Psyllid ID: psy11306

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MWPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQEQVNQEDQKVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRYH
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEccEEEEEccEEEEcccccccEEEEEEccccccccEEEEEEEEEEEcccccccEEEEEEEccccccccccccccccccEEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccccEEEEEEEEccEEEEEEEccccccccccEEEEEEcccccccccEEEEEEEcccccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccccEcccccEEEcccEEEEcccccccccEEEEccccccccEEEEEEEEEEccccccccEEEEEEEccccccccccccccccccEEEEEEEcccccccccccEEEEEEEcccEEccccccccccEcccccHHHccccccEEEEEEEEccEEEEEEEccccccccccEEEEEccccEcccccEEEEEEccccccccccEEEEEEEEcccccccccccccHHHHccHHHHcccHHHccccHHccccHHHHHHHHHHHHHHHHHcHHHHHHHccHHcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccc
mwpfnkwlNLSLSLVLCYLVVLSssqnpverfeykysfkppylaqkdgsvpfweyggnciaslenvrvapslrsqkgaiwtkqttnfewWNVDIVFRVtgrgrigadgLAFWYTsekgsydgevfgssdrwkgLGLFFdsfdndnnhnnpyIMAVVNdgnmafdhqndgasqSLAGClrdfrnkpyptrARIQYYMNTLTVWFhngmtnneQDIEVCLRVeniylpkegyfgvsaatggladdhdilhfltssllppgakqqeQVNQEDQKVAQEYAQYEKKLEEQKqhsqnpverfeykysfkppylaqkdgyqkdhpdahpneeewyeSENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVsqgggiphqvvpgqpmpminnDALLASQNSLLSTVQELRYH
MWPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKgaiwtkqttnfewwnVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQEQVNQEDQKVAQEYAQYEKKLeeqkqhsqnpvERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRYH
MWPFNKWlnlslslvlcylvvlsssQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLffdsfdndnnhnnPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQEQVNQEDQKVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRYH
*WPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQ*****QSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSS***********************************************Y**************************************IFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVV******************************
**PFNKWLNLSLSLVLCYLVVLSSSQNPVERFEY*YSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLL*********************************************************************************************************************************************LASQNSLLST*******
MWPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPG************KVAQEYAQYEK***********PVERFEYKYSFKPPYLAQKDGYQKDHPDAH*************ELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRYH
MWPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPG****EQVNQEDQKVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQG************MPMINNDALLASQNSLLSTVQELRYH
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MWPFNKWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQxxxxxxxxxxxxxxxxxxxxxxxxxxxxSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRYH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
Q9D0F3517 Protein ERGIC-53 OS=Mus m yes N/A 0.883 0.705 0.460 6e-96
Q62902517 Protein ERGIC-53 OS=Rattu yes N/A 0.883 0.705 0.455 2e-95
Q9TU32 510 Protein ERGIC-53 OS=Chlor N/A N/A 0.866 0.701 0.459 1e-94
P49257 510 Protein ERGIC-53 OS=Homo yes N/A 0.866 0.701 0.456 1e-94
Q5FB95503 Protein ERGIC-53-like OS= no N/A 0.610 0.500 0.442 3e-56
Q9HAT1 526 Protein ERGIC-53-like OS= no N/A 0.585 0.460 0.444 9e-56
Q8VCD3505 Protein ERGIC-53-like OS= no N/A 0.610 0.499 0.421 7e-54
P49256356 Vesicular integral-membra no N/A 0.583 0.676 0.343 7e-37
Q9DBH5358 Vesicular integral-membra no N/A 0.559 0.645 0.345 2e-36
Q12907356 Vesicular integral-membra no N/A 0.559 0.648 0.345 3e-36
>sp|Q9D0F3|LMAN1_MOUSE Protein ERGIC-53 OS=Mus musculus GN=Lman1 PE=2 SV=1 Back     alignment and function desciption
 Score =  351 bits (901), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 182/395 (46%), Positives = 250/395 (63%), Gaps = 30/395 (7%)

Query: 23  SSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTK 82
           + ++ P  RFEYKYSFK P+L Q DG+VPFW + GN I S + +R+APSL+SQ+G++WTK
Sbjct: 45  TQAELPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTK 104

Query: 83  QTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFD 142
               FE W V++ FRVTGRGRIGADGLA WYT  +G  DG VFGS+D W G+G+FFDSFD
Sbjct: 105 AKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQG-LDGPVFGSADTWNGVGIFFDSFD 163

Query: 143 NDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVW 202
           ND   NNP I+ + N+G + +DHQNDGA+Q+LA C RDFRNKPYP RA+I YY  TLTV 
Sbjct: 164 NDGKKNNPAIVVIGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVM 223

Query: 203 FHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQ 262
            +NG T ++ D E C +VEN+ +P +G+FG+SAATGGLADDHD+L FLT  L  PG    
Sbjct: 224 INNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPG---- 279

Query: 263 EQVNQEDQKVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAH 322
                      +E    EK + E+++         E    F+     +K+ +QK HPD  
Sbjct: 280 -----------KEPPTAEKDISEKEKEKYQ-----EEFEHFQQELDKKKEEFQKGHPDLQ 323

Query: 323 PN-EEEWYESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQ-----GG 376
               ++ +ES   RELRQ+F+GQ+++    K +   LD +  +Q R ++ +++     G 
Sbjct: 324 GQPADDIFESIGDRELRQVFEGQNRIHLEIKQLNRQLDMILDEQRRYVSSLTEEISRRGA 383

