2467777883        8889999999988877776664310                       0      


Q ss_pred             --CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          51 --ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        51 --~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                        .++..++.++++||.+||..||.+|+++     .++++||||..+.+..
T Consensus       289 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          289 FTQLFPRASPQAADLLEKMLELDVDKRLTA-----AQALTHPFFEPFRDPE  334 (371)
T ss_dssp             HHHHSTTSCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSGGGTTTCCGG
T ss_pred             HHHhccccChHHHHHHHHHCCCChhhcCCH-----HHHhcCcccccCCCcc
Confidence              0123578999999999999999999985     9999999999876654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.51  E-value=5.5e-08  Score=88.35  Aligned_cols=64  Identities=25%  Similarity=0.495  Sum_probs=53.9

Q ss_pred             hhhcCCCCCCCC----CHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          25 ILEAVKPPFTAD----NRKKTIEKILRGKLILPP--YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        25 ~ml~G~pPF~~~----~~~~l~~~Il~~~~~~P~--~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      +|++|.+||.+.    ........|+...+.+|.  .++.++++||.+||..||.+|+++     .+|++||||.
T Consensus       210 ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~-----~ell~hp~f~  279 (361)
T 3uc3_A          210 VMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISI-----PEIKTHSWFL  279 (361)
T ss_dssp             HHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCH-----HHHHTSHHHH
T ss_pred             HHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCH-----HHHHhCcchh
Confidence            889999999864    345667778877777776  589999999999999999999985     9999999995

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.51  E-value=5.5e-08  Score=92.10  Aligned_cols=74  Identities=23%  Similarity=0.355  Sum_probs=65.5

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .|+..+|.        +|++|.+||.+.+...++..|....+.++    ..++.++++||++||..||.+|+++     +
T Consensus       223 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~-----~  297 (504)
T 3q5i_A          223 KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTA-----E  297 (504)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH-----H
T ss_pred             CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCH-----H
Confidence            36777773        88999999999999999999999887776    5799999999999999999999985     9


Q ss_pred             hhccCCccccC
Q psy1025          85 AVRVHPFFRSI   95 (258)
Q Consensus        85 eIk~HpfF~~i   95 (258)
                      ++++||||+..
T Consensus       298 e~l~h~~~~~~  308 (504)
T 3q5i_A          298 EALNSRWIKKY  308 (504)
T ss_dssp             HHHTSHHHHHT
T ss_pred             HHhcCHhhhhc
Confidence            99999999753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.50  E-value=9.9e-08  Score=85.42  Aligned_cols=84  Identities=19%  Similarity=0.220  Sum_probs=63.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC------------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK------------------------------   49 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~------------------------------   49 (258)
                      |++.+  ...++..+|+        +|++|.+||.+.+....+..|+...                              
T Consensus       201 E~~~~--~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
T 3e3p_A          201 ELIFG--NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN  278 (360)
T ss_dssp             HHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHH
T ss_pred             HHHcC--CCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCccc
Confidence            55544  2347778883        8889999999988888777765410                              


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          50 --LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        50 --~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                        ...+...+.++++||.+||..||.+|+++     .++++||||..+.+.
T Consensus       279 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~f~~~~~~  324 (360)
T 3e3p_A          279 VFSDHSLKDAKEAYDLLSALLQYLPEERMKP-----YEALCHPYFDELHDP  324 (360)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHTCSSGGGSCCH-----HHHTTSGGGGGGGCT
T ss_pred             ccchhhccccHHHHHHHHHHhccCccccCCH-----HHHhcCccccccCCc
Confidence              01112257899999999999999999985     999999999987654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.50  E-value=1.6e-07  Score=81.75  Aligned_cols=74  Identities=27%  Similarity=0.351  Sum_probs=66.0

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      .++..+|.        +|++|..||...+....+..+....+.+|..++.++.+||.+||..||.+|+++     ++|++
T Consensus       191 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~  265 (294)
T 2rku_A          191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI-----NELLN  265 (294)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCG-----GGGGG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCH-----HHHhh
Confidence            45666773        888999999999999989999888888999999999999999999999999985     99999


Q ss_pred             CCccccC
Q psy1025          89 HPFFRSI   95 (258)
Q Consensus        89 HpfF~~i   95 (258)
                      ||||...
T Consensus       266 ~~~~~~~  272 (294)
T 2rku_A          266 DEFFTSG  272 (294)
T ss_dssp             SHHHHTS
T ss_pred             ChheecC
Confidence            9999854

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.49  E-value=1.3e-07  Score=84.47  Aligned_cols=79  Identities=16%  Similarity=0.341  Sum_probs=60.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCC-------HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHh
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADN-------RKKTIEKILRGKLILPP----YLTPDARELIRKLL   68 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~-------~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL   68 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+       ..+++..|....+.++.    .++.++++||.+||
T Consensus       179 E~~~~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  255 (325)
T 3kn6_A          179 ELLNQ---NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLL  255 (325)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHH
T ss_pred             HHhcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHC
Confidence            56653   467888883        8889999997643       35677888888777664    58999999999999


Q ss_pred             hcccccccCCCCCCchhhccCCcccc
Q psy1025          69 KRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        69 ~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      ..||.+|+++     .+|++||||.+
T Consensus       256 ~~dP~~Rpt~-----~ell~h~w~~~  276 (325)
T 3kn6_A          256 TVDPNKRLKM-----SGLRYNEWLQD  276 (325)
T ss_dssp             CCCTTTCCCT-----TTSTTCGGGCT
T ss_pred             CCChhHCCCH-----HHHhcChhhcc
Confidence            9999999986     99999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.48  E-value=6.5e-08  Score=84.18  Aligned_cols=76  Identities=24%  Similarity=0.389  Sum_probs=64.8

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ++...|.        +|++|.+||.+.+...+...|....+.++    ..++.++++||.+||..||.+|+++     .+
T Consensus       199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~e  273 (287)
T 2wei_A          199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA-----TQ  273 (287)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCH-----HH
Confidence            5666673        88899999999999888888888766554    4689999999999999999999985     99


Q ss_pred             hccCCccccCChh
Q psy1025          86 VRVHPFFRSINWS   98 (258)
Q Consensus        86 Ik~HpfF~~idW~   98 (258)
                      |++||||...+|+
T Consensus       274 ll~hp~~~~~~~~  286 (287)
T 2wei_A          274 CLEHPWIQKYSSE  286 (287)
T ss_dssp             HHHSHHHHHHCCC
T ss_pred             HhcCHHHhccccC
Confidence            9999999977664

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.48  E-value=9.3e-08  Score=84.31  Aligned_cols=84  Identities=17%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----C----------------------CCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----K----------------------LIL   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----~----------------------~~~   52 (258)
                      |++.+   ..++..+|.        +|++|.+||.+.+.......|+..     .                      ..+
T Consensus       189 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (326)
T 1blx_A          189 EVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF  265 (326)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGT
T ss_pred             HHHhc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhc
Confidence            45553   346777773        888999999998888777777531     0                      012


Q ss_pred             CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        53 P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +..++.++++||.+||..||.+|+++     .++++||||..++|..
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~~~~~~  307 (326)
T 1blx_A          266 VTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYFQDLERCK  307 (326)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTTCCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCcccCCCH-----HHHhcCccccccchhh
Confidence            34688999999999999999999985     9999999999888753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.48  E-value=1.6e-07  Score=83.86  Aligned_cols=80  Identities=25%  Similarity=0.349  Sum_probs=68.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++..+|.        +|++|..||...+....+..+....+.+|..++.++++||.+||..||.+|+++ 
T Consensus       211 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-  286 (335)
T 2owb_A          211 EVLSK---KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI-  286 (335)
T ss_dssp             HHHHT---SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCG-
T ss_pred             HHhcc---CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCH-
Confidence            44543   346666773        888999999999998988999888889999999999999999999999999985 


Q ss_pred             CCCchhhccCCccccC
Q psy1025          80 PNDGEAVRVHPFFRSI   95 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~i   95 (258)
                          ++|++|+||...
T Consensus       287 ----~ell~~~~~~~~  298 (335)
T 2owb_A          287 ----NELLNDEFFTSG  298 (335)
T ss_dssp             ----GGGGGSHHHHTS
T ss_pred             ----HHHhcCccccCC
Confidence                999999999854

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.48  E-value=1.2e-07  Score=84.64  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=60.6

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc---CC---------------------CCC--------CCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR---GK---------------------LIL--------PPY   55 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~---~~---------------------~~~--------P~~   55 (258)
                      ..++..+|+        +|++|.+||.+.+.......|..   ..                     ..+        +..
T Consensus       198 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (353)
T 2b9h_A          198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPR  277 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTT
T ss_pred             CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhccc
Confidence            457777883        88899999998887665554432   00                     011        135


Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      ++.++++||.+||..||.+|+++     .+|++||||..+.|..
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          278 VNPKGIDLLQRMLVFDPAKRITA-----KEALEHPYLQTYHDPN  316 (353)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTTCCTT
T ss_pred             CCHHHHHHHHHhcCcCcccCCCH-----HHHhcCccccccCCcc
Confidence            88999999999999999999985     9999999999887754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.47  E-value=2.6e-08  Score=89.09  Aligned_cols=78  Identities=13%  Similarity=0.235  Sum_probs=55.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+.++|+        +|++   ||.+... ......+...  .+|+   ..++++++||.+||.+||.+|
T Consensus       200 E~~~~---~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~~L~~dP~~R  271 (299)
T 4g31_A          200 EQIHG---NSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNL--KFPPLFTQKYPCEYVMVQDMLSPSPMER  271 (299)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTT--CCCHHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHcC---CCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcC--CCCCCCcccCHHHHHHHHHHcCCChhHC
Confidence            77775   578899994        7775   8865322 2333444433  4443   357788999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +++     .+|++||||+++||.
T Consensus       272 ps~-----~eil~h~~~~~~~~p  289 (299)
T 4g31_A          272 PEA-----INIIENAVFEDLDFP  289 (299)
T ss_dssp             CCH-----HHHHTSGGGCCC---
T ss_pred             cCH-----HHHhcCHhhCCCCCC
Confidence            985     999999999999995

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.47  E-value=2.1e-07  Score=81.08  Aligned_cols=81  Identities=22%  Similarity=0.414  Sum_probs=58.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCC-CCCCCHHHHHHHHHcC--C---------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPP-FTADNRKKTIEKILRG--K---------------------------   49 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pP-F~~~~~~~l~~~Il~~--~---------------------------   49 (258)
                      |++.+  ...|+.++|+        +|++|..| |.+.+.......|...  .                           
T Consensus       171 E~~~~--~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (292)
T 3o0g_A          171 DVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSL  248 (292)
T ss_dssp             HHHTT--CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCC
T ss_pred             HHHcC--CCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcch
Confidence            55654  2447888884        77766555 6677777777766531  0                           


Q ss_pred             CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          50 LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        50 ~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      ...+..++.++++||.+||..||.+|+++     +++++||||.++
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~hp~f~~~  289 (292)
T 3o0g_A          249 VNVVPKLNATGRDLLQNLLKCNPVQRISA-----EEALQHPYFSDF  289 (292)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTC
T ss_pred             hhcccccChHHHHHHHHHhccChhhCCCH-----HHHhcCcccccC
Confidence            01123478999999999999999999985     999999999853

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.46  E-value=1.3e-07  Score=82.82  Aligned_cols=79  Identities=25%  Similarity=0.396  Sum_probs=66.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|.        +|++|.+||...+...++..|....+.++    ..++.++++||.+||..||.+|
T Consensus       177 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (304)
T 2jam_A          177 EVLAQ---KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNER  253 (304)
T ss_dssp             TTBSS---CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTS
T ss_pred             HHhcc---CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHC
Confidence            55654   357777883        88899999999999999999988765554    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     +++++||||.+
T Consensus       254 ps~-----~~~l~h~~~~~  267 (304)
T 2jam_A          254 YTC-----EKALSHPWIDG  267 (304)
T ss_dssp             CCH-----HHHHTSHHHHS
T ss_pred             cCH-----HHHhcCccccC
Confidence            985     99999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.46  E-value=2.5e-07  Score=84.35  Aligned_cols=84  Identities=19%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C---------------------CCCC---
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K---------------------LILP---   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~---------------------~~~P---   53 (258)
                      |++.+  ...|+.++|+        +|++|++||.+.+....+..|+..  .                     ...|   
T Consensus       199 E~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (367)
T 2fst_X          199 EIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN  276 (367)
T ss_dssp             HHHTT--CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCC
T ss_pred             HHHcC--CcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCC
Confidence            66664  3467888883        889999999998887776666431  0                     0111   


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                           ..+++++++||.+||..||.+|+++     +++++||||..+...
T Consensus       277 ~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~-----~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          277 FANVFIGANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQYHDP  321 (367)
T ss_dssp             HHHHTTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTTCCG
T ss_pred             HHHHCCCCCHHHHHHHHHhCCCCcccCcCH-----HHHhcChhhhhccCC
Confidence                 2468899999999999999999985     999999999876543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.45  E-value=5.4e-08  Score=84.05  Aligned_cols=80  Identities=33%  Similarity=0.547  Sum_probs=55.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..++...|.        +|++|.+||...+.......+....+.+|..++.++++||.+||..||.+|+++ 
T Consensus       182 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-  257 (278)
T 3cok_A          182 EIATR---SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSL-  257 (278)
T ss_dssp             -------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCH-
T ss_pred             chhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCH-
Confidence            45553   345666673        888999999887766666676666777888999999999999999999999985 


Q ss_pred             CCCchhhccCCccccC
Q psy1025          80 PNDGEAVRVHPFFRSI   95 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~i   95 (258)
                          ++|++||||...
T Consensus       258 ----~~~l~h~~~~~~  269 (278)
T 3cok_A          258 ----SSVLDHPFMSRN  269 (278)
T ss_dssp             ----HHHTTSTTTC--
T ss_pred             ----HHHhcCccccCC
Confidence                999999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.45  E-value=8.4e-08  Score=90.63  Aligned_cols=77  Identities=21%  Similarity=0.403  Sum_probs=66.7

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .|+..+|+        +|++|.+||.+.+...++..|....+.++.    .++.++++||++||..||.+|+++     .
T Consensus       213 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-----~  287 (494)
T 3lij_A          213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA-----Q  287 (494)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCH-----H
T ss_pred             cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccH-----H
Confidence            46777773        889999999999999999999988777653    589999999999999999999985     9


Q ss_pred             hhccCCccccCChh
Q psy1025          85 AVRVHPFFRSINWS   98 (258)
Q Consensus        85 eIk~HpfF~~idW~   98 (258)
                      ++++||||+...+.
T Consensus       288 e~l~hp~~~~~~~~  301 (494)
T 3lij_A          288 QALEHPWIKEMCSK  301 (494)
T ss_dssp             HHHTCHHHHHHHHH
T ss_pred             HHhcCcccccCccc
Confidence            99999999876544

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.44  E-value=7.7e-08  Score=84.21  Aligned_cols=79  Identities=20%  Similarity=0.283  Sum_probs=62.2

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC------------------------------CCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI------------------------------LPPYLT   57 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~------------------------------~P~~~S   57 (258)
                      ..++..+|.        +|++|.+||.+.+....+..|+.....                              ++..++
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (320)
T 2i6l_A          200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS  279 (320)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC
T ss_pred             ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhh
Confidence            457777773        889999999998887777766542111                              124589


Q ss_pred             HHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          58 PDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        58 ~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      .++++||.+||..||.+|+++     ++|++||||..++|..
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          280 REAVDFLEQILTFSPMDRLTA-----EEALSHPYMSIYSFPM  316 (320)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCH-----HHHHTSHHHHTTCC--
T ss_pred             HHHHHHHHHHcCCCccccCCH-----HHHhCCcccccccCcc
Confidence            999999999999999999985     9999999999888864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.44  E-value=9.6e-08  Score=82.41  Aligned_cols=72  Identities=29%  Similarity=0.468  Sum_probs=63.9

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ++..+|.        +|++|.+||...+.......|......+|.    .++.++++||.+||..||.+|+++     .+
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~-----~~  258 (277)
T 3f3z_A          184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITS-----LQ  258 (277)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH-----HH
T ss_pred             CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            5666773        888999999999999999999998888775    689999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      +++||||..
T Consensus       259 ~l~h~~~~~  267 (277)
T 3f3z_A          259 ALEHEWFEK  267 (277)
T ss_dssp             HTTSHHHHH
T ss_pred             HhcCHHHhc
Confidence            999999974

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.44  E-value=5.3e-08  Score=89.87  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=63.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH----HHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK----KTIEKILRGKLILP----PYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~----~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+..    .+...|....+.+|    ..++.++++||++||..|
T Consensus       233 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  309 (400)
T 1nxk_A          233 EVLGP---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE  309 (400)
T ss_dssp             GGSCC---CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSS
T ss_pred             hhcCC---CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCC
Confidence            67764   467888884        889999999875432    24567777777666    368999999999999999


Q ss_pred             cccccCCCCCCchhhccCCcccc
Q psy1025          72 VAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |.+|+++     ++|++||||..
T Consensus       310 P~~Rpt~-----~eil~hp~~~~  327 (400)
T 1nxk_A          310 PTQRMTI-----TEFMNHPWIMQ  327 (400)
T ss_dssp             GGGSCCH-----HHHHHSHHHHT
T ss_pred             hhHCcCH-----HHHhcCccccC
Confidence            9999985     99999999974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.44  E-value=4.9e-08  Score=90.56  Aligned_cols=89  Identities=19%  Similarity=0.285  Sum_probs=67.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+.+...|+.++|+        +|++|.+||..... ..+...|....+.++    ..++.++++||.+||..||.+
T Consensus       311 E~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  390 (419)
T 3i6u_A          311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA  390 (419)
T ss_dssp             TTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             eeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhH
Confidence            55554334567778883        88999999976433 345556666666554    368999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhh
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                      |+++     +++++||||.+.+|....
T Consensus       391 Rps~-----~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          391 RFTT-----EEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             SCCH-----HHHHHSGGGCCHHHHHHH
T ss_pred             CcCH-----HHHhCCcccCChhHHHHH
Confidence            9985     999999999999887653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.44  E-value=4.8e-08  Score=89.00  Aligned_cols=82  Identities=18%  Similarity=0.177  Sum_probs=59.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC------------------CC-------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL------------------PP-------   54 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~------------------P~-------   54 (258)
                      |++.+   ..|+.++|+        +|++|.+||.+.+....+..|+......                  |.       
T Consensus       228 E~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (382)
T 2vx3_A          228 EVLLG---MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKK  304 (382)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECC
T ss_pred             HHHcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccc
Confidence            66664   357888883        8899999999988888777765421000                  00       


Q ss_pred             -----------C----------------------------CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          55 -----------Y----------------------------LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        55 -----------~----------------------------~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                                 .                            .+.++++||.+||..||.+|+++     +++++||||...
T Consensus       305 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta-----~e~L~hp~f~~~  379 (382)
T 2vx3_A          305 TKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP-----YYALQHSFFKKT  379 (382)
T ss_dssp             CCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCH-----HHHTTSGGGCC-
T ss_pred             ccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCH-----HHHhcCcccccC
Confidence                       0                            01378999999999999999985     999999999876


Q ss_pred             Ch
Q psy1025          96 NW   97 (258)
Q Consensus        96 dW   97 (258)
                      .|
T Consensus       380 ~~  381 (382)
T 2vx3_A          380 AD  381 (382)
T ss_dssp             --
T ss_pred             CC
Confidence            55

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.43  E-value=1.3e-07  Score=82.98  Aligned_cols=80  Identities=13%  Similarity=0.154  Sum_probs=60.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----CCC----------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----LIL----------------------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----~~~----------------------   52 (258)
                      |++.+   ..|+.++|.        +|++|.+||.+.+.......|....     ..+                      
T Consensus       189 E~~~~---~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (308)
T 3g33_A          189 EVLLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV  265 (308)
T ss_dssp             HHHHT---SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHH
T ss_pred             hHHcC---CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHh
Confidence            55654   357777883        8899999999998888877775410     011                      


Q ss_pred             CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        53 P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      ...++.++++||.+||..||.+|+++     .++++||||...
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~R~t~-----~e~l~h~~~~~~  303 (308)
T 3g33_A          266 VPEMEESGAQLLLEMLTFNPHKRISA-----FRALQHSYLHKD  303 (308)
T ss_dssp             SCSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSTTC---
T ss_pred             CccccHHHHHHHHHHhcCCCccCCCH-----HHHhcCccccCC
Confidence            12578999999999999999999985     999999999853

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.43  E-value=1.7e-07  Score=84.18  Aligned_cols=85  Identities=13%  Similarity=0.094  Sum_probs=65.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C---CCCC---------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K---LILP---------------------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~---~~~P---------------------   53 (258)
                      |++.+  ...|+..+|.        +|++|.+||.+.+....+.+|...  .   ..+|                     
T Consensus       182 E~~~~--~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (346)
T 1ua2_A          182 ELLFG--ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH  259 (346)
T ss_dssp             HHHTT--CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHH
T ss_pred             hHhhC--CCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHH
Confidence            56654  3457888883        888999999999888887777642  0   0111                     


Q ss_pred             --CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhh
Q psy1025          54 --PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        54 --~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                        ..++.++++||.+||..||.+|+++     +++++||||.+..|..
T Consensus       260 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~h~~f~~~~~~~  302 (346)
T 1ua2_A          260 IFSAAGDDLLDLIQGLFLFNPCARITA-----TQALKMKYFSNRPGPT  302 (346)
T ss_dssp             HCTTCCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSGGGTSSSCCC
T ss_pred             hhccCCHHHHHHHHHHhccChhhCCCH-----HHHhcChhhhcCCCCC
Confidence              3467899999999999999999985     9999999999876653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=85.50  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=65.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+   ..++..+|.        +|++|..||...+. ..++..|....+.++    ..++.++++||.+||..||.+
T Consensus       220 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  296 (349)
T 2w4o_A          220 EILRG---CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK  296 (349)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HHhcC---CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhh
Confidence            56664   357777873        88999999976554 447778887766544    358999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCCh
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      |+++     .++++||||.+..+
T Consensus       297 Rpt~-----~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          297 RLTT-----FQALQHPWVTGKAA  314 (349)
T ss_dssp             SCCH-----HHHHHSTTTTSTTC
T ss_pred             CcCH-----HHHhcCcccCCCcc
Confidence            9985     99999999987554

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.42  E-value=8e-08  Score=85.54  Aligned_cols=89  Identities=21%  Similarity=0.261  Sum_probs=66.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-------------------CCCCC-------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-------------------KLILP-------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-------------------~~~~P-------   53 (258)
                      |++.+  ...++..+|.        +|++|.+||.+.+.......|...                   ...+|       
T Consensus       194 E~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (331)
T 4aaa_A          194 ELLVG--DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP  271 (331)
T ss_dssp             HHHTT--CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCC
T ss_pred             ccccC--CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccch
Confidence            45554  2356777773        888999999988877766655421                   11111       


Q ss_pred             -----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcC
Q psy1025          54 -----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSR  103 (258)
Q Consensus        54 -----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r  103 (258)
                           ..++.++.+||.+||..||.+|+++     .+|++||||+..+|.....+
T Consensus       272 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~~~~~  321 (331)
T 4aaa_A          272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFC-----AELLHHDFFQMDGFAERFSQ  321 (331)
T ss_dssp             HHHHSTTSCHHHHHHHHHHTCSSGGGSCCG-----GGGGGSHHHHGGGHHHHHHH
T ss_pred             hhhcccchhHHHHHHHHHHhccCcccCCCH-----HHHhcCchhccCChhhhhhH
Confidence                 2478999999999999999999985     99999999998888765543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.41  E-value=7e-08  Score=83.40  Aligned_cols=84  Identities=19%  Similarity=0.282  Sum_probs=69.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|+        +|++|..||.+.+.......|......++    ..++.++++||.+||..||.+|
T Consensus       181 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  257 (283)
T 3bhy_A          181 EIVNY---EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR  257 (283)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             ceecC---CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHC
Confidence            55553   356667773        88899999999999888888887766665    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +++     .++++||||+.+.|..
T Consensus       258 ps~-----~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          258 MTI-----AQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             CCH-----HHHHHCHHHHHHHHCC
T ss_pred             cCH-----HHHHhCHHHHHHHHHh
Confidence            985     9999999999876654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.40  E-value=1.9e-07  Score=82.09  Aligned_cols=80  Identities=19%  Similarity=0.276  Sum_probs=63.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+.......+...   .+..|..++..+++||.+||..||.+|+
T Consensus       186 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  262 (297)
T 3fxz_A          186 EVVTR---KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG  262 (297)
T ss_dssp             HHHHC---SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             hhhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCc
Confidence            55554   457777783        889999999998887766665532   3445678999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccC
Q psy1025          77 GSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~i   95 (258)
                      ++     .++++||||+..
T Consensus       263 s~-----~ell~h~~~~~~  276 (297)
T 3fxz_A          263 SA-----KELLQHQFLKIA  276 (297)
T ss_dssp             CH-----HHHTTCGGGGGC
T ss_pred             CH-----HHHhhChhhccc
Confidence            85     999999999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.40  E-value=2.2e-07  Score=83.40  Aligned_cols=82  Identities=24%  Similarity=0.285  Sum_probs=62.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C----------------------CC----
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K----------------------LI----   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~----------------------~~----   51 (258)
                      |++.+  ...++..+|.        +|++|.+||.+.+.......|...  .                      ..    
T Consensus       203 E~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (362)
T 3pg1_A          203 ELVMQ--FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR  280 (362)
T ss_dssp             HHHTT--CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC
T ss_pred             HHhcC--CCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh
Confidence            55554  2457777883        888999999998887777666431  0                      01    


Q ss_pred             ----CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          52 ----LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        52 ----~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                          .+..+++.+.+||.+||..||.+|+++     .++++||||+.+.
T Consensus       281 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~  324 (362)
T 3pg1_A          281 AWTAVVPTADPVALDLIAKMLEFNPQRRIST-----EQALRHPYFESLF  324 (362)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGTTTC
T ss_pred             hHHhhCCCCCHHHHHHHHHHhcCChhhCCCH-----HHHHcCchhhhcc
Confidence                123568899999999999999999985     9999999999763

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.39  E-value=7.8e-08  Score=86.38  Aligned_cols=40  Identities=10%  Similarity=0.272  Sum_probs=34.2

Q ss_pred             CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          51 ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        51 ~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      .+|..++.++++||.+||..||.+|+++     .+|++||||.+.
T Consensus       301 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~  340 (373)
T 1q8y_A          301 KFSKDEAKEISDFLSPMLQLDPRKRADA-----GGLVNHPWLKDT  340 (373)
T ss_dssp             CCCHHHHHHHHHHHGGGGCSSTTTCBCH-----HHHHTCGGGTTC
T ss_pred             cCCcchHHHHHHHHHHHhccCccccCCH-----HHHhhChhhhcc
Confidence            3444567889999999999999999985     999999999863

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.39  E-value=2.2e-07  Score=84.36  Aligned_cols=72  Identities=26%  Similarity=0.382  Sum_probs=62.8

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      .|+..+|+        +|++|.+||...+...+...|....+.++    ..++.++.+||.+||..||.+|+++     +
T Consensus       281 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~  355 (365)
T 2y7j_A          281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA-----E  355 (365)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCH-----H
T ss_pred             CCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCH-----H
Confidence            46777773        88899999999888888888888877665    3689999999999999999999985     9


Q ss_pred             hhccCCccc
Q psy1025          85 AVRVHPFFR   93 (258)
Q Consensus        85 eIk~HpfF~   93 (258)
                      +|++||||+
T Consensus       356 ell~hp~f~  364 (365)
T 2y7j_A          356 QALQHPFFE  364 (365)
T ss_dssp             HHHHSGGGC
T ss_pred             HHhcCcccC
Confidence            999999996

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.37  E-value=3.6e-07  Score=79.54  Aligned_cols=73  Identities=22%  Similarity=0.249  Sum_probs=61.2

