Psyllid ID: psy11026

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVKPKLNVKLKAPSSSGVSRDQK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEccccccEEEEccEEEcccccccccccccccccHHHHHcccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccccccccccccccHHcccccccHHHHccccccEEEEEEEcccEEEEcccccEEEccEEEcccEcccccEccEEEEEEEEEEcccccEEEEEEccccccEEEEEccccccccccHHHHHcccccHHHHHHHHcccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgerkgtnkyyppdydpsvgglnkFLGTHALRERARKLHMGIMIIRFelpyniwcegcnnhigmgvrynaekkkvgmyystpvyqfrmkchlcdshfeiktdpgnldyVIVSGArrqenrwnpleneqivpetKEVSrklfddpmyklehgtndmssskskASHLNKLLDRQesvwkndfdaNRVLRDSFRKKKKQLKALQDkdnallsksslslklvpehkndIRLASLYKyqhvkpklnvklkapsssgvsrdqk
Flexible Loop (DISEMBL)
mgerkgtnkyyppdydpsvGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGArrqenrwnpleneqivpetkevsrKLFDDPMYKLehgtndmsssksKASHLNKLLDrqesvwkndfdanrvLRDSFRKKKKQLkalqdkdnallsksslslklvpehKNDIRLASLYkyqhvkpklnvklkapsssgvsrdqk
Low Complexity Region (SEG)
MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANRVLRDSFRkkkkqlkalqdkdNAllsksslslklVPEHKNDIRLASLYKYQHVKPKLNVKLKAPSSSGVSRDQK
Disordered region (IsUnstruct)
*****************SVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGAR**********************************************************************************************************KNDIRLASLYKYQHVK********************
Disordered Region (DISOPRED)
MGERKGTNKYYPPDYDPS*************************IIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN*************************************************LDRQESVWKNDFD****************************************************************************
Disordered Region (DISEMBL)
********KYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHG***************KLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVKPKLNVKL*************
Disordered Region (DISPRO)
****KGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLEN*******KEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDAxxxxxxxxxxxxxxxxxxxxxDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVKPKLNVKLKAPSSSGVSRDQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q7K0F0	316	Coiled-coil domain-contai	yes	N/A	0.910	0.740	0.675	7e-96
P13994	396	Coiled-coil domain-contai	yes	N/A	0.902	0.585	0.568	2e-77
Q5EA37	400	Coiled-coil domain-contai	yes	N/A	0.902	0.58	0.572	2e-77
Q6DJK9	384	Coiled-coil domain-contai	N/A	N/A	0.918	0.614	0.579	4e-77
Q66I85	390	Coiled-coil domain-contai	yes	N/A	0.906	0.597	0.570	2e-76
Q9D516	385	Coiled-coil domain-contai	yes	N/A	0.898	0.6	0.566	4e-76
Q32PZ9	385	Coiled-coil domain-contai	yes	N/A	0.898	0.6	0.566	8e-76
Q09651	369	Coiled-coil domain-contai	yes	N/A	0.891	0.620	0.5	3e-63
Q54TR4	325	Coiled-coil domain-contai	yes	N/A	0.856	0.676	0.400	6e-49
O60141	299	Protein saf4 OS=Schizosac	yes	N/A	0.680	0.585	0.344	8e-30

>sp|Q7K0F0|CC130_DROME Coiled-coil domain-containing protein 130 homolog OS=Drosophila melanogaster GN=CG15084 PE=2 SV=1

 Score =  350 bits (897), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 158/234 (67%), Positives = 189/234 (80%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG NKYYPPDYDP  GGLNKF GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK KVGMYY+TPV++FRMKCHLCD+HFEI+TDPGNLDYVI+SGARRQENR
Sbjct: 61  HIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+PL+NEQ+VPETKEV ++LFDD MYKLEH   D  +       L KL++R  SVW + +
Sbjct: 121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVLQKLVERNMSVWDDSY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ 234
            AN  LR  FR++KK++   Q+ D  LL+KSSL + L+PE   D  +A+L K Q
Sbjct: 181 MANSRLRAEFRQQKKEINGQQELDRQLLAKSSLDIALLPETTQDREMAALMKLQ 234

Drosophila melanogaster (taxid: 7227)

>sp|P13994|CC130_HUMAN Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2

 Score =  288 bits (738), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 133/234 (56%), Positives = 178/234 (76%), Gaps = 2/234 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct: 1   MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  +NEQ++    E  +KL  D M++LEHG  D S+ K     L+ + + Q S WK+D
Sbjct: 121 RWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKY 233
           F  N +LR  FR+KKK ++  +++D AL +K+SL++ LVPE ++D +LA+L K+
Sbjct: 180 FALNSMLRRRFREKKKAIQEEEERDQALQAKASLTIPLVPETEDDRKLAALLKF 233

Homo sapiens (taxid: 9606)

>sp|Q5EA37|CC130_BOVIN Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1

 Score =  288 bits (738), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 134/234 (57%), Positives = 178/234 (76%), Gaps = 2/234 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct: 1   MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  +NEQ++    E  +KL  D M++LEHG  D S+ K     L+ + + Q S WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKQKLEMDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKY 233
           F  N +LR  FR+KKK ++  +++D AL +K+SL++ LVPE ++D RLA+L K+
Sbjct: 180 FALNSMLRKRFREKKKAMQEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF 233

Bos taurus (taxid: 9913)

>sp|Q6DJK9|CC130_XENLA Coiled-coil domain-containing protein 130 OS=Xenopus laevis GN=ccdc130 PE=2 SV=1

 Score =  287 bits (735), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 138/238 (57%), Positives = 184/238 (77%), Gaps = 2/238 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKGTNKYYPPD+DP+  G LN +  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct: 1   MGERKGTNKYYPPDFDPAKHGSLNGYRNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP + DYVIVSGA+R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPASCDYVIVSGAQRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  +NEQI+    E  ++L  D M++LEHG  D +  +  A  L++L + Q S WK+D
Sbjct: 121 RWDMQDNEQILTTEHEQKQRLETDSMFRLEHGVQDKAKLQRAAPSLSELQEVQ-SAWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK 237
           F  N +LR  FR++KKQ+K  +++D ALL+K+SL LKLVPE + D ++A+L KY+ ++
Sbjct: 180 FAINSLLRSKFREEKKQIKEEEERDQALLTKASLDLKLVPEVEEDKKIAALLKYRSLE 237

Xenopus laevis (taxid: 8355)

>sp|Q66I85|CC130_DANRE Coiled-coil domain-containing protein 130 homolog OS=Danio rerio GN=ccdc130 PE=2 SV=1

 Score =  285 bits (730), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 134/235 (57%), Positives = 171/235 (72%), Gaps = 2/235 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG NK+YPPD+DP+  G +N +  TH LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct: 1   MGERKGVNKWYPPDFDPAKHGSINGYYKTHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP   DYVIVSGA+R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPATCDYVIVSGAQRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  ENEQI+   +    KL  D MYKL+HG  D    ++    LN+L + Q S WK+D
Sbjct: 121 RWDMAENEQILTTERNEKEKLETDAMYKLDHGGKDKEKLRAAIPSLNELQEHQ-SGWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ 234
           F  N  LR  FR +KK +   ++KDNA+  ++ LS+ LVPE + D +LASL  +Q
Sbjct: 180 FQLNSALRRKFRTEKKVIAEEEEKDNAVRLRTGLSIPLVPEREEDKKLASLLTFQ 234

Danio rerio (taxid: 7955)

>sp|Q9D516|CC130_MOUSE Coiled-coil domain-containing protein 130 OS=Mus musculus GN=Ccdc130 PE=2 SV=1

 Score =  284 bits (727), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 132/233 (56%), Positives = 175/233 (75%), Gaps = 2/233 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI++IRFE+PYNIWC+GC 
Sbjct: 1   MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILVIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  +NEQ++    E   KL  D M++LEHG  D S+ K     L+ + + Q + WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-NAWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYK 232
           F  N +LR  FR+KKK ++  ++KD AL +K+SL++ LVPE ++D RLA+L +
Sbjct: 180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKASLAIPLVPESEDDRRLAALLR 232

Mus musculus (taxid: 10090)

>sp|Q32PZ9|CC130_RAT Coiled-coil domain-containing protein 130 OS=Rattus norvegicus GN=Ccdc130 PE=2 SV=1

 Score =  283 bits (724), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 132/233 (56%), Positives = 175/233 (75%), Gaps = 2/233 (0%)

Query: 1   MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct: 1   MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E 
Sbjct: 61  NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           RW+  +NEQ++    E   KL  D M++LEHG  D S+ K     L+ + + Q + WK+D
Sbjct: 121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-NAWKDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYK 232
           F  N +LR  FR+KKK ++  ++KD AL +K++L++ LVPE ++D RLA+L +
Sbjct: 180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKANLAIPLVPESEDDRRLAALLR 232

Rattus norvegicus (taxid: 10116)