Query: 377 GIPHQVVPGQPMPMINNDALLASQNSLLSTVQELR 411
           G P Q  PGQ +     D ++ SQ  +L  V E++
Sbjct: 384 GTPGQ--PGQ-VSQQELDTVVKSQQEILRQVNEVK 415
Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.
Mus musculus (taxid: 10090)
>sp|Q62902|LMAN1_RAT Protein ERGIC-53 OS=Rattus norvegicus GN=Lman1 PE=1 SV=1 Back     alignment and function description
>sp|Q9TU32|LMAN1_CHLAE Protein ERGIC-53 OS=Chlorocebus aethiops GN=LMAN1 PE=2 SV=1 Back     alignment and function description
>sp|P49257|LMAN1_HUMAN Protein ERGIC-53 OS=Homo sapiens GN=LMAN1 PE=1 SV=2 Back     alignment and function description
>sp|Q5FB95|LMA1L_RAT Protein ERGIC-53-like OS=Rattus norvegicus GN=Lman1l PE=1 SV=1 Back     alignment and function description
>sp|Q9HAT1|LMA1L_HUMAN Protein ERGIC-53-like OS=Homo sapiens GN=LMAN1L PE=2 SV=2 Back     alignment and function description
>sp|Q8VCD3|LMA1L_MOUSE Protein ERGIC-53-like OS=Mus musculus GN=Lman1l PE=2 SV=2 Back     alignment and function description
>sp|P49256|LMAN2_CANFA Vesicular integral-membrane protein VIP36 OS=Canis familiaris GN=LMAN2 PE=1 SV=1 Back     alignment and function description
>sp|Q9DBH5|LMAN2_MOUSE Vesicular integral-membrane protein VIP36 OS=Mus musculus GN=Lman2 PE=2 SV=2 Back     alignment and function description
>sp|Q12907|LMAN2_HUMAN Vesicular integral-membrane protein VIP36 OS=Homo sapiens GN=LMAN2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
307211962499 Protein ERGIC-53 [Harpegnathos saltator] 0.912 0.755 0.585 1e-137
345491197502 PREDICTED: LOW QUALITY PROTEIN: protein 0.917 0.754 0.564 1e-137
242004421496 ERGIC-53 protein precursor, putative [Pe 0.917 0.764 0.576 1e-136
194748957513 GF24333 [Drosophila ananassae] gi|190624 0.864 0.695 0.598 1e-135
17933708512 ergic53, isoform A [Drosophila melanogas 0.903 0.728 0.569 1e-135
289724707485 mannose lectin ERGIC-53 [Glossina morsit 0.864 0.736 0.597 1e-135
91085965508 PREDICTED: similar to AGAP005404-PA [Tri 0.922 0.75 0.571 1e-134
350422669504 PREDICTED: protein ERGIC-53-like [Bombus 0.915 0.75 0.563 1e-134
322778911500 hypothetical protein SINV_15572 [Solenop 0.917 0.758 0.575 1e-134
195491154512 GE20751 [Drosophila yakuba] gi|194179541 0.864 0.697 0.591 1e-134
>gi|307211962|gb|EFN87874.1| Protein ERGIC-53 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/422 (58%), Positives = 306/422 (72%), Gaps = 45/422 (10%)

Query: 6   KWLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLEN 65
           +WL   L  ++C  V     + P  +FEYKYSFKPPYLAQKDGSVPFWEYGGN IAS EN
Sbjct: 8   RWL---LVFLICCAVSPGHGETPHRKFEYKYSFKPPYLAQKDGSVPFWEYGGNAIASAEN 64

Query: 66  VRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVF 125
           VRVAPSLRSQKGAIW KQ TNF+WW V+IVFRVTGRGRIGADGLAFWYTS KG Y+G VF
Sbjct: 65  VRVAPSLRSQKGAIWAKQPTNFDWWEVNIVFRVTGRGRIGADGLAFWYTSTKGLYNGTVF 124

Query: 126 GSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKP 185
           GSSD W GLG+FFDSFDNDN HNNPYIMAVVNDG   FDH NDG++Q L+GCLRDFRNKP
Sbjct: 125 GSSDMWTGLGIFFDSFDNDNKHNNPYIMAVVNDGTKVFDHTNDGSTQQLSGCLRDFRNKP 184

Query: 186 YPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHD 245
           +PTRAR++YY NTLT+ FHNG+T N QD ++C R++N+ LPK G+FGVSAATGGLADDHD
Sbjct: 185 FPTRARVEYYKNTLTLLFHNGVTENVQDYDICFRIDNVILPKSGFFGVSAATGGLADDHD 244

Query: 246 ILHFLTSSLLPPG--AKQQEQVNQEDQ-KVAQEYAQYEKKLEEQKQHSQNPVERFEYKYS 302
           +L+FLT+SL PPG       +V+ E+Q K+ QEY  Y+KKLEEQK+              
Sbjct: 245 VLYFLTTSLYPPGQLPVNGHKVSLEEQAKLNQEYLDYQKKLEEQKEE------------- 291

Query: 303 FKPPYLAQKDGYQKDHPDAHPNE--EEWYESENQRELRQIFQGQSQLAEWTKAIATGLDA 360
                      Y K+HPD       E+++E+ENQRELRQ+F+GQSQ+ E  + + + LD 
Sbjct: 292 -----------YHKEHPDRLRKSEFEDYFETENQRELRQVFEGQSQIFEVLRGLHSKLDE 340

Query: 361 LQQKQDRILAVVS--QGGGIPHQVVPGQP--MPMINN-------DALLASQNSLLSTVQE 409
           +  +Q+R L+++S  Q GG+  QV  GQP   PM+ +       DA+L +QN +L+T +E
Sbjct: 341 VVGRQERTLSLISQLQAGGV--QVSGGQPDGQPMLIDTIRRQEVDAVLTNQNIILNTARE 398