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP---YLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~---~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|.        +|++|..||.+.+...+...+......++.   .+++++++||.+||..||.+|+++     .+
T Consensus       201 ~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~e  275 (285)
T 3is5_A          201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSA-----AQ  275 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCH-----HH
T ss_pred             CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            35667773        888999999999988888887766555542   479999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |++||||+.
T Consensus       276 ~l~hp~f~~  284 (285)
T 3is5_A          276 VLHHEWFKQ  284 (285)
T ss_dssp             HHTSGGGGC
T ss_pred             HhcCHHhhc
Confidence            999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.33  E-value=2.5e-07  Score=84.85  Aligned_cols=37  Identities=27%  Similarity=0.364  Sum_probs=33.3

Q ss_pred             CHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          57 TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        57 S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      +.++.+||.+||..||.+|+++     +++++||||.+..|.
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta-----~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITS-----EQAMQDPYFLEDPLP  343 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTSSSCC
T ss_pred             CHHHHHHHHHHccCCcccCCCH-----HHHhcChhhccCCCC
Confidence            7889999999999999999985     999999999876554

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.33  E-value=4.7e-07  Score=78.87  Aligned_cols=81  Identities=20%  Similarity=0.317  Sum_probs=66.8

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL---ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~---~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++..+|.        +|++|.+||...+.......+.....   ..|..++.++.+||.+||..||.+|+++     .
T Consensus       197 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~  271 (302)
T 2j7t_A          197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSA-----A  271 (302)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCH-----H
T ss_pred             CCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCH-----H
Confidence            456777773        88899999999888887777766543   2345789999999999999999999985     9


Q ss_pred             hhccCCccccCChhhhh
Q psy1025          85 AVRVHPFFRSINWSDVL  101 (258)
Q Consensus        85 eIk~HpfF~~idW~~l~  101 (258)
                      +|++||||.++.|....
T Consensus       272 ~ll~h~~~~~~~~~~~~  288 (302)
T 2j7t_A          272 QLLEHPFVSSITSNKAL  288 (302)
T ss_dssp             HHTTSTTTTTCCCCHHH
T ss_pred             HHhcChHHhhhccchhH
Confidence            99999999999987643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.32  E-value=2.3e-07  Score=83.32  Aligned_cols=82  Identities=16%  Similarity=0.271  Sum_probs=61.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++..+|+        +|++|..||...      ..+....+..|..++.++++||.+||..||.+|+++ 
T Consensus       199 E~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~-  269 (335)
T 3dls_A          199 EVLMGN--PYRGPELEMWSLGVTLYTLVFEENPFCEL------EETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTL-  269 (335)
T ss_dssp             HHHTTC--CBCSHHHHHHHHHHHHHHHHHSSCSCSSG------GGGTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-
T ss_pred             hhhcCC--CCCCCcccchhHHHHHHHHHhCCCchhhH------HHHHhhccCCCcccCHHHHHHHHHHccCChhhCcCH-
Confidence            555542  223667773        888999999762      223445566677899999999999999999999985 


Q ss_pred             CCCchhhccCCccc------cCChhhhhc
Q psy1025          80 PNDGEAVRVHPFFR------SINWSDVLS  102 (258)
Q Consensus        80 ~~g~~eIk~HpfF~------~idW~~l~~  102 (258)
                          ++|++||||.      .++|+.+..
T Consensus       270 ----~ell~hp~~~~~~~~~~~~~~~~~~  294 (335)
T 3dls_A          270 ----EKLVTDPWVTQPVNLADYTWEEVFR  294 (335)
T ss_dssp             ----HHHHHCTTTTCCCCGGGCCHHHHC-
T ss_pred             ----HHHhcCccccCCccccccCHHHHhh
Confidence                9999999995      467777643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.30  E-value=2.1e-07  Score=82.29  Aligned_cols=87  Identities=20%  Similarity=0.302  Sum_probs=65.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-HHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-KTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+.....++..+|.        +|++|.+||...... .+...|....+.++    ..++.++++||.+||..||.+
T Consensus       186 E~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  265 (322)
T 2ycf_A          186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKA  265 (322)
T ss_dssp             HHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             hhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhh
Confidence            45432223567778883        888999999764432 34555666655543    468999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhh
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      |+++     .++++||||.+.+|..
T Consensus       266 Rps~-----~~~l~h~~~~~~~~~~  285 (322)
T 2ycf_A          266 RFTT-----EEALRHPWLQDEDMKR  285 (322)
T ss_dssp             SCCH-----HHHHTSGGGCCHHHHH
T ss_pred             CCCH-----HHHhhCcCcCCHHHHH
Confidence            9985     9999999999888754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.29  E-value=2.9e-07  Score=82.63  Aligned_cols=78  Identities=10%  Similarity=0.076  Sum_probs=59.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC--------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP--------------------------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P--------------------------   53 (258)
                      |++.+   ..|+.++|+        +|++|.+||.+.+.......|......+|                          
T Consensus       229 E~~~~---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p  305 (360)
T 3llt_A          229 EVILN---LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWP  305 (360)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTT
T ss_pred             HHHcC---CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCc
Confidence            66664   457778883        88999999998888777666654322222                          


Q ss_pred             C--------------------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          54 P--------------------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        54 ~--------------------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      .                    ..+.++++||.+||..||.+|+++     .++++||||+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta-----~elL~hp~f~  360 (360)
T 3llt_A          306 ENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSP-----AELLKHKFLE  360 (360)
T ss_dssp             TTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCH-----HHHTTSGGGC
T ss_pred             ccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCH-----HHHhcCcccC
Confidence            1                    123678899999999999999985     9999999995

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.29  E-value=1.8e-07  Score=87.06  Aligned_cols=79  Identities=13%  Similarity=0.130  Sum_probs=59.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C------------------CC--------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K------------------LI--------   51 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~------------------~~--------   51 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+....+..|...  .                  -.        
T Consensus       269 E~~~~---~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (429)
T 3kvw_A          269 EVILG---ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVT  345 (429)
T ss_dssp             HHHHT---BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEE
T ss_pred             HHHhC---CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccc
Confidence            66664   357888883        889999999998887776665431  0                  00        


Q ss_pred             -------------------------------CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          52 -------------------------------LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        52 -------------------------------~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                                                     ++...++++++||.+||..||.+|+++     +++++||||+.
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta-----~e~L~Hpw~~~  414 (429)
T 3kvw_A          346 TLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP-----GQALRHPWLRR  414 (429)
T ss_dssp             CCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSTTTC-
T ss_pred             ccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH-----HHHhCChhhcc
Confidence                                           111247889999999999999999985     99999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.28  E-value=2.9e-07  Score=81.74  Aligned_cols=65  Identities=23%  Similarity=0.415  Sum_probs=55.7

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                      +|++|..||...      ..+......++..++.++++||.+||..||.+|+++     ++|++||||.++.+...
T Consensus       241 el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~ll~hp~~~~~~~~~~  305 (320)
T 3a99_A          241 DMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTF-----EEIQNHPWMQDVLLPQE  305 (320)
T ss_dssp             HHHHSSCSCCSH------HHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-----HHHHTSGGGSSCCCHHH
T ss_pred             HHHHCCCCCCCh------hhhhcccccccccCCHHHHHHHHHHccCChhhCcCH-----HHHhcCHhhcCccCccc
Confidence            888999999763      245666777888999999999999999999999985     99999999998876643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.28  E-value=1.8e-07  Score=82.28  Aligned_cols=81  Identities=19%  Similarity=0.197  Sum_probs=58.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC--------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP--------------------------   53 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P--------------------------   53 (258)
                      |++.+   ..++..+|.        +|++|.+||...+.......+......+|                          
T Consensus       204 E~~~~---~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
T 1z57_A          204 EVILA---LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSA  280 (339)
T ss_dssp             HHHTT---SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHH
T ss_pred             HHhhC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccc
Confidence            56664   457778883        88899999998877665544432111111                          


Q ss_pred             ------------------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          54 ------------------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        54 ------------------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                                        ...+.++.+||.+||..||.+|+++     .+|++||||..+.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~  336 (339)
T 1z57_A          281 GRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL-----REALKHPFFDLLK  336 (339)
T ss_dssp             HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH-----HHHTTSGGGGGGG
T ss_pred             cchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH-----HHHhcCHHHHHHh
Confidence                              1124678899999999999999985     9999999998653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.27  E-value=3.3e-07  Score=79.63  Aligned_cols=80  Identities=15%  Similarity=0.148  Sum_probs=54.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL----------ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~----------~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      .++..+|.        +|++|..||...+.......+.....          ..+..++.++++||.+||..||.+|+++
T Consensus       203 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  282 (303)
T 2vwi_A          203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA  282 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCH
Confidence            46667773        88899999988766555554443321          1224578999999999999999999985


Q ss_pred             CCCCchhhccCCccccCChhhhh
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                           .+|++||||....+..+.
T Consensus       283 -----~~ll~h~~~~~~~~~~~~  300 (303)
T 2vwi_A          283 -----AELLRHKFFQKAKNKEFL  300 (303)
T ss_dssp             -----HHHHTSTTC---------
T ss_pred             -----HHHhhChhhhcCCCCccc
Confidence                 999999999988776654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.27  E-value=2.9e-07  Score=82.69  Aligned_cols=85  Identities=16%  Similarity=0.240  Sum_probs=62.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHH-------------------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTI-------------------------------------   42 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~-------------------------------------   42 (258)
                      |++.+   ..|+..+|+        +|++|..||...+...+.                                     
T Consensus       200 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (360)
T 3eqc_A          200 ERLQG---THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA  276 (360)
T ss_dssp             HHHTT---CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCC
T ss_pred             HHHcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCccc
Confidence            55654   457777883        888999999876654432                                     


Q ss_pred             -----HHHHcCC-CCCC-CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          43 -----EKILRGK-LILP-PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        43 -----~~Il~~~-~~~P-~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                           ..+.... ...| ..++.++++||.+||..||.+|+++     +++++||||++.+|+.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~~~~~~~  336 (360)
T 3eqc_A          277 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRSDAEEV  336 (360)
T ss_dssp             HHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSHHHHHHHHSCC
T ss_pred             chhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCH-----HHHhhChHhhcchHhhh
Confidence                 2223222 2222 2479999999999999999999985     99999999998777654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.25  E-value=7.5e-07  Score=79.24  Aligned_cols=81  Identities=14%  Similarity=0.296  Sum_probs=63.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL---ILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~---~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+.......+.....   ..+..++.++++||.+||..||.+|+
T Consensus       211 E~~~~---~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  287 (321)
T 2c30_A          211 EVISR---SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA  287 (321)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             hhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCc
Confidence            44543   346667773        88999999999888888888776532   22346899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCC
Q psy1025          77 GSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~id   96 (258)
                      ++     .+|++||||....
T Consensus       288 s~-----~ell~hp~~~~~~  302 (321)
T 2c30_A          288 TA-----QELLDHPFLLQTG  302 (321)
T ss_dssp             CH-----HHHHTSGGGGGCC
T ss_pred             CH-----HHHhcChhhccCC
Confidence            85     9999999998544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.24  E-value=4.4e-07  Score=81.11  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |++||.+.+..+++..|..+. +..|..++.++.+||.+||.+||.+|++
T Consensus       200 E~~~~---~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs  276 (299)
T 4asz_A          200 ESIMY---RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKN  276 (299)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHcC---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcC
Confidence            67775   46888888        38887 999999999999999998765 5678899999999999999999999997


Q ss_pred             CCCCCchhhccCCccc
Q psy1025          78 SGPNDGEAVRVHPFFR   93 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~   93 (258)
                      +     .+|  |.|++
T Consensus       277 ~-----~~i--~~~L~  285 (299)
T 4asz_A          277 I-----KGI--HTLLQ  285 (299)
T ss_dssp             H-----HHH--HHHHH
T ss_pred             H-----HHH--HHHHH
Confidence            5     787  45665

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.23  E-value=4.1e-07  Score=80.78  Aligned_cols=98  Identities=16%  Similarity=0.135  Sum_probs=58.0

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCC--------
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGS--------   78 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~--------   78 (258)
                      .|+..+|+        +|++ |.+||.+.+...+...+... .+..|..++.++.+||.+||..||.+|+++        
T Consensus       193 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~  272 (325)
T 3kex_A          193 KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFT  272 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred             CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            46777773        7788 99999988888887777765 456677889999999999999999999864        


Q ss_pred             ------------CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCC
Q psy1025          79 ------------GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT  114 (258)
Q Consensus        79 ------------~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~  114 (258)
                                  ...+...+..+|.+.+++|+.+..+.++|||.|...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~d  320 (325)
T 3kex_A          273 RMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELEPELDLDLD  320 (325)
T ss_dssp             HHTTSHHHHBCCCSSSSCCCBCCCCCCC--------------------
T ss_pred             HHHhcchhhhccccCCCCCCCCCCccccchhhcccccccchhccCCcc
Confidence                        001112234567777888888777777777776543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.23  E-value=1.2e-06  Score=75.32  Aligned_cols=79  Identities=24%  Similarity=0.330  Sum_probs=65.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..++...|.        +|++|.+||...+...+...|..... .+|..++.++++||.+||..||.+|+++
T Consensus       186 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~  262 (279)
T 2w5a_A          186 EQMNR---MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV  262 (279)
T ss_dssp             HHHHC---C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHhcc---CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCH
Confidence            55553   356777773        88899999999888888888887765 5677899999999999999999999974


Q ss_pred             CCCCchhhccCCcccc
Q psy1025          79 GPNDGEAVRVHPFFRS   94 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~   94 (258)
                           ++|.+|+|+..
T Consensus       263 -----~~ll~~~~~~~  273 (279)
T 2w5a_A          263 -----EEILENPLILE  273 (279)
T ss_dssp             -----HHHHTSTTCCG
T ss_pred             -----HHHHhChhhhh
Confidence                 99999999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.21  E-value=6.9e-08  Score=87.54  Aligned_cols=86  Identities=15%  Similarity=0.078  Sum_probs=62.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHH--HHHH-----HHcCCCCCC--CCCCHHHHHHHHHHhhc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKK--TIEK-----ILRGKLILP--PYLTPDARELIRKLLKR   70 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~--l~~~-----Il~~~~~~P--~~~S~ea~dLI~~LL~k   70 (258)
                      |++.+. ...|+..+|+        +|++|.+||.+.+...  .+..     +....+.+|  ..++.++++||.+||..
T Consensus       261 E~~~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  339 (371)
T 3q60_A          261 EFLNAS-TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNF  339 (371)
T ss_dssp             HHHTCS-EEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCS
T ss_pred             hhccCC-CCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCC
Confidence            555531 2467888883        8899999998764321  1111     111223333  47899999999999999


Q ss_pred             ccccccCCCCCCchhhccCCccccCChhh
Q psy1025          71 QVAQRLGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        71 dP~~RLg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      ||.+|+++     .++++||||..++|..
T Consensus       340 dP~~Rpt~-----~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          340 DRRRRLLP-----LEAMETPEFLQLQNEI  363 (371)
T ss_dssp             STTTCCCH-----HHHTTSHHHHHHHHHH
T ss_pred             ChhhCCCH-----HHHhcCHHHHHHHHHH
Confidence            99999985     9999999999998874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.21  E-value=1.1e-06  Score=76.37  Aligned_cols=72  Identities=14%  Similarity=0.318  Sum_probs=56.3

Q ss_pred             CCceehH--------hhhcCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          18 HTKAERN--------ILEAVKPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~-~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      ++..+|.        +|++|..||.. .+...++..+....  ..++...++++++||.+||..||.+|+++     .+|
T Consensus       206 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~el  280 (290)
T 1t4h_A          206 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI-----KDL  280 (290)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCH-----HHH
T ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCH-----HHH
Confidence            6667773        88899999987 45555555555442  33456788999999999999999999985     999


Q ss_pred             ccCCcccc
Q psy1025          87 RVHPFFRS   94 (258)
Q Consensus        87 k~HpfF~~   94 (258)
                      ++||||++
T Consensus       281 l~h~~f~~  288 (290)
T 1t4h_A          281 LNHAFFQE  288 (290)
T ss_dssp             HTSGGGC-
T ss_pred             hhCccccc
Confidence            99999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.20  E-value=9.2e-07  Score=77.54  Aligned_cols=86  Identities=17%  Similarity=0.283  Sum_probs=66.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|.        +|++|..||...+.......+....   +..|..++.++.+||.+||..||.+|+
T Consensus       195 E~~~~---~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  271 (314)
T 3com_A          195 EVIQE---IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRA  271 (314)
T ss_dssp             HHHSS---SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred             hhcCC---CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCc
Confidence            45553   346666773        8889999999877766655554432   233556899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhh
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVL  101 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~  101 (258)
                      ++     .+|++||||.+..+..+.
T Consensus       272 t~-----~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          272 TA-----TQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             CH-----HHHTTSHHHHTCCCGGGG
T ss_pred             CH-----HHHHhCHHHhcCCcchHH
Confidence            85     999999999988776554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.19  E-value=1.1e-06  Score=75.93  Aligned_cols=74  Identities=15%  Similarity=0.258  Sum_probs=55.5

Q ss_pred             CCCCceehH--------hhhcCCCCCCC-CCHHHHHHHH-HcCCCCCC-CCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTA-DNRKKTIEKI-LRGKLILP-PYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~-~~~~~l~~~I-l~~~~~~P-~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++..+|.        +|++|..||.. .........+ .......+ ..++.++++||.+||..||.+|+++     .
T Consensus       188 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~  262 (290)
T 3fme_A          188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY-----P  262 (290)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCH-----H
T ss_pred             cCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCH-----H
Confidence            457777883        88899999975 3444444444 34444444 4689999999999999999999985     9


Q ss_pred             hhccCCcccc
Q psy1025          85 AVRVHPFFRS   94 (258)
Q Consensus        85 eIk~HpfF~~   94 (258)
                      +|++||||..
T Consensus       263 e~l~hp~f~~  272 (290)
T 3fme_A          263 ELMQHPFFTL  272 (290)
T ss_dssp             HHTTSHHHHH
T ss_pred             HHHhCccccc
Confidence            9999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.19  E-value=8.3e-07  Score=79.13  Aligned_cols=81  Identities=11%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-KTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-~l~~~Il~~~~~~P--~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+  ...++..+|+        +|++|.+||...+.. ..+..+.......+  ..++.++++||.+||..||.+|+
T Consensus       177 E~~~~--~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  254 (323)
T 3tki_A          177 ELLKR--REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI  254 (323)
T ss_dssp             HHHHC--SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHhcc--CCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCc
Confidence            55554  2234666773        888999999875543 33344443333333  46899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccC
Q psy1025          77 GSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~i   95 (258)
                      ++     ++|++||||...
T Consensus       255 t~-----~eil~h~~~~~~  268 (323)
T 3tki_A          255 TI-----PDIKKDRWYNKP  268 (323)
T ss_dssp             CH-----HHHTTCTTTTCC
T ss_pred             CH-----HHHhhChhhccc
Confidence            85     999999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.18  E-value=1.4e-06  Score=76.79  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=62.8

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI--LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|.        +|++|.+||...+.......+......  .+..++.++++||.+||..||.+|+++     .+|
T Consensus       210 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l  284 (326)
T 2x7f_A          210 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPAT-----EQL  284 (326)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCH-----HHH
T ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCH-----HHH
Confidence            46666773        888999999988877776666654322  245689999999999999999999985     999


Q ss_pred             ccCCccccCChhhh
Q psy1025          87 RVHPFFRSINWSDV  100 (258)
Q Consensus        87 k~HpfF~~idW~~l  100 (258)
                      ++||||....+...
T Consensus       285 l~hp~~~~~~~~~~  298 (326)
T 2x7f_A          285 MKHPFIRDQPNERQ  298 (326)
T ss_dssp             HTSHHHHCCTTHHH
T ss_pred             hhChHHhhCccccc
Confidence            99999998877643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.17  E-value=1.5e-06  Score=78.48  Aligned_cols=83  Identities=16%  Similarity=0.130  Sum_probs=63.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI--LPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~--~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+.....|+..+|+        +|++|.+||.+.+.......+......  .+..++.++++||.+||..||.+|++
T Consensus       220 E~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  299 (348)
T 1u5q_A          220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT  299 (348)
T ss_dssp             HHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence            55543223457777773        889999999988887777776654322  24568999999999999999999998


Q ss_pred             CCCCCchhhccCCccccC
Q psy1025          78 SGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~i   95 (258)
                      +     ++|++||||...
T Consensus       300 ~-----~~ll~h~~~~~~  312 (348)
T 1u5q_A          300 S-----EVLLKHRFVLRE  312 (348)
T ss_dssp             H-----HHHTTCHHHHSC
T ss_pred             H-----HHHhhChhhhcc
Confidence            5     999999999643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.17  E-value=3.9e-07  Score=82.20  Aligned_cols=34  Identities=15%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      .+.++++||.+||..||.+|+++     .+|++||||.+
T Consensus       364 ~~~~~~~li~~~L~~dP~~Rpt~-----~e~l~hp~~~~  397 (397)
T 1wak_A          364 EAAGFTDFLLPMLELIPEKRATA-----AECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHGGGGCSSGGGSCCH-----HHHHTSGGGGC
T ss_pred             hHHHHHHHHHHHhccChhhcCCH-----HHHhhCccccC
Confidence            45678999999999999999985     99999999973

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.14  E-value=1.7e-06  Score=78.35  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=62.9

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |++||.+.+..+++..|..+ .+..|..+++++.+||.+||.+||.+|++
T Consensus       230 E~~~~---~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs  306 (329)
T 4aoj_A          230 ESILY---RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHS  306 (329)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred             hhhcC---CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcC
Confidence            67775   46888888        38887 99999999999999988875 47788899999999999999999999998


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|.++
T Consensus       307 ~-----~ei~~~  313 (329)
T 4aoj_A          307 I-----KDVHAR  313 (329)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     888643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.13  E-value=1.2e-06  Score=77.25  Aligned_cols=96  Identities=13%  Similarity=0.075  Sum_probs=60.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |.+||.+.+...++..+.... +..|..++.++.+||.+||..||.+|++
T Consensus       209 E~~~~---~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  285 (323)
T 3qup_A          209 ESLAD---NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPS  285 (323)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             hhhcC---CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcC
Confidence            44553   357777883        7788 999999988888888877654 5667889999999999999999999997


Q ss_pred             CCC--CCchhhccCCccccCChhhhhcCCCC
Q psy1025          78 SGP--NDGEAVRVHPFFRSINWSDVLSRKLE  106 (258)
Q Consensus        78 ~~~--~g~~eIk~HpfF~~idW~~l~~r~~~  106 (258)
                      +..  ...++++.|+|+....++.|......
T Consensus       286 ~~~l~~~l~~~l~~~~~~~~~~~pl~~~~~~  316 (323)
T 3qup_A          286 FTCLRMELENILGHLSVLSTSQDPLYINIER  316 (323)
T ss_dssp             HHHHHHHHHHHHHC-----------------
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCc
Confidence            300  01367889999998888777554443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.13  E-value=1.7e-06  Score=74.13  Aligned_cols=81  Identities=11%  Similarity=0.199  Sum_probs=57.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-KTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-~l~~~Il~~~~~~P--~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+.  ..++..+|+        +|++|..||...+.. ..+..+.......+  ..++.++++||.+||..||.+|+
T Consensus       177 E~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (276)
T 2yex_A          177 ELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI  254 (276)
T ss_dssp             GGGTCS--SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCC
Confidence            555531  223556673        888999999875443 33444444333333  36899999999999999999999


Q ss_pred             CCCCCCchhhccCCccccC
Q psy1025          77 GSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~i   95 (258)
                      ++     ++|++||||...
T Consensus       255 s~-----~~il~~~~~~~~  268 (276)
T 2yex_A          255 TI-----PDIKKDRWYNKP  268 (276)
T ss_dssp             CH-----HHHTTCTTTTCC
T ss_pred             CH-----HHHhcCccccCh
Confidence            85     999999999853

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.11  E-value=1.7e-06  Score=79.36  Aligned_cols=73  Identities=19%  Similarity=0.326  Sum_probs=58.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCC-CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTAD-NRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~-~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .|+..+|+        +|++|.+||... +....+..++...  +.+|...+.++++||.+||..||.+|+++     .+
T Consensus       243 ~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----~e  317 (390)
T 2zmd_A          243 KISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PE  317 (390)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----HH
T ss_pred             CCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCH-----HH
Confidence            57778883        889999999864 3445566666543  45677889999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |++||||..
T Consensus       318 ll~hp~~~~  326 (390)
T 2zmd_A          318 LLAHPYVQI  326 (390)
T ss_dssp             HHTSHHHHS
T ss_pred             HhhCcCccc
Confidence            999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.08  E-value=3.2e-06  Score=72.40  Aligned_cols=78  Identities=15%  Similarity=0.264  Sum_probs=56.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+  ...++..+|+        +|++|.+||....   .+..+.... ..+|..++.++++||.+||..||.+|+++
T Consensus       200 E~~~~--~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  274 (289)
T 1x8b_A          200 EVLQE--NYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSA  274 (289)
T ss_dssp             HHHTT--CCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hHhcC--CCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCH
Confidence            55553  2345567773        7788988776542   344555544 45677899999999999999999999985


Q ss_pred             CCCCchhhccCCccccC
Q psy1025          79 GPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~i   95 (258)
                           .+|++||||.+.
T Consensus       275 -----~~ll~h~~~~~~  286 (289)
T 1x8b_A          275 -----MALVKHSVLLSA  286 (289)
T ss_dssp             -----HHHHTCTTC---
T ss_pred             -----HHHhhChHhhhh
Confidence                 999999999853

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.08  E-value=5.5e-07  Score=80.64  Aligned_cols=65  Identities=31%  Similarity=0.472  Sum_probs=42.8

Q ss_pred             hhhcCCCCCCCCCHHHH----HHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          25 ILEAVKPPFTADNRKKT----IEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l----~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                      +|++|.+||...+....    ...+....+.+|    ..++.++++||.+||..||.+|+++     .+|++||||..
T Consensus       221 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~ell~hp~~~~  293 (336)
T 3fhr_A          221 ILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI-----TQFMNHPWINQ  293 (336)
T ss_dssp             HHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHHSHHHHT
T ss_pred             HHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCH-----HHHhcCccccc
Confidence            88899999987655443    233333444444    3689999999999999999999985     99999999974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.04  E-value=2.7e-07  Score=83.85  Aligned_cols=71  Identities=17%  Similarity=0.110  Sum_probs=52.8

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      .|+..+|+        +|++|.+||.+.+.......+.    ..+..++.++++||.+||..||.+|+++     .++++
T Consensus       289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rpt~-----~e~l~  359 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF----RSCKNIPQPVRALLEGFLRYPKEDRLLP-----LQAME  359 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG----SSCCCCCHHHHHHHHHHTCSSGGGCCCH-----HHHHT
T ss_pred             cCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh----hhccCCCHHHHHHHHHHcCCCchhCCCH-----HHHhh
Confidence            57888883        8889999998765544333332    2345789999999999999999999985     99999


Q ss_pred             CCccccCC
Q psy1025          89 HPFFRSIN   96 (258)
Q Consensus        89 HpfF~~id   96 (258)
                      ||||..+.
T Consensus       360 hp~f~~~~  367 (377)
T 3byv_A          360 TPEYEQLR  367 (377)
T ss_dssp             SHHHHHHH
T ss_pred             ChHHHHHH
Confidence            99998653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.02  E-value=4e-06  Score=73.16  Aligned_cols=73  Identities=16%  Similarity=0.173  Sum_probs=60.2

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      .++..+|.        +|++|.+||...+.......+.... ..++..++.++++||.+||..||.+|+++     .+|+
T Consensus       195 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll  269 (303)
T 3a7i_A          195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTA-----KELL  269 (303)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCH-----HHHT
T ss_pred             CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCH-----HHHh
Confidence            45566663        8889999999888877777766543 45667899999999999999999999985     9999