>sp|Q09651|CC130_CAEEL Coiled-coil domain-containing protein 130 homolog OS=Caenorhabditis elegans GN=ZK1307.9 PE=1 SV=1

 Score =  241 bits (616), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/232 (50%), Positives = 163/232 (70%), Gaps = 3/232 (1%)

Query: 1   MGERKGTNKYYPPDYD-PSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
           MGERKG N YYPPD++  +   LN + GTHALRERA+K+  GI++IRFE+P+NIWC GC+
Sbjct: 1   MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60

Query: 60  NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
           NH+GMGVRYNAEKKK+GMYY+TP+++FRMKCHLCD+++ I+TDP N DY +V G  RQE 
Sbjct: 61  NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120

Query: 120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
           R++P +  QI    +  ++KL  D M+K EH   D   + ++   ++KL   QE + ++D
Sbjct: 121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERM-RDD 179

Query: 180 FDANRVLRDSFRKKKKQLKALQDKDNALLSKSSL-SLKLVPEHKNDIRLASL 230
           F AN  LR  FR +KK L   + +D  L  K S+ + +L+PE + D R+AS+
Sbjct: 180 FTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASM 231

Caenorhabditis elegans (taxid: 6239)

>sp|Q54TR4|CC130_DICDI Coiled-coil domain-containing protein 130 homolog OS=Dictyostelium discoideum GN=DDB_G0281599 PE=3 SV=1

 Score =  194 bits (492), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 152/242 (62%), Gaps = 22/242 (9%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           M ERK TNKYYPPD+DPS G +N++ G H LR+RARK+  GI+IIRFE+P+++WC GC  
Sbjct: 1   MAERKATNKYYPPDWDPSKGSINQYRGQHHLRDRARKIDQGILIIRFEMPFSVWCLGCEC 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVR+NAEKK V  Y+++ +Y F+MKCH C + FEI+ DP N DY ++SG +++  +
Sbjct: 61  HIGMGVRFNAEKKTVDKYFTSNIYSFKMKCHQCSNQFEIQNDPKNTDYKLISGLKKRIEQ 120

Query: 121 WNPLENEQIVPET------------KEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKL 168
           +NP ++E  +P +               +    +D + KLE+   D+   K +++ L KL
Sbjct: 121 FNPEDSE--LPSSFIIKYDDNNNNNNNNNNNDNNDTLLKLENKKLDIEKGKKESTQLEKL 178

Query: 169 LDRQESVWKNDFDANRVLRDSFRKKKK--QLKALQDKDNALLSKSSLSLKLVPEHKNDIR 226
            +   +   ND+  + ++R SFR+KKK  Q++  + K   ++      + L+ E+++DI 
Sbjct: 179 QEIMTNRTINDYQLSSIMRKSFREKKKEDQIELERQKSKGIM------IPLLKENQDDID 232

Query: 227 LA 228
            A
Sbjct: 233 TA 234

Dictyostelium discoideum (taxid: 44689)

>sp|O60141|CWC16_SCHPO Protein saf4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=saf4 PE=3 SV=2

 Score =  130 bits (328), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 107/183 (58%), Gaps = 8/183 (4%)

Query: 44  IIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDP 103
           +IRFE+P+ +WC  C N I  G R+NA KK++G YY+T ++ F +KCHLC +  ++ TDP
Sbjct: 27  VIRFEMPFPVWCNNCENIIQQGTRFNAVKKEIGSYYTTKIWSFSLKCHLCSNPIDVHTDP 86

Query: 104 GNLDYVIVSGARRQENRWNPLENEQI--VPETKEVSRKLFDDPMYKLEHGTNDMSSSKSK 161
            N +Y++ SG RR+      +E + I   P   E   K+  D +  LE       S K  
Sbjct: 87  KNTEYIVASGGRRK------IEPQDINERPAKAENDEKVPSDAIEALETQLTQQKSEKHN 140

Query: 162 ASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEH 221
           +S +N + ++ E +W + F +++ LR  FR++KK  K  + KD +L ++++L + ++P  
Sbjct: 141 SSVINFIYEKNERLWSDPFVSSQRLRKQFRERKKIEKKQEAKDLSLKNRAALDIDILPPS 200

Query: 222 KND 224
            +D
Sbjct: 201 SSD 203

May be involved in mRNA splicing.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
357627490	348	hypothetical protein KGM_05853 [Danaus p	0.980	0.724	0.671	1e-102
158297353	326	AGAP007890-PA [Anopheles gambiae str. PE	0.922	0.726	0.708	1e-101
157106646	330	hypothetical protein AaeL_AAEL014712 [Ae	0.922	0.718	0.700	1e-100
383865767	311	PREDICTED: coiled-coil domain-containing	0.996	0.823	0.680	1e-100
157105438	330	hypothetical protein AaeL_AAEL014495 [Ae	0.922	0.718	0.700	1e-100
66549010	312	PREDICTED: coiled-coil domain-containing	0.910	0.75	0.717	1e-100
242009112	310	conserved hypothetical protein [Pediculu	0.984	0.816	0.650	1e-100
170036533	329	coiled-coil domain-containing protein 13	0.980	0.765	0.645	1e-100
380020983	312	PREDICTED: coiled-coil domain-containing	0.910	0.75	0.713	2e-99
195120730	409	GI19358 [Drosophila mojavensis] gi|19390	0.910	0.572	0.679	7e-99

>gi|357627490|gb|EHJ77169.1| hypothetical protein KGM_05853 [Danaus plexippus]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/262 (67%), Positives = 209/262 (79%), Gaps = 10/262 (3%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG N YYPPDYDP VGGLNKF+GTHALRERARKLHMGI+IIRFE+PYNIWCEGCNN
Sbjct: 1   MGERKGQNLYYPPDYDPKVGGLNKFMGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK K+GMYYSTPVYQFRMKCHLCD+HFEIKTDPGNLDYVIVSGARRQENR
Sbjct: 61  HIGMGVRYNAEKTKIGMYYSTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P EN QIVPETKE  ++LFDD M++LEH T DM SSK +   L +L+ R ESVWK+D+
Sbjct: 121 WDPTENGQIVPETKETQKRLFDDAMFRLEHKTGDMDSSKLEKPRLGRLVGRNESVWKDDY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ------ 234
           +AN  LR +FRK++K+L+A    DN LL++SSL +KL+PE ++D  +A+L   +      
Sbjct: 181 EANCSLRRNFRKRRKELEASAVNDNLLLARSSLDIKLLPESEDDRNMAALLSLRPSRSIE 240

Query: 235 ----HVKPKLNVKLKAPSSSGV 252
                 + K+      PSSSG+
Sbjct: 241 ESQSETRTKILNTPALPSSSGL 262

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297353|ref|XP_555619.3| AGAP007890-PA [Anopheles gambiae str. PEST] gi|157015155|gb|EAL39711.3| AGAP007890-PA [Anopheles gambiae str. PEST]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 168/237 (70%), Positives = 196/237 (82%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG N YYPPDYDP  GGLNK+ GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNLYYPPDYDPKAGGLNKWQGTHALRERARKIHLGILIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCD+HFEIKTDP NLDY IVSGARRQENR
Sbjct: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDNHFEIKTDPQNLDYEIVSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P +NEQIVPETKEV RKLFDD MYKLEHG  D  +++     L +L  R +SVW++DF
Sbjct: 121 WDPTQNEQIVPETKEVQRKLFDDAMYKLEHGAKDTQAAEEAKPVLGRLFQRNDSVWRDDF 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK 237
           +AN  LR  FR +KK+LK  ++KDNALL++SSL++ L+PE  ND R+A L +    K
Sbjct: 181 EANSRLRAQFRTRKKELKLQEEKDNALLARSSLAVALLPESDNDRRMAQLMRLHSSK 237

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106646|ref|XP_001649419.1| hypothetical protein AaeL_AAEL014712 [Aedes aegypti] gi|108868810|gb|EAT33035.1| AAEL014712-PA [Aedes aegypti] gi|122937773|gb|ABM68610.1| AAEL014712-PA [Aedes aegypti]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/237 (70%), Positives = 193/237 (81%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG N YYPPDYDP VG LNK+ GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNHYYPPDYDPKVGSLNKWHGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK K+GMYYSTPVYQFRMKCHLCD+HFEIKTDP NLDYVIV+GARRQENR
Sbjct: 61  HIGMGVRYNAEKTKIGMYYSTPVYQFRMKCHLCDNHFEIKTDPANLDYVIVTGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P +NEQIVPETKEV +KLFDDPMYKLEHG  D+ +++     L KL +R  SVW++DF
Sbjct: 121 WDPTQNEQIVPETKEVQKKLFDDPMYKLEHGAKDIQTAEDAKPLLGKLYERNSSVWRDDF 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK 237
           +AN  LR  FR  KKQ+K   DKD ALL+KS L + L+PE   D R+A+L +    K
Sbjct: 181 EANSRLRAEFRSTKKQIKQRDDKDKALLAKSGLDISLLPESDADRRMAALMRLHSAK 237