Query: 410 LR 411
           ++
Sbjct: 399 IK 400

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345491197|ref|XP_001607791.2| PREDICTED: LOW QUALITY PROTEIN: protein ERGIC-53-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242004421|ref|XP_002423088.1| ERGIC-53 protein precursor, putative [Pediculus humanus corporis] gi|212506019|gb|EEB10350.1| ERGIC-53 protein precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|194748957|ref|XP_001956907.1| GF24333 [Drosophila ananassae] gi|190624189|gb|EDV39713.1| GF24333 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|17933708|ref|NP_524776.1| ergic53, isoform A [Drosophila melanogaster] gi|28574399|ref|NP_788479.1| ergic53, isoform B [Drosophila melanogaster] gi|6980026|gb|AAF34704.1|AF223385_1 rhea [Drosophila melanogaster] gi|7295074|gb|AAF50400.1| ergic53, isoform A [Drosophila melanogaster] gi|15292253|gb|AAK93395.1| LD43551p [Drosophila melanogaster] gi|28380569|gb|AAO41269.1| ergic53, isoform B [Drosophila melanogaster] gi|220956014|gb|ACL90550.1| ergic53-PA [synthetic construct] Back     alignment and taxonomy information
>gi|289724707|gb|ADD18318.1| mannose lectin ERGIC-53 [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|91085965|ref|XP_971530.1| PREDICTED: similar to AGAP005404-PA [Tribolium castaneum] gi|270010174|gb|EFA06622.1| hypothetical protein TcasGA2_TC009540 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350422669|ref|XP_003493244.1| PREDICTED: protein ERGIC-53-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|322778911|gb|EFZ09327.1| hypothetical protein SINV_15572 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|195491154|ref|XP_002093440.1| GE20751 [Drosophila yakuba] gi|194179541|gb|EDW93152.1| GE20751 [Drosophila yakuba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
FB|FBgn0035909 512 ergic53 "ergic53" [Drosophila 0.888 0.716 0.526 1.1e-103
UNIPROTKB|F1SMS8517 LMAN1 "Uncharacterized protein 0.636 0.508 0.522 3e-91
MGI|MGI:1917611517 Lman1 "lectin, mannose-binding 0.636 0.508 0.514 1.9e-89
UNIPROTKB|P49257510 LMAN1 "Protein ERGIC-53" [Homo 0.636 0.515 0.522 3e-89
RGD|71020517 Lman1 "lectin, mannose-binding 0.636 0.508 0.518 5e-89
UNIPROTKB|E2QW60518 LMAN1 "Uncharacterized protein 0.636 0.507 0.507 8e-89
UNIPROTKB|F1NEW0503 LMAN1 "Uncharacterized protein 0.636 0.522 0.511 1.7e-88
ZFIN|ZDB-GENE-060201-4513 lman1 "lectin, mannose-binding 0.636 0.512 0.488 5.7e-86
UNIPROTKB|E1C4P1 505 LMAN1 "Uncharacterized protein 0.878 0.718 0.434 3.8e-85
UNIPROTKB|F1ME46518 LMAN1 "Uncharacterized protein 0.624 0.498 0.460 4.1e-79
FB|FBgn0035909 ergic53 "ergic53" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
 Identities = 202/384 (52%), Positives = 261/384 (67%)

Query:    31 RFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWW 90
             RFEYKYSFKPPYLAQKDG+VPFWEYGGN IAS E+VRVAPSLRSQKGAIWTK  TNF+WW
Sbjct:    34 RFEYKYSFKPPYLAQKDGTVPFWEYGGNAIASSESVRVAPSLRSQKGAIWTKSQTNFDWW 93

Query:    91 NVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLXXXXXXXXXXXXXP 150
             +V+IVFRVTGRGRIGADGLAFWYT+EKG Y+G VFGSSDRW GL +             P
Sbjct:    94 DVEIVFRVTGRGRIGADGLAFWYTTEKGDYNGPVFGSSDRWNGLAIMFDSFDNDNKHNNP 153

Query:   151 YIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNN 210
             YI AV+NDG   +DH  DG +Q L+GCLRDFRNKP+PTRARI+YY N LTV  HNGM+NN
Sbjct:   154 YISAVLNDGTKLYDHAEDGTTQLLSGCLRDFRNKPFPTRARIEYYNNVLTVMIHNGMSNN 213

Query:   211 EQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQQEQVNQEDQ 270
               D E+CLR + + LPK GYFG+SAATGGLADDHD+ HFLT+SL   G  Q++   +  +
Sbjct:   214 NDDYELCLRADGVNLPKNGYFGISAATGGLADDHDVFHFLTTSLHAAGQVQEQPKVENQE 273

Query:   271 KVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNE--EEW 328
             K+ QEY +Y+ KLE+QKQ         EYK      +  ++D +++ +   +  E  + W
Sbjct:   274 KLTQEYKEYQDKLEKQKQ---------EYKKDHPDEHKDEED-WEEFYESENQRELRQIW 323

Query:   329 Y-ESENQRELRQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGGGIPHQVVPGQP 387
               +S+    LR++ +   ++    +   T L  + +   + L   +  GG+P Q +P   
Sbjct:   324 QGQSQIADHLRELSRKVDEIIGRQE---TTLSLVSRNAGQALPPPA-AGGVPQQQLPVGA 379

Query:   388 MPMINNDALLASQNSLLSTVQELR 411
             +   + D LL +QN LLS+++E+R
Sbjct:   380 VSRSDVDLLLTNQNMLLSSIREIR 403
GO:0005537 "mannose binding" evidence=ISS
GO:0016020 "membrane" evidence=IEA
UNIPROTKB|F1SMS8 LMAN1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1917611 Lman1 "lectin, mannose-binding, 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P49257 LMAN1 "Protein ERGIC-53" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|71020 Lman1 "lectin, mannose-binding, 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2QW60 LMAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NEW0 LMAN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060201-4 lman1 "lectin, mannose-binding, 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4P1 LMAN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1ME46 LMAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9D0F3LMAN1_MOUSENo assigned EC number0.46070.88370.7059yesN/A
P49257LMAN1_HUMANNo assigned EC number0.45660.86680.7019yesN/A
Q62902LMAN1_RATNo assigned EC number0.45560.88370.7059yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
cd06902225 cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL t 1e-149
pfam03388226 pfam03388, Lectin_leg-like, Legume-like lectin fam 1e-110
cd07308218 cd07308, lectin_leg-like, legume-like lectins: ERG 2e-68
cd06901248 cd06901, lectin_VIP36_VIPL, VIP36 and VIPL type 1 9e-58
cd06903215 cd06903, lectin_EMP46_EMP47, EMP46 and EMP47 type 1e-20
cd01951223 cd01951, lectin_L-type, legume lectins 2e-17
cd06902 225 cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL t 9e-06
pfam00139231 pfam00139, Lectin_legB, Legume lectin domain 6e-05
>gnl|CDD|173890 cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information 
 Score =  420 bits (1083), Expect = e-149
 Identities = 153/224 (68%), Positives = 180/224 (80%), Gaps = 1/224 (0%)

Query: 31  RFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWW 90
           RFEYKYSFK P+LAQKDG+VPFW +GG+ IASLE VR+ PSLRS+KG++WTK   +FE W
Sbjct: 2   RFEYKYSFKGPHLAQKDGTVPFWSHGGDAIASLEQVRLTPSLRSKKGSVWTKNPFSFENW 61