Q ss_pred             cCCcccc
Q psy1025          88 VHPFFRS   94 (258)
Q Consensus        88 ~HpfF~~   94 (258)
                      +||||..
T Consensus       270 ~~~~~~~  276 (303)
T 3a7i_A          270 KHKFILR  276 (303)
T ss_dssp             TCHHHHH
T ss_pred             hChhhhc
Confidence            9999964

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.01  E-value=3.6e-06  Score=73.61  Aligned_cols=75  Identities=15%  Similarity=0.240  Sum_probs=58.0

Q ss_pred             CCCCceehH--------hhhcCCCCCCC-CCHHHHHHHHHcCCC-CCC--CCCCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTA-DNRKKTIEKILRGKL-ILP--PYLTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~-~~~~~l~~~Il~~~~-~~P--~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      ..++..+|.        +|++|..||.. .+....+..++.... .+|  ..++.++++||.+||..||.+|+++     
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----  278 (318)
T 2dyl_A          204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKY-----  278 (318)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCH-----
T ss_pred             cCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCH-----
Confidence            346667773        88899999986 455666677665543 334  3589999999999999999999985     


Q ss_pred             hhhccCCccccC
Q psy1025          84 EAVRVHPFFRSI   95 (258)
Q Consensus        84 ~eIk~HpfF~~i   95 (258)
                      ++|++||||...
T Consensus       279 ~~ll~h~~~~~~  290 (318)
T 2dyl_A          279 NKLLEHSFIKRY  290 (318)
T ss_dssp             HHHTTSHHHHHH
T ss_pred             HHHhhCHHHHhc
Confidence            999999999854

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.99  E-value=7.2e-06  Score=76.18  Aligned_cols=73  Identities=23%  Similarity=0.350  Sum_probs=55.2

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCCCCCC-------CCCHHHHHHHHHHhhcccccccCCC
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKLILPP-------YLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~~~P~-------~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ..++.++|+        +|++ |.+||.......  ..|+...+.++.       .++.++++||.+||..||.+|+++ 
T Consensus       214 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-  290 (434)
T 2rio_A          214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA-  290 (434)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCH-
T ss_pred             cCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCH-
Confidence            457888884        7887 999997654433  455555444432       245889999999999999999985 


Q ss_pred             CCCchhhccCCccccC
Q psy1025          80 PNDGEAVRVHPFFRSI   95 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~i   95 (258)
                          .+|++||||.+.
T Consensus       291 ----~eil~hp~f~~~  302 (434)
T 2rio_A          291 ----MKVLRHPLFWPK  302 (434)
T ss_dssp             ----HHHHTSGGGSCH
T ss_pred             ----HHHHhCCccCCc
Confidence                999999999753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.97  E-value=3.1e-06  Score=74.19  Aligned_cols=61  Identities=26%  Similarity=0.466  Sum_probs=51.9

Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          25 ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                      +|++|+.||...      ..+....+.+|..++.++++||.+||..||.+|+++     ++|++||||....
T Consensus       231 ~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~~~~~~~~~  291 (312)
T 2iwi_A          231 DMVCGDIPFERD------QEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSL-----EEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHSSCSCCSH------HHHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCH-----HHHHHSTTTCC--
T ss_pred             HHHHCCCCCCCh------HHHhhhccCCcccCCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhcCch
Confidence            888999999763      345667788889999999999999999999999985     9999999998643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.96  E-value=4.3e-06  Score=75.03  Aligned_cols=76  Identities=13%  Similarity=0.117  Sum_probs=55.4

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCHHHHHHHHHHhhcccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRGKL------ILPPYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~~~------~~P~~~S~ea~dLI~~LL~kdP~   73 (258)
                      |+++++....|+..+|        |+|++|++||.+.+.......++....      .+|..++.++++||.+||.+||.
T Consensus       204 E~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~  283 (307)
T 3omv_A          204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKE  283 (307)
T ss_dssp             HHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSST
T ss_pred             HHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHh
Confidence            6776543345888888        399999999987655544444443322      23457899999999999999999


Q ss_pred             cccCCCCCCchhhcc
Q psy1025          74 QRLGSGPNDGEAVRV   88 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~   88 (258)
                      +|+++     .+|.+
T Consensus       284 ~RPs~-----~ei~~  293 (307)
T 3omv_A          284 ERPLF-----PQILS  293 (307)
T ss_dssp             TSCCH-----HHHHH
T ss_pred             HCcCH-----HHHHH
Confidence            99975     66654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.96  E-value=5.8e-06  Score=74.07  Aligned_cols=74  Identities=9%  Similarity=0.030  Sum_probs=61.7

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |||++ |.+||.+.+..++...|..+. +..|..++.++.+|+.+|+..||.+|++
T Consensus       217 E~l~~---~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs  293 (308)
T 4gt4_A          217 EAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPR  293 (308)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhC---CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcC
Confidence            56664   45788888        38887 999999999999999988764 5678889999999999999999999998


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|.++
T Consensus       294 ~-----~ei~~~  300 (308)
T 4gt4_A          294 F-----KDIHSR  300 (308)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     777654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.96  E-value=1.3e-06  Score=76.48  Aligned_cols=73  Identities=26%  Similarity=0.357  Sum_probs=51.6

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHH----HHcCCCCCC----CCCCHHHHHHHHHHhhcccccccCCCC
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEK----ILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGP   80 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~----Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~   80 (258)
                      .|+..+|+        +|++|.+||.+.+.......    +....+.+|    ..++.++++||.+||..||.+|+++  
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~--  251 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI--  251 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH--
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCH--
Confidence            45566663        88899999987655443222    222334444    4689999999999999999999985  


Q ss_pred             CCchhhccCCcccc
Q psy1025          81 NDGEAVRVHPFFRS   94 (258)
Q Consensus        81 ~g~~eIk~HpfF~~   94 (258)
                         .++++||||..
T Consensus       252 ---~e~l~hp~~~~  262 (299)
T 3m2w_A          252 ---TEFMNHPWIMQ  262 (299)
T ss_dssp             ---HHHHTSHHHHT
T ss_pred             ---HHHhcChhhcc
Confidence               99999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.95  E-value=3.7e-06  Score=72.65  Aligned_cols=85  Identities=14%  Similarity=0.245  Sum_probs=61.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC-CCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA-DNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~-~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+  ...++..+|.        +|++   ||.. .+...+...+......+|.    ..+..+++||.+||..||.+
T Consensus       200 E~~~~--~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  274 (303)
T 1zy4_A          200 EVLDG--TGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNK  274 (303)
T ss_dssp             HHHTS--CSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGG
T ss_pred             ccccC--CCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCccc
Confidence            45543  2246777773        6666   6643 3445566667666555554    45677999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLS  102 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~  102 (258)
                      |+++     .+|++||||....++.+..
T Consensus       275 Rps~-----~~ll~h~~~~~~~~~~~~~  297 (303)
T 1zy4_A          275 RPGA-----RTLLNSGWLPVKHQDEVIK  297 (303)
T ss_dssp             SCCH-----HHHHHSSCSCCCCHHHHHH
T ss_pred             CcCH-----HHHhCCCCcCCCChHHHHH
Confidence            9985     9999999999988887653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.94  E-value=3.9e-06  Score=76.73  Aligned_cols=74  Identities=14%  Similarity=0.175  Sum_probs=58.6

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHH-HHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKK-TIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~-l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+... +...|..+ .+..|..+++++.+||.+||.+||.+|+
T Consensus       257 E~l~~---~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RP  333 (353)
T 4ase_A          257 ETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP  333 (353)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhc---CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCc
Confidence            67775   46888888        38887 999998866444 44445443 4678889999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     .+|.+|
T Consensus       334 t~-----~eil~~  341 (353)
T 4ase_A          334 TF-----SELVEH  341 (353)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            85     888876

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.93  E-value=6.8e-06  Score=73.48  Aligned_cols=73  Identities=19%  Similarity=0.343  Sum_probs=56.9

Q ss_pred             CCCCceehH--------hhhcCCCCCCCC-CHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTAD-NRKKTIEKILR--GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~-~~~~l~~~Il~--~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..|+..+|.        +|++|.+||... +....+..++.  ....+|...+.++++||.+||..||.+|+++     .
T Consensus       195 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~-----~  269 (343)
T 3dbq_A          195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----P  269 (343)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----H
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCH-----H
Confidence            356777773        889999999763 33344555554  3456778889999999999999999999985     9


Q ss_pred             hhccCCccc
Q psy1025          85 AVRVHPFFR   93 (258)
Q Consensus        85 eIk~HpfF~   93 (258)
                      +|++||||.
T Consensus       270 e~l~hp~~~  278 (343)
T 3dbq_A          270 ELLAHPYVQ  278 (343)
T ss_dssp             HHHTSHHHH
T ss_pred             HHHhCcccc
Confidence            999999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.92  E-value=3.8e-06  Score=72.65  Aligned_cols=75  Identities=17%  Similarity=0.278  Sum_probs=56.2

Q ss_pred             CCCceehH--------hhhcCCCCCCCCC-HHHH-HHH-HHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADN-RKKT-IEK-ILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~-~~~l-~~~-Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++|..||...+ .... ... +......+|..++.++++||.+||..||.+|+++     ++
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~  275 (295)
T 2clq_A          201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACA-----ND  275 (295)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCH-----HH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCH-----HH
Confidence            36667773        8889999997532 2222 222 2344567788899999999999999999999985     99


Q ss_pred             hccCCccccCC
Q psy1025          86 VRVHPFFRSIN   96 (258)
Q Consensus        86 Ik~HpfF~~id   96 (258)
                      |+.||||....
T Consensus       276 ll~~~~~~~~~  286 (295)
T 2clq_A          276 LLVDEFLKVSS  286 (295)
T ss_dssp             HHTSGGGCC--
T ss_pred             HhcChhhhhcc
Confidence            99999998543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.91  E-value=5.8e-06  Score=72.64  Aligned_cols=85  Identities=16%  Similarity=0.176  Sum_probs=65.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+...+...+.... ...|..++.++++||.+||..||.+|+++     .+|
T Consensus       216 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e~  290 (322)
T 1p4o_A          216 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEI  290 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHH
Confidence            46777773        7777 899999998888888887655 35667899999999999999999999985     777


Q ss_pred             ccC------CccccCChhhhhcCCCC
Q psy1025          87 RVH------PFFRSINWSDVLSRKLE  106 (258)
Q Consensus        87 k~H------pfF~~idW~~l~~r~~~  106 (258)
                      .+|      ++|..++|.......++
T Consensus       291 l~~L~~~~~~~~~~~~~~~~~~~~~~  316 (322)
T 1p4o_A          291 ISSIKEEMEPGFREVSFYYSEENKLP  316 (322)
T ss_dssp             HHHHGGGSCTTHHHHCSTTSTTC---
T ss_pred             HHHHHHhhccCCcccccccccccCCC
Confidence            654      78877777655444433

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.90  E-value=8.8e-06  Score=71.40  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=57.4

Q ss_pred             CCCceehH--------hhhcCCCCCCCC-CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTAD-NRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~-~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|.        +|++|..||... +....+..++..  ...+|...+.++++||.+||..||.+|+++     .+
T Consensus       215 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e  289 (313)
T 3cek_A          215 KISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI-----PE  289 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCH-----HH
T ss_pred             cCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCH-----HH
Confidence            56777773        888999999764 333444555543  345677789999999999999999999985     99


Q ss_pred             hccCCcccc
Q psy1025          86 VRVHPFFRS   94 (258)
Q Consensus        86 Ik~HpfF~~   94 (258)
                      |++||||..
T Consensus       290 ll~h~~~~~  298 (313)
T 3cek_A          290 LLAHPYVQI  298 (313)
T ss_dssp             HHTSHHHHC
T ss_pred             HhcCccccC
Confidence            999999974

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.88  E-value=8.6e-06  Score=71.79  Aligned_cols=75  Identities=15%  Similarity=0.187  Sum_probs=55.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL--ILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~--~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+    .++..+|+        +|++|..||.+.   .....+.....  .++..++.++++||.+||..||.+|++
T Consensus       226 E~~~~----~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  298 (311)
T 3p1a_A          226 ELLQG----SYGTAADVFSLGLTILEVACNMELPHGG---EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRAT  298 (311)
T ss_dssp             GGGGT----CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             hHhcC----CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcC
Confidence            66664    46777773        888997776653   22334443322  234678999999999999999999998


Q ss_pred             CCCCCchhhccCCcccc
Q psy1025          78 SGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~   94 (258)
                      +     ++|++||||+.
T Consensus       299 ~-----~ell~hp~~~~  310 (311)
T 3p1a_A          299 A-----EALLALPVLRQ  310 (311)
T ss_dssp             H-----HHHHTSGGGSC
T ss_pred             H-----HHHHhCccccC
Confidence            5     99999999973

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.80  E-value=1.4e-06  Score=80.53  Aligned_cols=72  Identities=21%  Similarity=0.155  Sum_probs=56.6

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      ..|+..+|+        +|++|+.||.+.+....+..++..    ...++.++++||.+||..||.+|+++     .+++
T Consensus       292 ~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dP~~Rpt~-----~~~l  362 (413)
T 3dzo_A          292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS----CKNIPQPVRALLEGFLRYPKEDRLLP-----LQAM  362 (413)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSS----CCCCCHHHHHHHHHHTCSSGGGSCCH-----HHHT
T ss_pred             cCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhh----cccCCHHHHHHHHHHccCChhhCcCH-----HHHH
Confidence            346677773        889999999887655544444332    23578999999999999999999985     9999


Q ss_pred             cCCccccCC
Q psy1025          88 VHPFFRSIN   96 (258)
Q Consensus        88 ~HpfF~~id   96 (258)
                      +||||..+.
T Consensus       363 ~~~~~~~~~  371 (413)
T 3dzo_A          363 ETPEYEQLR  371 (413)
T ss_dssp             TSHHHHHHH
T ss_pred             hCHHHHHHH
Confidence            999998764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.79  E-value=3.1e-06  Score=74.84  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=53.4

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCC-CCCC----CCCCHHHHHHHHHHhhcccccccCCCCC
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGK-LILP----PYLTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~-~~~P----~~~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      ..++..+|.        +|++|..||...+. ......+.... ..++    ..++.++++||.+||..||.+|+++   
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~---  280 (327)
T 3aln_A          204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY---  280 (327)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH---
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH---
Confidence            457777773        88899999986432 22222222222 2222    3589999999999999999999985   


Q ss_pred             CchhhccCCccccCChh
Q psy1025          82 DGEAVRVHPFFRSINWS   98 (258)
Q Consensus        82 g~~eIk~HpfF~~idW~   98 (258)
                        .+|++||||...++.
T Consensus       281 --~ell~hp~~~~~~~~  295 (327)
T 3aln_A          281 --KELLKHPFILMYEER  295 (327)
T ss_dssp             --HHHTTSHHHHHHHHS
T ss_pred             --HHHHhChHHHHhHhh
Confidence              999999999866554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.76  E-value=1.8e-05  Score=71.67  Aligned_cols=97  Identities=9%  Similarity=0.096  Sum_probs=71.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+...++..|.... ...|..++.++.+||.+||..||.+|++
T Consensus       256 E~~~~---~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  332 (367)
T 3l9p_A          256 EAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN  332 (367)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcC
Confidence            55553   357888884        7787 999999999999988887754 5567789999999999999999999997


Q ss_pred             CCCCCchhhccCCccccCChhhhhcCCCCCCCcCcC
Q psy1025          78 SGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSL  113 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~  113 (258)
                      +     .+|.+|.++..-+.+.+ ...+++.+.|.+
T Consensus       333 ~-----~eil~~l~~~~~~~~~~-~~~~p~~~~~~~  362 (367)
T 3l9p_A          333 F-----AIILERIEYCTQDPDVI-NTALPIEYGPLV  362 (367)
T ss_dssp             H-----HHHHHHHHHHHHCHHHH-TCCCCCC-----
T ss_pred             H-----HHHHHHHHHHhhChhhc-cCCCccccCCch
Confidence            5     99999988865555433 334444455443

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=97.76  E-value=8.6e-06  Score=71.59  Aligned_cols=79  Identities=20%  Similarity=0.225  Sum_probs=63.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|.        +|++|.+||.+.+.......+.......+    ..++.++.+||.+||.+||.+|
T Consensus       189 E~~~~---~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  265 (311)
T 3ork_A          189 EQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR  265 (311)
T ss_dssp             HHHHT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHhcC---CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhC
Confidence            55553   356777773        88899999999988888777776654433    4589999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     .+++.|+|++-
T Consensus       266 ~~~-----~~~l~~~l~~~  279 (311)
T 3ork_A          266 YQT-----AAEMRADLVRV  279 (311)
T ss_dssp             CSS-----HHHHHHHHHHH
T ss_pred             hhh-----HHHHHHHHHHH
Confidence            986     88889998863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.74  E-value=6e-06  Score=72.40  Aligned_cols=78  Identities=12%  Similarity=0.115  Sum_probs=54.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL-PPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~-P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..|+..+|+        +|++|..|+..  .......+....+.. +...++++++||.+||..||.+|+++
T Consensus       246 E~~~~---~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  320 (332)
T 3qd2_B          246 EQIHG---NNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEA  320 (332)
T ss_dssp             HHHHC---CCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred             HHhcC---CCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCH
Confidence            55554   357777883        88888877643  233333444432221 12467889999999999999999985


Q ss_pred             CCCCchhhccCCccccC
Q psy1025          79 GPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~i   95 (258)
                           .+|++||||+++
T Consensus       321 -----~~~l~~~~f~~~  332 (332)
T 3qd2_B          321 -----TDIIENAIFENL  332 (332)
T ss_dssp             -----HHHHHSTTCCCC
T ss_pred             -----HHHhhchhhhcC
Confidence                 999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.72  E-value=1.5e-05  Score=75.54  Aligned_cols=97  Identities=10%  Similarity=0.087  Sum_probs=63.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKL-----ILPPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~-----~~P~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..++..+|+        +|++|..||.+.   +....+..|....+     .++..++.++.+||.+||..|
T Consensus       183 E~~~~---~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~d  259 (483)
T 3sv0_A          183 NTHLG---IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLR  259 (483)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCC
T ss_pred             HHhcC---CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCC
Confidence            45553   356777773        888999999763   34455555544322     223568899999999999999


Q ss_pred             cccccCCCCCCchhh----------ccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          72 VAQRLGSGPNDGEAV----------RVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        72 P~~RLg~~~~g~~eI----------k~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      |.+|+++     .+|          +.++|+..+||+.+..+...++..|.
T Consensus       260 P~~RPs~-----~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~~~~~~~p~  305 (483)
T 3sv0_A          260 FDDKPDY-----SYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIASAPP  305 (483)
T ss_dssp             TTCCCCH-----HHHHHHHHHHHHHTTCCCSSCCHHHHHTC----------
T ss_pred             hhhCcCH-----HHHHHHHHHHHHHcCCCccCCcCchhhccccccccCCCC
Confidence            9999975     433          45899999999998777666665553

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.67  E-value=3.1e-05  Score=65.79  Aligned_cols=75  Identities=13%  Similarity=0.243  Sum_probs=58.5

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+..+..++.++|        |+|++|..||.+.+.......+...  ...+|..++.++.+||.+||..||.+|++
T Consensus       178 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  257 (271)
T 3kmu_A          178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK  257 (271)
T ss_dssp             HHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            6666543444545677        3888999999998888877776654  45667889999999999999999999997


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      +     ++|.
T Consensus       258 ~-----~~il  262 (271)
T 3kmu_A          258 F-----DMIV  262 (271)
T ss_dssp             H-----HHHH
T ss_pred             H-----HHHH
Confidence            4     6665

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.62  E-value=1.6e-05  Score=70.41  Aligned_cols=91  Identities=14%  Similarity=0.204  Sum_probs=62.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC---CCHHHHHHHHHcCCCCCCC-----CCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA---DNRKKTIEKILRGKLILPP-----YLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~---~~~~~l~~~Il~~~~~~P~-----~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+   .+..+.+..|.......|.     .++ ++++||..||..|
T Consensus       187 E~~~~---~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~  262 (330)
T 2izr_A          187 NTHLG---KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLD  262 (330)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCC
T ss_pred             HHHcC---CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCC
Confidence            45553   457778884        88899999987   4556667777654443332     234 9999999999999


Q ss_pred             cccccCCCCCCchhhcc----------CCccccCChhhhhcCCCCCCCc
Q psy1025          72 VAQRLGSGPNDGEAVRV----------HPFFRSINWSDVLSRKLEPPFK  110 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~----------HpfF~~idW~~l~~r~~~pPf~  110 (258)
                      |.+|+++     ++|.+          ..+...+||+   .+.+++|+.
T Consensus       263 p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~---~~~~~~p~~  303 (330)
T 2izr_A          263 FFEKPDY-----DYLRKLFTDLFDRKGYMFDYEYDWI---GKQLPTPVG  303 (330)
T ss_dssp             TTCCCCH-----HHHHHHHHHHHHHTTCCCSCCCTTT---TSCCCCCC-
T ss_pred             CCCCCCH-----HHHHHHHHHHHHHcCCCCCCCccCC---CCCcCCCCC
Confidence            9999974     55532          3445578998   356666663

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.54  E-value=6.8e-05  Score=64.09  Aligned_cols=74  Identities=11%  Similarity=0.177  Sum_probs=59.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |.+||...+...+...+... ....|..++.++.+||.+||..||.+|++
T Consensus       177 E~~~~---~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  253 (269)
T 4hcu_A          177 EVFSF---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA  253 (269)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcC
Confidence            45553   357777773        7778 99999999999988888775 45567788999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      .     .+|.+|
T Consensus       254 ~-----~~ll~~  260 (269)
T 4hcu_A          254 F-----SRLLRQ  260 (269)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            4     777654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.53  E-value=2.1e-05  Score=77.81  Aligned_cols=95  Identities=16%  Similarity=0.106  Sum_probs=62.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHH---------H-----HHcCCCCC------CC----C
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIE---------K-----ILRGKLIL------PP----Y   55 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~---------~-----Il~~~~~~------P~----~   55 (258)
                      |++.+   ..++..+|+        +|++|..||........+.         .     +..+.+.+      |.    .
T Consensus       193 E~l~~---~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~  269 (676)
T 3qa8_A          193 ELLEQ---KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI  269 (676)
T ss_dssp             CSSCC---SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGG
T ss_pred             HHhcc---CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchh
Confidence            55554   356777773        8889999997654332110         0     11111222      11    2


Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCc
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      ++.++.+||.+||..||.+|+++     .+++.||||..  ++.++.+++-.+|...
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa-----~elL~hp~F~~--l~~iL~~kil~~f~~~  319 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTD-----PQNPNVGCFQA--LDSILSLKLLSVMNMV  319 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CC-----TTCCCCTTHHH--HHHHHCCCEEECCCSS
T ss_pred             hhHHHHHHHHHHccCCHhhCcCH-----HHHhcCHHHHH--HHHHHhcccccccccc
Confidence            56889999999999999999986     89999999985  6788888776666543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=97.52  E-value=5.9e-05  Score=66.57  Aligned_cols=75  Identities=9%  Similarity=0.117  Sum_probs=61.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|.        +|++ |.+||...+...+...+... ....|..++.++.+||.+||..||.+|+++     .+|
T Consensus       221 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l  295 (327)
T 2yfx_A          221 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF-----AII  295 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCH-----HHH
Confidence            46777773        7787 99999998888888887765 345667899999999999999999999974     999


Q ss_pred             ccCCccccCC
Q psy1025          87 RVHPFFRSIN   96 (258)
Q Consensus        87 k~HpfF~~id   96 (258)
                      .+|.|+..-+
T Consensus       296 l~~l~~~~~~  305 (327)
T 2yfx_A          296 LERIEYCTQD  305 (327)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9998875433

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.49  E-value=0.0001  Score=64.97  Aligned_cols=73  Identities=14%  Similarity=0.229  Sum_probs=58.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKIL--RGKLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il--~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++|..||.+.+.......+.  .....+|..++.++.+||.+||..||.+|++
T Consensus       209 E~~~~---~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  285 (309)
T 3p86_A          209 EVLRD---EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS  285 (309)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence            55654   356677773        8889999999988888877764  3456778899999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       286 ~-----~~ll~  291 (309)
T 3p86_A          286 F-----ATIMD  291 (309)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     77764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.38  E-value=0.00015  Score=61.55  Aligned_cols=68  Identities=12%  Similarity=0.186  Sum_probs=55.6

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++ |.+||...+...+...|... ....|..++.++.+||.+||..||.+|++.     .+
T Consensus       180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~  254 (267)
T 3t9t_A          180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAF-----SR  254 (267)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCH-----HH
Confidence            356677773        7788 99999999998888888776 345567789999999999999999999974     77


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       255 ll~  257 (267)
T 3t9t_A          255 LLR  257 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.37  E-value=0.00014  Score=62.03  Aligned_cols=69  Identities=13%  Similarity=0.081  Sum_probs=55.4

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++|..||.+.+.......+....  ..+|..++.++++||.+||..||.+|+++     .+
T Consensus       189 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e  263 (271)
T 3dtc_A          189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSF-----TN  263 (271)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCH-----HH
Confidence            346777773        8889999999988887777776554  44567899999999999999999999975     77


Q ss_pred             hccC
Q psy1025          86 VRVH   89 (258)
Q Consensus        86 Ik~H   89 (258)
                      |.+|
T Consensus       264 ~l~~  267 (271)
T 3dtc_A          264 ILDQ  267 (271)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.36  E-value=8.1e-05  Score=65.65  Aligned_cols=68  Identities=16%  Similarity=0.194  Sum_probs=56.1

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+...++..+... .+..|..++.++++||.+||..||.+|+++     ++|
T Consensus       217 ~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~el  291 (327)
T 1fvr_A          217 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQI  291 (327)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             cCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            45666773        7887 99999999998888887765 455677899999999999999999999974     888


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .+|
T Consensus       292 l~~  294 (327)
T 1fvr_A          292 LVS  294 (327)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            765

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.36  E-value=6.2e-05  Score=65.05  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=56.5

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||...+...+...|.... ..+|..++.++.+||.+||..||.+|+++     .+|
T Consensus       189 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l  263 (287)
T 1u59_A          189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDF-----LTV  263 (287)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            35566673        7887 999999888888888877654 56788899999999999999999999974     888


Q ss_pred             ccCC
Q psy1025          87 RVHP   90 (258)
Q Consensus        87 k~Hp   90 (258)
                      .+|.
T Consensus       264 ~~~l  267 (287)
T 1u59_A          264 EQRM  267 (287)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7663

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.35  E-value=0.0001  Score=63.54  Aligned_cols=68  Identities=9%  Similarity=0.004  Sum_probs=48.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLI-----LPPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~-----~P~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..++..+|.        +|++|.+||.+.   +....+..|......     ++..++.++++||.+||..|
T Consensus       188 E~~~~---~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  264 (298)
T 1csn_A          188 NTHLG---REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLA  264 (298)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCC
T ss_pred             hhhcC---CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCC
Confidence            44543   346777773        888999999873   455555555443222     23468999999999999999


Q ss_pred             cccccCC
Q psy1025          72 VAQRLGS   78 (258)
Q Consensus        72 P~~RLg~   78 (258)
                      |.+|+++
T Consensus       265 p~~RP~~  271 (298)
T 1csn_A          265 FDATPDY  271 (298)
T ss_dssp             TTCCCCH
T ss_pred             cccCCCH
Confidence            9999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.35  E-value=4.6e-05  Score=65.64  Aligned_cols=85  Identities=8%  Similarity=0.134  Sum_probs=57.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH---HHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR---KKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~---~~l~~~Il~~~~~~P-----~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..++..+|.        +|++|.+||.+.+.   ...+..+....+..|     ..++.++.+||.+||..|
T Consensus       185 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  261 (296)
T 4hgt_A          185 NTHLG---IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLR  261 (296)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSC
T ss_pred             HHhcC---CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcC
Confidence            44553   346777773        88899999976432   233344443333333     568999999999999999