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865767|ref|XP_003708344.1| PREDICTED: coiled-coil domain-containing protein 130 homolog [Megachile rotundata]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/257 (68%), Positives = 204/257 (79%), Gaps = 1/257 (0%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKGTN YYPPDYDP VGGLNKFLGTHALRERARKLHMGI+IIRFE+PYNIWCEGC N
Sbjct: 1   MGERKGTNLYYPPDYDPRVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCGN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEKKK+GMYYSTP+YQFRMKCHLCD+HFEIKTDP NLDY+IVSGARRQENR
Sbjct: 61  HIGMGVRYNAEKKKIGMYYSTPLYQFRMKCHLCDNHFEIKTDPANLDYIIVSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P ENEQ+VPETKEVS +L+DD MYKLEHG  D   +KS+ S L   L   ++ WK+D+
Sbjct: 121 WDPKENEQVVPETKEVSCRLYDDAMYKLEHGIEDKKVAKSRDSSLEGALALNDATWKDDY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKY-QHVKPK 239
            +N  LR +FR KKK+L+  Q  D  LL KS L++ LV EH++DI+LA L  + +  K  
Sbjct: 181 SSNCALRSAFRTKKKELQNRQGTDQMLLKKSGLNIDLVNEHEDDIKLAKLLMHKKETKKT 240

Query: 240 LNVKLKAPSSSGVSRDQ 256
            N  LK   S   S+D+
Sbjct: 241 GNTSLKRLVSIVRSKDK 257

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157105438|ref|XP_001648870.1| hypothetical protein AaeL_AAEL014495 [Aedes aegypti] gi|108869024|gb|EAT33249.1| AAEL014495-PA [Aedes aegypti]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/237 (70%), Positives = 193/237 (81%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG N YYPPDYDP VG LNK+ GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNHYYPPDYDPKVGSLNKWHGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK K+GMYYSTPVYQFRMKCHLCD+HFEIKTDP NLDYVIV+GARRQENR
Sbjct: 61  HIGMGVRYNAEKTKIGMYYSTPVYQFRMKCHLCDNHFEIKTDPANLDYVIVTGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P +NEQIVPETKEV +KLFDDPMYKLEHG  D+ +++     L KL +R  SVW++DF
Sbjct: 121 WDPTQNEQIVPETKEVQKKLFDDPMYKLEHGAKDIQTAEDAKPLLGKLYERNSSVWRDDF 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK 237
           +AN  LR  FR  KKQ+K   DKD ALL+KS L + L+PE   D R+A+L +    K
Sbjct: 181 EANCRLRAEFRNTKKQIKQRDDKDKALLAKSGLDISLLPESDADRRMAALMRLHSAK 237

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66549010|ref|XP_623589.1| PREDICTED: coiled-coil domain-containing protein 130 homolog [Apis mellifera]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/234 (71%), Positives = 195/234 (83%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKGTN YYPPDYDP VGGLNKFLGTHALRERARKLHMGI+I+RFE+PYNIWC+GCNN
Sbjct: 1   MGERKGTNLYYPPDYDPRVGGLNKFLGTHALRERARKLHMGILIVRFEMPYNIWCDGCNN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEKKK+GMYYSTP+YQFRMKCHLCD+HFEIKTDP NLDYVIVSGARRQENR
Sbjct: 61  HIGMGVRYNAEKKKIGMYYSTPLYQFRMKCHLCDNHFEIKTDPANLDYVIVSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P ENEQIVPETKEVS +L+DD MYKLEHG  D   +KS+ S L   +   ++ WK+D+
Sbjct: 121 WDPKENEQIVPETKEVSCRLYDDAMYKLEHGIEDKKIAKSRDSSLESAIALNDATWKDDY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ 234
            +N  LR +FR +KK+L+  Q  D  LL KS L++ LV EH+ DI+LA L  Y+
Sbjct: 181 TSNCALRTAFRTRKKELQKKQSLDQILLKKSGLNIDLVNEHEEDIKLAKLLMYK 234

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009112|ref|XP_002425336.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509121|gb|EEB12598.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/263 (65%), Positives = 208/263 (79%), Gaps = 10/263 (3%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKGTN YYPPDYDP  GG+NKF GTHALRERARKLHMGI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGTNLYYPPDYDPKKGGINKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCGN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEKKK+GMYY+TP+YQFRMKCHLCD+HFEIKTDPGNLDYVIVSGARRQE+R
Sbjct: 61  HIGMGVRYNAEKKKIGMYYTTPIYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQESR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P +NEQ+VPE KE S+KLFDD M+KLEH + D S+SK +   LNKLL R + VWK+DF
Sbjct: 121 WDPTQNEQVVPEDKETSKKLFDDAMFKLEHTSKDESTSKKQNPVLNKLLQRNDDVWKDDF 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLY--------- 231
            AN  LR SFR  K++ +A + +   ++ K+SLS+ L+PEH +D++LASL          
Sbjct: 181 LANSALRRSFRAFKRKKEAEEAQSRQIIKKNSLSIDLLPEHPDDVKLASLLSLKPSQDIS 240

Query: 232 -KYQHVKPKLNVKLKAPSSSGVS 253
            K +  +  + +K   PSS+G S
Sbjct: 241 EKLEETRKNIMMKPALPSSTGRS 263

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036533|ref|XP_001846118.1| coiled-coil domain-containing protein 130 [Culex quinquefasciatus] gi|167879186|gb|EDS42569.1| coiled-coil domain-containing protein 130 [Culex quinquefasciatus]

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/262 (64%), Positives = 201/262 (76%), Gaps = 10/262 (3%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG N YYPPDYDP VG LNK+ GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNHYYPPDYDPKVGSLNKWQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK KVGMYYSTP+YQFRMKCHLCD+HFEIKTDP NLDYVIV+GARRQENR
Sbjct: 61  HIGMGVRYNAEKTKVGMYYSTPIYQFRMKCHLCDNHFEIKTDPANLDYVIVTGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P +NEQIVPETKEV +KLFDDPMYKLEHG  D  +++     L +L  R   VW++DF
Sbjct: 121 WDPTQNEQIVPETKEVQKKLFDDPMYKLEHGAKDTKAAEDAKPVLGQLYQRNSGVWRDDF 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVK--- 237
           +AN  LR  FR  KKQ+K   +KD ALL+KSSL + L+PE ++D ++ASL +    K   
Sbjct: 181 EANSRLRAEFRASKKQIKQQDEKDKALLAKSSLDISLLPESESDRKMASLMRLHSAKSIA 240

Query: 238 -------PKLNVKLKAPSSSGV 252
                    +  +   PS+SGV
Sbjct: 241 ERDREKRSTILTRPALPSTSGV 262

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020983|ref|XP_003694354.1| PREDICTED: coiled-coil domain-containing protein 130 homolog [Apis florea]

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 167/234 (71%), Positives = 195/234 (83%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKGTN YYPPDYDP VGGLNKFLGTHALRERARKLHMGI+I+RFE+PYNIWC+GCNN
Sbjct: 1   MGERKGTNLYYPPDYDPRVGGLNKFLGTHALRERARKLHMGILIVRFEMPYNIWCDGCNN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEKKK+GMYYSTP+YQFRMKCHLCD+HFEIKTDP NLDYVIV+GARRQENR
Sbjct: 61  HIGMGVRYNAEKKKIGMYYSTPLYQFRMKCHLCDNHFEIKTDPANLDYVIVNGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+P ENEQIVPETKEVS +L+DD MYKLEHG  D   +KS+ S L   +   ++ WK+D+
Sbjct: 121 WDPKENEQIVPETKEVSCRLYDDAMYKLEHGIEDKKIAKSRDSSLESAIALNDATWKDDY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ 234
            +N  LR +FR +KK+L+  Q  D  LL KS L++ LV EH+ DI+LA L  Y+
Sbjct: 181 TSNCALRTAFRTRKKELQKKQSLDQILLKKSGLNIDLVNEHEEDIKLAKLLMYK 234

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195120730|ref|XP_002004874.1| GI19358 [Drosophila mojavensis] gi|193909942|gb|EDW08809.1| GI19358 [Drosophila mojavensis]

 Score =  365 bits (938), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 159/234 (67%), Positives = 197/234 (84%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERKG NKYYPPDYDP  GGLNKF GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct: 1   MGERKGQNKYYPPDYDPKKGGLNKFRGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query: 61  HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
           HIGMGVRYNAEK KVGMYY+TP+Y+FRMKCHLCD+HFEI+TDPGNLDYVI+SGARRQENR
Sbjct: 61  HIGMGVRYNAEKTKVGMYYTTPIYKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120

Query: 121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
           W+PL+NEQ+VPETKEV ++LFDD MYKLEH   D+ ++ +    L K+++R +SVW +++
Sbjct: 121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDVQAAVNAKPMLQKIVERNQSVWDDNY 180