Query: 91  NVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNP 150
            V++ FRVTGRGRIGADGLA WYT E+G  +G VFGSSD+W G+G+FFDSFDND   NNP
Sbjct: 62  EVEVTFRVTGRGRIGADGLAIWYTKERGE-EGPVFGSSDKWNGVGIFFDSFDNDGKKNNP 120

Query: 151 YIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGMTNN 210
            I+ V NDG  ++DHQNDG +Q+L  CLRDFRNKPYP RA+I YY N LTV  +NG T N
Sbjct: 121 AILVVGNDGTKSYDHQNDGLTQALGSCLRDFRNKPYPVRAKITYYQNVLTVSINNGFTPN 180

Query: 211 EQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSL 254
           + D E+C RVEN+ LP  GYFGVSAATGGLADDHD+L FLT SL
Sbjct: 181 KDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTFSL 224

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherited hemophilia known as combined deficiency of factors V and VIII (F5F8D). In addition to the lectin and transmembrane domains, ERGIC-53 and ERGL have a short N-terminal cytoplasmic region of about 12 amino acids. ERGIC-53 forms disulphide-linked homodimers and homohexamers. ERGIC-53 and ERGL are sequence-similar to the lectins of leguminous plants. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 225
>gnl|CDD|217528 pfam03388, Lectin_leg-like, Legume-like lectin family Back     alignment and domain information
>gnl|CDD|173892 cd07308, lectin_leg-like, legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>gnl|CDD|173889 cd06901, lectin_VIP36_VIPL, VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>gnl|CDD|173891 cd06903, lectin_EMP46_EMP47, EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins Back     alignment and domain information
>gnl|CDD|173890 cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
KOG3838|consensus497 100.0
cd06902225 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran 100.0
PF03388229 Lectin_leg-like: Legume-like lectin family; InterP 100.0
cd06901248 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr 100.0
cd06903215 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem 100.0
cd07308218 lectin_leg-like legume-like lectins: ERGIC-53, ERG 100.0
KOG3839|consensus351 100.0
cd01951223 lectin_L-type legume lectins. The L-type (legume-t 99.98
cd06899236 lectin_legume_LecRK_Arcelin_ConA legume lectins, l 99.96
PF00139236 Lectin_legB: Legume lectin domain; InterPro: IPR00 99.94
cd06900255 lectin_VcfQ VcfQ bacterial pilus biogenesis protei 99.07
KOG3838|consensus 497 94.97
>KOG3838|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.8e-102  Score=768.84  Aligned_cols=362  Identities=51%  Similarity=0.884  Sum_probs=340.9

Q ss_pred             CCCCceeeeeeeeccCCcccCCCCCCCCeEEeeeeEeeCCeEEeCCCCCCceeEEEeCCcccccceEEEEEEEEEeCCCC
Q psy11306         25 SQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRI  104 (413)
Q Consensus        25 ~~~~~~r~e~k~Sf~~P~l~~~~~~i~~W~~~GdAii~~~~IRLTp~~~sq~GsiWsk~pi~~~sFe~eftFrI~g~g~~  104 (413)
                      ..+|||||||||||++|+|++++++||+|.++||||.+.+.|||+|++++++|++|+|..+++++|+||++|||+|.||.
T Consensus        28 ~~~~~rrFEYK~SFk~P~Laq~dgtiPFW~~~GdAIas~eqvRlaPSmrsrkGavWtka~~~fe~weVev~~rVtGrGRi  107 (497)
T KOG3838|consen   28 GTPPHRRFEYKYSFKGPRLAQPDGTIPFWSHHGDAIASSEQVRLAPSMRSRKGAVWTKASVPFENWEVEVQFRVTGRGRI  107 (497)
T ss_pred             CCCccceeeeeecccCCccccCCCCcceeeecCcccccccceeeccccccccCceeecccCCcccceEEEEEEecccccc
Confidence            35699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCCCCCCCCcCCCCCCccEEEEEEEccCCCCCCCCCeEEEEecCCcccccCCCCCCcccccceeeccccC
Q psy11306        105 GADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNK  184 (413)
Q Consensus       105 ggDGlAFW~t~~~~~~~G~vfG~~~~f~GlaI~FDTf~N~~~~~~P~I~i~~NDGt~~yd~~~DG~~~~L~~C~~~~rn~  184 (413)
                      ||||||||||...+ ..|+|||+.+.|+|+|||||+|+||+++|+|+|+++.|||+..|||.+||..+.|++|.+||||+
T Consensus       108 GAdGlaiWYt~~~G-~~GpVfGg~d~WnGigiffDSfdnD~qknnP~Is~~lndGt~~ydh~~DGasQ~LssCqrDFRNk  186 (497)
T KOG3838|consen  108 GADGLAIWYTRGRG-HVGPVFGGLDSWNGIGIFFDSFDNDGQKNNPAISVLLNDGTIPYDHPGDGASQGLSSCQRDFRNK  186 (497)
T ss_pred             cCCceEEEEecCCC-cccccccccccccceEEEeecccccCCcCCccEEEEecCCcccccCCCccHHHHHHHhhHHhccC
Confidence            99999999999999 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcceEEEEEEECCEEEEEEEeCccCCCCceeEEEEecccccCCCcEEEEEeeCCCCCccEEEEEEEEeecCCCCCCC---
Q psy11306        185 PYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQ---  261 (413)
Q Consensus       185 ~~p~~~rI~Y~~~~LsV~v~~~~t~~~~~~~~C~~v~~v~LP~~~yfGfSAaTG~lad~HDIls~~~~sL~~p~~~~---  261 (413)
                      |+|+++||+|++++|+|+|+++++++ ++|+.|.+++++.||+++|||||||||+++|+|||++|.||+|+.|+++|   
T Consensus       187 PyPvRarItY~~nvLtv~innGmtp~-d~yE~C~rve~~~lp~nGyFGvSAATGgLADDHDVl~FltfsL~e~~qeppqP  265 (497)
T KOG3838|consen  187 PYPVRARITYYGNVLTVMINNGMTPS-DDYEFCVRVENLLLPPNGYFGVSAATGGLADDHDVLSFLTFSLSEPGQEPPQP  265 (497)
T ss_pred             CCCceEEEEEeccEEEEEEcCCCCCC-CCcceeEeccceeccCCCeeeeeecccccccccceeeeEEeeecCCCCCCCCc
Confidence            99999999999999999999999988 78999999999999999999999999999999999999999999999985   