Q ss_pred             cccccCCCCCCchhhcc----------CCccccCChhhh
Q psy1025          72 VAQRLGSGPNDGEAVRV----------HPFFRSINWSDV  100 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~----------HpfF~~idW~~l  100 (258)
                      |.+|+++     .+|.+          ..+-..+||+.+
T Consensus       262 p~~Rpt~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          262 FDDKPDY-----SYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             TTCCCCH-----HHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             CCCCCCH-----HHHHHHHHHHHHHhCCCccCccchhhc
Confidence            9999975     55543          455666788765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.34  E-value=0.00014  Score=62.41  Aligned_cols=74  Identities=12%  Similarity=0.145  Sum_probs=59.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |.+||...+.......|.... ...|..++.++.+||.+||..||.+|++
T Consensus       191 E~~~~---~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  267 (283)
T 3gen_A          191 EVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT  267 (283)
T ss_dssp             HHHHH---CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             HHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcC
Confidence            45553   357777773        7787 999999999988888887763 4556778999999999999999999998


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      .     .+|++|
T Consensus       268 ~-----~~ll~~  274 (283)
T 3gen_A          268 F-----KILLSN  274 (283)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     777755

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.31  E-value=0.00019  Score=63.32  Aligned_cols=67  Identities=13%  Similarity=0.101  Sum_probs=56.0

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |..||.+.+...+...|..... .+|..++.++.+||.+||..||.+|+++     .+|
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~~  326 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF-----CSI  326 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCH-----HHH
Confidence            46777773        7887 9999999999888888887654 5677899999999999999999999974     777


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       327 ~~  328 (343)
T 1luf_A          327 HR  328 (343)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.31  E-value=4.5e-05  Score=65.82  Aligned_cols=68  Identities=7%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLILP-----PYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~~P-----~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..++..+|.        +|++|+.||.+.   +....+..|....+..|     ..++.++.+||.+||..|
T Consensus       185 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  261 (296)
T 3uzp_A          185 NTHLG---IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLR  261 (296)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSC
T ss_pred             hhhcC---CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcC
Confidence            45553   346777773        889999999863   22334444444333333     678999999999999999


Q ss_pred             cccccCC
Q psy1025          72 VAQRLGS   78 (258)
Q Consensus        72 P~~RLg~   78 (258)
                      |.+|+++
T Consensus       262 p~~Rps~  268 (296)
T 3uzp_A          262 FDDKPDY  268 (296)
T ss_dssp             TTCCCCH
T ss_pred             cCcCCCH
Confidence            9999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.29  E-value=0.00013  Score=62.77  Aligned_cols=68  Identities=21%  Similarity=0.266  Sum_probs=55.1

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|+        +|++ |.+||.+.+...+...|.... ..+|..++.++.+||.+||..||.+|+++     .+
T Consensus       192 ~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~  266 (281)
T 1mp8_A          192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF-----TE  266 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HH
Confidence            356777773        6775 999999888888888887653 56778899999999999999999999974     77


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       267 l~~  269 (281)
T 1mp8_A          267 LKA  269 (281)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=97.27  E-value=0.00026  Score=64.21  Aligned_cols=74  Identities=11%  Similarity=0.081  Sum_probs=59.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |.+||.+.+...+...+... ....|..++.++.+||.+||..||.+|++
T Consensus       263 E~~~~---~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  339 (382)
T 3tt0_A          263 EALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT  339 (382)
T ss_dssp             HHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence            45553   356777773        7787 99999999998888888765 45667789999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|.++
T Consensus       340 ~-----~ell~~  346 (382)
T 3tt0_A          340 F-----KQLVED  346 (382)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     788764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=97.21  E-value=0.0002  Score=64.82  Aligned_cols=74  Identities=11%  Similarity=0.071  Sum_probs=59.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+..+++..+.... ...|..++.++.+||.+||..||.+|++
T Consensus       275 E~~~~---~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt  351 (370)
T 2psq_A          275 EALFD---RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPT  351 (370)
T ss_dssp             HHHHT---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHhcC---CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            55553   457788884        7887 999999988888888777653 5667789999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|.++
T Consensus       352 ~-----~ell~~  358 (370)
T 2psq_A          352 F-----KQLVED  358 (370)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            4     777643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.16  E-value=0.0002  Score=61.50  Aligned_cols=59  Identities=15%  Similarity=0.091  Sum_probs=50.0

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGKL--ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~~--~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |.+||.+.+...+...+.....  ..+..++.++++||.+||..||.+|+++     .+|.+
T Consensus       216 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  277 (291)
T 1u46_A          216 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF-----VALRD  277 (291)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence            7888 9999999999998888876543  4456799999999999999999999974     77764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.16  E-value=0.00016  Score=62.88  Aligned_cols=68  Identities=10%  Similarity=0.095  Sum_probs=54.9

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+...++..+.... ...|..++.++.+||.+||..||.+|+++     .+|
T Consensus       228 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~~l  302 (314)
T 2ivs_A          228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVF-----ADI  302 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            35666673        7888 999999988888887776653 55677899999999999999999999974     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .++
T Consensus       303 ~~~  305 (314)
T 2ivs_A          303 SKD  305 (314)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.15  E-value=0.00021  Score=63.50  Aligned_cols=74  Identities=12%  Similarity=0.165  Sum_probs=55.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHH-HHHHc-CCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTI-EKILR-GKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~-~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|.        +|++ |.+||.+.+....+ ..+.. .....|..+++++.+||.+||..||.+|+
T Consensus       265 E~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  341 (359)
T 3vhe_A          265 ETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP  341 (359)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhhcC---CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCC
Confidence            45553   356777773        7887 99999886644433 33443 34567788999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     .+|.+|
T Consensus       342 s~-----~ell~~  349 (359)
T 3vhe_A          342 TF-----SELVEH  349 (359)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            74     788765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.14  E-value=0.0003  Score=60.43  Aligned_cols=68  Identities=10%  Similarity=0.118  Sum_probs=54.8

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|+        +|++ |.+||.+.+...+...+... ....|..++.++.+||.+||..||.+|+++     .+
T Consensus       187 ~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~  261 (288)
T 3kfa_A          187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF-----AE  261 (288)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCH-----HH
Confidence            356777773        7788 99999988887777777654 456677899999999999999999999975     77


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       262 ~~~  264 (288)
T 3kfa_A          262 IHQ  264 (288)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.13  E-value=0.0002  Score=60.92  Aligned_cols=68  Identities=10%  Similarity=0.097  Sum_probs=54.4

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||...+.......+.... ...|..++.++.+||.+||..||.+|+++     .+|
T Consensus       181 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l  255 (268)
T 3sxs_A          181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTF-----QQL  255 (268)
T ss_dssp             EEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCH-----HHH
T ss_pred             CCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCH-----HHH
Confidence            35556663        7787 999999988888888877654 44566789999999999999999999975     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .+|
T Consensus       256 l~~  258 (268)
T 3sxs_A          256 LSS  258 (268)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.13  E-value=0.00023  Score=62.06  Aligned_cols=69  Identities=13%  Similarity=0.187  Sum_probs=56.2

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++ |.+||.+.+...++..+... ...+|..++.++.+||.+||..||.+|+++     .+
T Consensus       224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~  298 (313)
T 3brb_A          224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF-----SV  298 (313)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCH-----HH
T ss_pred             CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCH-----HH
Confidence            356777773        7788 99999988888888887765 456677899999999999999999999974     77


Q ss_pred             hccC
Q psy1025          86 VRVH   89 (258)
Q Consensus        86 Ik~H   89 (258)
                      |+++
T Consensus       299 l~~~  302 (313)
T 3brb_A          299 LRLQ  302 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.12  E-value=0.00032  Score=62.12  Aligned_cols=66  Identities=17%  Similarity=0.161  Sum_probs=54.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |..||.+.+...+...+... .+..|..++.++.+||.+||..||.+|+++     .+|
T Consensus       230 ~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~ei  304 (325)
T 3kul_A          230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRF-----SQI  304 (325)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            46666773        7777 99999999998888888765 456677899999999999999999999974     666


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       305 l  305 (325)
T 3kul_A          305 V  305 (325)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.11  E-value=0.00026  Score=60.79  Aligned_cols=69  Identities=19%  Similarity=0.167  Sum_probs=54.1

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++ |.+||...+.......+... .+..|..+++.+.+||.+||..||.+|+++     .+
T Consensus       189 ~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~e  263 (281)
T 3cc6_A          189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRF-----TE  263 (281)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCH-----HH
Confidence            346667773        7887 99999877777777666654 455677899999999999999999999974     77


Q ss_pred             hccC
Q psy1025          86 VRVH   89 (258)
Q Consensus        86 Ik~H   89 (258)
                      |.++
T Consensus       264 ll~~  267 (281)
T 3cc6_A          264 LVCS  267 (281)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.11  E-value=0.00041  Score=61.55  Aligned_cols=74  Identities=14%  Similarity=0.120  Sum_probs=58.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|.        +|++ |..||...+...+...|... .+..|..++.++.+||.+||..||.+|++
T Consensus       220 E~~~~---~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  296 (333)
T 1mqb_A          220 EAISY---RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPK  296 (333)
T ss_dssp             HHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCC
T ss_pred             hhccc---CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcC
Confidence            55553   457777773        6777 99999998888888888765 45566789999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      .     .+|.++
T Consensus       297 ~-----~~l~~~  303 (333)
T 1mqb_A          297 F-----ADIVSI  303 (333)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            4     777653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.06  E-value=0.00021  Score=61.45  Aligned_cols=74  Identities=14%  Similarity=0.153  Sum_probs=53.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+  ...++..+|.        +|++ |.+||...+... ...+......+|...+.++++||.+||..||.+|+++
T Consensus       187 E~~~~--~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  263 (289)
T 4fvq_A          187 ECIEN--PKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSF  263 (289)
T ss_dssp             HHHHC--GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCH
T ss_pred             HHhCC--CCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            55553  2457777783        7888 456665555444 3445556677788889999999999999999999974


Q ss_pred             CCCCchhhccC
Q psy1025          79 GPNDGEAVRVH   89 (258)
Q Consensus        79 ~~~g~~eIk~H   89 (258)
                           .+|.+|
T Consensus       264 -----~~ll~~  269 (289)
T 4fvq_A          264 -----RAIIRD  269 (289)
T ss_dssp             -----HHHHHH
T ss_pred             -----HHHHHH
Confidence                 777654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=97.06  E-value=0.00034  Score=59.92  Aligned_cols=67  Identities=15%  Similarity=0.201  Sum_probs=53.9

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++ |.+||...+...+...+... ....|..+++++.+||.+||..||.+|++.     .+
T Consensus       189 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~  263 (278)
T 1byg_A          189 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF-----LQ  263 (278)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCH-----HH
Confidence            356777773        7787 99999988887777777654 456677899999999999999999999974     66


Q ss_pred             hc
Q psy1025          86 VR   87 (258)
Q Consensus        86 Ik   87 (258)
                      |.
T Consensus       264 l~  265 (278)
T 1byg_A          264 LR  265 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.04  E-value=0.0003  Score=62.18  Aligned_cols=70  Identities=11%  Similarity=0.054  Sum_probs=53.6

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++..+|+        +|++ |.+||.+.+....+..++..  ....|..++.++.+||.+||..||.+|+++     .
T Consensus       249 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~  323 (344)
T 1rjb_A          249 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF-----P  323 (344)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----H
T ss_pred             CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCH-----H
Confidence            346777773        7887 99999887655555555543  345567899999999999999999999985     8


Q ss_pred             hhccCC
Q psy1025          85 AVRVHP   90 (258)
Q Consensus        85 eIk~Hp   90 (258)
                      +|.+|.
T Consensus       324 ~l~~~l  329 (344)
T 1rjb_A          324 NLTSFL  329 (344)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.04  E-value=0.00062  Score=59.23  Aligned_cols=68  Identities=12%  Similarity=0.185  Sum_probs=51.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI-----LPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~-----~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+.......++.....     ++..++..+.++|.+||.+||.+
T Consensus       182 E~~~~---~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  258 (294)
T 4eqm_A          182 EQAKG---EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKAN  258 (294)
T ss_dssp             HHHHT---CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hHhcC---CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhH
Confidence            45554   346666773        889999999998887776666554332     34568999999999999999999


Q ss_pred             ccCC
Q psy1025          75 RLGS   78 (258)
Q Consensus        75 RLg~   78 (258)
                      |++.
T Consensus       259 R~~~  262 (294)
T 4eqm_A          259 RYKT  262 (294)
T ss_dssp             SCSS
T ss_pred             cccc
Confidence            9964

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.03  E-value=0.00047  Score=58.96  Aligned_cols=59  Identities=17%  Similarity=0.296  Sum_probs=49.5

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++ |.+||.+.+..++...+... ....|..++.++.+||.+||..||.+|++.     ++|.+
T Consensus       202 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~l~~  262 (279)
T 1qpc_A          202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF-----DYLRS  262 (279)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCH-----HHHHH
Confidence            7788 99999998888888887765 345667899999999999999999999974     67653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.03  E-value=0.00036  Score=60.28  Aligned_cols=58  Identities=16%  Similarity=0.174  Sum_probs=49.6

Q ss_pred             hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++ |.+||.+.+...+...+.... ..+|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       212 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l~  271 (291)
T 1xbb_A          212 EAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVE  271 (291)
T ss_dssp             HHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHH
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            7888 999999988888888877653 56678899999999999999999999975     6665

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.03  E-value=6.5e-05  Score=66.05  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=49.6

Q ss_pred             CCCCceehH--------hhhcCCCCCCCC----CHHHHHHHHHcCCC-------------------CCC------CCCCH
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTAD----NRKKTIEKILRGKL-------------------ILP------PYLTP   58 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~----~~~~l~~~Il~~~~-------------------~~P------~~~S~   58 (258)
                      ..++.++|+        +|++|.+||...    ....++..|+...+                   .+|      ..++.
T Consensus       198 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (319)
T 4euu_A          198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQV  277 (319)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHH
Confidence            456777773        889999999632    23455555654332                   112      23456


Q ss_pred             HHHHHHHHHhhcccccccCCCCCCchhhccCC
Q psy1025          59 DARELIRKLLKRQVAQRLGSGPNDGEAVRVHP   90 (258)
Q Consensus        59 ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~Hp   90 (258)
                      .+.+||++||..||.+|+++     +++++||
T Consensus       278 ~l~~ll~~~L~~dP~~R~s~-----~ell~h~  304 (319)
T 4euu_A          278 LLTPVLANILEADQEKCWGF-----DQFFAET  304 (319)
T ss_dssp             HHHHHHHHHSCCCTTTSCCH-----HHHHHHH
T ss_pred             HhHHHHHHhccCChhhhccH-----HHhhhcc
Confidence            88999999999999999985     9998886

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.02  E-value=0.00059  Score=63.49  Aligned_cols=72  Identities=13%  Similarity=0.182  Sum_probs=57.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+..++...|... .+..|..++.++.+||.+||..||.+|++
T Consensus       355 E~~~~---~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt  431 (454)
T 1qcf_A          355 EAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT  431 (454)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcc---CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcC
Confidence            45543   357777783        7887 99999998888888887764 45567789999999999999999999998


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      .     ++|.
T Consensus       432 ~-----~~i~  436 (454)
T 1qcf_A          432 F-----EYIQ  436 (454)
T ss_dssp             H-----HHHH
T ss_pred             H-----HHHH
Confidence            5     6665

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.99  E-value=0.00042  Score=61.29  Aligned_cols=68  Identities=12%  Similarity=0.077  Sum_probs=55.2

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|+        +|++ |.+||.+.+..+++..+.... ...|..++.++.+||.+||..||.+|+++     .+|
T Consensus       235 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~el  309 (334)
T 2pvf_A          235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTF-----KQL  309 (334)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            35566673        7777 999999999888888877653 55677899999999999999999999974     777


Q ss_pred             ccC
Q psy1025          87 RVH   89 (258)
Q Consensus        87 k~H   89 (258)
                      .++
T Consensus       310 l~~  312 (334)
T 2pvf_A          310 VED  312 (334)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.98  E-value=0.00044  Score=61.32  Aligned_cols=73  Identities=16%  Similarity=0.158  Sum_probs=57.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+...+...+... .+..|..++.++.+||.+||..||.+|++
T Consensus       189 E~~~~---~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  265 (327)
T 3lzb_A          189 ESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK  265 (327)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHcC---CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcC
Confidence            45553   357777883        7788 99999988887777776654 35567789999999999999999999998


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       266 ~-----~ell~  271 (327)
T 3lzb_A          266 F-----RELII  271 (327)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     77764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.96  E-value=0.00041  Score=60.25  Aligned_cols=69  Identities=14%  Similarity=0.186  Sum_probs=52.0

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHH-HHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKK-TIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~-l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ..++..+|+        +|++ |.+||.+.+... ....+... ....|..++.++.+||.+||..||.+|+++     .
T Consensus       225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~  299 (316)
T 2xir_A          225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF-----S  299 (316)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----H
T ss_pred             ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----H
Confidence            356777773        7787 999998765433 33444443 456677899999999999999999999974     8


Q ss_pred             hhccC
Q psy1025          85 AVRVH   89 (258)
Q Consensus        85 eIk~H   89 (258)
                      +|.+|
T Consensus       300 ell~~  304 (316)
T 2xir_A          300 ELVEH  304 (316)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=96.94  E-value=0.0005  Score=59.08  Aligned_cols=74  Identities=15%  Similarity=0.163  Sum_probs=52.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHH--HHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKK--TIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~--l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+. ...++..+|+        +|++|..||...+...  ....+...  ...+|..++.++++||.+||..||.+|
T Consensus       196 E~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  274 (287)
T 4f0f_A          196 ETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR  274 (287)
T ss_dssp             GGSSCS-SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhccC-CCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhC
Confidence            555432 2346677773        8889999997654332  24444433  345677899999999999999999999


Q ss_pred             cCCCCCCchhhc
Q psy1025          76 LGSGPNDGEAVR   87 (258)
Q Consensus        76 Lg~~~~g~~eIk   87 (258)
                      +++     ++|.
T Consensus       275 ps~-----~~ll  281 (287)
T 4f0f_A          275 PHF-----SYIV  281 (287)
T ss_dssp             CCH-----HHHH
T ss_pred             cCH-----HHHH
Confidence            975     6665

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.94  E-value=0.00043  Score=61.22  Aligned_cols=74  Identities=15%  Similarity=0.127  Sum_probs=57.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+...+...+... .+..|..++.++.+||.+||..||.+|++
T Consensus       189 E~~~~---~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  265 (327)
T 3poz_A          189 ESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK  265 (327)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCC
T ss_pred             HHhcc---CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCC
Confidence            45553   357777783        7788 99999988877777766654 35567789999999999999999999998


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      .     .+|..+
T Consensus       266 ~-----~ell~~  272 (327)
T 3poz_A          266 F-----RELIIE  272 (327)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     777655

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=96.92  E-value=0.00057  Score=59.06  Aligned_cols=75  Identities=19%  Similarity=0.237  Sum_probs=50.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH-HHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhcccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR-KKTIEKILRGKLI-----LPPYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~-~~l~~~Il~~~~~-----~P~~~S~ea~dLI~~LL~kdP~   73 (258)
                      |++.......++..+|.        +|++|..||.+.+. ..+...+....+.     ++..++.++++||.+||..||.
T Consensus       192 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  271 (289)
T 3og7_A          192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRD  271 (289)
T ss_dssp             HHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGG
T ss_pred             hhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChh
Confidence            45543223456777773        88899999987544 4444444444322     2346789999999999999999


Q ss_pred             cccCCCCCCchhhc
Q psy1025          74 QRLGSGPNDGEAVR   87 (258)
Q Consensus        74 ~RLg~~~~g~~eIk   87 (258)
                      +|+++     .+|+
T Consensus       272 ~Rps~-----~ell  280 (289)
T 3og7_A          272 ERPSF-----PRIL  280 (289)
T ss_dssp             GSCCH-----HHHH
T ss_pred             hCCCH-----HHHH
Confidence            99974     6665

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.92  E-value=0.00074  Score=65.97  Aligned_cols=72  Identities=13%  Similarity=0.130  Sum_probs=59.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+..++...|.... ..+|..++.++.+||.+||..||.+|++
T Consensus       542 E~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs  618 (635)
T 4fl3_A          542 ECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG  618 (635)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hhhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence            55553   467888884        7887 999999999998888887654 5678889999999999999999999998


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      +     .+|.
T Consensus       619 ~-----~~l~  623 (635)
T 4fl3_A          619 F-----AAVE  623 (635)
T ss_dssp             H-----HHHH
T ss_pred             H-----HHHH
Confidence            5     6665

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.92  E-value=0.0006  Score=63.41  Aligned_cols=72  Identities=14%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+..++...|..+ .+..|..++.++.+||.+||..||.+|++
T Consensus       356 E~~~~---~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt  432 (450)
T 1k9a_A          356 EALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPT  432 (450)
T ss_dssp             HHHHS---SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcC
Confidence            55553   457777883        7887 99999988777777777665 46677889999999999999999999998


Q ss_pred             CCCCCchhhc
Q psy1025          78 SGPNDGEAVR   87 (258)
Q Consensus        78 ~~~~g~~eIk   87 (258)
                      +     .+|.
T Consensus       433 ~-----~~l~  437 (450)
T 1k9a_A          433 F-----LQLR  437 (450)
T ss_dssp             H-----HHHH
T ss_pred             H-----HHHH
Confidence            5     6664

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.91  E-value=0.001  Score=58.09  Aligned_cols=73  Identities=11%  Similarity=0.067  Sum_probs=50.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|+        +|++|.+||.+.+...+...+....   ..++..++.++.+||.+||..||.+|+
T Consensus       205 E~~~~---~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  281 (309)
T 2h34_A          205 ERFSE---SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRY  281 (309)
T ss_dssp             GGTCC-------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSC
T ss_pred             HHHcC---CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHH
Confidence            55554   345666773        8889999999877665544444332   234567899999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      +.    ++++.
T Consensus       282 ~s----~~~l~  288 (309)
T 2h34_A          282 VT----CGDLS  288 (309)
T ss_dssp             SS----HHHHH
T ss_pred             Hh----HHHHH
Confidence            53    46665

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.88  E-value=0.00095  Score=62.06  Aligned_cols=67  Identities=15%  Similarity=0.279  Sum_probs=55.3

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|.        +|++ |.+||.+.+..++...+..+ .+..|..++.++.+||.+||..||.+|+++     ++|
T Consensus       357 ~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~~l  431 (452)
T 1fmk_A          357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-----EYL  431 (452)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH-----HHH
Confidence            46777773        7888 99999998888888887765 455677899999999999999999999985     777


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       432 ~~  433 (452)
T 1fmk_A          432 QA  433 (452)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.82  E-value=0.00048  Score=59.72  Aligned_cols=68  Identities=9%  Similarity=0.114  Sum_probs=50.6

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|.        +|++ |.+||.+.+....+..++..  ....|..++.++.+||.+||..||.+|+++     .+
T Consensus       223 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~e  297 (313)
T 1t46_A          223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTF-----KQ  297 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCH-----HH
Confidence            46777773        7787 99999887655544444432  334466799999999999999999999974     77


Q ss_pred             hccC
Q psy1025          86 VRVH   89 (258)
Q Consensus        86 Ik~H   89 (258)
                      |.++
T Consensus       298 ll~~  301 (313)
T 1t46_A          298 IVQL  301 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=96.77  E-value=0.0012  Score=64.80  Aligned_cols=73  Identities=19%  Similarity=0.242  Sum_probs=58.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+.++|+        +|++ |.+||.+.+...+...|.... +.+|..++.++.+||.+||..||.+|++
T Consensus       562 E~~~~---~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs  638 (656)
T 2j0j_A          562 ESINF---RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPR  638 (656)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcC
Confidence            45553   357777883        7776 999999999988888887653 5678889999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|++
T Consensus       639 ~-----~el~~  644 (656)
T 2j0j_A          639 F-----TELKA  644 (656)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            4     67653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=96.74  E-value=0.0016  Score=56.65  Aligned_cols=67  Identities=12%  Similarity=0.011  Sum_probs=53.3

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL--PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~--P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .++..+|.        +|++|..||...+...+...+.......  +..++.++.+||.+||..||.+|+++     .+|
T Consensus       219 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~l  293 (319)
T 2y4i_B          219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTF-----TKL  293 (319)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCH-----HHH
Confidence            46777783        8889999999998888888877654322  23588999999999999999999974     777


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      .+
T Consensus       294 ~~  295 (319)
T 2y4i_B          294 MD  295 (319)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.72  E-value=0.0015  Score=62.31  Aligned_cols=67  Identities=15%  Similarity=0.279  Sum_probs=55.2

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .|+..+|+        +|++ |..||.+.+..++...|... .+..|..++.++.+||.+||..||.+|+++     ++|
T Consensus       440 ~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~~l  514 (535)
T 2h8h_A          440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-----EYL  514 (535)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHH
Confidence            46777773        7888 99999998888888887765 355677899999999999999999999985     777


Q ss_pred             cc
Q psy1025          87 RV   88 (258)
Q Consensus        87 k~   88 (258)
                      ..
T Consensus       515 ~~  516 (535)
T 2h8h_A          515 QA  516 (535)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=96.71  E-value=0.00055  Score=59.79  Aligned_cols=74  Identities=19%  Similarity=0.210  Sum_probs=44.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL--PPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~--P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.......++..+|+        +|++|..||...+...    ++...+..  +...+..+.+||.+||..||.+|++
T Consensus       220 E~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  295 (337)
T 3ll6_A          220 EIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS  295 (337)
T ss_dssp             ----CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCC
T ss_pred             hhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----hhcCcccCCcccccchHHHHHHHHHccCChhhCcC
Confidence            55532223456777783        8889999997654433    33333333  3467889999999999999999997


Q ss_pred             CCCCCchhhccCC
Q psy1025          78 SGPNDGEAVRVHP   90 (258)
Q Consensus        78 ~~~~g~~eIk~Hp   90 (258)
                      +     .+|.+|-
T Consensus       296 ~-----~e~l~~l  303 (337)
T 3ll6_A          296 I-----AEVVHQL  303 (337)
T ss_dssp             H-----HHHHHHH
T ss_pred             H-----HHHHHHH
Confidence            4     8888763

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=96.67  E-value=0.00099  Score=64.70  Aligned_cols=68  Identities=13%  Similarity=0.140  Sum_probs=56.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+..++...|..+. +.+|..++.++.+||.+||..||.+|++
T Consensus       509 E~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs  585 (613)
T 2ozo_A          509 ECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD  585 (613)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCC
T ss_pred             hhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcC
Confidence            45553   457778883        7887 999999988888888887653 5678889999999999999999999998


Q ss_pred             C
Q psy1025          78 S   78 (258)
Q Consensus        78 ~   78 (258)
                      +
T Consensus       586 ~  586 (613)
T 2ozo_A          586 F  586 (613)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=96.67  E-value=0.0014  Score=56.36  Aligned_cols=73  Identities=14%  Similarity=0.137  Sum_probs=54.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|.        +|++ |.+||...+...+...+.... ...|..++.++.+||.+||..||.+|++
T Consensus       198 E~~~~---~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  274 (298)
T 3pls_A          198 ESLQT---YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPT  274 (298)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhcc---CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcC
Confidence            45553   356777773        7778 667777777777777766543 5567789999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       275 ~-----~~ll~  280 (298)
T 3pls_A          275 F-----RVLVG  280 (298)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            4     66653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=96.66  E-value=0.0011  Score=60.06  Aligned_cols=66  Identities=14%  Similarity=0.118  Sum_probs=52.9

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .|+..+|+        +|++ |.+||.+.+...+...+... .+..|..++.++.+||.+||..||.+|+++     .+|
T Consensus       291 ~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~~i  365 (377)
T 3cbl_A          291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSF-----STI  365 (377)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCH-----HHH
Confidence            35566673        7787 99999998888877777654 456677899999999999999999999975     666


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       366 ~  366 (377)
T 3cbl_A          366 Y  366 (377)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=96.65  E-value=0.00077  Score=59.25  Aligned_cols=67  Identities=7%  Similarity=0.091  Sum_probs=50.8