Query: 181 DANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQ 234
            AN  LR +FR++KK+LK  Q+ D  LL+KSSL + L+PE + D  +A+L K Q
Sbjct: 181 VANYKLRATFREQKKELKGQQEIDRQLLAKSSLDIALLPETQQDRDMAALMKLQ 234

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
FB|FBgn0034402	316	CG15084 [Drosophila melanogast	0.910	0.740	0.628	2.2e-80
UNIPROTKB|F1SD79	398	CCDC130 "Uncharacterized prote	0.980	0.633	0.509	5.8e-66
UNIPROTKB|Q5EA37	400	CCDC130 "Coiled-coil domain-co	0.980	0.63	0.509	2e-65
UNIPROTKB|P13994	396	CCDC130 "Coiled-coil domain-co	0.980	0.636	0.505	2e-65
MGI|MGI:1914986	385	Ccdc130 "coiled-coil domain co	0.898	0.6	0.523	1.6e-63
RGD|1307598	385	Ccdc130 "coiled-coil domain co	0.898	0.6	0.527	1.6e-63
WB|WBGene00014250	369	ZK1307.9 [Caenorhabditis elega	0.918	0.639	0.462	4.8e-55
UNIPROTKB|Q09651	369	ZK1307.9 "Coiled-coil domain-c	0.918	0.639	0.462	4.8e-55
DICTYBASE|DDB_G0281599	325	ccdc130 "coiled-coil domain-co	0.743	0.587	0.432	2.4e-44
TAIR|locus:2824443	310	AT1G25682 "AT1G25682" [Arabido	0.875	0.725	0.378	1.4e-39

FB|FBgn0034402 CG15084 [Drosophila melanogaster (taxid:7227)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 147/234 (62%), Positives = 171/234 (73%)

Query:     1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
             MGERKG NKYYPPDYDP  GGLNKF GTHALRERARK+H+GI+IIRFE+PYNIWC+GC N
Sbjct:     1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60

Query:    61 HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
             HIGMGVRYNAEK KVGMYY+TPV++FRMKCHLCD+HFEI+TDPGNLDYVI+SGARRQENR
Sbjct:    61 HIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120

Query:   121 WNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDF 180
             W+PL+NEQ+VPETKEV ++LFDD MYKLEH   D  +       L KL++R  SVW + +
Sbjct:   121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVLQKLVERNMSVWDDSY 180

Query:   181 DANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQ 234
              AN  LR  FR                          +PE   D  +A+L K Q
Sbjct:   181 MANSRLRAEFRQQKKEINGQQELDRQLLAKSSLDIALLPETTQDREMAALMKLQ 234

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1SD79 CCDC130 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 130/255 (50%), Positives = 166/255 (65%)

Query:     1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct:     1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E 
Sbjct:    61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             RW+  +NEQ++    E  +KL  D MY+LEHG  D S+ K     L+ + + Q + WK+D
Sbjct:   121 RWDMADNEQVLTTEHEKKQKLETDAMYRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
             F  N +LR  FR              A           VPE ++D RLA+L K+ H    
Sbjct:   180 FALNSMLRKRFREKKKAMLEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF-HTLDS 238

Query:   240 LNVKLKAPSSSGVSR 254
                K K   +  +SR
Sbjct:   239 YEDKQKLKRTEIISR 253

GO:0009615 "response to virus" evidence=IEA

UNIPROTKB|Q5EA37 CCDC130 "Coiled-coil domain-containing protein 130" [Bos taurus (taxid:9913)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 130/255 (50%), Positives = 166/255 (65%)

Query:     1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct:     1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E 
Sbjct:    61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             RW+  +NEQ++    E  +KL  D M++LEHG  D S+ K     L+ + + Q S WK+D
Sbjct:   121 RWDMEDNEQVLTTEHEKKQKLEMDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
             F  N +LR  FR              A           VPE ++D RLA+L K+ H    
Sbjct:   180 FALNSMLRKRFREKKKAMQEEEERDQALQAKASLAIPLVPETEDDRRLAALLKF-HTLDS 238

Query:   240 LNVKLKAPSSSGVSR 254
                K K   +  +SR
Sbjct:   239 YEDKQKLKRTEIISR 253

GO:0009615 "response to virus" evidence=IEA

UNIPROTKB|P13994 CCDC130 "Coiled-coil domain-containing protein 130" [Homo sapiens (taxid:9606)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 129/255 (50%), Positives = 166/255 (65%)

Query:     1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct:     1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA+R+E 
Sbjct:    61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             RW+  +NEQ++    E  +KL  D M++LEHG  D S+ K     L+ + + Q S WK+D
Sbjct:   121 RWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQ-SAWKDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQHVKPK 239
             F  N +LR  FR              A           VPE ++D +LA+L K+ H    
Sbjct:   180 FALNSMLRRRFREKKKAIQEEEERDQALQAKASLTIPLVPETEDDRKLAALLKF-HTLDS 238

Query:   240 LNVKLKAPSSSGVSR 254
                K K   +  +SR
Sbjct:   239 YEDKQKLKRTEIISR 253

GO:0009615 "response to virus" evidence=IEP

GO:0005575 "cellular_component" evidence=ND

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1914986 Ccdc130 "coiled-coil domain containing 130" [Mus musculus (taxid:10090)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 122/233 (52%), Positives = 156/233 (66%)

Query:     1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI++IRFE+PYNIWC+GC 
Sbjct:     1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILVIRFEMPYNIWCDGCK 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E 
Sbjct:    61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             RW+  +NEQ++    E   KL  D M++LEHG  D S+ K     L+ + + Q + WK+D
Sbjct:   121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYK 232
             F  N +LR  FR              A           VPE ++D RLA+L +
Sbjct:   180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKASLAIPLVPESEDDRRLAALLR 232

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1307598 Ccdc130 "coiled-coil domain containing 130" [Rattus norvegicus (taxid:10116)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 123/233 (52%), Positives = 156/233 (66%)

Query:     1 MGERKGTNKYYPPDYDPSV-GGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG NKYYPPD++P   G LN++  +H LRERARKL  GI+IIRFE+PYNIWC+GC 
Sbjct:     1 MGERKGQNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NHIGMGVRYNAEKKKVG YY+TP+Y+FRMKCHLC ++ E++TDP N DYVIVSGA R+E 
Sbjct:    61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGASRKEE 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             RW+  +NEQ++    E   KL  D M++LEHG  D S+ K     L+ + + Q + WK+D
Sbjct:   121 RWDMEDNEQVLTTEHEKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQEAQNA-WKDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYK 232
             F  N +LR  FR              A           VPE ++D RLA+L +
Sbjct:   180 FALNSMLRRHFREKKKAMQEEEEKDQALQAKANLAIPLVPESEDDRRLAALLR 232

GO:0009615 "response to virus" evidence=IEA;ISO

WB|WBGene00014250 ZK1307.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 111/240 (46%), Positives = 153/240 (63%)

Query:     1 MGERKGTNKYYPPDYDPSVG-GLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG N YYPPD++      LN + GTHALRERA+K+  GI++IRFE+P+NIWC GC+
Sbjct:     1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NH+GMGVRYNAEKKK+GMYY+TP+++FRMKCHLCD+++ I+TDP N DY +V G  RQE 
Sbjct:    61 NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             R++P +  QI    +  ++KL  D M+K EH   D   + ++   ++KL   QE + ++D
Sbjct:   121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERM-RDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXX-XNAXXXXXXXXXXXVPEHKNDIRLASLY-KYQHVK 237
             F AN  LR  FR              N            +PE + D R+AS+  +Y+  K
Sbjct:   180 FTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASMMTRYRDTK 239

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

UNIPROTKB|Q09651 ZK1307.9 "Coiled-coil domain-containing protein 130 homolog" [Caenorhabditis elegans (taxid:6239)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 111/240 (46%), Positives = 153/240 (63%)

Query:     1 MGERKGTNKYYPPDYDPSVG-GLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCN 59
             MGERKG N YYPPD++      LN + GTHALRERA+K+  GI++IRFE+P+NIWC GC+
Sbjct:     1 MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60

Query:    60 NHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQEN 119
             NH+GMGVRYNAEKKK+GMYY+TP+++FRMKCHLCD+++ I+TDP N DY +V G  RQE 
Sbjct:    61 NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120

Query:   120 RWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKND 179
             R++P +  QI    +  ++KL  D M+K EH   D   + ++   ++KL   QE + ++D
Sbjct:   121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERM-RDD 179

Query:   180 FDANRVLRDSFRXXXXXXXXXXXX-XNAXXXXXXXXXXXVPEHKNDIRLASLY-KYQHVK 237
             F AN  LR  FR              N            +PE + D R+AS+  +Y+  K
Sbjct:   180 FTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASMMTRYRDTK 239

GO:0005515 "protein binding" evidence=IPI

DICTYBASE|DDB_G0281599 ccdc130 "coiled-coil domain-containing protein 130" [Dictyostelium discoideum (taxid:44689)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 87/201 (43%), Positives = 130/201 (64%)