Q ss_pred             -cCCChHHHHHHHHHHHHHHHHHHHhhhccCCccccccccccCCCCcccccCCccCCCCCCCCCchhhh---hccchHHH
Q psy11306        262 -QEQVNQEDQKVAQEYAQYEKKLEEQKQHSQNPVERFEYKYSFKPPYLAQKDGYQKDHPDAHPNEEEWY---ESENQREL  337 (413)
Q Consensus       262 -~~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l  337 (413)
                       .|+.+.|++||++|++.+|.+||++|+                        +|+|.|||+++++|+||   |++++|||
T Consensus       266 ~~E~qe~ek~kyqeEfe~~q~elek~k~------------------------efkk~hpd~~~e~ee~~~~yEs~~~Rel  321 (497)
T KOG3838|consen  266 FLEMQELEKAKYQEEFEWAQLELEKRKD------------------------EFKKSHPDAQGEGEELFDLYESLGHREL  321 (497)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhhhHh------------------------hhccCCchhhcchhhhhhhhhccchHHH
Confidence             467778999999999999999999999                        99999999999977777   99999999


Q ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhccccCC--CccCCCCCCCCCCccchHHHHHhhHHHHHHHHHHhc
Q psy11306        338 RQIFQGQSQLAEWTKAIATGLDALQQKQDRILAVVSQGG--GIPHQVVPGQPMPMINNDALLASQNSLLSTVQELRY  412 (413)
Q Consensus       338 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~  412 (413)
                      ||||++||+|++.|++|++|||++++.|+|..+.+...+  +.+.+++.+....+.++|.++.+|+.|+++++|||.
T Consensus       322 rqi~egQn~i~~~l~ql~rql~~il~~Q~~~~~a~~p~asg~~p~~~~~gG~~sqse~d~v~k~~~~l~~qiremkq  398 (497)
T KOG3838|consen  322 RQILEGQNAIHKQLAQLERQLDKILGPQARPVGALAPDASGQIPSTPGRGGHLSQSENDDVAKVQALLLGQIREMKQ  398 (497)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHhCccccCCcccCCcccCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999997765543  233333322334668999999999999999999985

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates Back     alignment and domain information
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain Back     alignment and domain information
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain Back     alignment and domain information
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47 Back     alignment and domain information
>KOG3839|consensus Back     alignment and domain information
>cd01951 lectin_L-type legume lectins Back     alignment and domain information
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor Back     alignment and domain information
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported Back     alignment and domain information
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain Back     alignment and domain information
>KOG3838|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
1gv9_A260 P58ERGIC-53 Length = 260 9e-79
1r1z_A263 The Crystal Structure Of The Carbohydrate Recogniti 1e-78
3a4u_A255 Crystal Structure Of Mcfd2 In Complex With Carbohyd 4e-78
3lcp_A247 Crystal Structure Of The Carbohydrate Recognition D 5e-78
2duo_A253 Crystal Structure Of Vip36 ExoplasmicLUMENAL DOMAIN 2e-34
>pdb|1GV9|A Chain A, P58ERGIC-53 Length = 260 Back     alignment and structure 
Iteration: 1

 Score =  290 bits (743), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 133/231 (57%), Positives = 166/231 (71%), Gaps = 1/231 (0%)
Query: 28  PVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNF 87
           P  RFEYKYSFK P+L Q DG+VPFW + GN I S + +R+APSL+SQ+G++WTK    F
Sbjct: 26  PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF 85
Query: 88  EWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLXXXXXXXXXXX 147
           E W V++ FRVTGRGRIGADGLA WYT  +G  DG VFGS+D W G+G+           
Sbjct: 86  ENWEVEVTFRVTGRGRIGADGLAIWYTENQG-LDGPVFGSADMWNGVGIFFDSFDNDGKK 144
Query: 148 XXPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGM 207
             P I+ V N+G + +DHQNDGA+Q+LA C RDFRNKPYP RA+I YY  TLTV  +NG 
Sbjct: 145 NNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGF 204
Query: 208 TNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPG 258
           T ++ D E C +VEN+ +P +G+FG+SAATGGLADDHD+L FLT  L  PG
Sbjct: 205 TPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPG 255
>pdb|1R1Z|A Chain A, The Crystal Structure Of The Carbohydrate Recognition Domain Of The Glycoprotein Sorting Receptor P58ERGIC-53 Reveals A Novel Metal Binding Site And Conformational Changes Associated With Calcium Ion Binding Length = 263 Back     alignment and structure
>pdb|3A4U|A Chain A, Crystal Structure Of Mcfd2 In Complex With Carbohydrate Recognition Domain Of Ergic-53 Length = 255 Back     alignment and structure
>pdb|3LCP|A Chain A, Crystal Structure Of The Carbohydrate Recognition Domain Of Complex With Mcfd2 Length = 247 Back     alignment and structure
>pdb|2DUO|A Chain A, Crystal Structure Of Vip36 ExoplasmicLUMENAL DOMAIN, CA2+- Bound Form Length = 253 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 7e-93
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 2e-77
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 6e-77
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 8e-76
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 1e-75
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 3e-10
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 5e-08
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 7e-08
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 5e-07
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 5e-07
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 2e-06
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 2e-06
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 8e-06
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 8e-06
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 3e-05
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 4e-05
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 7e-05
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 9e-05
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 2e-04
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 3e-04
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 5e-04
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260 Back     alignment and structure
 Score =  279 bits (714), Expect = 7e-93
 Identities = 143/254 (56%), Positives = 181/254 (71%), Gaps = 1/254 (0%)

Query: 7   WLNLSLSLVLCYLVVLSSSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENV 66
             +             + ++ P  RFEYKYSFK P+L Q DG+VPFW + GN I S + +
Sbjct: 5   GSDGMGGDAAAPGAAGTQAELPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQI 64