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      .++..+|+        +|++ |.+||.+......+..++..  ....|...+.++.+||.+||..||.+|+++     .+
T Consensus       242 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~  316 (333)
T 2i1m_A          242 VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF-----QQ  316 (333)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCH-----HH
Confidence            46677773        7787 99999887655555555443  344567789999999999999999999975     77


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       317 l~~  319 (333)
T 2i1m_A          317 ICS  319 (333)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=96.61  E-value=0.0019  Score=56.38  Aligned_cols=73  Identities=11%  Similarity=0.094  Sum_probs=52.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC--CHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD--NRKKTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~--~~~~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..++..+|.        +|++|+.||...  ....+...+.. ....++..++.++.+||.+||..||.+|+
T Consensus       173 E~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  249 (307)
T 2eva_A          173 EVFEG---SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP  249 (307)
T ss_dssp             HHHTC---CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhhCC---CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCc
Confidence            55554   356777773        888999999753  33334444443 33455678999999999999999999999


Q ss_pred             CCCCCCchhhcc
Q psy1025          77 GSGPNDGEAVRV   88 (258)
Q Consensus        77 g~~~~g~~eIk~   88 (258)
                      ++     ++|.+
T Consensus       250 s~-----~ell~  256 (307)
T 2eva_A          250 SM-----EEIVK  256 (307)
T ss_dssp             CH-----HHHHH
T ss_pred             CH-----HHHHH
Confidence            75     77765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.56  E-value=0.001  Score=62.69  Aligned_cols=66  Identities=11%  Similarity=0.126  Sum_probs=53.2

Q ss_pred             CCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhh
Q psy1025          17 AHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV   86 (258)
Q Consensus        17 gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eI   86 (258)
                      .|+..+|+        +|++ |.+||.+.+...++..+... .+..|..++.++.+||.+||..||.+|+++     .+|
T Consensus       395 ~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~el  469 (495)
T 1opk_A          395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF-----AEI  469 (495)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHH
T ss_pred             CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCH-----HHH
Confidence            45666773        7787 99999988887777776654 456677899999999999999999999985     676


Q ss_pred             c
Q psy1025          87 R   87 (258)
Q Consensus        87 k   87 (258)
                      .
T Consensus       470 ~  470 (495)
T 1opk_A          470 H  470 (495)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=96.54  E-value=0.00096  Score=60.58  Aligned_cols=74  Identities=18%  Similarity=0.223  Sum_probs=56.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+...+...+.... ...|..++.++.+||.+||..||.+|++
T Consensus       266 E~~~~---~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs  342 (373)
T 3c1x_A          266 ESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS  342 (373)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            45553   356777773        7788 789998777666666666654 4556789999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|.++
T Consensus       343 ~-----~ell~~  349 (373)
T 3c1x_A          343 F-----SELVSR  349 (373)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     777643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.54  E-value=0.0015  Score=56.31  Aligned_cols=68  Identities=19%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             CCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchh
Q psy1025          16 TAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA   85 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~e   85 (258)
                      ..++..+|.        +|++ |.+||.+.+.......+.... ...|..++.++.+||.+||..||.+|+++     .+
T Consensus       207 ~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~e  281 (298)
T 3f66_A          207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSF-----SE  281 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HH
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCH-----HH
Confidence            356677773        7777 788888877777777776654 34467889999999999999999999974     66


Q ss_pred             hcc
Q psy1025          86 VRV   88 (258)
Q Consensus        86 Ik~   88 (258)
                      |.+
T Consensus       282 ll~  284 (298)
T 3f66_A          282 LVS  284 (298)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=96.54  E-value=0.0018  Score=58.59  Aligned_cols=73  Identities=14%  Similarity=0.128  Sum_probs=54.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..++..+|+        +|++ |..||...+...+...+... .+..|..++.++.+||.+||..||.+|++
T Consensus       220 E~~~~---~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs  296 (373)
T 2qol_A          220 EAIAY---RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPK  296 (373)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhhcc---CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcC
Confidence            44543   356777773        6666 99999998888888877654 24455678999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      .     .+|.+
T Consensus       297 ~-----~~i~~  302 (373)
T 2qol_A          297 F-----EQIVS  302 (373)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     67653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=96.52  E-value=0.00061  Score=61.10  Aligned_cols=96  Identities=7%  Similarity=-0.029  Sum_probs=52.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc----CC------CCC-CCCCCHHHHHHHHHHh
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR----GK------LIL-PPYLTPDARELIRKLL   68 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~----~~------~~~-P~~~S~ea~dLI~~LL   68 (258)
                      |++.+   ..|+..+|.        +|++|..||.+......+..+..    ..      ..+ +..++.++.+||..||
T Consensus       231 E~~~~---~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  307 (364)
T 3op5_A          231 DAHNG---VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVK  307 (364)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHH
T ss_pred             HHhCC---CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHh
Confidence            45553   347777773        88999999985322211111110    00      011 2467899999999999


Q ss_pred             hcccccccCCCCCCchhhc----------cCCccccCChhhhhcCCCCCCCcC
Q psy1025          69 KRQVAQRLGSGPNDGEAVR----------VHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        69 ~kdP~~RLg~~~~g~~eIk----------~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      ..||.+|++.     .+|+          ...+...+||..+....+.+|..+
T Consensus       308 ~~~p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~~~~~~~~  355 (364)
T 3op5_A          308 LLDYTEKPLY-----ENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTIT  355 (364)
T ss_dssp             TCCTTCCCCH-----HHHHHHHHHHHHHTTCCCCCCCCC--------------
T ss_pred             cCCCCCCCCH-----HHHHHHHHHHHHHcCCCcCCccceEeccCCccchhhhh
Confidence            9999999985     5553          235556778887766666555443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.50  E-value=0.002  Score=57.38  Aligned_cols=72  Identities=6%  Similarity=0.021  Sum_probs=49.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC--CHHHHHHHH---HcCCCCCCC------CCCHHHHHHHHHHh
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD--NRKKTIEKI---LRGKLILPP------YLTPDARELIRKLL   68 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~--~~~~l~~~I---l~~~~~~P~------~~S~ea~dLI~~LL   68 (258)
                      |++.+   ..++..+|.        +|++|..||...  +...+...+   ......++.      .++.++++||.+||
T Consensus       238 E~~~~---~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  314 (352)
T 2jii_A          238 DLHKG---CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVM  314 (352)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHH
T ss_pred             HHHcc---CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHH
Confidence            45553   357777773        888999999875  333333322   223332222      46899999999999


Q ss_pred             hcccccccCCCCCCchhhc
Q psy1025          69 KRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        69 ~kdP~~RLg~~~~g~~eIk   87 (258)
                      ..||.+|+++     ++|.
T Consensus       315 ~~dp~~Rps~-----~~l~  328 (352)
T 2jii_A          315 ALTYEEKPPY-----AMLR  328 (352)
T ss_dssp             TCCTTCCCCH-----HHHH
T ss_pred             hCChhhCCCH-----HHHH
Confidence            9999999975     6664

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=96.46  E-value=0.00065  Score=59.19  Aligned_cols=76  Identities=9%  Similarity=0.089  Sum_probs=48.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCH--HHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNR--KKTIEKILRGKLIL--PPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~--~~l~~~Il~~~~~~--P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+..+..++..+|.        +|++|..||.....  ..+...+. ....+  +..++.++.+||.+||..||.+|
T Consensus       213 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  291 (317)
T 2buj_A          213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQLSIPQSPRHSSALWQLLNSMMTVDPHQR  291 (317)
T ss_dssp             GGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC--CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-ccCCCCccccCCHHHHHHHHHHhhcChhhC
Confidence            56654322335667773        88899999953111  11122222 23333  35789999999999999999999


Q ss_pred             cCCCCCCchhhccC
Q psy1025          76 LGSGPNDGEAVRVH   89 (258)
Q Consensus        76 Lg~~~~g~~eIk~H   89 (258)
                      +++     .+|.+|
T Consensus       292 ps~-----~~ll~~  300 (317)
T 2buj_A          292 PHI-----PLLLSQ  300 (317)
T ss_dssp             CCH-----HHHHHH
T ss_pred             CCH-----HHHHHH
Confidence            974     788754

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=96.37  E-value=0.0011  Score=58.88  Aligned_cols=72  Identities=8%  Similarity=-0.023  Sum_probs=47.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC--CCHHHHHHHHHcCCCCCC---------CCCCHHHHHHHHHHh
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA--DNRKKTIEKILRGKLILP---------PYLTPDARELIRKLL   68 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~--~~~~~l~~~Il~~~~~~P---------~~~S~ea~dLI~~LL   68 (258)
                      |++.+   ..++..+|.        +|++|..||.+  .+..............+|         ..++.++++||.+||
T Consensus       230 E~~~~---~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  306 (345)
T 2v62_A          230 DAHKG---VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAH  306 (345)
T ss_dssp             HHHHT---CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHH
T ss_pred             HHhcC---CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHh
Confidence            45553   346777773        88899999965  333333222221111222         268899999999999


Q ss_pred             hcccccccCCCCCCchhhc
Q psy1025          69 KRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        69 ~kdP~~RLg~~~~g~~eIk   87 (258)
                      ..||.+|+++     ++|.
T Consensus       307 ~~dp~~Rps~-----~~l~  320 (345)
T 2v62_A          307 SLAYDEKPNY-----QALK  320 (345)
T ss_dssp             TCCTTCCCCH-----HHHH
T ss_pred             hcCcccCCCH-----HHHH
Confidence            9999999975     6665

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.20  E-value=0.0046  Score=53.62  Aligned_cols=73  Identities=16%  Similarity=0.164  Sum_probs=51.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC--CHHHHHHHHHcCCCC-C-CCCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD--NRKKTIEKILRGKLI-L-PPYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~--~~~~l~~~Il~~~~~-~-P~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..++..+|.        +|++|..||.+.  +...+...+....+. . +..++.++++||.+||..||.+|
T Consensus       206 E~~~~---~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  282 (310)
T 2wqm_A          206 ERIHE---NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR  282 (310)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHhCC---CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhC
Confidence            45553   356677773        888999999764  344555666554432 2 24689999999999999999999


Q ss_pred             cCCCCCCchhhcc
Q psy1025          76 LGSGPNDGEAVRV   88 (258)
Q Consensus        76 Lg~~~~g~~eIk~   88 (258)
                      ++.     .+|.+
T Consensus       283 ps~-----~~il~  290 (310)
T 2wqm_A          283 PDV-----TYVYD  290 (310)
T ss_dssp             CCH-----HHHHH
T ss_pred             CCH-----HHHHH
Confidence            975     77764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=96.14  E-value=0.0022  Score=54.61  Aligned_cols=68  Identities=16%  Similarity=0.135  Sum_probs=51.1

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      .++..+|.        +|++|..||..  ....+..+...  .++..++.++++||.+||..||.+|+++     .+|++
T Consensus       197 ~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~e~l~  267 (284)
T 2a19_B          197 DYGKEVDLYALGLILAELLHVCDTAFE--TSKFFTDLRDG--IISDIFDKKEKTLLQKLLSKKPEDRPNT-----SEILR  267 (284)
T ss_dssp             CCCTHHHHHHHHHHHHHHHSCCSSHHH--HHHHHHHHHTT--CCCTTSCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCcchhhhHHHHHHHHHHHhcCCcchh--HHHHHHHhhcc--cccccCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence            46667773        88899988864  23344444443  3567789999999999999999999974     99998


Q ss_pred             CCccc
Q psy1025          89 HPFFR   93 (258)
Q Consensus        89 HpfF~   93 (258)
                      |.+.-
T Consensus       268 ~l~~~  272 (284)
T 2a19_B          268 TLTVW  272 (284)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=95.98  E-value=0.0019  Score=56.73  Aligned_cols=60  Identities=15%  Similarity=0.134  Sum_probs=43.5

Q ss_pred             hhhcCCCCCCCCCHH---------------HHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEAVKPPFTADNRK---------------KTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~---------------~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++|..||......               .+...+.. .....|..++.++.+||.+||..||.+|+++     .+|.+
T Consensus       222 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell~  296 (327)
T 3lxl_A          222 ELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSF-----SALGP  296 (327)
T ss_dssp             HHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             HHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            888999999654322               22223332 2355677899999999999999999999985     77754


Q ss_pred             C
Q psy1025          89 H   89 (258)
Q Consensus        89 H   89 (258)
                      |
T Consensus       297 ~  297 (327)
T 3lxl_A          297 Q  297 (327)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=95.55  E-value=0.0077  Score=51.78  Aligned_cols=72  Identities=14%  Similarity=0.091  Sum_probs=49.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH----------------HHHHHHHc-CCCCCCCCCCHHHHH
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK----------------KTIEKILR-GKLILPPYLTPDARE   62 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~----------------~l~~~Il~-~~~~~P~~~S~ea~d   62 (258)
                      |++.+   ..++..+|.        +|++|..||......                .+...+.. ..+..|..++.++.+
T Consensus       187 E~~~~---~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  263 (295)
T 3ugc_A          187 ESLTE---SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYM  263 (295)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             HHhcC---CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHH
Confidence            44543   356777773        888999998643211                12222222 345567789999999


Q ss_pred             HHHHHhhcccccccCCCCCCchhhc
Q psy1025          63 LIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        63 LI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      ||.+||..||.+|+++     .+|.
T Consensus       264 li~~~l~~dp~~Rps~-----~el~  283 (295)
T 3ugc_A          264 IMTECWNNNVNQRPSF-----RDLA  283 (295)
T ss_dssp             HHHHHSCSSGGGSCCH-----HHHH
T ss_pred             HHHHHcCCChhhCCCH-----HHHH
Confidence            9999999999999975     6665

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=95.48  E-value=0.0011  Score=58.64  Aligned_cols=73  Identities=11%  Similarity=0.118  Sum_probs=46.5

Q ss_pred             cccccCCCCCCCCceehH---------hhhcCCCCCCCCCH-HHHHHHHHcC-CC--CC----CCCCCHHHHHHHHHHhh
Q psy1025           7 ASIVRNQKDTAHTKAERN---------ILEAVKPPFTADNR-KKTIEKILRG-KL--IL----PPYLTPDARELIRKLLK   69 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~---------~ml~G~pPF~~~~~-~~l~~~Il~~-~~--~~----P~~~S~ea~dLI~~LL~   69 (258)
                      -|++.|.   . +..+|.         +++.|..||.+... ..+...++.. ..  ..    +..+++++++||.+||.
T Consensus       246 PE~~~g~---~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~  321 (336)
T 2vuw_A          246 EDLFTGD---G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLN  321 (336)
T ss_dssp             SGGGCCC---S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGG
T ss_pred             hhhhcCC---C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhc
Confidence            3777763   2 566774         33458899954221 2234444422 11  11    12478999999999999


Q ss_pred             cccccccCCCCCCchhhc-cCCccc
Q psy1025          70 RQVAQRLGSGPNDGEAVR-VHPFFR   93 (258)
Q Consensus        70 kdP~~RLg~~~~g~~eIk-~HpfF~   93 (258)
                      +|     +     +++++ +||||+
T Consensus       322 ~d-----s-----a~e~l~~Hp~f~  336 (336)
T 2vuw_A          322 FS-----S-----ATDLLCQHSLFK  336 (336)
T ss_dssp             SS-----S-----HHHHHHHCGGGC
T ss_pred             cC-----C-----HHHHHhcCCCcC
Confidence            77     3     59999 999995

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=95.27  E-value=0.0059  Score=53.45  Aligned_cols=58  Identities=16%  Similarity=0.101  Sum_probs=41.8

Q ss_pred             hhhcCCCCCCCCCHH---------------HHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEAVKPPFTADNRK---------------KTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~---------------~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++|..||......               .+...+.. .....|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       229 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell  302 (318)
T 3lxp_A          229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF-----ENLI  302 (318)
T ss_dssp             HHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            889999999753221               11122222 2345677899999999999999999999975     7775

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=94.87  E-value=0.0076  Score=51.82  Aligned_cols=58  Identities=16%  Similarity=0.158  Sum_probs=40.7

Q ss_pred             hhhcCCCCCCCC--------------CH-HHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEAVKPPFTAD--------------NR-KKTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~G~pPF~~~--------------~~-~~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++|..||...              .. ..+...+.. .....|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       221 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll  294 (302)
T 4e5w_A          221 ELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSF-----QNLI  294 (302)
T ss_dssp             HHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHH
T ss_pred             HHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCH-----HHHH
Confidence            888998876421              11 222233332 2455677899999999999999999999975     6664

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=94.52  E-value=0.0019  Score=56.55  Aligned_cols=68  Identities=15%  Similarity=0.066  Sum_probs=43.1

Q ss_pred             CCCceehH--------hhhcCCCCCCCCCHHHHH-------HHHHcCCC------CC----CCCCCHHHHHHHHHHhhcc
Q psy1025          17 AHTKAERN--------ILEAVKPPFTADNRKKTI-------EKILRGKL------IL----PPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus        17 gh~~~vD~--------~ml~G~pPF~~~~~~~l~-------~~Il~~~~------~~----P~~~S~ea~dLI~~LL~kd   71 (258)
                      .++..+|.        +|++|++||.........       .......+      ..    +...+.++.+||.+||..|
T Consensus       217 ~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  296 (321)
T 2qkw_B          217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALS  296 (321)
T ss_dssp             BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSS
T ss_pred             CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCC
Confidence            45666773        889999999764332111       11111111      11    1224567899999999999


Q ss_pred             cccccCCCCCCchhhccC
Q psy1025          72 VAQRLGSGPNDGEAVRVH   89 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~H   89 (258)
                      |.+|+++     .+|.+|
T Consensus       297 P~~Rps~-----~ell~~  309 (321)
T 2qkw_B          297 SEDRPSM-----GDVLWK  309 (321)
T ss_dssp             GGGSCCH-----HHHHHH
T ss_pred             cccCcCH-----HHHHHH
Confidence            9999985     788755

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=94.43  E-value=0.0081  Score=54.54  Aligned_cols=75  Identities=21%  Similarity=0.270  Sum_probs=48.5

Q ss_pred             hhhcCCCCCCC----CCHHHHHHHHHcCCCC-------------------CC------CCCCHHHHHHHHHHhhcccccc
Q psy1025          25 ILEAVKPPFTA----DNRKKTIEKILRGKLI-------------------LP------PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus        25 ~ml~G~pPF~~----~~~~~l~~~Il~~~~~-------------------~P------~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      +|++|.+||..    ....+.+.+|+...+.                   +|      ..++..+.+||.+||..||.+|
T Consensus       215 el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R  294 (396)
T 4eut_A          215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC  294 (396)
T ss_dssp             HHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred             HHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhh
Confidence            88999999963    2334556666654321                   11      1245678899999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      +++     +++.++-       +.++.+++...|.+
T Consensus       295 ~s~-----~e~l~~l-------~~il~~~~~~~~~~  318 (396)
T 4eut_A          295 WGF-----DQFFAET-------SDILHRMVIHVFSL  318 (396)
T ss_dssp             CCH-----HHHHHHH-------HHHHTCEEEEEEET
T ss_pred             ccH-----HHHHHHH-------HHHhhceEEEEEEe
Confidence            985     6664321       44555655554443

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=94.17  E-value=0.0078  Score=53.14  Aligned_cols=66  Identities=11%  Similarity=-0.020  Sum_probs=42.6

Q ss_pred             CCceeh--------HhhhcCCCCCCCC---------------CHHHHHHHHHcCC--CCCCCC-----CCHHHHHHHHHH
Q psy1025          18 HTKAER--------NILEAVKPPFTAD---------------NRKKTIEKILRGK--LILPPY-----LTPDARELIRKL   67 (258)
Q Consensus        18 h~~~vD--------~~ml~G~pPF~~~---------------~~~~l~~~Il~~~--~~~P~~-----~S~ea~dLI~~L   67 (258)
                      |+..+|        |+|++|.+||...               ....+...+....  +.+|..     ......+|+.+|
T Consensus       195 ~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~c  274 (303)
T 3hmm_A          195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC  274 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTT
T ss_pred             cChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHH
Confidence            556677        4999998766321               2334444454433  344432     224678899999


Q ss_pred             hhcccccccCCCCCCchhhcc
Q psy1025          68 LKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        68 L~kdP~~RLg~~~~g~~eIk~   88 (258)
                      |..||.+|+++     .+|.+
T Consensus       275 l~~dP~~RPt~-----~ei~~  290 (303)
T 3hmm_A          275 WYANGAARLTA-----LRIKK  290 (303)
T ss_dssp             CCSSGGGSCCH-----HHHHH
T ss_pred             cccCHhHCcCH-----HHHHH
Confidence            99999999985     77764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=94.16  E-value=0.0027  Score=54.93  Aligned_cols=59  Identities=10%  Similarity=0.021  Sum_probs=38.5

Q ss_pred             hhhcCCCCCCCCCHHH----HHHHHHcCCC-----------CCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhcc
Q psy1025          25 ILEAVKPPFTADNRKK----TIEKILRGKL-----------ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV   88 (258)
Q Consensus        25 ~ml~G~pPF~~~~~~~----l~~~Il~~~~-----------~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~   88 (258)
                      +|++|.+||...+...    +...+.....           ..+...+..+.+||.+||..||.+|+++     .+|.+
T Consensus       226 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~~l~~  299 (307)
T 2nru_A          226 EIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI-----KKVQQ  299 (307)
T ss_dssp             HHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCH-----HHHHH
T ss_pred             HHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence            8889999997644322    2222222111           1122345778999999999999999974     77764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=94.02  E-value=0.0029  Score=55.00  Aligned_cols=66  Identities=8%  Similarity=0.083  Sum_probs=44.5

Q ss_pred             CCCceeh--------HhhhcCCCCCCCCCHHHHHH---HHHcCCCC----CCCCCCHHHHHHHHHHhhcccccccCCCCC
Q psy1025          17 AHTKAER--------NILEAVKPPFTADNRKKTIE---KILRGKLI----LPPYLTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus        17 gh~~~vD--------~~ml~G~pPF~~~~~~~l~~---~Il~~~~~----~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      .++..+|        |+|++|++||.+.+....+.   .+......    ++..++.++++||.+||.+||.+| ++   
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~---  253 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SA---  253 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CH---
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CH---
Confidence            3555666        38899999998765432111   11122222    234689999999999999999999 64   


Q ss_pred             Cchhhcc
Q psy1025          82 DGEAVRV   88 (258)
Q Consensus        82 g~~eIk~   88 (258)
                        .++.+
T Consensus       254 --~el~~  258 (286)
T 3uqc_A          254 --STLLN  258 (286)
T ss_dssp             --HHHHH
T ss_pred             --HHHHH
Confidence              77764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=93.68  E-value=0.02  Score=50.13  Aligned_cols=58  Identities=16%  Similarity=0.103  Sum_probs=40.7

Q ss_pred             hhhcCCCCCCCCCH------------H----HHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          25 ILEAVKPPFTADNR------------K----KTIEKILR-GKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        25 ~ml~G~pPF~~~~~------------~----~l~~~Il~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +|++|..||.....            .    .+...+.. ..+..|..++.++.+||.+||..||.+|+++     .+|.
T Consensus       240 el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~el~  314 (326)
T 2w1i_A          240 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF-----RDLA  314 (326)
T ss_dssp             HHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             HHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            88899999864211            0    11222222 2355677899999999999999999999975     6665

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=93.59  E-value=0.064  Score=46.85  Aligned_cols=58  Identities=17%  Similarity=0.134  Sum_probs=37.7

Q ss_pred             hhhcCCCCCCCC----------------CHHHHHHHHHcCCC--CCCCC-----CCHHHHHHHHHHhhcccccccCCCCC
Q psy1025          25 ILEAVKPPFTAD----------------NRKKTIEKILRGKL--ILPPY-----LTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus        25 ~ml~G~pPF~~~----------------~~~~l~~~Il~~~~--~~P~~-----~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      +|++|.+||.+.                ....+...+.....  .++..     .+.++.+||.+||..||.+|+++   
T Consensus       230 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~---  306 (322)
T 3soc_A          230 ELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA---  306 (322)
T ss_dssp             HHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCH---
T ss_pred             HHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCH---
Confidence            899999999753                22333333333222  12221     23459999999999999999985   


Q ss_pred             Cchhhc
Q psy1025          82 DGEAVR   87 (258)
Q Consensus        82 g~~eIk   87 (258)
                        .+|.
T Consensus       307 --~ell  310 (322)
T 3soc_A          307 --GCVG  310 (322)
T ss_dssp             --HHHH
T ss_pred             --HHHH
Confidence              6665

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=93.54  E-value=0.038  Score=47.24  Aligned_cols=58  Identities=16%  Similarity=0.218  Sum_probs=38.0

Q ss_pred             hhhcC----------CCCCCCCC----HHHHHHHHHcC---CCCCCC-----CCCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          25 ILEAV----------KPPFTADN----RKKTIEKILRG---KLILPP-----YLTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        25 ~ml~G----------~pPF~~~~----~~~l~~~Il~~---~~~~P~-----~~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      +|++|          .+||....    .......+...   ...+|.     ..+.++.+||.+||..||.+|+++    
T Consensus       215 el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----  290 (301)
T 3q4u_A          215 EVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA----  290 (301)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCH----
T ss_pred             HHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCH----
Confidence            88899          89996421    22233333322   222332     245789999999999999999985    


Q ss_pred             chhhc
Q psy1025          83 GEAVR   87 (258)
Q Consensus        83 ~~eIk   87 (258)
                       .+|.
T Consensus       291 -~~i~  294 (301)
T 3q4u_A          291 -LRIK  294 (301)
T ss_dssp             -HHHH
T ss_pred             -HHHH
Confidence             6665

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=93.12  E-value=0.086  Score=45.48  Aligned_cols=71  Identities=7%  Similarity=0.007  Sum_probs=47.4

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKK-----TIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~-----l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      |++.+   ..++..+|.        +|++|..||.......     .......  ...|..++.++.+||.+||..||.+
T Consensus       192 E~~~~---~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~  266 (310)
T 3s95_A          192 EMING---RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD--RYCPPNCPPSFFPITVRCCDLDPEK  266 (310)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH--HTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred             HHhcC---CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc--ccCCCCCCHHHHHHHHHHccCChhh
Confidence            55553   456777773        8889999986432110     0111111  1346778899999999999999999


Q ss_pred             ccCCCCCCchhhcc
Q psy1025          75 RLGSGPNDGEAVRV   88 (258)
Q Consensus        75 RLg~~~~g~~eIk~   88 (258)
                      |+++     .+|.+
T Consensus       267 Rps~-----~~l~~  275 (310)
T 3s95_A          267 RPSF-----VKLEH  275 (310)
T ss_dssp             SCCH-----HHHHH
T ss_pred             CcCH-----HHHHH
Confidence            9975     77764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=92.80  E-value=0.012  Score=51.39  Aligned_cols=30  Identities=7%  Similarity=-0.162  Sum_probs=25.3

Q ss_pred             CHHHHHHHHHHhhcccccccCCCCCCchhhccCCc
Q psy1025          57 TPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPF   91 (258)
Q Consensus        57 S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~Hpf   91 (258)
                      +.++.+||.+||..||.+|+++     .+|.+|-.
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~-----~ell~~L~  307 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKM-----SEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCH-----HHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCccCCCH-----HHHHHHhc
Confidence            4678999999999999999985     88886643

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=92.10  E-value=0.041  Score=47.83  Aligned_cols=29  Identities=17%  Similarity=0.153  Sum_probs=24.5

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH   89 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~H   89 (258)
                      ++.++.+||.+||..||.+|+++     .+|.+|
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps~-----~ell~~  325 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLTA-----LRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCH-----HHHHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCCH-----HHHHHH
Confidence            45679999999999999999985     777754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=91.13  E-value=0.15  Score=44.25  Aligned_cols=60  Identities=12%  Similarity=0.093  Sum_probs=40.9