Query:     1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
             M ERK TNKYYPPD+DPS G +N++ G H LR+RARK+  GI+IIRFE+P+++WC GC  
Sbjct:     1 MAERKATNKYYPPDWDPSKGSINQYRGQHHLRDRARKIDQGILIIRFEMPFSVWCLGCEC 60

Query:    61 HIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENR 120
             HIGMGVR+NAEKK V  Y+++ +Y F+MKCH C + FEI+ DP N DY ++SG +++  +
Sbjct:    61 HIGMGVRFNAEKKTVDKYFTSNIYSFKMKCHQCSNQFEIQNDPKNTDYKLISGLKKRIEQ 120

Query:   121 WNPLENEQ----IVP------ETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLD 170
             +NP ++E     I+            +    +D + KLE+   D+   K +++ L KL +
Sbjct:   121 FNPEDSELPSSFIIKYDDNNNNNNNNNNNDNNDTLLKLENKKLDIEKGKKESTQLEKLQE 180

Query:   171 RQESVWKNDFDANRVLRDSFR 191
                +   ND+  + ++R SFR
Sbjct:   181 IMTNRTINDYQLSSIMRKSFR 201

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2824443 AT1G25682 "AT1G25682" [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 87/230 (37%), Positives = 126/230 (54%)

Query:     5 KGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGM 64
             +  N YYPP++ P  G LNKF G H LRERA+K+  GI++IRFE+PYNIWC GC++ I  
Sbjct:     8 RADNFYYPPEWTPDQGSLNKFQGQHPLRERAKKIGEGILVIRFEMPYNIWCGGCSSMIAK 67

Query:    65 GVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPL 124
             GVR+NAEKK+VG YYST ++ F MK   C     I+TDP N +YVI SGA+++   +   
Sbjct:    68 GVRFNAEKKQVGNYYSTKIWSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKKVEEYEA- 126

Query:   125 ENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDANR 184
             E+ + +  T E  +    DP Y+LEH   D+   K+    L +L    ++   +D+  N+
Sbjct:   127 EDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKAAEPLLVRLQRVSDARHADDYSLNK 186

Query:   185 VLRDSFRXXXXXXXXXXXXXNAXXXXXXXXXXXVPEHKNDIRLASLYKYQ 234
              LR   R                          +P+ + DI+ AS  K++
Sbjct:   187 ALRAQLRRHRKRVAEEETASRKLGLGIRL----LPKSEEDIKAASNVKFK 232

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q09651	CC130_CAEEL	No assigned EC number	0.5	0.8910	0.6205	yes	N/A
Q32PZ9	CC130_RAT	No assigned EC number	0.5665	0.8988	0.6	yes	N/A
Q66I85	CC130_DANRE	No assigned EC number	0.5702	0.9066	0.5974	yes	N/A
Q5EA37	CC130_BOVIN	No assigned EC number	0.5726	0.9027	0.58	yes	N/A
Q7K0F0	CC130_DROME	No assigned EC number	0.6752	0.9105	0.7405	yes	N/A
Q9D516	CC130_MOUSE	No assigned EC number	0.5665	0.8988	0.6	yes	N/A
Q54TR4	CC130_DICDI	No assigned EC number	0.4008	0.8560	0.6769	yes	N/A
P13994	CC130_HUMAN	No assigned EC number	0.5683	0.9027	0.5858	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	257
pfam04502	321	pfam04502, DUF572, Family of unknown function (DUF	2e-70
COG5134	272	COG5134, COG5134, Uncharacterized conserved protei	1e-24

>gnl|CDD|218115 pfam04502, DUF572, Family of unknown function (DUF572)

 Score =  218 bits (557), Expect = 2e-70
 Identities = 87/255 (34%), Positives = 126/255 (49%), Gaps = 21/255 (8%)

Query: 1   MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNN 60
           MGERK  NKYYPPD+DPS             R+R +    G +++RF  P+N+ C+ C  
Sbjct: 1   MGERKVLNKYYPPDFDPS---------KIPRRKRPKN---GQLVVRFMAPFNMRCDTCGE 48

Query: 61  HIGMGVRYNAEKKKVGM--YYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQE 118
           +I  G ++NA K+KVG   Y  TP+++F +KC  C +    KTDP N DYV+ SGA R  
Sbjct: 49  YIYKGTKFNARKEKVGNETYLGTPIFRFYIKCTKCLNEITFKTDPKNTDYVVESGATRNY 108

Query: 119 NRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKN 178
              + L+ EQ     KE   +L  D M KLE+ T D          L +L + Q    + 
Sbjct: 109 -EADKLDEEQEERVEKEREEELAGDAMKKLENRTADSKREMEVLERLEELKELQSR--RA 165

Query: 179 DFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHVKP 238
           D D N +L   FR++KK+ +  +++D AL+     SL   PE + D R A     +  + 
Sbjct: 166 DVDVNSMLEALFRREKKEEEEEEEEDEALIK----SLSFGPETEEDRRRADDEDSEDDEE 221

Query: 239 KLNVKLKAPSSSGVS 253
             +      S S   
Sbjct: 222 DNDNTPSPKSGSSSP 236

Family of eukaryotic proteins with undetermined function. Length = 321

>gnl|CDD|227463 COG5134, COG5134, Uncharacterized conserved protein [Function unknown]

 Score = 98.6 bits (245), Expect = 1e-24
 Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 15/218 (6%)

Query: 8   NKYYPPDYDPSVGGLNKFLGTHALRERARKL---HMGIMIIRFELPYNIWCEGCNNHIGM 64
            KY PP+        N+ L     + +  KL       + IR E P+ + C  C N+I  
Sbjct: 2   GKYIPPEG-------NRVLAQPLAKRKFDKLKNARPRGLSIRLETPFPVRCLNCENYIQK 54

Query: 65  GVRYNAEKKKVGM--YYSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWN 122
           G R+NA K+++G   YY+T +Y+F +KCHLC +  +++TDP N +YV+ SG RR+    +
Sbjct: 55  GTRFNAVKEEIGDKSYYTTKIYRFSIKCHLCSNPIDVRTDPKNTEYVVESGGRRKIEPQD 114

Query: 123 PLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKSKASHLNKLLDRQESVWKNDFDA 182
             E+       ++V      + + K         S K  +S +N + +  + +W + F +
Sbjct: 115 INEDPAKAENVEKVPESDAIEALEKQLTQQ---KSEKHNSSAINFIDELNKRLWSDPFVS 171

Query: 183 NRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPE 220
           ++ LR  FR++KK  K  + KD +L ++++L + ++P 
Sbjct: 172 SQRLRKQFRERKKIEKKQEAKDLSLKNRAALDIDILPS 209

Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG2990|consensus	317		100.0
PF04502	324	DUF572: Family of unknown function (DUF572) ; Inte	100.0
KOG2989|consensus	253		100.0
COG5134	272	Uncharacterized conserved protein [Function unknow	100.0
PF05907	161	DUF866: Eukaryotic protein of unknown function (DU	91.58
PF08271	43	TF_Zn_Ribbon: TFIIB zinc-binding; InterPro: IPR013	90.29
PF10122	51	Mu-like_Com: Mu-like prophage protein Com; InterPr	87.56
PRK03681	114	hypA hydrogenase nickel incorporation protein; Val	81.22

>KOG2990|consensus

Probab=100.00  E-value=1.7e-91  Score=634.51  Aligned_cols=250  Identities=51%  Similarity=0.944  Sum_probs=241.4