Query: 67  RVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFG 126
           R+APSL+SQ+G++WTK    FE W V++ FRVTGRGRIGADGLA WYT  +G  DG VFG
Sbjct: 65  RIAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQG-LDGPVFG 123

Query: 127 SSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPY 186
           S+D W G+G+FFDSFDND   NNP I+ V N+G + +DHQNDGA+Q+LA C RDFRNKPY
Sbjct: 124 SADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPY 183

Query: 187 PTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDI 246
           P RA+I YY  TLTV  +NG T ++ D E C +VEN+ +P +G+FG+SAATGGLADDHD+
Sbjct: 184 PVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDV 243

Query: 247 LHFLTSSLLPPGAK 260
           L FLT  L  PG +
Sbjct: 244 LSFLTFQLTEPGKE 257
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Length = 226 Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Length = 256 Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Length = 222 Back     alignment and structure
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253 Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261 Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234 Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223 Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240 Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243 Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252 Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253 Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240 Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226 Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253 Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233 Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242 Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242 Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
1gv9_A260 P58/ergic-53; lectin, carbohydrate binding; 1.46A 100.0
2dur_A253 VIP36;, vesicular integral-membrane protein VIP36; 100.0
2a6v_A226 EMP46P; beta sandwich, carbohydrate binding protei 100.0
2a6z_A222 EMP47P (FORM2); beta sandwich, carbohydrate bindin 100.0
2a6y_A256 EMP47P (FORM1); beta sandwich, carbohydrate bindin 100.0
2bqp_A234 Protein (PEA lectin); D-glucopyranose complex, sug 100.0
2fmd_A240 Lectin, agglutinin, BMA; legume lectin, beta sandw 100.0
1sbf_A253 Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G 99.97
1hql_A257 Lectin; xenograft antigen, sugar BI protein; HET: 99.97
1f9k_A238 Acidic lectin; legume lectin, glycosylated protein 99.97
1g7y_A253 Stem/LEAF lectin DB58; jelly roll fold, sugar bind 99.97
1n47_A233 Isolectin B4; cancer antigen, vicia villosa lectin 99.97
1gsl_A243 Griffonia simplicifolia lectin 4; glycoprotein, ma 99.97
1fat_A252 Phytohemagglutinin-L; glycoprotein, plant defense 99.97
1wbf_A242 Protein (agglutinin); lectin (agglutinin), legume 99.97
2eig_A234 Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin 99.96
1qnw_A242 Chitin binding lectin, UEA-II; carbohydrate bindin 99.96
1dbn_A239 MAL, protein (leukoagglutinin); plant lectin, carb 99.96
1fny_A237 BARK lectin, BARK agglutinin I,polypeptide A; legu 99.96
1avb_A226 Arcelin-1; lectin-like glycoprotein, plant defense 99.96
1v6i_A232 Agglutinin, PNA, galactose-binding lectin; open qu 99.96
1gzc_A239 Erythrina crista-galli lectin; carbohydrate, sugar 99.95
1dhk_B223 Bean lectin-like inhibitor, porcine pancreatic alp 99.95
1fx5_A242 UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO 99.95
1ioa_A240 Arcelin-5A, ARC5A; lectin-like proteins, plant def 99.95
3ujo_A281 Legume lectin; carbohydrate-binding, galactose, ad 99.94
3ipv_A251 Lectin alpha chain; galactose binding, SEED lectin 99.94
3zyr_A261 Lectin; sugar binding protein, N-glycan; HET: NAG 99.94
2ltn_A181 PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO 99.74
1qmo_E133 Mannose binding lectin, FRIL; crosslink, hematopoi 99.55
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 99.38
1qmo_A113 Mannose binding lectin, FRIL; crosslink, hematopoi 98.98
1nls_A237 Concanavalin A; lectin, agglutinin; 0.94A {Canaval 98.64
2ltn_B52 PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP 98.17
4b1m_A185 Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil 89.99
1oq1_A223 Protein YESU; structural genomics, singleton, PSI, 88.1
>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Back     alignment and structure
Probab=100.00  E-value=2.3e-57  Score=439.89  Aligned_cols=237  Identities=60%  Similarity=1.117  Sum_probs=210.2

Q ss_pred             cCCCCceeeeeeeeccCCcccCCCCCCCCeEEeeeeEeeCCeEEeCCCCCCceeEEEeCCcccccceEEEEEEEEEeCCC
Q psy11306         24 SSQNPVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGR  103 (413)
Q Consensus        24 ~~~~~~~r~e~k~Sf~~P~l~~~~~~i~~W~~~GdAii~~~~IRLTp~~~sq~GsiWsk~pi~~~sFe~eftFrI~g~g~  103 (413)
                      .+..+||||||+|||++||+...++.+++|.+.|+|++++++|||||+.++++|++|++.|+.+.+|+|+|+|+|+++++
T Consensus        22 ~~~~~~~~~~~~~Sf~~P~~~~~~~~i~~w~~~G~a~i~~~~IrLT~~~~~~~G~~w~~~p~~~~sF~t~F~F~I~~~~~  101 (260)
T 1gv9_A           22 QAELPHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGR  101 (260)
T ss_dssp             ----CEEEECGGGCEECSSCSCTTSCBTTEEEEETCEECSSCEEEECSSTTCEEEEEESSCBCCSSEEEEEEEEEECSSS
T ss_pred             eccccccccccceeEcCccccCCCCccCCeEEcccEEeeCCEEEeCCCCCCCEEEEEECCCccccCEEEEEEEEEecCCC
Confidence            45789999999999999999877788999999999999999999999999999999999999999999999999998877


Q ss_pred             CCCCeEEEEEecCCCCCCCCcCCCCCCccEEEEEEEccCCCCCCCCCeEEEEecCCcccccCCCCCCcccccceeecccc
Q psy11306        104 IGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRN  183 (413)
Q Consensus       104 ~ggDGlAFW~t~~~~~~~G~vfG~~~~f~GlaI~FDTf~N~~~~~~P~I~i~~NDGt~~yd~~~DG~~~~L~~C~~~~rn  183 (413)
                      .+||||||||++++. ..|++||..+.|+|||||||||.|.+.+++|+|++++|||++.||+.+|+...++++|.++||+
T Consensus       102 ~~gdGlAF~l~~~~~-~~g~~~G~~~~~~gvaVefDT~~N~~~~~~p~I~~~indg~~~~d~~~d~~s~~~~~c~~~~~n  180 (260)
T 1gv9_A          102 IGADGLAIWYTENQG-LDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRN  180 (260)
T ss_dssp             CCCCEEEEEEESSCC-CEEEETTECSCCEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHCSEEECCCCBS
T ss_pred             CCCCeEEEEEecCCC-CCCCccCCCCCCCEEEEEEECCCCCCCCCCCceEEEeCCCceEeecCCCcccceeeccChhhcc
Confidence            889999999999887 7899999999999999999999997666679999999999999999887777789999999999