Q ss_pred             hhhcC----------CCCCCCC-----CHHHHHHHHHcCC--CCCCCC-----CCHHHHHHHHHHhhcccccccCCCCCC
Q psy1025          25 ILEAV----------KPPFTAD-----NRKKTIEKILRGK--LILPPY-----LTPDARELIRKLLKRQVAQRLGSGPND   82 (258)
Q Consensus        25 ~ml~G----------~pPF~~~-----~~~~l~~~Il~~~--~~~P~~-----~S~ea~dLI~~LL~kdP~~RLg~~~~g   82 (258)
                      +|++|          ..||...     ....+...+....  ..+|..     .+....+||.+||..||.+|+++    
T Consensus       249 el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----  324 (342)
T 1b6c_B          249 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA----  324 (342)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCH----
T ss_pred             HHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCH----
Confidence            88898          7899754     3344555554432  233321     23578899999999999999985    


Q ss_pred             chhhccC
Q psy1025          83 GEAVRVH   89 (258)
Q Consensus        83 ~~eIk~H   89 (258)
                       .+|.+|
T Consensus       325 -~~i~~~  330 (342)
T 1b6c_B          325 -LRIKKT  330 (342)
T ss_dssp             -HHHHHH
T ss_pred             -HHHHHH
Confidence             787755

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=89.00  E-value=0.23  Score=43.13  Aligned_cols=26  Identities=15%  Similarity=0.248  Sum_probs=22.4

Q ss_pred             CHHHHHHHHHHhhcccccccCCCCCCchhhc
Q psy1025          57 TPDARELIRKLLKRQVAQRLGSGPNDGEAVR   87 (258)
Q Consensus        57 S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk   87 (258)
                      +.++.+||.+||..||.+|+++     .+|.
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~-----~e~l  310 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTA-----QXAE  310 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             HHHHHHHHHHHhcCChhhCcch-----HHHH
Confidence            3479999999999999999985     7774

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=87.36  E-value=0.16  Score=49.41  Aligned_cols=60  Identities=17%  Similarity=0.076  Sum_probs=43.2

Q ss_pred             CCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC-----CCCHHHHHHHHHHhhcccccccCCCCCCch
Q psy1025          18 HTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP-----YLTPDARELIRKLLKRQVAQRLGSGPNDGE   84 (258)
Q Consensus        18 h~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~-----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~   84 (258)
                      ++..+|+        +|++|.+||.+....           ..|.     .++..+.+||.+||.+||.+|++.     .
T Consensus       253 ~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~-----~  316 (681)
T 2pzi_A          253 PTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTT-----A  316 (681)
T ss_dssp             SCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSS-----H
T ss_pred             CCCceehhhhHHHHHHHHhCCCCCcccccc-----------cccccccccccCHHHHHHHhhhccCChhhCCCH-----H
Confidence            4566673        788999998752110           1111     246789999999999999999986     7


Q ss_pred             hhccCCccc
Q psy1025          85 AVRVHPFFR   93 (258)
Q Consensus        85 eIk~HpfF~   93 (258)
                      +...|+|+.
T Consensus       317 ~~l~~~l~~  325 (681)
T 2pzi_A          317 EEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777888875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=84.98  E-value=0.13  Score=45.67  Aligned_cols=63  Identities=8%  Similarity=-0.058  Sum_probs=42.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP-YLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..|+..+|+        +|++|++||.......     ......++. ..+..+.+++..||..+|.+|+..
T Consensus       255 E~~~~---~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~  326 (365)
T 3e7e_A          255 EMLSN---KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPS  326 (365)
T ss_dssp             HHHTT---CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred             HHhcC---CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----eeechhccccCcHHHHHHHHHHHcCCCCCCcchH
Confidence            66665   347888883        8999999996532210     001111222 346789999999999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-38
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-33
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-29
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-27
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.001
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.002
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.002
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.002
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.002
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	0.004
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.004

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 3e-38
 Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++  E IL  ++  P  L+P+A+ L+  LLK+   QRLG GP+D + V  H
Sbjct: 202 RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES--------LLS 141
            FF SINW DV+ +KL PPFKP +T E D   FD +FT Q+   +P +         L  
Sbjct: 262 RFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQ 321

Query: 142 ESANLVFQGFTYVA 155
                +F+ F Y+A
Sbjct: 322 REEQEMFEDFDYIA 335

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 1e-33
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           + PF   + ++    I       P +L  +A++L+ KL  R+  +RLG        +R H
Sbjct: 200 QSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVR----GDIRQH 255

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSP-DESLLSESANLVF 148
           P FR INW ++  ++++PPF+P +    D S FD +F  + P  S  D +L++     +F
Sbjct: 256 PLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMF 315

Query: 149 QGFTY 153
           + F++
Sbjct: 316 RNFSF 320

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  110 bits (277), Expect = 2e-29
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
             PF   N  KT EKIL  +L  PP+   D ++L+ +L+ R ++QRLG+  N  E V+ H
Sbjct: 198 YTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLT-GEDDVSQFDTKFTRQTPVDSPDESLLSESANLVF 148
           P+F+ + W  +LSR +E P++P +  G+ D SQFD             E    +    +F
Sbjct: 258 PWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGE----DPYADLF 313

Query: 149 QGF 151
           + F
Sbjct: 314 RDF 316

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
            PPF AD   +  EKI+ GK+  P + + D ++L+R LL+  + +R G+  N    ++ H
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294

Query: 90  PFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESANLVFQ 149
            +F + +W  +  RK+E PF P   G  D S FD  +  +    S +E    E     F 
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEEIRVSINEKCGKE-----FT 348

Query: 150 GF 151
            F
Sbjct: 349 EF 350

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  105 bits (263), Expect = 3e-27
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 16/146 (10%)

Query: 30  KPPFTADNRKKTIE---KILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
             PF     K   E     L   + LP   +P+ R L+  LL+R V +RLG      + V
Sbjct: 203 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 262

Query: 87  RVHPFFRSINWSDVLSRKLEPPFKPSL-----TGEDDVSQFDTKFTRQTPVDSPDESLLS 141
           +  PFFRS++W  V  +K  PP  P           D+  FD + T+   +   D+ L  
Sbjct: 263 KESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL-- 320

Query: 142 ESANLVFQGFTYVAPSVLEEMHHDKP 167
                 ++ F        ++   +  
Sbjct: 321 ------YRNFPLTISERWQQEVAETV 340

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 2e-23
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 30  KPPFTADNRKKTIEKILRGKL----ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PFT D  K +  +I R  L      P  ++  A++LI++LL +   +RLG GP D + 
Sbjct: 229 ASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE 288

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDV 119
           ++ H FF+ INW D+ ++K+  PFKP +  E DV
Sbjct: 289 IKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDV 322

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 9e-17
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG-PNDGEAVRV 88
            PPF A N     +KI++ +   P    P AR+L+ KLL     +RLG         ++ 
Sbjct: 207 LPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

Query: 89  HPFFRSINWSDVLSRKLEPPFKPS 112
           HPFF S+ W ++  +   PP   +
Sbjct: 267 HPFFESVTWENLHQQT--PPKLTA 288

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 6e-12
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 10/86 (11%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PF  D +++T+  +               +  A++ IR+LL +   +R+       + 
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI-----QD 267

Query: 86  VRVHPFFRSINWSDVLSRKLEPP-FK 110
              HP+ +  +    LS     P F+
Sbjct: 268 SLQHPWIKPKDTQQALSSAWSHPQFE 293

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.4 bits (138), Expect = 3e-10
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 12/107 (11%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
            PPF  +N  K  E+IL+ +          ++  A++ IR L+++   +R        E 
Sbjct: 206 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC-----EQ 260

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPV 132
              HP+         L + +       +      S++   F     V
Sbjct: 261 ALQHPWIA---GDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVV 304

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 5e-10
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
           KPPF A+  ++T ++I R +   P ++T  AR+LI +LLK   +QR          V  H
Sbjct: 201 KPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML-----REVLEH 255

Query: 90  PFFRS 94
           P+  +
Sbjct: 256 PWITA 260

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 11/113 (9%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PF  +N  +T+  +      +       ++ D ++ IRKLL      R+         
Sbjct: 222 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI-----HQ 276

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDES 138
              HP+    N     S+     +      +   +++D       P+      
Sbjct: 277 ALEHPWLTPGNAPGRDSQIPSSRYTKIR--DSIKTKYDAWPEPLPPLGRISNY 327

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.1 bits (127), Expect = 8e-09
 Identities = 20/121 (16%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PF  ++  +T++ + R            ++P+A++ I+ LL+++  +RL         
Sbjct: 225 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTV-----HD 279

Query: 86  VRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSESAN 145
              HP+ +  + S++ SR     +       + + Q   +     P   P    ++  ++
Sbjct: 280 ALEHPWLKG-DHSNLTSRIPSSRY-------NKIRQKIKEKYADWPAPQPAIGRIANFSS 331

Query: 146 L 146
           L
Sbjct: 332 L 332

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 1e-07
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
             PF A+  ++ IE I+  +          ++ +A + + +LL ++   R+ +       
Sbjct: 200 INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA-----SE 254

Query: 86  VRVHPFFR 93
              HP+ +
Sbjct: 255 ALQHPWLK 262

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 9/68 (13%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEA 85
            PPF    +   +  I+ G            +   ++L+ + L  Q  +R  +     E 
Sbjct: 212 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----EE 266

Query: 86  VRVHPFFR 93
              HPFF+
Sbjct: 267 ALAHPFFQ 274

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 11/66 (16%)

Query: 30  KPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVH 89
             PF  D       +I+RG++     ++ + + LIR  L  + + R        E ++ H
Sbjct: 207 DIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTF-----EEIQNH 255

Query: 90  PFFRSI 95
           P+ + +
Sbjct: 256 PWMQDV 261

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 30  KPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           +PP    N  + + KI + +   L  P   + + ++ ++K L++ V  R  +       +
Sbjct: 212 EPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTT-----SQL 266

Query: 87  RVHPFFR 93
             HPF  
Sbjct: 267 LQHPFVT 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 8/67 (11%)

Query: 30  KPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           +PP+  +N  + +  I      +L  P  L+   R+ + + L   V +R  +     + +
Sbjct: 213 EPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSA-----KEL 267

Query: 87  RVHPFFR 93
             H F +
Sbjct: 268 LQHQFLK 274

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 26  LEAVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGE 84
           L A+ PPFTA ++K+   KI  GK   +P   + +  E+I ++L  +   R    P+  E
Sbjct: 207 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHR----PSVEE 262

Query: 85  AVRVHPF 91
            +  +P 
Sbjct: 263 ILE-NPL 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 8/76 (10%), Positives = 22/76 (28%), Gaps = 7/76 (9%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
                + P+      +    + +G+ +  P     +  +L+       V  R    P   
Sbjct: 203 AFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR----PGFA 258

Query: 84  EAVRV--HPFFRSINW 97
                  + ++  +N 
Sbjct: 259 AVELRLRNYYYDVVNE 274

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 30  KPPFTADNRKKTIEKILRGKL--ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVR 87
           KPP    N    +  I + +   +   + +   R  +   L++    R    P     ++
Sbjct: 211 KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR----PTSEVLLK 266

Query: 88  VHPFFRSINWSDVLSRKLEPPFK 110
            H F        V+   ++    
Sbjct: 267 -HRFVLRERPPTVIMDLIQRTKD 288

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 16/85 (18%)

Query: 30  KPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV 88
           + P+     ++ ++++ RG ++  PP       +L+ +  +++  +R    P        
Sbjct: 212 RVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER----PTFEYLQAF 267

Query: 89  -HPFFRSINWSDVLSRKLEPPFKPS 112
              +F S           EP ++P 
Sbjct: 268 LEDYFTS----------TEPQYQPG 282

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           I    + P+   + ++ +  ++ G L+  P        EL+R   +     R    P+  
Sbjct: 228 IATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMR----PSFL 283

Query: 84  EAVR-----VHPFFRSIN 96
           E +      + P FR ++
Sbjct: 284 EIISSIKEEMEPGFREVS 301

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (98), Expect = 3e-05
 Identities = 9/85 (10%), Positives = 28/85 (32%), Gaps = 9/85 (10%)

Query: 38  RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW 97
           +   +E +L  K         +  + +  +L+    +R  +       +  HP+ +    
Sbjct: 282 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA-----GGLVNHPWLKDTLG 336

Query: 98  SDVLSRKLEPPFKPSLTGEDDVSQF 122
            +    ++  P +       D+  +
Sbjct: 337 ME----EIRVPDRELYGSGSDIPGW 357

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 4/53 (7%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQRLGS 78
           +PPFT D+      + +R   I P      L+ D   ++ K L +    R  +
Sbjct: 211 EPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 263

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 7/71 (9%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
            L   + P+      + +  I +GK +  PP   P+   L+      +   R    P+  
Sbjct: 205 ALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDR----PDFL 260

Query: 84  EAVRV--HPFF 92
              +     ++
Sbjct: 261 TVEQRMRACYY 271

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 7/71 (9%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRLGSGPND 82
           +  +  P     N  +   ++  G           P+ +E+I   +++   +R       
Sbjct: 205 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSI---- 260

Query: 83  GEAVRVHPFFR 93
            + +  H FF+
Sbjct: 261 -KDLLNHAFFQ 270

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 19/107 (17%)

Query: 25  ILEAVKPPFTADNRKKTIE----KILRGKLILP----PYLTPDARELIRKLLKRQVAQRL 76
           IL    PPF +++          +I  G+   P      ++ + + LIR LLK +  QR+
Sbjct: 205 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 264

Query: 77  GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFD 123
                       HP+          ++  + P   S   ++D  +++
Sbjct: 265 TI-----TEFMNHPWIMQ------STKVPQTPLHTSRVLKEDKERWE 300

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 19/124 (15%), Positives = 38/124 (30%), Gaps = 13/124 (10%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           ++     P+      +    + +G+ L  PP  T D   ++ K        R    P   
Sbjct: 206 LMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR----PKFR 261

Query: 84  EAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLLSES 143
           E +             ++ +  E    PS T        D+ F R    +   + ++   
Sbjct: 262 ELIIEFSKMARDPQRYLVIQGDERMHLPSPT--------DSNFYRALMDEEDMDDVVDAD 313

Query: 144 ANLV 147
             L+
Sbjct: 314 EYLI 317

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 52  LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW 97
               ++P+A + + KLL+     RL +          HP+F ++  
Sbjct: 287 NQHLVSPEALDFLDKLLRYDHQSRLTA-----REAMEHPYFYTVVK 327

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDG 83
           I      P+   +  +  E + +  ++  P        EL+R   +   + R    P+  
Sbjct: 209 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR----PSFA 264

Query: 84  EAVRV-HPFFRSINWSDVLSRKL 105
           E  +     F+  + SD + ++L
Sbjct: 265 EIHQAFETMFQESSISDEVEKEL 287

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 51  ILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV 100
           +     + + ++ + K L +  A+R        + + VH F +  +  +V
Sbjct: 265 LPSGVFSLEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRSDAEEV 309

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 3e-04
 Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR 75
           I+     P+      +  EK+ +G +L  P     +  +L+R+  + +  +R
Sbjct: 219 IVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 270

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 30  KPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRV 88
           + P+      + I+ + RG +++ P     +  +L+R   K +   R    P       V
Sbjct: 208 RIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR----PTFDYLRSV 263

Query: 89  -HPFFRS 94
              FF +
Sbjct: 264 LEDFFTA 270

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGKLI-LPPYLTPDARELIRKLLKRQVAQR 75
           I      P+     ++ I  +  G ++  P     +   L+R    +  A R
Sbjct: 235 IFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 286

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR 75
           I    + P+     K  + ++ +G K+  P    P   E+++       A R
Sbjct: 193 IYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 244

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 4e-04
 Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGKLIL--PPYLTPDARELIRKLLKRQVAQR 75
           I      P+          K+++    +  P Y T +   +++        +R
Sbjct: 259 IFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKR 311

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 30  KPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR 75
             PF        I +I  G +L +PP   P    L+ K      ++R
Sbjct: 207 VKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 7e-04
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR 75
           I    K P+      +T E I +G +L  P   +     ++      +  +R
Sbjct: 194 IYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 245

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQR 75
           ++    PP+   N       +L+G+ L+ P Y      E++ K    +   R
Sbjct: 227 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMR 278

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 20/131 (15%), Positives = 35/131 (26%), Gaps = 42/131 (32%)

Query: 30  KPPFTADNRKKTIEKILRG-----------------------------KLILPPYLTPDA 60
           +P F  D+    + +I++                                +  P   P+A
Sbjct: 220 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEA 279

Query: 61  RELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVS 120
             L  +LL+     RL            H FF  +   +V          P+      + 
Sbjct: 280 IALCSRLLEYTPTARLTP-----LEACAHSFFDELRDPNV--------KLPNGRDTPALF 326

Query: 121 QFDTKFTRQTP 131
            F T+     P
Sbjct: 327 NFTTQELSSNP 337

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 14/95 (14%), Positives = 28/95 (29%), Gaps = 32/95 (33%)

Query: 30  KPPFTADNRKKTIEKILRGKLI---------------------------LPPYLTPDARE 62
           KP F   +    + KIL    +                               +    ++
Sbjct: 212 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD 271

Query: 63  LIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW 97
           L+ K L    A+R+ +      +   HP+F+ +  
Sbjct: 272 LLLKCLTFNPAKRISA-----YSALSHPYFQDLER 301

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 25  ILEAVKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQR 75
           I      P+     ++  + +  G ++  P   T +   ++R       +QR
Sbjct: 230 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQR 281

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 34/96 (35%)

Query: 30  KPPFTADNRKKTIEKILRGKLI-----------------------------LPPYLTPDA 60
           +  F  D+    + +I R                                 + P L  D 
Sbjct: 200 RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259

Query: 61  RELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN 96
           R L+ ++L     +R+ +     +A   HPFF+ + 
Sbjct: 260 RSLLSQMLHYDPNKRISA-----KAALAHPFFQDVT 290

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 41/123 (33%)

Query: 30  KPPFTADNRKKTIEKILRGKLILP-------------------------------PYLTP 58
           K  F   +    +++I++     P                                  +P
Sbjct: 216 KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP 275

Query: 59  DARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDD 118
            A  L+ K+L     QR+ +          HP+F S++ +     + EP  +      DD
Sbjct: 276 LAVNLLEKMLVLDAEQRVTA-----GEALAHPYFESLHDT-----EDEPQVQKYDDSFDD 325

Query: 119 VSQ 121
           V +
Sbjct: 326 VDR 328

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 8/67 (11%)

Query: 30  KPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAV 86
           + P+   +         + K   L     +      L+ K+L    + R+         +
Sbjct: 203 ELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITI-----PDI 257

Query: 87  RVHPFFR 93
           +   ++ 
Sbjct: 258 KKDRWYN 264

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 7/95 (7%)

Query: 23  RNILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSGPND 82
           RN +E           K   + +              AR+L+ K+L    A+R+      
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV---- 305

Query: 83  GEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGED 117
            +    HP+     W D    +  PP       ++
Sbjct: 306 -DDALQHPYIN--VWYDPAEVEAPPPQIYDKQLDE 337

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.86
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.79
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.79
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.72
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.61
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.6
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.3
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.22
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.07
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.07
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.07
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.98
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.9
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.9
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.83
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.82
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.8
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.79
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.77
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.77
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.77
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.75
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.75
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.74
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.74
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.72
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.7
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.67
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.67
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.58
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.54
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.28
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.2
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.16
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.08
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.04
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.03
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.96
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	97.93
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.9
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	97.89
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.89
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	97.88
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.78
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.77
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.76
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.74
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	97.73
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.69
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.67
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.62
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.46
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.42
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.28
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	97.13
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	95.62
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	80.86

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.1e-24  Score=192.70  Aligned_cols=147  Identities=35%  Similarity=0.610  Sum_probs=123.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -||+.+   .+|+.++||        +|++|++||.+.+...++..|....+.+|..+|+++++||++||++||.+|+++
T Consensus       174 PE~~~~---~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~  250 (337)
T d1o6la_         174 PEVLED---NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG  250 (337)
T ss_dssp             GGGGSS---SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             hhhccC---CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHhhccCCchhhccc
Confidence            378885   578999995        899999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCccc--------cccccCCCccC
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESL--------LSESANLVFQG  150 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~--------~~~~~~~~F~g  150 (258)
                      ...++++|++||||.+++|+.+..+++.|||+|.+....|+++|+.+++.+....++.+..        .....+..|.+
T Consensus       251 ~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~  330 (337)
T d1o6la_         251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQEMFED  330 (337)
T ss_dssp             STTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTSCCC--------------------CCTTTT
T ss_pred             ccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCChhhhhhcCchhhhccCCCCCCccccccccccccchhhhhccCC
Confidence            6567899999999999999999999999999999999999999999998877665554321        11234568999


Q ss_pred             eeeeCc
Q psy1025         151 FTYVAP  156 (258)
Q Consensus       151 Fsy~~~  156 (258)
                      |+|++.
T Consensus       331 f~~v~d  336 (337)
T d1o6la_         331 FDYIAD  336 (337)
T ss_dssp             CCEECC
T ss_pred             CEeeCC
Confidence            999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.3e-22  Score=181.90  Aligned_cols=140  Identities=26%  Similarity=0.526  Sum_probs=94.0

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      -||+++   ..|+.++|+        +|++|++||.+.+...++.+|....+.+|..+|+++++||++||.+||.+|+++
T Consensus       172 PE~~~~---~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~  248 (320)
T d1xjda_         172 PEILLG---QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV  248 (320)
T ss_dssp             HHHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             HHHHcC---CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHhcccCCCCCcCH
Confidence            377875   568888883        999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChhcccCCCCCCCCcccc-ccccCCCccCeee
Q psy1025          79 GPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTKFTRQTPVDSPDESLL-SESANLVFQGFTY  153 (258)
Q Consensus        79 ~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~f~~~~~~~s~~~~~~-~~~~~~~F~gFsy  153 (258)
                          ..+|++||||++++|+.+..+++.||++|.+.+..|+++||.++..+.+..++.+... .+..+..|.||+|
T Consensus       249 ----~~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~  320 (320)
T d1xjda_         249 ----RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFSF  320 (320)
T ss_dssp             ----BSCGGGSGGGTTCCHHHHHTTCSCC--------------------------------------CCTTTTCCC
T ss_pred             ----HHHHHhCchhccCCHHHHHhcCCCCCCCCCCCCccchhhcChHhhhCCccCCCCcccccCchhhcccCcCcC
Confidence                2489999999999999999999999999999999999999998887777666655433 3345678999998

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=1.4e-19  Score=163.80  Aligned_cols=115  Identities=32%  Similarity=0.583  Sum_probs=105.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.+   .+|+.++|+        +|++|.+||.+.+...++.+|....+.+|..+++++++||++||.+||.+|++..
T Consensus       208 E~~~~---~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~  284 (350)
T d1rdqe_         208 EIILS---KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             HHHcC---CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHhhhCHHhccccc
Confidence            77875   568888884        8999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCCCCChh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVSQFDTK  125 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s~Fd~~  125 (258)
                      ...+++|++||||+++||+.+..++++|||+|.+.+..|+++||..
T Consensus       285 r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~d~s~~~~~  330 (350)
T d1rdqe_         285 KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDY  330 (350)
T ss_dssp             TTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCC
T ss_pred             cccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCcchhhhcCCC
Confidence            5568999999999999999999999999999999999999999853

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=9.8e-20  Score=162.65  Aligned_cols=114  Identities=37%  Similarity=0.694  Sum_probs=94.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+.++|+        +|++|++||.+.+..+++.+|+...+.+|..+++++++||.+||.+||.+|++..
T Consensus       171 E~l~~---~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~  247 (316)
T d1fota_         171 EVVST---KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNL  247 (316)
T ss_dssp             HHHTT---CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred             HHHcC---CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccc
Confidence            77775   468888884        8999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCchhhccCCccccCChhhhhcCCCCCCCcCcCC-CCCCCCCCCh
Q psy1025          80 PNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLT-GEDDVSQFDT  124 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~-~~~D~s~Fd~  124 (258)
                      ...+++|++||||++++|+.|..++++|||+|.+. ...|+++||.
T Consensus       248 r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~~~~d~~~f~~  293 (316)
T d1fota_         248 QNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK  293 (316)
T ss_dssp             TTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC------------
T ss_pred             hhhHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCCCcchhhhcCC
Confidence            56789999999999999999999999999999864 4578999985

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.72  E-value=4.5e-18  Score=154.56  Aligned_cols=141  Identities=25%  Similarity=0.449  Sum_probs=101.3

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCC---HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADN---RKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~---~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+  ..+|+.++|+        +|++|++||.+.+   ...+...+....+.+|..+|+++++||.+||.+||.+|+
T Consensus       175 E~~~~--~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  252 (364)
T d1omwa3         175 EVLQK--GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL  252 (364)
T ss_dssp             HHHST--TCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTST
T ss_pred             HHhhc--CCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhC
Confidence            67764  3578999994        8999999998654   344555566677888889999999999999999999999


Q ss_pred             CCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCC-----CCCCCChhcccCCCCCCCCccccccccCCCccCe
Q psy1025          77 GSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGED-----DVSQFDTKFTRQTPVDSPDESLLSESANLVFQGF  151 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~-----D~s~Fd~~f~~~~~~~s~~~~~~~~~~~~~F~gF  151 (258)
                      ++...++++|++||||+++||+.+..++++|||+|......     |+.+|+++++.....        ....+..|.+|
T Consensus       253 t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~  324 (364)
T d1omwa3         253 GCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKL--------LDSDQELYRNF  324 (364)
T ss_dssp             TTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------------CCC--------CSSSSGGGTTC
T ss_pred             CCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCCCCcCCccccccCChhhccCCCC--------CChHHHHHhcC
Confidence            97666789999999999999999999999999999765443     444555544332211        12234568899


Q ss_pred             eeeCchH
Q psy1025         152 TYVAPSV  158 (258)
Q Consensus       152 sy~~~~~  158 (258)
                      ++..+..
T Consensus       325 ~~~~~~~  331 (364)
T d1omwa3         325 PLTISER  331 (364)
T ss_dssp             CEECHHH
T ss_pred             CccCchH
Confidence            9887643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.2e-16  Score=137.86  Aligned_cols=112  Identities=38%  Similarity=0.663  Sum_probs=89.5

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK----KTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~----~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      .|++++. ...++..+|.        +|++|.+||.+.+..    .+........+.+|..+|.++++||.+||..||.+
T Consensus       199 pe~~~~~-~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~  277 (322)
T d1vzoa_         199 PDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKK  277 (322)
T ss_dssp             HHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hHHhhcC-CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHH
Confidence            4566543 2356777773        999999999875443    44444556778888899999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCC
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDV  119 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~  119 (258)
                      |+++....++||++||||++++|+.+..++++|||+|.+.++.|+
T Consensus       278 R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~~~~  322 (322)
T d1vzoa_         278 RLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDV  322 (322)
T ss_dssp             STTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CCC
T ss_pred             cCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCCCCC
Confidence            998755568999999999999999999999999999999887663

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.8e-16  Score=137.41  Aligned_cols=99  Identities=29%  Similarity=0.515  Sum_probs=83.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      ||+.+   ..|+.++|+        +|++|.+||.+.+...++.+|++..+.+|..+++++++||.+||.+||.+|+++.
T Consensus       180 E~~~~---~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~  256 (288)
T d1uu3a_         180 ELLTE---KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCE  256 (288)
T ss_dssp             HHHHT---CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSG
T ss_pred             eeecc---CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHH
Confidence            77775   578889994        8999999999999999999999999999999999999999999999999999861


Q ss_pred             C-CCchhhccCCccccCChhhhhcCCCCCCCcC
Q psy1025          80 P-NDGEAVRVHPFFRSINWSDVLSRKLEPPFKP  111 (258)
Q Consensus        80 ~-~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P  111 (258)
                      . .....|++||||++|||+.|..  ..||-+|
T Consensus       257 e~~~~~~i~~Hpff~~i~w~~l~~--~~pP~l~  287 (288)
T d1uu3a_         257 EMEGYGPLKAHPFFESVTWENLHQ--QTPPKLT  287 (288)
T ss_dssp             GGTCHHHHHTSGGGTTCCCTTGGG--SCCCCCC
T ss_pred             HHcCCHHHHcCCccCCCCHHHhhc--CCCCCCC
Confidence            1 1223479999999999999854  3465554