Q ss_pred             CCcccCCCcccCCCCCCCCCCCccccCchhhHHHHhhhcCCeeEEEEeceeeeecCCCCccccccceeeeeccccccccc
Q psy11026          1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYS   80 (257)
Q Consensus         1 M~ERK~~nkYyPPD~DP~k~~~nk~~~~h~l~~Ra~k~~~g~~~VRfe~Pf~i~C~~C~~~I~kG~rfNA~K~~vg~Y~s   80 (257)
                      |||||+.||||||||+|.++|+|+|||+||||.||||+++||+||||||||||||.+|.+||++||||||+|++||+||+
T Consensus         1 mgerkg~nkYyPPd~~p~~gsln~~~g~h~lrerarKi~~gilvIRFEMPynIWC~gC~nhIgmGvRyNAeKkkvGnYYt   80 (317)
T KOG2990|consen    1 MGERKGQNKYYPPDFNPKHGSLNKYHGTHALRERARKIDQGILVIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYT   80 (317)
T ss_pred             CcccccCCcccCCCCCcccCcccccccchhHHHHHHhhccceEEEEEecccchhhccHHHhhhccceechhhhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEEEEcCCCCceeEEeeCCCCCCeeeccCceecccCCCcccCCcccccchHhhhcCCCCchhhcccccccchhhhH
Q psy11026         81 TPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKS  160 (257)
Q Consensus        81 t~I~~F~~kC~~C~~~i~i~TDPkn~dYv~~~Ga~r~~e~~d~~~~~~~~~~~~e~~~~~~~d~m~~LE~~~~d~~~~~~  160 (257)
                      ||||+|.||||+|.|+|+|+|||+||+|||+|||+|++++||+.+++++.+.++++++++..|||++|||+..|.+..+.
T Consensus        81 Tpiw~FrmKchlC~n~i~iqTDP~NceYvI~SGaqRKeer~D~~d~Eq~~~t~~e~k~KLa~DamyrLEHqe~D~~k~k~  160 (317)
T KOG2990|consen   81 TPIWSFRMKCHLCDNYIVIQTDPKNCEYVITSGAQRKEERYDAEDAEQMEPTAEEEKGKLASDAMYRLEHQEVDLKKKKA  160 (317)
T ss_pred             CcccchhhcccccCCceeeecCCCCceEEEeccccccccccCchhhhhccchhhhhcccccccHHHHHHhHHHhHhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhccCCCCCcCCCChhhHHhhhcccccCc----
Q psy11026        161 KASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYKYQHV----  236 (257)
Q Consensus       161 ~~~~L~eL~~~~~~~~~ddy~~n~~LR~~fR~~kk~~~~~~~~d~al~~~~~l~i~Ll~e~eeD~~~A~~v~f~~~----  236 (257)
                      +.+.|..|++.++++|.|||.+|++||++||++||..+++++.|..|+++.+|+|.|||+|++|+..|.+|+|.+.    
T Consensus       161 aep~l~~l~e~~~~rw~Ddf~~ns~LRaqfR~~kK~~~e~~~~D~~l~~r~sl~I~lLPeTe~Dr~~A~llk~~~~~~ke  240 (317)
T KOG2990|consen  161 AEPVLVRLQEVNDARWADDFQANSRLRAQFREEKKLINEQEARDLDLFARASLDILLLPETEEDRKIASLLKFNTKKRKE  240 (317)
T ss_pred             cchHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHhhhhhhhhHHHHHhhhcCcccCCCchhhHHHHHHHhhcccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999872    


Q ss_pred             ------cccccccCCCCCCC
Q psy11026        237 ------KPKLNVKLKAPSSS  250 (257)
Q Consensus       237 ------~~~~~~~~~~~~~~  250 (257)
                            +..|+++|--++|.
T Consensus       241 dr~~~~r~~i~srp~~~~S~  260 (317)
T KOG2990|consen  241 DRENNRRLEIKSRPSRTGST  260 (317)
T ss_pred             hHHhhhhhhhccCCCCCCCc
Confidence                  46788886655544

>PF04502 DUF572: Family of unknown function (DUF572) ; InterPro: IPR007590 This entry represents eukaryotic proteins with undetermined function belonging to the CWC16 family

Probab=100.00  E-value=8.9e-76  Score=547.15  Aligned_cols=212  Identities=47%  Similarity=0.766  Sum_probs=192.9

Q ss_pred             CCcccCCCcccCCCCCCCCCCCccccCchhhHHHHhhhcCCeeEEEEeceeeeecCCCCccccccceeeeecccccc--c
Q psy11026          1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVGM--Y   78 (257)
Q Consensus         1 M~ERK~~nkYyPPD~DP~k~~~nk~~~~h~l~~Ra~k~~~g~~~VRfe~Pf~i~C~~C~~~I~kG~rfNA~K~~vg~--Y   78 (257)
                      ||||||+||||||||||++         ||+++|++   +|+++|||||||+|||++|++|||+||||||+|++||+  |
T Consensus         1 M~ERK~~nkYyPPD~d~~k---------~~~~kr~k---~~~~~VRf~~Pf~i~C~~C~~~I~kG~rFNA~Ke~v~~E~Y   68 (324)
T PF04502_consen    1 MSERKVLNKYYPPDFDPSK---------HPLRKRAK---QGILTVRFMMPFNIWCNTCGEYIYKGVRFNARKEKVGNEKY   68 (324)
T ss_pred             CcccccCCCccCCCCCccc---------ccccccCc---CcceEEEEcCCccCcCCCCccccccceeeeeeeEecCCCcc
Confidence            9999999999999999665         67888877   79999999999999999999999999999999999987  9


Q ss_pred             cceeeEEEEEEcCCCCceeEEeeCCCCCCeeeccCceecccCCCcccCCcccccchHhhhcCCCCchhhcccccccchhh
Q psy11026         79 YSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSS  158 (257)
Q Consensus        79 ~st~I~~F~~kC~~C~~~i~i~TDPkn~dYv~~~Ga~r~~e~~d~~~~~~~~~~~~e~~~~~~~d~m~~LE~~~~d~~~~  158 (257)
                      ||||||+||||||.|+++|+|+|||+|+||||++||+|+++.| ...++++...++++++++..|||++||+++.|++++
T Consensus        69 ls~~I~rF~~kC~~C~~~i~~kTDPkn~dY~~~~Ga~R~~~~~-~~~~~~~~~~~~~~~~~~~~d~m~~LE~~~~d~~~~  147 (324)
T PF04502_consen   69 LSTPIYRFYIKCPRCSNEIEFKTDPKNTDYVVESGARRNFEPD-KEEEEQEEREDKEEEEEEEEDPMKALEKRTEDSKRE  147 (324)
T ss_pred             ccceEEEEEEEcCCCCCEEeeecCCCCCCeeeecCeeecCCcc-hhhhhhhhhhhHHHhhhccCCchHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999966554 444555555556666677899999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhccCCCCCcCCCChhhHHhhhcc
Q psy11026        159 KSKASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLY  231 (257)
Q Consensus       159 ~~~~~~L~eL~~~~~~~~~ddy~~n~~LR~~fR~~kk~~~~~~~~d~al~~~~~l~i~Ll~e~eeD~~~A~~v  231 (257)
                      +++.++|++|+++|.+  .|+|+.|++||+.||.++++++.+++.|+++.++++|.    |++++|..+|..-
T Consensus       148 ~~~~~~LeeL~~~~~r--~d~~~~n~~Lr~~~r~~~k~~~~~~~~d~~~~~~~~~~----~~~~~~~r~~~~~  214 (324)
T PF04502_consen  148 MEALERLEELQELNAR--KDDYDANQMLRKRFREEKKERERQEEEDEALKKKISLG----PESEEDKRLAADE  214 (324)
T ss_pred             HHHHHHHHHHHHHHhc--cCchhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC----cchhhhhhhhcch
Confidence            9999999999999997  89999999999999999999999999999998888775    8888888887774

>KOG2989|consensus

Probab=100.00  E-value=1e-50  Score=361.97  Aligned_cols=193  Identities=30%  Similarity=0.456  Sum_probs=161.7

Q ss_pred             CCcccCCCcccCCCCCCCCCCCccccCchhhHHHHhhhcCCeeEEEEeceeeeecCCCCccccccceeeeecccc-c-cc
Q psy11026          1 MGERKGTNKYYPPDYDPSVGGLNKFLGTHALRERARKLHMGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKV-G-MY   78 (257)
Q Consensus         1 M~ERK~~nkYyPPD~DP~k~~~nk~~~~h~l~~Ra~k~~~g~~~VRfe~Pf~i~C~~C~~~I~kG~rfNA~K~~v-g-~Y   78 (257)
                      |+||||+|+||||||||++++            |++.....++.||+|+||+|+|++||+|||+|++||++++.| | .|
T Consensus         1 m~Erk~lnkyyppdfDP~ki~------------r~k~~k~~q~~~Rlm~Pf~~rC~tCgeyi~kg~kfN~r~E~~~~e~y   68 (253)
T KOG2989|consen    1 MSERKVLNKYYPPDFDPKKIP------------RAKEPKNRQLKIRLMTPFRLRCNTCGEYIYKGKKFNAREEDVIEETY   68 (253)
T ss_pred             CcccccccccCCCCCChhhhh------------hhhccchhhcceeecccceeecccccchhhcCCCcchhHHhhhcccc
Confidence            999999999999999999974            333334456899999999999999999999999999999988 5 69