Q ss_pred             CCcceEEEEEEECCEEEEEEEeCccCCCCceeEEEEecccccCCCcEEEEEeeCCCCCccEEEEEEEEeecCCCCCCC
Q psy11306        184 KPYPTRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLPPGAKQ  261 (413)
Q Consensus       184 ~~~p~~~rI~Y~~~~LsV~v~~~~t~~~~~~~~C~~v~~v~LP~~~yfGfSAaTG~lad~HDIls~~~~sL~~p~~~~  261 (413)
                      .+.+++|||+|+++.|+|.+++..+++...|.+|++++.+.||+++||||||+||.++|+|||++|++++|+.|+++|
T Consensus       181 ~g~~~~~~I~Y~~~~L~V~l~~~~~~~~~~~~~~~~vd~~~LP~~~~vGfSAaTG~~~e~hdIlsw~~~~l~~~~~~~  258 (260)
T 1gv9_A          181 KPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEP  258 (260)
T ss_dssp             CSSCEEEEEEEETTEEEEEEECSSCCCTTCCEEEEEETTCCCCSSBEEEEEEECCSSCCEEEEEEEEEEEEEC-----
T ss_pred             CCCcEEEEEEEECCEEEEEEeeccCCCCCcceEEEEEcccccCCCcEEEEEEeCCCCcceEEEEEEEEEEeecCCCCC
Confidence            999999999999999999999754444557999999999999999999999999999999999999999999998764
>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Back     alignment and structure
>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Back     alignment and structure
>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Back     alignment and structure
>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Back     alignment and structure
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Back     alignment and structure
>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Back     alignment and structure
>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Back     alignment and structure
>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Back     alignment and structure
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Back     alignment and structure
>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Back     alignment and structure
>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Back     alignment and structure
>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Back     alignment and structure
>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Back     alignment and structure
>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Back     alignment and structure
>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Back     alignment and structure
>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Back     alignment and structure
>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Back     alignment and structure
>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Back     alignment and structure
>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Back     alignment and structure
>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Back     alignment and structure
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Back     alignment and structure
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Back     alignment and structure
>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Back     alignment and structure
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A* Back     alignment and structure
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Back     alignment and structure
>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Back     alignment and structure
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Back     alignment and structure
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Back     alignment and structure
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Back     alignment and structure
>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Back     alignment and structure
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Back     alignment and structure
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 413
d1gv9a_228 b.29.1.13 (A:) Carbohydrate-recognition domain of 3e-76
d1gv9a_ 228 b.29.1.13 (A:) Carbohydrate-recognition domain of 0.002
d2a6za1221 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake 3e-62
d2a6va1218 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake 1e-61
d1ukga_241 b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero 4e-22
d1g8wa_233 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 5e-22
d1avba_226 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 4e-18
d1ioaa_228 b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar 1e-17
g2ltn.1229 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum 6e-17
d1n47a_233 b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi 2e-16
d1g7ya_253 b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos 3e-16
d1dhkb_204 b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar 3e-15
d1dbna_239 b.29.1.1 (A:) Legume lectin {Maackia amurensis, le 5e-15
d1fnya_237 b.29.1.1 (A:) Legume lectin {Black locust (Robinia 7e-15
d1g9fa_251 b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) 8e-15
g1qmo.1230 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich 2e-12
d1v6ia_232 b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog 2e-09
d1leda_243 b.29.1.1 (A:) Legume lectin {West-central african 3e-07
d1qnwa_237 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 4e-05
d1hqla_236 b.29.1.1 (A:) Legume lectin {Griffonia simplicifol 1e-04
d1gzca_239 b.29.1.1 (A:) Legume lectin {Cockspur coral tree ( 3e-04
d1fx5a_240 b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus 0.002
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  234 bits (598), Expect = 3e-76
 Identities = 141/227 (62%), Positives = 174/227 (76%), Gaps = 1/227 (0%)

Query: 28  PVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNF 87
           P  RFEYKYSFK P+L Q DG+VPFW + GN I S + +R+APSL+SQ+G++WTK    F
Sbjct: 1   PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF 60

Query: 88  EWWNVDIVFRVTGRGRIGADGLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNH 147
           E W V++ FRVTGRGRIGADGLA WYT  +G  DG VFGS+D W G+G+FFDSFDND   
Sbjct: 61  ENWEVEVTFRVTGRGRIGADGLAIWYTENQGL-DGPVFGSADMWNGVGIFFDSFDNDGKK 119

Query: 148 NNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYPTRARIQYYMNTLTVWFHNGM 207
           NNP I+ V N+G + +DHQNDGA+Q+LA C RDFRNKPYP RA+I YY  TLTV  +NG 
Sbjct: 120 NNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGF 179