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.5e-13  Score=116.51  Aligned_cols=93  Identities=20%  Similarity=0.314  Sum_probs=70.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+..+++.+|....+.++    ..+|.++++||++||..||.+|
T Consensus       186 E~~~~---~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  262 (293)
T d1jksa_         186 EIVNY---EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR  262 (293)
T ss_dssp             HHHTT---CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HHHcC---CCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHC
Confidence            67764   467888883        89999999999999999999999887766    4789999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhhhhcCCCCCC
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPP  108 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pP  108 (258)
                      +++     ++|++||||++++|+..+.....+|
T Consensus       263 ~s~-----~eil~hp~~~~~~~~~~l~~~~~~P  290 (293)
T d1jksa_         263 MTI-----QDSLQHPWIKPKDTQQALSSAWSHP  290 (293)
T ss_dssp             CCH-----HHHHHSTTTCC-------------C
T ss_pred             cCH-----HHHhcCcccCCCChhHhhccCCCCc
Confidence            985     9999999999999998766665543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.9e-12  Score=110.60  Aligned_cols=79  Identities=29%  Similarity=0.473  Sum_probs=72.2

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+   ..|+..+|+        +|++|++||.+.+..+++.+|.+..+.+|..+++++++||.+||.+||.+|+++ 
T Consensus       174 E~~~~---~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~-  249 (263)
T d2j4za1         174 EMIEG---RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML-  249 (263)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH-
T ss_pred             HHHcC---CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCH-
Confidence            78886   468888883        899999999999999999999999999999999999999999999999999974 


Q ss_pred             CCCchhhccCCcccc
Q psy1025          80 PNDGEAVRVHPFFRS   94 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~   94 (258)
                          ++|++||||..
T Consensus       250 ----~eil~hp~~~~  260 (263)
T d2j4za1         250 ----REVLEHPWITA  260 (263)
T ss_dssp             ----HHHHTCHHHHH
T ss_pred             ----HHHHcCcCcCC
Confidence                99999999963

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.07  E-value=4.9e-11  Score=104.95  Aligned_cols=79  Identities=25%  Similarity=0.449  Sum_probs=69.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++..|+...+.++    ..+|+++++||.+||.+||.+|
T Consensus       179 E~~~~---~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  255 (307)
T d1a06a_         179 EVLAQ---KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR  255 (307)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHcC---CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHC
Confidence            67775   468888884        89999999999999999999998876654    4689999999999999999999


Q ss_pred             cCCCCCCchhhccCCcccc
Q psy1025          76 LGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~   94 (258)
                      +++     +||++||||++
T Consensus       256 ~s~-----~eil~hp~~~~  269 (307)
T d1a06a_         256 FTC-----EQALQHPWIAG  269 (307)
T ss_dssp             CCH-----HHHHHSTTTTS
T ss_pred             cCH-----HHHhcCHhhCC
Confidence            985     99999999985

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.07  E-value=4.1e-11  Score=107.47  Aligned_cols=84  Identities=19%  Similarity=0.265  Sum_probs=73.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      ||+.+   ..|+..+|+        +|++|++||.+.+..+++.+|....+.++.    .+|+++++||.+||.+||.+|
T Consensus       195 Ev~~~---~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  271 (350)
T d1koaa2         195 EVAEG---KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR  271 (350)
T ss_dssp             HHHHT---CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHcC---CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence            77775   468888883        899999999999999999999988877664    589999999999999999999


Q ss_pred             cCCCCCCchhhccCCccccCChhh
Q psy1025          76 LGSGPNDGEAVRVHPFFRSINWSD   99 (258)
Q Consensus        76 Lg~~~~g~~eIk~HpfF~~idW~~   99 (258)
                      +++     ++|++||||...+|..
T Consensus       272 ~t~-----~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         272 MTI-----HQALEHPWLTPGNAPG  290 (350)
T ss_dssp             CCH-----HHHHHSTTTSCTTCCS
T ss_pred             cCH-----HHHhcCcccCCCCCCC
Confidence            985     9999999999887754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=104.89  Aligned_cols=82  Identities=17%  Similarity=0.235  Sum_probs=67.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---------------------------CCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---------------------------LIL   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---------------------------~~~   52 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+...++.+|+...                           ..+
T Consensus       185 E~~~~---~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
T d1blxa_         185 EVLLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF  261 (305)
T ss_dssp             HHHTT---CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGT
T ss_pred             chhcC---CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhc
Confidence            77875   568888984        9999999999999888888775310                           012


Q ss_pred             CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          53 PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        53 P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                      +..+++++++||.+||.+||.+|+++     +|+++||||++|++
T Consensus       262 ~~~~s~~~~dli~~mL~~dP~~R~sa-----~e~L~Hpff~~i~~  301 (305)
T d1blxa_         262 VTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYFQDLER  301 (305)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTTCCC
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCH-----HHHhcChhhcCchh
Confidence            34589999999999999999999985     99999999998875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=9.9e-11  Score=102.44  Aligned_cols=79  Identities=19%  Similarity=0.280  Sum_probs=65.8

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG---KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~---~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+.......+...   .+..|..++.++++||.+||.+||.+|+
T Consensus       186 E~~~~---~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  262 (293)
T d1yhwa1         186 EVVTR---KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG  262 (293)
T ss_dssp             HHHSS---SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSC
T ss_pred             hhhcC---CCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCc
Confidence            67775   467888883        999999999998887777776543   3455678999999999999999999999


Q ss_pred             CCCCCCchhhccCCcccc
Q psy1025          77 GSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~~   94 (258)
                      ++     +||++||||+.
T Consensus       263 s~-----~eil~Hp~~~~  275 (293)
T d1yhwa1         263 SA-----KELLQHQFLKI  275 (293)
T ss_dssp             CH-----HHHTTCGGGGG
T ss_pred             CH-----HHHhcCHhhCC
Confidence            74     99999999973

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.98  E-value=1.4e-10  Score=104.03  Aligned_cols=81  Identities=20%  Similarity=0.369  Sum_probs=70.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~   74 (258)
                      -|++.+   ..|+..+|+        +|++|.+||.+.+...++.+|....+.+|.    .+|+++++||.+||.+||.+
T Consensus       197 PE~~~~---~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  273 (352)
T d1koba_         197 PEIVDR---EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK  273 (352)
T ss_dssp             HHHHTT---CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGG
T ss_pred             HHHHcC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhH
Confidence            377775   568888883        999999999999999999999988777663    68999999999999999999


Q ss_pred             ccCCCCCCchhhccCCccccC
Q psy1025          75 RLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~i   95 (258)
                      |+++     ++|++||||++.
T Consensus       274 R~s~-----~eil~Hp~~~~~  289 (352)
T d1koba_         274 RLTV-----HDALEHPWLKGD  289 (352)
T ss_dssp             SCCH-----HHHHTSTTTSSC
T ss_pred             CcCH-----HHHhcCHhhCCC
Confidence            9985     999999999863

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.93  E-value=3.9e-10  Score=97.66  Aligned_cols=74  Identities=23%  Similarity=0.360  Sum_probs=65.5

Q ss_pred             CCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcccccccCCCCCCc
Q psy1025          16 TAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQRLGSGPNDG   83 (258)
Q Consensus        16 ~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~RLg~~~~g~   83 (258)
                      ..|+..+|+        +|++|.+||.+.+...++.+|+.....++.    .+|+++++||.+||..||.+|+++     
T Consensus       190 ~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~-----  264 (277)
T d1phka_         190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA-----  264 (277)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH-----
T ss_pred             CCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH-----
Confidence            457888884        999999999999999999999988776553    689999999999999999999985     


Q ss_pred             hhhccCCcccc
Q psy1025          84 EAVRVHPFFRS   94 (258)
Q Consensus        84 ~eIk~HpfF~~   94 (258)
                      ++|++||||+.
T Consensus       265 ~eil~h~~~~~  275 (277)
T d1phka_         265 EEALAHPFFQQ  275 (277)
T ss_dssp             HHHTTSGGGCT
T ss_pred             HHHHcCHHHHH
Confidence            99999999974

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.1e-10  Score=98.86  Aligned_cols=77  Identities=22%  Similarity=0.394  Sum_probs=64.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcccccccCCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPPYLTPDARELIRKLLKRQVAQRLGSG   79 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~   79 (258)
                      |++.+.  ..++.++|.        +|++|++||.+.      ..|+...+.+|..+|+++++||.+||.+||.+|+++ 
T Consensus       179 E~~~~~--~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~-  249 (273)
T d1xwsa_         179 EWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTF-  249 (273)
T ss_dssp             HHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH-
T ss_pred             HHHcCC--CCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCH-
Confidence            777752  345677883        899999999763      357788889999999999999999999999999975 


Q ss_pred             CCCchhhccCCccccCCh
Q psy1025          80 PNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        80 ~~g~~eIk~HpfF~~idW   97 (258)
                          +||++||||+++-.
T Consensus       250 ----~eil~hp~~~~~~~  263 (273)
T d1xwsa_         250 ----EEIQNHPWMQDVLL  263 (273)
T ss_dssp             ----HHHHTSGGGSSCCC
T ss_pred             ----HHHhcCHhhCCCCC
Confidence                99999999987643

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1e-10  Score=103.40  Aligned_cols=80  Identities=18%  Similarity=0.373  Sum_probs=70.3

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhccccc
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP----YLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kdP~~   74 (258)
                      .|++.+   ..|+..+|+        +|++|.+||.+.+...++.+|++..+.+|.    .+|.++++||.+||.+||.+
T Consensus       172 pe~~~~---~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  248 (321)
T d1tkia_         172 PEVHQH---DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKS  248 (321)
T ss_dssp             HHHHTT---CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG
T ss_pred             chhccC---CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhH
Confidence            466664   467888883        999999999999999999999999888874    69999999999999999999


Q ss_pred             ccCCCCCCchhhccCCcccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |+++     +||++||||+.
T Consensus       249 R~s~-----~eil~hp~~~~  263 (321)
T d1tkia_         249 RMTA-----SEALQHPWLKQ  263 (321)
T ss_dssp             SCCH-----HHHHHSHHHHS
T ss_pred             CcCH-----HHHhcCHhhcc
Confidence            9985     99999999973

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.8e-10  Score=99.09  Aligned_cols=82  Identities=21%  Similarity=0.377  Sum_probs=67.5

Q ss_pred             ccccCC--CCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhccccc
Q psy1025           8 SIVRNQ--KDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK---LILPPYLTPDARELIRKLLKRQVAQ   74 (258)
Q Consensus         8 EIi~~~--~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~---~~~P~~~S~ea~dLI~~LL~kdP~~   74 (258)
                      ||+.+.  ...+|+.++|.        +|++|.+||.+.+..+++.+|....   +..|..+|+++++||.+||.+||.+
T Consensus       180 E~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~  259 (288)
T d2jfla1         180 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA  259 (288)
T ss_dssp             HHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhH
Confidence            566432  13468888883        9999999999998888888888764   3345679999999999999999999


Q ss_pred             ccCCCCCCchhhccCCcccc
Q psy1025          75 RLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        75 RLg~~~~g~~eIk~HpfF~~   94 (258)
                      |+++     +||++||||..
T Consensus       260 R~t~-----~ell~hp~~~~  274 (288)
T d2jfla1         260 RWTT-----SQLLQHPFVTV  274 (288)
T ss_dssp             SCCH-----HHHTTSGGGCC
T ss_pred             CcCH-----HHHhcCcccCC
Confidence            9985     99999999973

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=6.1e-10  Score=95.94  Aligned_cols=77  Identities=25%  Similarity=0.347  Sum_probs=67.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcccccccCC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKL-ILPPYLTPDARELIRKLLKRQVAQRLGS   78 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~-~~P~~~S~ea~dLI~~LL~kdP~~RLg~   78 (258)
                      |++.+   ..|+..+|.        +|++|.+||.+.+..+++.+|....+ .+|..+|+++++||.+||..||.+|+++
T Consensus       184 E~l~~---~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~  260 (269)
T d2java1         184 EQMNR---MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV  260 (269)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHcC---CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCH
Confidence            77774   568888883        99999999999999999999988765 4677899999999999999999999974


Q ss_pred             CCCCchhhccCCcc
Q psy1025          79 GPNDGEAVRVHPFF   92 (258)
Q Consensus        79 ~~~g~~eIk~HpfF   92 (258)
                           +||++|||.
T Consensus       261 -----~ell~hp~i  269 (269)
T d2java1         261 -----EEILENPLI  269 (269)
T ss_dssp             -----HHHHTSTTC
T ss_pred             -----HHHHhCCcC
Confidence                 999999994

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.83  E-value=1.2e-09  Score=95.94  Aligned_cols=39  Identities=26%  Similarity=0.521  Sum_probs=36.5

Q ss_pred             CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          55 YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        55 ~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                      .++++++|||++||+.||.+|+++     +|+++||||++|.|+
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~ta-----~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLTA-----REAMEHPYFYTVVKD  328 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTSCCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccCCCCCC
Confidence            378999999999999999999985     999999999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.82  E-value=1.2e-09  Score=95.95  Aligned_cols=82  Identities=17%  Similarity=0.165  Sum_probs=67.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCC-C-CCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLI-L-PPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~-~-P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      ||+.+.....|+.++|.        +|++|.+||.+.+....+.+|...... + +..+|+++++||.+||.+||.+|++
T Consensus       181 E~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  260 (309)
T d1u5ra_         181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT  260 (309)
T ss_dssp             HHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcC
Confidence            77765434568888883        899999999998888888888776543 2 3468999999999999999999998


Q ss_pred             CCCCCchhhccCCcccc
Q psy1025          78 SGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~~   94 (258)
                      +     ++|++||||..
T Consensus       261 ~-----~ell~Hp~~~~  272 (309)
T d1u5ra_         261 S-----EVLLKHRFVLR  272 (309)
T ss_dssp             H-----HHHTTCHHHHS
T ss_pred             H-----HHHHhCHHhcC
Confidence            5     99999999963

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.6e-09  Score=94.03  Aligned_cols=83  Identities=13%  Similarity=0.123  Sum_probs=65.2

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C---C---------------CCC-----
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K---L---------------ILP-----   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~---~---------------~~P-----   53 (258)
                      -|++.+  ...|+.++|.        +|++|.+||.+.+..+++.+|...  .   .               .+|     
T Consensus       169 PE~~~~--~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (299)
T d1ua2a_         169 PELLFG--ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH  246 (299)
T ss_dssp             HHHHTT--CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred             HHHHcc--CCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChH
Confidence            467764  3568999983        999999999999988888777641  0   0               001     


Q ss_pred             ---CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCC
Q psy1025          54 ---PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSIN   96 (258)
Q Consensus        54 ---~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~id   96 (258)
                         ..+++++++||.+||+.||.+|+++     +|+++||||++..
T Consensus       247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa-----~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         247 HIFSAAGDDLLDLIQGLFLFNPCARITA-----TQALKMKYFSNRP  287 (299)
T ss_dssp             HHCTTCCHHHHHHHHHHHCSSTTTSCCH-----HHHHTSGGGTSSS
T ss_pred             HhcccCCHHHHHHHHHHccCChhhCcCH-----HHHhCCHhhCCCC
Confidence               2468999999999999999999985     9999999998643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.9e-09  Score=95.06  Aligned_cols=82  Identities=20%  Similarity=0.192  Sum_probs=63.8

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCC-----------------------C--
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLIL-----------------------P--   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~-----------------------P--   53 (258)
                      .|++.+  ...++.++|.        +|++|.+||.+.+.......|+......                       +  
T Consensus       187 pE~~~~--~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (348)
T d2gfsa1         187 PEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  264 (348)
T ss_dssp             HHHHTT--CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred             chhhcC--CccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence            466665  3456788883        8999999999998888777775421111                       1  


Q ss_pred             ------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          54 ------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        54 ------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                            ..+++++++||++||..||.+|+++     +|+++||||+.+
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-----~elL~Hp~f~~~  307 (348)
T d2gfsa1         265 NFANVFIGANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQY  307 (348)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGTTT
T ss_pred             chhhhcCCCCHHHHHHHHHHCcCChhhCcCH-----HHHhcCHhhCCC
Confidence                  2478999999999999999999985     999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=92.48  Aligned_cols=77  Identities=13%  Similarity=0.307  Sum_probs=62.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTA-DNRKKTIEKILRGK--LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~-~~~~~l~~~Il~~~--~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+    .|+..+|.        +|++|++||.+ .+...++..|....  ..++..+++++++||.+||..||.+|+
T Consensus       183 E~~~~----~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  258 (270)
T d1t4ha_         183 EMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  258 (270)
T ss_dssp             GGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHhCC----CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCc
Confidence            67764    48888883        99999999975 45666777777653  345567899999999999999999999


Q ss_pred             CCCCCCchhhccCCccc
Q psy1025          77 GSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~   93 (258)
                      ++     +||++||||+
T Consensus       259 s~-----~ell~Hp~fk  270 (270)
T d1t4ha_         259 SI-----KDLLNHAFFQ  270 (270)
T ss_dssp             CH-----HHHHTSGGGC
T ss_pred             CH-----HHHhCCcccC
Confidence            74     9999999995

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.77  E-value=1.9e-09  Score=92.72  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=62.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC--C---------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG--K---------------------------   49 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~--~---------------------------   49 (258)
                      .|++.+  ...++.++|.        +|++|++||.+.+....+.+|...  .                           
T Consensus       169 pE~~~~--~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T d1ob3a_         169 PDVLMG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW  246 (286)
T ss_dssp             HHHHTT--CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred             HHHHhC--CCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcch
Confidence            466665  3567888883        889999999998888877776531  0                           


Q ss_pred             CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccc
Q psy1025          50 LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        50 ~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      ..++..++++++|||++||++||.+|+++     .||++||||+
T Consensus       247 ~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~ell~Hp~f~  285 (286)
T d1ob3a_         247 ESFLKGLDESGIDLLSKMLKLDPNQRITA-----KQALEHAYFK  285 (286)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGG
T ss_pred             hhhcccCCHHHHHHHHHHccCChhHCcCH-----HHHhcCcccC
Confidence            01224578999999999999999999985     9999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.7e-09  Score=94.41  Aligned_cols=81  Identities=22%  Similarity=0.229  Sum_probs=62.1

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCCC------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILPP------------------------   54 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P~------------------------   54 (258)
                      .|++.+  ...|+..+|+        +|++|++||.+.+.......|......++.                        
T Consensus       190 PE~~~~--~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T d3blha1         190 PELLLG--ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  267 (318)
T ss_dssp             HHHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBC
T ss_pred             HHHHcC--CCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhccccccccc
Confidence            477775  3578889983        889999999988887776666442111110                        


Q ss_pred             --------CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          55 --------YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        55 --------~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                              ..+++++|||.+||..||.+|+++     +|+++||||+.
T Consensus       268 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa-----~elL~Hpff~~  310 (318)
T d3blha1         268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS-----DDALNHDFFWS  310 (318)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGSS
T ss_pred             chhhhccccCCHHHHHHHHHHCcCChhHCcCH-----HHHHcChhhcc
Confidence                    137789999999999999999985     99999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.2e-09  Score=94.31  Aligned_cols=79  Identities=11%  Similarity=0.215  Sum_probs=58.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHH-HHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRK-KTIEKILRGKLILP--PYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~-~l~~~Il~~~~~~P--~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+.  ..|+.++|+        +|++|++||...+.. ..+..+.......+  ..+|+++++||.+||.+||.+|+
T Consensus       175 E~~~~~--~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  252 (271)
T d1nvra_         175 ELLKRR--EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARI  252 (271)
T ss_dssp             HHHHCS--SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             hHhcCC--CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCc
Confidence            677752  335678883        899999999765443 33344444333322  46899999999999999999999


Q ss_pred             CCCCCCchhhccCCccc
Q psy1025          77 GSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        77 g~~~~g~~eIk~HpfF~   93 (258)
                      ++     ++|++||||+
T Consensus       253 t~-----~eil~hpwf~  264 (271)
T d1nvra_         253 TI-----PDIKKDRWYN  264 (271)
T ss_dssp             CH-----HHHTTCTTTT
T ss_pred             CH-----HHHhcCHhhC
Confidence            74     9999999996

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=5.5e-09  Score=92.70  Aligned_cols=81  Identities=22%  Similarity=0.315  Sum_probs=63.6

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC-----------------CCCC----------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG-----------------KLIL----------   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~-----------------~~~~----------   52 (258)
                      |++.+  ...|+..+|+        +|++|++||...+....+..|...                 ...+          
T Consensus       192 E~~~~--~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (350)
T d1q5ka_         192 ELIFG--ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK  269 (350)
T ss_dssp             HHHTT--CSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGG
T ss_pred             HHhhc--ccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhh
Confidence            56654  3678999984        899999999988887777666431                 1111          


Q ss_pred             --CCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          53 --PPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        53 --P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                        ...+++++++||.+||..||.+|+++     .|+++||||+.+
T Consensus       270 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta-----~e~L~Hp~f~~~  309 (350)
T d1q5ka_         270 VFRPRTPPEAIALCSRLLEYTPTARLTP-----LEACAHSFFDEL  309 (350)
T ss_dssp             TSCTTSCHHHHHHHHHHSCSSGGGSCCH-----HHHHTSGGGGGG
T ss_pred             hcccCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhccc
Confidence              13478999999999999999999985     999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.6e-09  Score=95.31  Aligned_cols=85  Identities=16%  Similarity=0.269  Sum_probs=62.1

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHH--------------------------------------
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKT--------------------------------------   41 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l--------------------------------------   41 (258)
                      ||+.+   ..|+..+|+        +|++|++||.+.+....                                      
T Consensus       173 Evl~~---~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (322)
T d1s9ja_         173 ERLQG---THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA  249 (322)
T ss_dssp             HHHHC---SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCC
T ss_pred             hHHcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchh
Confidence            78886   468888983        99999999987553221                                      


Q ss_pred             ----HHHHHcC-CCCCCC-CCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhh
Q psy1025          42 ----IEKILRG-KLILPP-YLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDV  100 (258)
Q Consensus        42 ----~~~Il~~-~~~~P~-~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l  100 (258)
                          ...+... ...+|. .+|.++++||.+||+.||.+|+++     +|+++||||+..+|+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta-----~e~L~Hpf~~~~~~~~~  309 (322)
T d1s9ja_         250 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL-----KQLMVHAFIKRSDAEEV  309 (322)
T ss_dssp             HHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSHHHHHHHHSCC
T ss_pred             HHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCH-----HHHhhCHhhCcCCcccc
Confidence                1111111 112222 368999999999999999999985     99999999998888643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.1e-09  Score=92.26  Aligned_cols=82  Identities=23%  Similarity=0.413  Sum_probs=61.9

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHHHHHHHHHcC-----C-------------CCCC-------
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAVKPPFTADNRKKTIEKILRG-----K-------------LILP-------   53 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~~l~~~Il~~-----~-------------~~~P-------   53 (258)
                      .|++.+  ...++.++|        |+|++|++||.+.+......+|...     .             ..++       
T Consensus       171 pE~~~~--~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (298)
T d1gz8a_         171 PEILLG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDF  248 (298)
T ss_dssp             HHHHTT--CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCH
T ss_pred             hhhhcc--ccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccch
Confidence            466664  234577788        2899999999998888777766531     0             0111       


Q ss_pred             ----CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccC
Q psy1025          54 ----PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSI   95 (258)
Q Consensus        54 ----~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~i   95 (258)
                          ..+|.++++||++||+.||.+|+++     +||++||||+++
T Consensus       249 ~~~~~~~s~~~~dll~~mL~~dP~~R~t~-----~ell~H~ff~~~  289 (298)
T d1gz8a_         249 SKVVPPLDEDGRSLLSQMLHYDPNKRISA-----KAALAHPFFQDV  289 (298)
T ss_dssp             HHHSTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHHTSGGGTTC
T ss_pred             hhhccCCCHHHHHHHHHHccCChhHCcCH-----HHHhCCHhhccC
Confidence                1468999999999999999999985     999999999765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3e-09  Score=94.10  Aligned_cols=85  Identities=19%  Similarity=0.262  Sum_probs=63.6

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCC-----------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGK-----------------------------   49 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~-----------------------------   49 (258)
                      -|++.+  ...++.++|.        +|++|++||.+.+....+..+....                             
T Consensus       187 PE~~~~--~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (346)
T d1cm8a_         187 PEVILN--WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK  264 (346)
T ss_dssp             THHHHT--TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCC
T ss_pred             HHHHcC--CCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccccc
Confidence            477765  3567888883        8999999999887766654443210                             


Q ss_pred             --CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChh
Q psy1025          50 --LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWS   98 (258)
Q Consensus        50 --~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~   98 (258)
                        ...+..+++++++||.+||..||.+|+++     ++|++||||+++.+.
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta-----~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         265 DFASILTNASPLAVNLLEKMLVLDAEQRVTA-----GEALAHPYFESLHDT  310 (346)
T ss_dssp             CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH-----HHHHHSGGGTTTC--
T ss_pred             chHHhccCCCHHHHHHHHHHCcCChhHCcCH-----HHHhcChhhCcCCCc
Confidence              01123578999999999999999999985     999999999987654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=1.8e-09  Score=95.50  Aligned_cols=56  Identities=11%  Similarity=0.243  Sum_probs=44.8

Q ss_pred             CCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCChhhhhcCCCCCCCcCcCCCCCCCC
Q psy1025          56 LTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINWSDVLSRKLEPPFKPSLTGEDDVS  120 (258)
Q Consensus        56 ~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW~~l~~r~~~pPf~P~~~~~~D~s  120 (258)
                      .+++++|||.+||..||.+|+++     +|+++||||+++.+.    ..++.|..+...+..|+.
T Consensus       300 ~~~~~~dll~~mL~~dP~~Rpta-----~e~L~Hp~f~~~~~~----~~~~~p~~~~~~~~~~~~  355 (362)
T d1q8ya_         300 EAKEISDFLSPMLQLDPRKRADA-----GGLVNHPWLKDTLGM----EEIRVPDRELYGSGSDIP  355 (362)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCH-----HHHHTCGGGTTCTTC----TTCCCTTSCTTCBSTTST
T ss_pred             cCHHHHHHHHHHCCCChhHCcCH-----HHHhcCcccCCCCCc----ccCCCCCcccCCCCCCCC
Confidence            46889999999999999999985     999999999966543    457777777666555544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.3e-09  Score=96.76  Aligned_cols=78  Identities=24%  Similarity=0.358  Sum_probs=61.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHH----HHHHHcCCCCCCC----CCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKT----IEKILRGKLILPP----YLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l----~~~Il~~~~~~P~----~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.+....    ..+|....+.+|.    .+|+++++||++||++|
T Consensus       183 E~~~~---~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  259 (335)
T d2ozaa1         183 EVLGP---EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE  259 (335)
T ss_dssp             CCCCG---GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSS
T ss_pred             HHHcC---CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCC
Confidence            67775   468888883        89999999987664443    3445556667764    48999999999999999


Q ss_pred             cccccCCCCCCchhhccCCccc
Q psy1025          72 VAQRLGSGPNDGEAVRVHPFFR   93 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~HpfF~   93 (258)
                      |.+|+++     .+|++||||.
T Consensus       260 P~~R~s~-----~eil~hp~~~  276 (335)
T d2ozaa1         260 PTQRMTI-----TEFMNHPWIM  276 (335)
T ss_dssp             TTTSCCH-----HHHHHSHHHH
T ss_pred             hhHCcCH-----HHHHcCHHhh
Confidence            9999974     9999999996

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.3e-08  Score=87.18  Aligned_cols=81  Identities=21%  Similarity=0.391  Sum_probs=59.9

Q ss_pred             cccccCCCCCCCCceehH--------hhhcCCCCC-CCCCHHHHHHHHHcC--C--------------------------
Q psy1025           7 ASIVRNQKDTAHTKAERN--------ILEAVKPPF-TADNRKKTIEKILRG--K--------------------------   49 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD~--------~ml~G~pPF-~~~~~~~l~~~Il~~--~--------------------------   49 (258)
                      .|++.+  ...++.++|.        +|++|..|| .+.+..+.+.+|...  .                          
T Consensus       170 pe~~~~--~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (292)
T d1unla_         170 PDVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS  247 (292)
T ss_dssp             HHHHTT--CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCC
T ss_pred             hhHhcc--CCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccch
Confidence            466665  3457888883        888988775 566777766665421  0                          


Q ss_pred             -CCCCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          50 -LILPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        50 -~~~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                       ...+..+++++++||++||+.||.+|+++     +||++||||.+
T Consensus       248 ~~~~~~~~s~~~~dll~~mL~~dP~~R~sa-----~e~L~Hp~f~~  288 (292)
T d1unla_         248 LVNVVPKLNATGRDLLQNLLKCNPVQRISA-----EEALQHPYFSD  288 (292)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHTTSGGGSS
T ss_pred             hhhccccCCHHHHHHHHHHccCChhHCcCH-----HHHhcChhhcC
Confidence             11223578999999999999999999985     99999999974

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=7.2e-09  Score=92.11  Aligned_cols=82  Identities=16%  Similarity=0.221  Sum_probs=61.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHc----------------------CCCCC-----
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILR----------------------GKLIL-----   52 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~----------------------~~~~~-----   52 (258)
                      |++++   ..|+.++|.        +|++|++||.+.+......+|+.                      .....     
T Consensus       188 E~l~~---~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T d2b1pa1         188 EVILG---MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_dssp             HHHTT---CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCH
T ss_pred             hhhcC---CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccc
Confidence            77876   467778883        88999999998887776665542                      11000     


Q ss_pred             ---------C------CCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCccccCCh
Q psy1025          53 ---------P------PYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRSINW   97 (258)
Q Consensus        53 ---------P------~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~idW   97 (258)
                               +      ..+|.++++||++||..||.+|+++     +||++||||+..-|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta-----~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-----DDALQHPYINVWYD  319 (355)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH-----HHHHTSTTTGGGCC
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH-----HHHhcCcccCCCCC
Confidence                     0      0146789999999999999999985     99999999986433

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=2.5e-08  Score=88.17  Aligned_cols=82  Identities=22%  Similarity=0.280  Sum_probs=61.9

Q ss_pred             ccccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcC------------------------C--CC
Q psy1025           6 KASIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRG------------------------K--LI   51 (258)
Q Consensus         6 ~~EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~------------------------~--~~   51 (258)
                      --|++.+  ...|+.++|.        +|++|.+||.+.+.......+...                        .  ..
T Consensus       180 aPE~l~~--~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (345)
T d1pmea_         180 APEIMLN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK  257 (345)
T ss_dssp             CGGGTTT--BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC
T ss_pred             hHHHhhc--CCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCC
Confidence            3577765  3578888883        999999999988776655544321                        0  00


Q ss_pred             -----CCCCCCHHHHHHHHHHhhcccccccCCCCCCchhhccCCcccc
Q psy1025          52 -----LPPYLTPDARELIRKLLKRQVAQRLGSGPNDGEAVRVHPFFRS   94 (258)
Q Consensus        52 -----~P~~~S~ea~dLI~~LL~kdP~~RLg~~~~g~~eIk~HpfF~~   94 (258)
                           ....+|.++++||.+||++||.+|+++     +++++||||+.
T Consensus       258 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta-----~e~L~hpf~~~  300 (345)
T d1pmea_         258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEV-----EQALAHPYLEQ  300 (345)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCH-----HHHHTSGGGTT
T ss_pred             CCHHHhCCCCCHHHHHHHHHHccCChhHCcCH-----HHHhcCHhhcc
Confidence                 123578999999999999999999984     99999999974

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.28  E-value=2.1e-07  Score=79.38  Aligned_cols=73  Identities=21%  Similarity=0.269  Sum_probs=60.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKILRGKLILP----PYLTPDARELIRKLLKRQVAQR   75 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~Il~~~~~~P----~~~S~ea~dLI~~LL~kdP~~R   75 (258)
                      |++.+   ..|+..+|.        +|++|.+||.+.+..+++.+++......|    ..+|+++++||.+||.+||.+|
T Consensus       184 E~~~~---~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R  260 (277)
T d1o6ya_         184 EQARG---DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR  260 (277)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHcC---CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHC
Confidence            67775   468888883        99999999999999998888887765543    4689999999999999999999


Q ss_pred             cCCCCCCchhhc
Q psy1025          76 LGSGPNDGEAVR   87 (258)
Q Consensus        76 Lg~~~~g~~eIk   87 (258)
                      +.+    +++++
T Consensus       261 ~~s----a~~l~  268 (277)
T d1o6ya_         261 YQT----AAEMR  268 (277)
T ss_dssp             CSS----HHHHH
T ss_pred             HhH----HHHHH
Confidence            964    45554

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=9.6e-08  Score=82.07  Aligned_cols=82  Identities=12%  Similarity=0.135  Sum_probs=64.8

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+..++...|..+ .+.+|..++.++++||.+||..||.+|++
T Consensus       180 E~l~~---~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs  256 (277)
T d1xbba_         180 ECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPG  256 (277)
T ss_dssp             HHHHH---CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hhhcC---CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcC
Confidence            55554   34666777        38887 99999999998888888875 46778899999999999999999999997


Q ss_pred             CCCCCchhh---ccCCccccCCh
Q psy1025          78 SGPNDGEAV---RVHPFFRSINW   97 (258)
Q Consensus        78 ~~~~g~~eI---k~HpfF~~idW   97 (258)
                      +     .+|   ++|+|+..+++
T Consensus       257 ~-----~~i~~~L~~~~~~~~~e  274 (277)
T d1xbba_         257 F-----AAVELRLRNYYYDVVNE  274 (277)
T ss_dssp             H-----HHHHHHHHHHHHHHHHH
T ss_pred             H-----HHHHHHhhCHHhhcCCC
Confidence            5     666   46777765543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=4.2e-07  Score=77.42  Aligned_cols=74  Identities=19%  Similarity=0.238  Sum_probs=62.3

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+..+++..|..+. +.+|..++.++++||.+||..||.+|++
T Consensus       179 E~l~~---~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  255 (273)
T d1mp8a_         179 ESINF---RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPR  255 (273)
T ss_dssp             HHHHH---CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHhcc---CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence            66664   46888888        37776 999999999999999988764 6778899999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     .+|++|
T Consensus       256 ~-----~ei~~~  262 (273)
T d1mp8a_         256 F-----TELKAQ  262 (273)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     888765

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6.7e-07  Score=78.20  Aligned_cols=74  Identities=11%  Similarity=0.052  Sum_probs=59.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|+        +|++ |.+||.+.+....+.+++..  .+..|..+++++++||.+||..||.+|+
T Consensus       236 E~l~~---~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RP  312 (325)
T d1rjba_         236 ESLFE---GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP  312 (325)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHcC---CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            66664   467888883        8886 99999987766666666654  3556778999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     ++|.+|
T Consensus       313 t~-----~ei~~~  320 (325)
T d1rjba_         313 SF-----PNLTSF  320 (325)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            85     888765

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.4e-06  Score=73.87  Aligned_cols=74  Identities=12%  Similarity=0.163  Sum_probs=62.2

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |+.||.+.+..++..+|... .+..|...++++++||.+||..||.+|++
T Consensus       171 E~~~~---~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt  247 (258)
T d1k2pa_         171 EVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPT  247 (258)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             HHhcC---CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcC
Confidence            67775   45778888        38887 89999999999999998875 45667789999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     ++|++|
T Consensus       248 ~-----~eil~~  254 (258)
T d1k2pa_         248 F-----KILLSN  254 (258)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            4     888876

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=4.4e-07  Score=78.24  Aligned_cols=81  Identities=11%  Similarity=0.100  Sum_probs=62.4

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+..++...|..+ .+.+|..+++++.+||.+||..||.+|++
T Consensus       182 E~~~~---~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs  258 (285)
T d1u59a_         182 ECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD  258 (285)
T ss_dssp             HHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             HHHhC---CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcC
Confidence            55553   34666777        37887 99999988888888888875 46788899999999999999999999997


Q ss_pred             CCCCCchhhccCCccc
Q psy1025          78 SGPNDGEAVRVHPFFR   93 (258)
Q Consensus        78 ~~~~g~~eIk~HpfF~   93 (258)
                      +  ..+.+.++|+|+.
T Consensus       259 ~--~~i~~~L~~~~~~  272 (285)
T d1u59a_         259 F--LTVEQRMRACYYS  272 (285)
T ss_dssp             H--HHHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHHHH
Confidence            5  1233335677763

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=4.6e-06  Score=71.65  Aligned_cols=87  Identities=17%  Similarity=0.341  Sum_probs=67.7

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|.        +|++ |.+||.+.+..+++..|... .+..|..+++++++||.+||..||.+|++
T Consensus       184 E~~~~---~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  260 (285)
T d1fmka3         184 EAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPT  260 (285)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhC---CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcC
Confidence            66664   457777773        7777 67778888888888888765 45678899999999999999999999997


Q ss_pred             CCCCCchhhcc--CCccccCChhhhhcCCCCCCCcCc
Q psy1025          78 SGPNDGEAVRV--HPFFRSINWSDVLSRKLEPPFKPS  112 (258)
Q Consensus        78 ~~~~g~~eIk~--HpfF~~idW~~l~~r~~~pPf~P~  112 (258)
                      +     ++|.+  |+||..          ..|++.|.
T Consensus       261 ~-----~~i~~~L~~~~~~----------~~p~~~p~  282 (285)
T d1fmka3         261 F-----EYLQAFLEDYFTS----------TEPQYQPG  282 (285)
T ss_dssp             H-----HHHHHHHHTTTSC----------SCCCCCCS
T ss_pred             H-----HHHHHHHhhhhcC----------CCCCCCCC
Confidence            5     88876  777754          34666664

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.5e-06  Score=72.88  Aligned_cols=77  Identities=17%  Similarity=0.182  Sum_probs=57.5

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCCCCCHH-HHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFTADNRK-KTIEKILRGKL-----ILPPYLTPDARELIRKLLKRQVA   73 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~~~~~~-~l~~~Il~~~~-----~~P~~~S~ea~dLI~~LL~kdP~   73 (258)
                      |++.++....|+..+|        |+|++|+.||.+.+.. .+...+.....     .++..+++++++||.+||..||.
T Consensus       176 E~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~  255 (276)
T d1uwha_         176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRD  255 (276)
T ss_dssp             HHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHh
Confidence            7777654556888888        3999999999876544 44444444321     23557899999999999999999


Q ss_pred             cccCCCCCCchhhccC
Q psy1025          74 QRLGSGPNDGEAVRVH   89 (258)
Q Consensus        74 ~RLg~~~~g~~eIk~H   89 (258)
                      +|+++     .+|.+|
T Consensus       256 ~RPt~-----~~il~~  266 (276)
T d1uwha_         256 ERPLF-----PQILAS  266 (276)
T ss_dssp             GSCCH-----HHHHHH
T ss_pred             HCcCH-----HHHHHH
Confidence            99974     888765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.9e-06  Score=72.36  Aligned_cols=72  Identities=14%  Similarity=0.109  Sum_probs=58.6

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRGKL--ILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~~~--~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+..+++.+|.....  ..|..++.++++||.+||..||.+|+
T Consensus       184 E~~~~---~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP  260 (273)
T d1u46a_         184 ESLKT---RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP  260 (273)
T ss_dssp             HHHHH---CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhC---CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCc
Confidence            55554   34666677        38887 8999999999999999987654  44568999999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      ++     .+|.
T Consensus       261 t~-----~ei~  266 (273)
T d1u46a_         261 TF-----VALR  266 (273)
T ss_dssp             CH-----HHHH
T ss_pred             CH-----HHHH
Confidence            75     7764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=2.4e-06  Score=72.65  Aligned_cols=79  Identities=16%  Similarity=0.288  Sum_probs=62.8

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||...+..+++..|..+ .+..|..++.++++||.+||..||.+|++
T Consensus       180 E~~~~---~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt  256 (272)
T d1qpca_         180 EAINY---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT  256 (272)
T ss_dssp             HHHHH---CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhC---CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcC
Confidence            55553   34666777        38888 67778888888888888775 45678889999999999999999999997


Q ss_pred             CCCCCchhhcc--CCcccc
Q psy1025          78 SGPNDGEAVRV--HPFFRS   94 (258)
Q Consensus        78 ~~~~g~~eIk~--HpfF~~   94 (258)
                      +     ++|.+  |+||..
T Consensus       257 ~-----~ei~~~L~~~fts  270 (272)
T d1qpca_         257 F-----DYLRSVLEDFFTA  270 (272)
T ss_dssp             H-----HHHHHHHHHHHHH
T ss_pred             H-----HHHHHHhhhhhhc
Confidence            5     88877  788753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=5.1e-06  Score=71.51  Aligned_cols=73  Identities=11%  Similarity=0.074  Sum_probs=60.4

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+...++..|..+ .+.+|..+++++++||.+||..||.+|++
T Consensus       207 E~l~~---~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps  283 (299)
T d1fgka_         207 EALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT  283 (299)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHhcC---CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcC
Confidence            66664   46888888        38886 79999999999988888765 46778899999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       284 ~-----~eil~  289 (299)
T d1fgka_         284 F-----KQLVE  289 (299)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     77753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.9e-06  Score=69.75  Aligned_cols=74  Identities=12%  Similarity=0.173  Sum_probs=61.0

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||...+..+++..|..+ .+..|...++++.+||.+||..||.+|++
T Consensus       172 E~l~~---~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps  248 (263)
T d1sm2a_         172 EVFSF---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPA  248 (263)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhcC---CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcC
Confidence            67775   46888888        38887 68888888888888888775 45667889999999999999999999997


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      +     ++|.+|
T Consensus       249 ~-----~~il~~  255 (263)
T d1sm2a_         249 F-----SRLLRQ  255 (263)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            4     888765

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=9.6e-06  Score=69.90  Aligned_cols=73  Identities=12%  Similarity=0.100  Sum_probs=59.9

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+..++...|... .+..|..++.++++||.+||..||.+|++
T Consensus       203 E~~~~---~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs  279 (299)
T d1jpaa_         203 EAIQY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPK  279 (299)
T ss_dssp             HHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHhc---CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence            66664   45778888        38887 89999999999988888765 35667789999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       280 ~-----~ei~~  285 (299)
T d1jpaa_         280 F-----GQIVN  285 (299)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     67654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=5.3e-06  Score=70.36  Aligned_cols=73  Identities=15%  Similarity=0.201  Sum_probs=60.4

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |++||...+...++..|.++ .+.+|..+++++++||.+||..||.+|++
T Consensus       170 E~l~~---~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps  246 (262)
T d1byga_         170 EALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS  246 (262)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhC---CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcC
Confidence            56664   35788888        38887 89999998888888888764 56788899999999999999999999998


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       247 ~-----~~l~~  252 (262)
T d1byga_         247 F-----LQLRE  252 (262)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     67654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=5.3e-06  Score=71.97  Aligned_cols=76  Identities=14%  Similarity=0.089  Sum_probs=62.5

Q ss_pred             ccccCCCCCCCCceehH--------hhhc-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEA-VKPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~-G~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|.        +|++ |.+||.+.+..++...|..+. +..|..++.++++||.+||..||.+|++
T Consensus       183 E~l~~---~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs  259 (317)
T d1xkka_         183 ESILH---RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK  259 (317)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhc---CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcC
Confidence            66765   357888883        7887 899999888888888777654 6778889999999999999999999998


Q ss_pred             CCCCCchhhccCCc
Q psy1025          78 SGPNDGEAVRVHPF   91 (258)
Q Consensus        78 ~~~~g~~eIk~Hpf   91 (258)
                      +     .+|..|..
T Consensus       260 ~-----~eil~~l~  268 (317)
T d1xkka_         260 F-----RELIIEFS  268 (317)
T ss_dssp             H-----HHHHHHHH
T ss_pred             H-----HHHHHHHH
Confidence            5     89988743

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=5.6e-06  Score=71.54  Aligned_cols=75  Identities=15%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcC-CCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAV-KPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G-~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      .|++.+   ..|+..+|        |+|++| .+||.+.+..+++..|..+ .+.+|..+++++++||.+||..||.+|+
T Consensus       195 PE~l~~---~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP  271 (309)
T d1fvra_         195 IESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP  271 (309)
T ss_dssp             HHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHHhcc---CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            356654   45777778        378885 5789999999999998775 5677888999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     ++|.+|
T Consensus       272 s~-----~eil~~  279 (309)
T d1fvra_         272 SF-----AQILVS  279 (309)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            85     899876

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1e-05  Score=69.29  Aligned_cols=73  Identities=10%  Similarity=0.105  Sum_probs=56.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcC-CCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAV-KPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G-~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++| .|||.+.+...++..|... .+.+|..++.++++||.+||..||.+|++
T Consensus       186 E~~~~---~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  262 (287)
T d1opja_         186 ESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS  262 (287)
T ss_dssp             HHHHH---CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHcC---CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence            66774   46788888        378885 5566677777777766554 46778889999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       263 ~-----~ei~~  268 (287)
T d1opja_         263 F-----AEIHQ  268 (287)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     78753

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.2e-05  Score=69.43  Aligned_cols=73  Identities=12%  Similarity=0.132  Sum_probs=58.5

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcC-CCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAV-KPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G-~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++| .+||.+.+..+++..|.++. +..|..++.++++||.+||..||.+|++
T Consensus       205 e~l~~---~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs  281 (308)
T d1p4oa_         205 ESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS  281 (308)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHcc---CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcC
Confidence            45553   35676777        378877 69999999999999988754 4567889999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      .     ++|.+
T Consensus       282 ~-----~~il~  287 (308)
T d1p4oa_         282 F-----LEIIS  287 (308)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     77764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.67  E-value=1.9e-05  Score=67.72  Aligned_cols=73  Identities=14%  Similarity=0.101  Sum_probs=59.5

Q ss_pred             cccccCCCCCCCCceeh--------HhhhcC-CCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           7 ASIVRNQKDTAHTKAER--------NILEAV-KPPFTADNRKKTIEKILRGK-LILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         7 ~EIi~~~~~~gh~~~vD--------~~ml~G-~pPF~~~~~~~l~~~Il~~~-~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      .|++.+   ..|+..+|        |+|++| .+||.+.+..++...|..+. +..|..+++++.+||.+||..||.+|+
T Consensus       211 PE~~~~---~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RP  287 (301)
T d1lufa_         211 PESIFY---NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRP  287 (301)
T ss_dssp             HHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHcc---CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCc
Confidence            366664   46788888        378887 58999999999999988775 446788999999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      ++     .+|.
T Consensus       288 t~-----~ev~  293 (301)
T d1lufa_         288 SF-----CSIH  293 (301)
T ss_dssp             CH-----HHHH
T ss_pred             CH-----HHHH
Confidence            75     7764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.3e-05  Score=68.60  Aligned_cols=74  Identities=12%  Similarity=0.150  Sum_probs=55.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcC-CCCCCCCCHHHHHHHH-Hc-CCCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAV-KPPFTADNRKKTIEKI-LR-GKLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G-~pPF~~~~~~~l~~~I-l~-~~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|.        +|++| .+||.+.+....+..+ .. ..+.+|..+++++++||.+||..||.+|+
T Consensus       206 E~l~~---~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  282 (299)
T d1ywna1         206 ETIFD---RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP  282 (299)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHhhc---CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            56664   467888883        78875 6789876554444444 33 34667888999999999999999999999


Q ss_pred             CCCCCCchhhccC
Q psy1025          77 GSGPNDGEAVRVH   89 (258)
Q Consensus        77 g~~~~g~~eIk~H   89 (258)
                      ++     ++|.+|
T Consensus       283 t~-----~eil~~  290 (299)
T d1ywna1         283 TF-----SELVEH  290 (299)
T ss_dssp             CH-----HHHHHH
T ss_pred             CH-----HHHHHH
Confidence            85     888876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=3.2e-05  Score=66.68  Aligned_cols=72  Identities=10%  Similarity=0.125  Sum_probs=55.6

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhccccccc
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG--KLILPPYLTPDARELIRKLLKRQVAQRL   76 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~--~~~~P~~~S~ea~dLI~~LL~kdP~~RL   76 (258)
                      |++.+   ..|+..+|        |+|++ |.+||.+.+....+.+++..  .+..|..++.++++||.+||..||.+|+
T Consensus       217 E~~~~---~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RP  293 (311)
T d1t46a_         217 ESIFN---CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRP  293 (311)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhcC---CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCc
Confidence            66663   46788888        38887 78888777776666666543  3556778999999999999999999999


Q ss_pred             CCCCCCchhhc
Q psy1025          77 GSGPNDGEAVR   87 (258)
Q Consensus        77 g~~~~g~~eIk   87 (258)
                      ++     ++|.
T Consensus       294 s~-----~~il  299 (311)
T d1t46a_         294 TF-----KQIV  299 (311)
T ss_dssp             CH-----HHHH
T ss_pred             CH-----HHHH
Confidence            75     7765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.42  E-value=6.4e-06  Score=70.47  Aligned_cols=88  Identities=8%  Similarity=0.077  Sum_probs=55.9

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCCCHHHHHHHH---HcCCC-----CCCCCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTADNRKKTIEKI---LRGKL-----ILPPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~~~~~l~~~I---l~~~~-----~~P~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.|   ..|+..+|.        +|++|.+||...+.......+   ....+     ..+..+++++.+||.+||.++
T Consensus       183 E~~~~---~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~  259 (299)
T d1ckia_         183 NTHLG---IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLR  259 (299)
T ss_dssp             HHHTT---BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSC
T ss_pred             HHHhC---CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCC
Confidence            56664   468888883        899999999875554433222   11111     124578999999999999999


Q ss_pred             cccccCCCCCCchhhccCCccc-------cCChhhh
Q psy1025          72 VAQRLGSGPNDGEAVRVHPFFR-------SINWSDV  100 (258)
Q Consensus        72 P~~RLg~~~~g~~eIk~HpfF~-------~idW~~l  100 (258)
                      |.+|+++  ..+.++++|+|.+       ..||+.+
T Consensus       260 p~~RP~~--~~i~~~l~~~~~~~~~~~~~~~Dw~~~  293 (299)
T d1ckia_         260 FDDKPDY--SYLRQLFRNLFHRQGFSYDYVFDWNML  293 (299)
T ss_dssp             TTCCCCH--HHHHHHHHHHHHHHTCCCSCCCHHHHG
T ss_pred             hhHCcCH--HHHHHHHHHHHHHcCCCCCCCcCchhh
Confidence            9999874  1233556676653       2567655

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00012  Score=62.00  Aligned_cols=73  Identities=14%  Similarity=0.125  Sum_probs=57.3

Q ss_pred             ccccCCCCCCCCceeh--------Hhhhc-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEA-VKPPFTADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~-G~pPF~~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++ |.+||...+..+++..|..+ .+..|..++.++++||.+||..||.+|++
T Consensus       183 E~l~~---~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt  259 (283)
T d1mqba_         183 EAISY---RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPK  259 (283)
T ss_dssp             HHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHcc---CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcC
Confidence            66764   45777788        37887 56777777888888887764 45677789999999999999999999997


Q ss_pred             CCCCCchhhcc
Q psy1025          78 SGPNDGEAVRV   88 (258)
Q Consensus        78 ~~~~g~~eIk~   88 (258)
                      +     .+|.+
T Consensus       260 ~-----~eil~  265 (283)
T d1mqba_         260 F-----ADIVS  265 (283)
T ss_dssp             H-----HHHHH
T ss_pred             H-----HHHHH
Confidence            5     77754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0001  Score=63.64  Aligned_cols=74  Identities=16%  Similarity=0.138  Sum_probs=51.7

Q ss_pred             ccccCCCCCCCCceeh--------HhhhcCCCCCC-CCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhhcccccccC
Q psy1025           8 SIVRNQKDTAHTKAER--------NILEAVKPPFT-ADNRKKTIEKILRG-KLILPPYLTPDARELIRKLLKRQVAQRLG   77 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD--------~~ml~G~pPF~-~~~~~~l~~~Il~~-~~~~P~~~S~ea~dLI~~LL~kdP~~RLg   77 (258)
                      |++.+   ..|+..+|        |+|++|..||. ..+...+...|..+ .+..|..++.++.+||.+||..||.+|++
T Consensus       204 E~~~~---~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs  280 (311)
T d1r0pa_         204 ESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS  280 (311)
T ss_dssp             HHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHhc---CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcC
Confidence            55553   35777777        38888665554 44555566666655 45567889999999999999999999998


Q ss_pred             CCCCCchhhccC
Q psy1025          78 SGPNDGEAVRVH   89 (258)
Q Consensus        78 ~~~~g~~eIk~H   89 (258)
                      .     .||.+|
T Consensus       281 ~-----~ei~~~  287 (311)
T d1r0pa_         281 F-----SELVSR  287 (311)
T ss_dssp             H-----HHHHHH
T ss_pred             H-----HHHHHH
Confidence            5     888876

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=95.62  E-value=0.003  Score=53.29  Aligned_cols=67  Identities=9%  Similarity=0.014  Sum_probs=48.0

Q ss_pred             ccccCCCCCCCCceehH--------hhhcCCCCCCCC---CHHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhcc
Q psy1025           8 SIVRNQKDTAHTKAERN--------ILEAVKPPFTAD---NRKKTIEKILRGKLI-----LPPYLTPDARELIRKLLKRQ   71 (258)
Q Consensus         8 EIi~~~~~~gh~~~vD~--------~ml~G~pPF~~~---~~~~l~~~Il~~~~~-----~P~~~S~ea~dLI~~LL~kd   71 (258)
                      |++.+   ..|+..+|+        +|++|.+||.+.   +....+.+|......     ++..+++++.+|+..|+..+
T Consensus       183 E~~~~---~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~  259 (293)
T d1csna_         183 NTHLG---REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLA  259 (293)
T ss_dssp             HHHTT---CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCC
T ss_pred             HHhcC---CCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCC
Confidence            66664   468888883        899999999754   344444455432221     23568899999999999999


Q ss_pred             cccccC
Q psy1025          72 VAQRLG   77 (258)
Q Consensus        72 P~~RLg   77 (258)
                      |..|+.
T Consensus       260 ~~~rP~  265 (293)
T d1csna_         260 FDATPD  265 (293)
T ss_dssp             TTCCCC
T ss_pred             cccCcC
Confidence            999985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.86  E-value=0.36  Score=40.03  Aligned_cols=60  Identities=12%  Similarity=0.008  Sum_probs=37.6

Q ss_pred             HhhhcCCCCCCC---------------CCHHHHHHHHHcCCC--CCCCC-----CCHHHHHHHHHHhhcccccccCCCCC
Q psy1025          24 NILEAVKPPFTA---------------DNRKKTIEKILRGKL--ILPPY-----LTPDARELIRKLLKRQVAQRLGSGPN   81 (258)
Q Consensus        24 ~~ml~G~pPF~~---------------~~~~~l~~~Il~~~~--~~P~~-----~S~ea~dLI~~LL~kdP~~RLg~~~~   81 (258)
                      |+|++|.+||..               .+.......+....+  .+|..     ......+|+.+||..||.+|+++   
T Consensus       209 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~---  285 (303)
T d1vjya_         209 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA---  285 (303)
T ss_dssp             HHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCH---
T ss_pred             HHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCH---
Confidence            488999887732               123333333333322  33332     22457899999999999999985   


Q ss_pred             Cchhhcc
Q psy1025          82 DGEAVRV   88 (258)
Q Consensus        82 g~~eIk~   88 (258)
                        .+|.+
T Consensus       286 --~ei~~  290 (303)
T d1vjya_         286 --LRIKK  290 (303)
T ss_dssp             --HHHHH
T ss_pred             --HHHHH
Confidence              77754