Q ss_pred             cceeeEEEEEEcCCCCceeEEeeCCCCCCeeeccCceecccCCCcccCCcccccchHhhhcCCCCchhhcccccccchhh
Q psy11026         79 YSTPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSS  158 (257)
Q Consensus        79 ~st~I~~F~~kC~~C~~~i~i~TDPkn~dYv~~~Ga~r~~e~~d~~~~~~~~~~~~e~~~~~~~d~m~~LE~~~~d~~~~  158 (257)
                      |||+||+|||+|+.|+++|+|+|||+|+|||+++||+|+++.|...+.+.-..  .++  ....|+|..||+++.+++.+
T Consensus        69 Lgiki~Rf~i~Ct~cl~el~~rTDp~N~dY~~E~Ga~r~y~~~~~~eeek~k~--~~~--~d~~d~m~~lekrt~~S~~e  144 (253)
T KOG2989|consen   69 LGIKIFRFYIKCTRCLRELSFRTDPKNSDYVIESGATRNYEPIEEEEEEKRKF--EEE--EDMKDEIKRLEKRTFQSKDE  144 (253)
T ss_pred             ccceeeeeeeeccchHhhhhhhcCCcchHHHHHhcchhcccccchhHHHHHHH--Hhh--hhhhhHHHHHHHHhhhhhhH
Confidence            99999999999999999999999999999999999999998876544322111  111  33479999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy11026        159 KSKASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKS  211 (257)
Q Consensus       159 ~~~~~~L~eL~~~~~~~~~ddy~~n~~LR~~fR~~kk~~~~~~~~d~al~~~~  211 (257)
                      +.....|++|...+.+....|+..  .|....+..++..++.++++++|.+..
T Consensus       145 ~~~~~~ldel~~~k~r~~~id~~~--~l~~~~~~~~k~~~~~eee~~~liks~  195 (253)
T KOG2989|consen  145 EIIRRALDELKVLKERPAPIDLVS--ELLATNERPRKYAKRKEEEKKVLIKSI  195 (253)
T ss_pred             HHHHHHHHHHHHHhcccCcccHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999998877777654  466666667777777777777776544

>COG5134 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=7e-41  Score=295.19  Aligned_cols=214  Identities=31%  Similarity=0.568  Sum_probs=165.7

Q ss_pred             CCcccCCCCCCCCCCCccccCchhh-HHHHhhhc---CCeeEEEEeceeeeecCCCCccccccceeeeeccccc--cccc
Q psy11026          7 TNKYYPPDYDPSVGGLNKFLGTHAL-RERARKLH---MGIMIIRFELPYNIWCEGCNNHIGMGVRYNAEKKKVG--MYYS   80 (257)
Q Consensus         7 ~nkYyPPD~DP~k~~~nk~~~~h~l-~~Ra~k~~---~g~~~VRfe~Pf~i~C~~C~~~I~kG~rfNA~K~~vg--~Y~s   80 (257)
                      .|+|||||+.|--.-        || +.++.|++   ..-+.||+|.||+|+|+.|++||++|+||||.|+-++  .|||
T Consensus         1 ~~ky~pp~~NrvlAq--------pL~~~~~~KlK~arprglSiRL~TPF~~RCL~C~~YI~K~~rfNavkE~~~dK~y~~   72 (272)
T COG5134           1 MGKYIPPEGNRVLAQ--------PLAKRKFDKLKNARPRGLSIRLETPFPVRCLNCENYIQKGTRFNAVKEEIGDKSYYT   72 (272)
T ss_pred             CCCCcCCCCchhhcc--------hhHHHHHHHhcccCcccceEEeccCcceeecchhhhhhcccchhHHHHHhcccccce
Confidence            489999999986421        12 33444543   3348999999999999999999999999999999996  4889


Q ss_pred             eeeEEEEEEcCCCCceeEEeeCCCCCCeeeccCceecccCCCcccCCcccccchHhhhcCCCCchhhcccccccchhhhH
Q psy11026         81 TPVYQFRMKCHLCDSHFEIKTDPGNLDYVIVSGARRQENRWNPLENEQIVPETKEVSRKLFDDPMYKLEHGTNDMSSSKS  160 (257)
Q Consensus        81 t~I~~F~~kC~~C~~~i~i~TDPkn~dYv~~~Ga~r~~e~~d~~~~~~~~~~~~e~~~~~~~d~m~~LE~~~~d~~~~~~  160 (257)
                      |.||||+|+||.|++.|.|+|||+|++||+++|++|+.+.-++.+++..  .+ ..+.--..|....+|+...+......
T Consensus        73 ~kiYRf~I~C~~C~n~i~~RTDPkN~~YV~EsGg~R~i~pq~~n~D~~k--~~-~Ve~~~Esd~~~~~eK~~~Q~~~~~~  149 (272)
T COG5134          73 TKIYRFSIKCHLCSNPIDVRTDPKNTEYVVESGGRRKIEPQDINEDPAK--AE-NVEKVPESDAIEALEKQLTQQKSEKH  149 (272)
T ss_pred             eEEEEEEEEccCCCCceeeecCCCCceEEEecCceeecCccccccChhh--hh-hhhcCchhHHHHHHHHHHHHhhcccc
Confidence            9999999999999999999999999999999999998765544332211  00 00111124556677777666555555


Q ss_pred             HHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhccCCCCCcCCCChhhHHhhhccc
Q psy11026        161 KASHLNKLLDRQESVWKNDFDANRVLRDSFRKKKKQLKALQDKDNALLSKSSLSLKLVPEHKNDIRLASLYK  232 (257)
Q Consensus       161 ~~~~L~eL~~~~~~~~~ddy~~n~~LR~~fR~~kk~~~~~~~~d~al~~~~~l~i~Ll~e~eeD~~~A~~v~  232 (257)
                      ...++..+-.++.+.|.++|...+.+|.+||+.|+-+..|++++-.+..+..++++++|.+- |...|.+++
T Consensus       150 ~ssA~n~~D~L~Krl~~~~~~~~~~~~~~~~~~k~~e~~q~a~~~~~~~~a~~~~~i~~~~~-d~~~~~~~~  220 (272)
T COG5134         150 NSSAINFIDELNKRLWSDPFVSSQRLRKQFRERKKIEKKQEAKDLSLKNRAALDIDILPSSS-DKDKALLLL  220 (272)
T ss_pred             hhhhhhHHHHHHHHhhcCchhhhHHHHHHHHHHhhhHHHHHHHHhhhhhhhhhhhccCCccc-hhhHHHHhh
Confidence            55556666667788999999999999999999999998999999999999999999998654 444454444

>PF05907 DUF866: Eukaryotic protein of unknown function (DUF866); InterPro: IPR008584 This family consists of a number of hypothetical eukaryotic proteins of unknown function with an average length of around 165 residues

Probab=91.58  E-value=0.2  Score=43.12  Aligned_cols=63  Identities=29%  Similarity=0.490  Sum_probs=35.6

Q ss_pred             EeceeeeecCCCCccccccceeeee-cccc-ccccceeeEEEEEEcCCCCceeEEeeCCC-CCCeeecc
Q psy11026         47 FELPYNIWCEGCNNHIGMGVRYNAE-KKKV-GMYYSTPVYQFRMKCHLCDSHFEIKTDPG-NLDYVIVS  112 (257)
Q Consensus        47 fe~Pf~i~C~~C~~~I~kG~rfNA~-K~~v-g~Y~st~I~~F~~kC~~C~~~i~i~TDPk-n~dYv~~~  112 (257)
                      |.-.|.|.|..|++--.+.+-+|.. +..+ |   |---=.|.+||..|..+.+|.--|. ...|..+.
T Consensus        25 ~~~~fkvkCt~CgE~~~k~V~i~~~e~~e~~g---srG~aNfv~KCk~C~re~si~i~~~~~~~~~~e~   90 (161)
T PF05907_consen   25 FEWFFKVKCTSCGEVHPKWVYINRFEKHEIPG---SRGTANFVMKCKFCKRESSIDIIPGKGKPYTAED   90 (161)
T ss_dssp             --EEEEEEETTSS--EEEEEEE-TT-BEE-TT---SS-EESEEE--SSSS--EEEEEE--TTTEEEGGG
T ss_pred             CEEEEEEEECCCCCccCcceEeecceEEecCC---CccceEeEecCcCcCCccEEEEEecCcccccccc
Confidence            4577999999999988888888854 3334 3   1112379999999999888855443 45666653

; PDB: 1ZSO_B.

>PF08271 TF_Zn_Ribbon: TFIIB zinc-binding; InterPro: IPR013137 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.29  E-value=0.19  Score=33.74  Aligned_cols=25  Identities=36%  Similarity=0.468  Sum_probs=22.3

Q ss_pred             EEcCCCCceeEEeeCCCCCCeeeccC
Q psy11026         88 MKCHLCDSHFEIKTDPGNLDYVIVSG  113 (257)
Q Consensus        88 ~kC~~C~~~i~i~TDPkn~dYv~~~G  113 (257)
                      |+||.|++.- |-+|+.++++|+..=
T Consensus         1 m~Cp~Cg~~~-~~~D~~~g~~vC~~C   25 (43)
T PF08271_consen    1 MKCPNCGSKE-IVFDPERGELVCPNC   25 (43)
T ss_dssp             ESBTTTSSSE-EEEETTTTEEEETTT
T ss_pred             CCCcCCcCCc-eEEcCCCCeEECCCC
Confidence            7899999987 899999999998873

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a zinc finger motif found in transcription factor IIB (TFIIB). In eukaryotes the initiation of transcription of protein encoding genes by the polymerase II complexe (Pol II) is modulated by general and specific transcription factors. The general transcription factors operate through common promoters elements (such as the TATA box). At least seven different proteins associate to form the general transcription factors: TFIIA, -IIB, -IID, -IIE, -IIF, -IIG, and -IIH []. TFIIB and TFIID are responsible for promoter recognition and interaction with pol II; together with Pol II, they form a minimal initiation complex capable of transcription under certain conditions. The TATA box of a Pol II promoter is bound in the initiation complex by the TBP subunit of TFIID, which bends the DNA around the C-terminal domain of TFIIB whereas the N-terminal zinc finger of TFIIB interacts with Pol II [, ]. The TFIIB zinc finger adopts a zinc ribbon fold characterised by two beta-hairpins forming two structurally similar zinc-binding sub-sites []. The zinc finger contacts the rbp1 subunit of Pol II through its dock domain, a conserved region of about 70 amino acids located close to the polymerase active site []. In the Pol II complex this surface is located near the RNA exit groove. Interestingly this sequence is best conserved in the three polymerases that utilise a TFIIB-like general transcription factor (Pol II, Pol III, and archaeal RNA polymerase) but not in Pol I []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1VD4_A 1PFT_A 3K1F_M 3K7A_M 1RO4_A 1RLY_A 1DL6_A.

>PF10122 Mu-like_Com: Mu-like prophage protein Com; InterPro: IPR019294 Members of this entry belong to the Com family of proteins that act as translational regulators of mom [, ]

Probab=87.56  E-value=0.48  Score=33.76  Aligned_cols=34  Identities=24%  Similarity=0.632  Sum_probs=25.7

Q ss_pred             eeecCCCCccccccceeeeeccccccccceeeEEEEEEcCCCCceeEEe
Q psy11026         52 NIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSHFEIK  100 (257)
Q Consensus        52 ~i~C~~C~~~I~kG~rfNA~K~~vg~Y~st~I~~F~~kC~~C~~~i~i~  100 (257)
                      .|+|.+|+..++++          |.|-     ...||||.|..--.++
T Consensus         4 eiRC~~CnklLa~~----------g~~~-----~leIKCpRC~tiN~~~   37 (51)
T PF10122_consen    4 EIRCGHCNKLLAKA----------GEVI-----ELEIKCPRCKTINHVR   37 (51)
T ss_pred             ceeccchhHHHhhh----------cCcc-----EEEEECCCCCccceEe
Confidence            58999999999984          2222     4579999998766554

>PRK03681 hypA hydrogenase nickel incorporation protein; Validated

Probab=81.22  E-value=0.68  Score=37.57  Aligned_cols=32  Identities=22%  Similarity=0.544  Sum_probs=22.2

Q ss_pred             EeceeeeecCCCCccccccceeeeeccccccccceeeEEEEEEcCCCCce
Q psy11026         47 FELPYNIWCEGCNNHIGMGVRYNAEKKKVGMYYSTPVYQFRMKCHLCDSH   96 (257)
Q Consensus        47 fe~Pf~i~C~~C~~~I~kG~rfNA~K~~vg~Y~st~I~~F~~kC~~C~~~   96 (257)
                      -..|-..||..|+.+...                 +-+ |++.||.|++.
T Consensus        65 ~~~p~~~~C~~Cg~~~~~-----------------~~~-~~~~CP~Cgs~   96 (114)
T PRK03681         65 EEQEAECWCETCQQYVTL-----------------LTQ-RVRRCPQCHGD   96 (114)
T ss_pred             EeeCcEEEcccCCCeeec-----------------CCc-cCCcCcCcCCC
Confidence            478999999999963322                 111 33679999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
1zso_A	164	Hypothetical protein; structural genomics, PSI, pr	90.28
1a7i_A	81	QCRP2 (LIM1); LIM domain containing proteins, meta	82.74

>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1

Probab=90.28  E-value=0.33  Score=40.84  Aligned_cols=70  Identities=9%  Similarity=0.065  Sum_probs=46.6

Q ss_pred             CCeeEEE----EeceeeeecCCCCccccccceeeeecc-cc-ccccceeeEEEEEEcCCCCceeE--EeeCCCCCCeeec
Q psy11026         40 MGIMIIR----FELPYNIWCEGCNNHIGMGVRYNAEKK-KV-GMYYSTPVYQFRMKCHLCDSHFE--IKTDPGNLDYVIV  111 (257)
Q Consensus        40 ~g~~~VR----fe~Pf~i~C~~C~~~I~kG~rfNA~K~-~v-g~Y~st~I~~F~~kC~~C~~~i~--i~TDPkn~dYv~~  111 (257)
                      .|+-.|+    |..-|.|.|..|++.-.+ +-+|..-+ .+ |. =|  -=.|.+||..|..+.+  |...|.-+.|..+
T Consensus        21 enVt~L~p~~~~~~~fkvkC~~C~E~~~k-v~v~~~e~~ei~gs-RG--~aNfv~KCk~C~re~Si~i~~~~~~~~y~~~   96 (164)
T 1zso_A           21 ENVKRLFCDDEYLWIFNIRDSTSSLTRDN-IQFRKTDILEIPNS-RG--TANFMIKWTEYPKYSTINFVNTKNSCSYEEV   96 (164)
T ss_dssp             ESEEEEECCTTCCEEEEEEETTSSCEEEE-EEECTTCBEECTTS-SC--EESEEECCSSSSCCEEEEEECCTTTTEEEGG
T ss_pred             cCcceeecCCCcEEEEEEEECCCCcccCC-EEEcchheeecCCC-Cc--ceeEEEeccccCCcceEEEEeCCCCcccccc
Confidence            5677777    667799999999998877 88887432 23 31 12  2369999999977655  4455421267764


Q ss_pred             cC
Q psy11026        112 SG  113 (257)
Q Consensus       112 ~G  113 (257)
                      ..
T Consensus        97 d~   98 (164)
T 1zso_A           97 NN   98 (164)
T ss_dssp             GT
T ss_pred             cC
Confidence            44

>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A

Probab=82.74  E-value=0.81  Score=32.65  Aligned_cols=38  Identities=13%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             eeecCCCCccccccceeeeeccccc-cccceeeEEEEEEcCCCCceeE
Q psy11026         52 NIWCEGCNNHIGMGVRYNAEKKKVG-MYYSTPVYQFRMKCHLCDSHFE   98 (257)
Q Consensus        52 ~i~C~~C~~~I~kG~rfNA~K~~vg-~Y~st~I~~F~~kC~~C~~~i~   98 (257)
                      .-.|..|+..|+.|....|    .| .|+..     -|+|..|...|.
T Consensus         7 ~~~C~~C~~~I~~~~~~~a----~~~~~H~~-----CF~C~~C~~~L~   45 (81)
T 1a7i_A            7 GNKCGACGRTVYHAEEVQC----DGRSFHRC-----CFLCMVCRKNLD   45 (81)
T ss_dssp             -CBCSSSCCBCSSTTEEEE----TTEEEESS-----SEECSSSCCEEC
T ss_pred             CCcCcCcCccccCceeEEe----CCcccccc-----cCccCCCCCCCC
Confidence            6789999999998766554    34 34433     478999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1zsoa1	156	Hypothetical protein MAL13P1.257 {Malaria parasite	86.31

>d1zsoa1 b.166.1.1 (A:1-156) Hypothetical protein MAL13P1.257 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: All beta proteins
fold: MAL13P1.257-like
superfamily: MAL13P1.257-like
family: MAL13P1.257-like
domain: Hypothetical protein MAL13P1.257
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.31  E-value=0.28  Score=39.08  Aligned_cols=60  Identities=12%  Similarity=0.130  Sum_probs=38.2

Q ss_pred             ceeeeecCCCCccccccceeeeec-ccc-ccccceeeEEEEEEcCCCCce--eEEeeCCCCCCeeecc
Q psy11026         49 LPYNIWCEGCNNHIGMGVRYNAEK-KKV-GMYYSTPVYQFRMKCHLCDSH--FEIKTDPGNLDYVIVS  112 (257)
Q Consensus        49 ~Pf~i~C~~C~~~I~kG~rfNA~K-~~v-g~Y~st~I~~F~~kC~~C~~~--i~i~TDPkn~dYv~~~  112 (257)
                      -=|.|.|..|++.-- .+-||..= -.+ |. =|+  -.|.|||..|..+  |.|...+....|....
T Consensus        26 ~~fkvkct~c~e~~~-~v~~~~~e~~e~~gs-RG~--Anfv~KCk~C~re~si~i~~~~~~~~y~~~~   89 (156)
T d1zsoa1          26 WIFNIRDSTSSLTRD-NIQFRKTDILEIPNS-RGT--ANFMIKWTEYPKYSTINFVNTKNSCSYEEVN   89 (156)
T ss_dssp             EEEEEEETTSSCEEE-EEEECTTCBEECTTS-SCE--ESEEECCSSSSCCEEEEEECCTTTTEEEGGG
T ss_pred             EEEEEEECCCCcCcC-CeEEcCcceEEcCCC-CcE--EEEEEECCCCCCeeeEEEEeCCCCccccccc
Confidence            347899999999544 47776532 122 21 122  3799999999665  6666555555676543