Query: 208 TNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSL 254
           T ++ D E C +VEN+ +P +G+FG+SAATGGLADDHD+L FLT  L
Sbjct: 180 TPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQL 226
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228 Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218 Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241 Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233 Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226 Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228 Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233 Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253 Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204 Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239 Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237 Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251 Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232 Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243 Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237 Back     information, alignment and structure
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236 Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239 Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
d1gv9a_228 Carbohydrate-recognition domain of P58/ERGIC-53 {R 100.0
d2a6va1218 Emp46p N-terminal domain {Baker's yeast (Saccharom 100.0
d2a6za1221 Emp47p N-terminal domain {Baker's yeast (Saccharom 100.0
g2ltn.1229 Legume lectin {Garden pea (Pisum sativum) [TaxId: 99.97
d1g7ya_253 Legume lectin {Horse gram (Dolichos biflorus), dif 99.97
d1n47a_233 Legume lectin {Hairy vetch (Vicia villosa), isolec 99.97
d1fnya_237 Legume lectin {Black locust (Robinia pseudoacacia) 99.96
g1qmo.1230 Legume lectin {Field bean (Dolichos lablab), Fril 99.96
d1g8wa_233 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 99.96
d1ukga_241 Legume lectin {Bloodwood tree (Pterocarpus angolen 99.96
d1avba_226 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 99.96
d1v6ia_232 Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3 99.95
d1g9fa_251 Legume lectin {Soybean (Glycine max) [TaxId: 3847] 99.95
d1dhkb_204 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 99.95
d1hqla_236 Legume lectin {Griffonia simplicifolia, lectin I-b 99.94
d1dbna_239 Legume lectin {Maackia amurensis, leukoagglutinin 99.93
d1ioaa_228 Phytohemagglutinin-L, PHA-L, also arcelin {Kidney 99.93
d1gzca_239 Legume lectin {Cockspur coral tree (Erythrina cris 99.93
d2d3sa1237 Legume lectin {Winged bean (Psophocarpus tetragono 99.93
d1leda_243 Legume lectin {West-central african legume (Griffo 99.93
d1f9ka_234 Legume lectin {Winged bean (Psophocarpus tetragono 99.92
d1qnwa_237 Legume lectin {Furze (Ulex europaeus), UEA-II [Tax 99.91
d1fx5a_240 Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI 99.91
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 99.39
d1nlsa_237 Concanavalin A {Jack bean (Canavalia ensiformis) [ 98.56
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 96.48
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-50  Score=375.06  Aligned_cols=228  Identities=62%  Similarity=1.140  Sum_probs=211.1

Q ss_pred             CceeeeeeeeccCCcccCCCCCCCCeEEeeeeEeeCCeEEeCCCCCCceeEEEeCCcccccceEEEEEEEEEeCCCCCCC
Q psy11306         28 PVERFEYKYSFKPPYLAQKDGSVPFWEYGGNCIASLENVRVAPSLRSQKGAIWTKQTTNFEWWNVDIVFRVTGRGRIGAD  107 (413)
Q Consensus        28 ~~~r~e~k~Sf~~P~l~~~~~~i~~W~~~GdAii~~~~IRLTp~~~sq~GsiWsk~pi~~~sFe~eftFrI~g~g~~ggD  107 (413)
                      |||||||+|||.+||+.++++.+++|++.|+|++++++|||||+.++++|+||++.|+++++|+++|+|++.+.+..+||
T Consensus         1 ~~~~~~~~~sf~~P~~~~~~~~~~~w~~~G~a~i~~~~i~LT~~~~~~~G~v~~~~p~~~~~F~~~f~f~~~~~~~~ggd   80 (228)
T d1gv9a_           1 PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGAD   80 (228)
T ss_dssp             CEEEECGGGCEECSSCSCTTSCBTTEEEEETCEECSSCEEEECSSTTCEEEEEESSCBCCSSEEEEEEEEEECSSSCCCC
T ss_pred             CCccceEEeccCCCcccCCCCCccceEEeeeEEEECCEEEECCCCCCCEEEEEeCCCccccCcEEEEEEeccCCCCCCCC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999987778999


Q ss_pred             eEEEEEecCCCCCCCCcCCCCCCccEEEEEEEccCCCCCCCCCeEEEEecCCcccccCCCCCCcccccceeeccccCCcc
Q psy11306        108 GLAFWYTSEKGSYDGEVFGSSDRWKGLGLFFDSFDNDNNHNNPYIMAVVNDGNMAFDHQNDGASQSLAGCLRDFRNKPYP  187 (413)
Q Consensus       108 GlAFW~t~~~~~~~G~vfG~~~~f~GlaI~FDTf~N~~~~~~P~I~i~~NDGt~~yd~~~DG~~~~L~~C~~~~rn~~~p  187 (413)
                      ||||||+++.+ ..|+.+|+.+.++||||+|||+.|....+.|++.++.|+++..+++.+++....+++|...+++...+
T Consensus        81 G~aF~i~~~~~-~~g~~~G~~~~~~glaVefDt~~n~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (228)
T d1gv9a_          81 GLAIWYTENQG-LDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYP  159 (228)
T ss_dssp             EEEEEEESSCC-CEEEETTECSCCEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHCSEEECCCCBSCSSC
T ss_pred             EEEEEEecCCC-CCCCccCcCCCCceEEEEEEcccccCCCCCCcEEEEecCCcceeeecCCCccccccceeeeecCCceE
Confidence            99999999888 88999999999999999999999987777899999999999988888888888899999989888899


Q ss_pred             eEEEEEEECCEEEEEEEeCccCCCCceeEEEEecccccCCCcEEEEEeeCCCCCccEEEEEEEEeecCC
Q psy11306        188 TRARIQYYMNTLTVWFHNGMTNNEQDIEVCLRVENIYLPKEGYFGVSAATGGLADDHDILHFLTSSLLP  256 (413)
Q Consensus       188 ~~~rI~Y~~~~LsV~v~~~~t~~~~~~~~C~~v~~v~LP~~~yfGfSAaTG~lad~HDIls~~~~sL~~  256 (413)
                      +++++.|..+.|+|.++.........+..|+.+..+.||+.+||||||+||+.++.|+|++|++++|++
T Consensus       160 ~~i~~~~~~~~l~v~i~~~~~~~~~~~~~~~~~~~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~~~l~~  228 (228)
T d1gv9a_         160 VRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTE  228 (228)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCCTTCCEEEEEETTCCCCSSBEEEEEEECCSSCCEEEEEEEEEEEEEC
T ss_pred             EEEEEEecCCEEEEEEeccccCCCcceeEEEEecccccCCCEEEEEEEeCCCCcCeEEEEEEEEEEccC
Confidence            999999999999999998766666778999999999999999999999999999999999999999874
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Back     information, alignment and structure
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Back     information, alignment and structure
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Back     information, alignment and structure
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Back     information, alignment and structure
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Back     information, alignment and structure
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Back     information, alignment and structure
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Back     information, alignment and structure
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Back     information, alignment and structure
>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Back     information, alignment and structure
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Back     information, alignment and structure
>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Back     information, alignment and structure
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Back     information, alignment and structure
>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure