Psyllid ID: psy11727

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------
Protein Sequence
MNNVINAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEccEEcccEEEEccccccccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEEcEEccccEEEEEEccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEcccccccEEEcccccccEEEEEcccccccccEEEEEcccccccccHHHHcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEcccccccccEEcccccccHHHHHHHHHccHHHHcHccccccHccHHHHHccccEEEEcccHcccccccccccccccccccccccccccccccccEEEEcccHHHHHEEEEHHcccccccEEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHcccccccccEEEEEHEEEccccEEEEEHHHcHcHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHEEEcccccccEEEccccHcEEccEccccccccHHHccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHccccHcccccccEEEEEcccccccccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHccHHHHcccccc
Coil and Loop (DISEMBL)
mnnvinagsplygrlvadnsiqnqDILSMqaripmqfrdpatapLRKLSVDLIKTYKHINEVYYTKKKRKAQLshnetrsnkkekkyvhndghddenyDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLirntnfhgvsLNLTKKFAQQLCCALAflsspelsiihcdlkpenillcspkrsaikiidfgsschvgQTLYQYIQSRyyrspevllgipyDLAIDMWSLGCILVElhtgeplfsgkneVDQMTKIIEvlgmppgyllhgasktskyfdrlsdnsyvlkkstdtrkerlpgskrldtilgvdnggpggrrrnepghsladYMKFKDLILRMLtydpkkrisptnvlRHEFFLKHSVDN
Flexible Loop (DISEMBL)
mnnvinagsplyGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINevyytkkkrkaqlshnetrsnkkekkyvhndghddeNYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTskyfdrlsdnsyvlkkstdtrkerlpgskrldtilgvdnggpggrrrnepghslaDYMKFKDLILRMLTYdpkkrisptnvlrHEFFLKHSVDN
Low Complexity Region (SEG)
MNNVINAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDnggpggrrrnepgHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN
Disordered region (IsUnstruct)
**********LYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYT*******************************NYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL**********************************************LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFL******
Disordered Region (DISOPRED)
************************************************SVDLIKTYKHINEVYYTKK************************GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYV******************************************DYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH****
Disordered Region (DISEMBL)
MNNVINAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKK*******************YVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN
Disordered Region (DISPRO)
****INAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRK*****************VHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRR*EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNNVINAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	437	2.2.26 [Sep-21-2011]
P49657	908	Serine/threonine-protein	no	N/A	0.965	0.464	0.703	0.0
Q63470	763	Dual specificity tyrosine	yes	N/A	0.931	0.533	0.709	1e-167
Q61214	763	Dual specificity tyrosine	yes	N/A	0.931	0.533	0.709	1e-167
Q9Z188	629	Dual specificity tyrosine	no	N/A	0.926	0.643	0.681	1e-167
Q13627	763	Dual specificity tyrosine	yes	N/A	0.931	0.533	0.709	1e-167
Q9Y463	629	Dual specificity tyrosine	no	N/A	0.926	0.643	0.681	1e-167
Q2TAE3	750	Dual specificity tyrosine	N/A	N/A	0.938	0.546	0.699	1e-164
Q0IJ08	751	Dual specificity tyrosine	no	N/A	0.938	0.545	0.699	1e-158
Q8WQL7	882	Dual specificity tyrosine	yes	N/A	0.782	0.387	0.657	1e-130
A8X4H1	904	Dual specificity tyrosine	N/A	N/A	0.757	0.366	0.663	1e-128

>sp|P49657|MNB_DROME Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=2 SV=2

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/439 (70%), Positives = 370/439 (84%), Gaps = 17/439 (3%)

Query: 9   SPLYGRLV--ADNSIQNQDIL-------------SMQARIPMQFRDPATAPLRKLSVDLI 53
           +PLYGR V   D    ++D++             +MQARIP  FR+PA+ PLRKLSVDLI
Sbjct: 46  APLYGRFVDAEDLPATHRDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRKLSVDLI 105

Query: 54  KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
           KTYKHINEVYY KKKR+AQ +  +  S+ K+++ ++NDG+DD+N+DYIIK+GEKFLDRYE
Sbjct: 106 KTYKHINEVYYAKKKRRAQQTQGDDDSSNKKERKLYNDGYDDDNHDYIIKNGEKFLDRYE 165

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
           ID+L+GKGSFGQVVKA+DHEE+C VAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 166 IDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 225

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IVKLK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FLS+PE
Sbjct: 226 IVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPE 285

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
           L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +Y YIQSR+YRSPEVLLGI YDL
Sbjct: 286 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDL 345

Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
           AIDMWSLGCILVE+HTGEPLFSG NEVDQM KI+EVLGMPP YLL  A KT K+FD++ +
Sbjct: 346 AIDMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLGMPPKYLLDQAHKTRKFFDKIVA 405

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           D SYVLKK+ + RK + PGS++L  ILGV+ GGPGGRR +EPGHS++DY+KFKDLILRML
Sbjct: 406 DGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLILRML 465

Query: 412 TYDPKKRISPTNVLRHEFF 430
            +DPK R++P   L+H FF
Sbjct: 466 DFDPKTRVTPYYALQHNFF 484

Role in the specific control of proper proliferation of optic lobe neuronal progeny.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|Q63470|DYR1A_RAT Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Rattus norvegicus GN=Dyrk1a PE=1 SV=2

 Score =  589 bits (1518), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/410 (70%), Positives = 349/410 (85%), Gaps = 3/410 (0%)

Query: 25  DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
           DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct: 73  DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query: 85  KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct: 133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
           NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct: 192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
           TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct: 252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct: 312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDN 382
           KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct: 372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWSLKKTKDGKREYKPPGTRKLHNILGVET 431

Query: 383 GGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           GGPGGRR  E GH++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q61214|DYR1A_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1

 Score =  588 bits (1517), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/410 (70%), Positives = 349/410 (85%), Gaps = 3/410 (0%)

Query: 25  DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
           DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct: 73  DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query: 85  KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct: 133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
           NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct: 192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
           TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct: 252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct: 312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDN 382
           KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct: 372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWSLKKTKDGKREYKPPGTRKLHNILGVET 431

Query: 383 GGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           GGPGGRR  E GH++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9Z188|DYR1B_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Mus musculus GN=Dyrk1b PE=1 SV=3

 Score =  588 bits (1517), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 278/408 (68%), Positives = 340/408 (83%), Gaps = 3/408 (0%)

Query: 25  DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
           D+  +  R+P+ FRD A+APLRKLSVDLIKTYKHINEVYY KKKR+AQ +  +  S KKE
Sbjct: 25  DVRLLPRRLPLAFRDAASAPLRKLSVDLIKTYKHINEVYYAKKKRRAQQAPPQDSSTKKE 84

Query: 85  KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           KK V N G+DD+N+DYI++ GE++L+RYEID+L+GKGSFGQVVKA+DH+ +  VAIKIIK
Sbjct: 85  KK-VLNHGYDDDNHDYIVRSGERWLERYEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIK 143

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
           NKK FLNQAQIE++LLE +N+ D   +Y IV LK HF ++NHLCLVFELLSYNLY+L+RN
Sbjct: 144 NKKAFLNQAQIELRLLELMNQHDTEMKYYIVHLKRHFMFRNHLCLVFELLSYNLYDLLRN 203

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
           T+F GVSLNLT+K AQQLC AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct: 204 THFRGVSLNLTRKLAQQLCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 263

Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           C +GQ +YQYIQSR+YRSPEVLLG PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM+
Sbjct: 264 CQLGQRIYQYIQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMS 323

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDN 382
           +I+EVLG+PP  +L  A K  KYF+RL    + L+++ + RK+ + PG++RL  +LGV  
Sbjct: 324 RIVEVLGIPPAPMLEQAPKARKYFERLPGGGWTLRRTKELRKDYQGPGTRRLQEVLGVQT 383

Query: 383 GGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           GGPGGRR  EPGHS ADY++F+DL+LRML Y+P  RISP   L+H FF
Sbjct: 384 GGPGGRRAGEPGHSPADYLRFQDLVLRMLEYEPAARISPLGALQHGFF 431

Dual-specificity kinase which possesses both serine/ threonine and tyrosine kinase activity. Enhances the transcriptional activity of TCF1/HNF1A and FOXO1. Inhibits epithelial cell migration. Mediates colon carcinoma cell survival in mitogen-poor environments.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2

 Score =  588 bits (1516), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/410 (70%), Positives = 349/410 (85%), Gaps = 3/410 (0%)

Query: 25  DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
           DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct: 73  DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query: 85  KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct: 133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
           NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct: 192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
           TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct: 252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct: 312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDN 382
           KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct: 372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVET 431

Query: 383 GGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           GGPGGRR  E GH++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9Y463|DYR1B_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1

 Score =  588 bits (1516), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 278/408 (68%), Positives = 339/408 (83%), Gaps = 3/408 (0%)

Query: 25  DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
           D+  +  R+P+ FRD  +APLRKLSVDLIKTYKHINEVYY KKKR+AQ +  +  SNKKE
Sbjct: 25  DVRLLPRRLPLAFRDATSAPLRKLSVDLIKTYKHINEVYYAKKKRRAQQAPPQDSSNKKE 84

Query: 85  KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           KK V N G+DD+N+DYI++ GE++L+RYEID+L+GKGSFGQVVKA+DH+ +  VAIKIIK
Sbjct: 85  KK-VLNHGYDDDNHDYIVRSGERWLERYEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIK 143

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
           NKK FLNQAQIE++LLE +N+ D   +Y IV LK HF ++NHLCLVFELLSYNLY+L+RN
Sbjct: 144 NKKAFLNQAQIELRLLELMNQHDTEMKYYIVHLKRHFMFRNHLCLVFELLSYNLYDLLRN 203

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
           T+F GVSLNLT+K AQQLC AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct: 204 THFRGVSLNLTRKLAQQLCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 263

Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           C +GQ +YQYIQSR+YRSPEVLLG PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct: 264 CQLGQRIYQYIQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMN 323

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDN 382
           +I+EVLG+PP  +L  A K  KYF+RL    + L+++ + RK+ + PG++RL  +LGV  
Sbjct: 324 RIVEVLGIPPAAMLDQAPKARKYFERLPGGGWTLRRTKELRKDYQGPGTRRLQEVLGVQT 383

Query: 383 GGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           GGPGGRR  EPGHS ADY++F+DL+LRML Y+P  RISP   L+H FF
Sbjct: 384 GGPGGRRAGEPGHSPADYLRFQDLVLRMLEYEPAARISPLGALQHGFF 431

Dual-specificity kinase which possesses both serine/ threonine and tyrosine kinase activities. Enhances the transcriptional activity of TCF1/HNF1A and FOXO1. Inhibits epithelial cell migration. Mediates colon carcinoma cell survival in mitogen-poor environments.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q2TAE3|DYR1A_XENLA Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1

 Score =  579 bits (1493), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 289/413 (69%), Positives = 347/413 (84%), Gaps = 3/413 (0%)

Query: 22  QNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSN 81
           Q    L  Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+
Sbjct: 62  QTPQPLPNQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSH 121

Query: 82  KKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK 141
           KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIK
Sbjct: 122 KKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK 180

Query: 142 IIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNL 200
           IIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L
Sbjct: 181 IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDL 240

Query: 201 IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
           +RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DF
Sbjct: 241 LRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 300

Query: 261 GSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
           GSSC +GQ +YQYIQSR+YRSPEVLLG PYDLAIDMWSLGCILVE+HTGEPLFSG NEVD
Sbjct: 301 GSSCQLGQRIYQYIQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 360

Query: 321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILG 379
           QM+KI+EVLG+PP ++L  A K  K+F+++ + ++ LKK+ D +KE + PG+++L  ILG
Sbjct: 361 QMSKIVEVLGIPPAHILDQAPKARKFFEKMPEGTWNLKKTKDGKKEYKPPGTRKLHNILG 420

Query: 380 VDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           V+NGGPGGRR  E GH++ADY+KFKD+ILRML YD K RI P   L+H FF K
Sbjct: 421 VENGGPGGRRAGESGHTVADYLKFKDVILRMLDYDAKTRIQPYYALQHSFFKK 473

May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q0IJ08|DYR1A_XENTR Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus tropicalis GN=dyrk1a PE=2 SV=1

 Score =  559 bits (1440), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 289/413 (69%), Positives = 348/413 (84%), Gaps = 3/413 (0%)

Query: 22  QNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSN 81
           Q Q  L  Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+
Sbjct: 62  QIQQPLPNQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSH 121

Query: 82  KKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK 141
           KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIK
Sbjct: 122 KKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRAEQEWVAIK 180

Query: 142 IIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNL 200
           IIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L
Sbjct: 181 IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDL 240

Query: 201 IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
           +RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DF
Sbjct: 241 LRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 300

Query: 261 GSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
           GSSC +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVD
Sbjct: 301 GSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 360

Query: 321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILG 379
           QM+KI+EVLG+PP ++L  A K  K+F+++ + ++ LKK+ D +KE + PG+++L  +LG
Sbjct: 361 QMSKIVEVLGIPPAHILDQAPKARKFFEKMPEGTWNLKKTKDGKKEYKPPGTRKLHNLLG 420

Query: 380 VDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           V+ GGPGGRR  E GH++ADY+KFKDLILRML YD K RI P   L+H FF K
Sbjct: 421 VETGGPGGRRGGESGHTVADYLKFKDLILRMLDYDAKTRIQPYYALQHSFFKK 473

May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q8WQL7|MBK1_CAEEL Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1

 Score =  465 bits (1197), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 228/347 (65%), Positives = 270/347 (77%), Gaps = 5/347 (1%)

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK 146
           +N+G+DD+NYDYI+K+GE F  RY I  DT +GKGSFGQV KA+D   K +VAIKIIKNK
Sbjct: 303 YNNGYDDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTLNKEEVAIKIIKNK 362

Query: 147 KPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN 205
           K F +QAQIE+ LLE  N  D  ++Y IV LKGHF  + HLCLVFELLSYNLY+L++NT+
Sbjct: 363 KTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTS 422

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
           F GVSLNL +KFAQQL   L FLSSPELSIIHCDLKPEN+LL + KRS I++IDFGSSC 
Sbjct: 423 FRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVNAKRSQIRVIDFGSSCQ 482

Query: 266 VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            G  +YQYIQSR+YRSPEVLLGI YD  IDMWSLGCILVE+HTGEPLF+G +EVDQM KI
Sbjct: 483 TGHRIYQYIQSRFYRSPEVLLGIAYDTKIDMWSLGCILVEMHTGEPLFAGSSEVDQMMKI 542

Query: 326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE--RLPGSKRLDTILGVDNG 383
           +EVLGMPP  +L    KT KYFD+  D  Y  KK+ D  +   + PG+++L  ILGV +G
Sbjct: 543 VEVLGMPPKEMLDIGPKTHKYFDKTEDGIYYCKKTRDGYRHTYKAPGARKLHEILGVTSG 602

Query: 384 GPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           GPGGRR  EPGHS+ DY KFKDLI RML +DPK+RISP  V+RH F 
Sbjct: 603 GPGGRRLGEPGHSVEDYSKFKDLIKRMLQFDPKQRISPYYVVRHPFL 649

Possible role in the function of olfactory neurons.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|A8X4H1|MBK1_CAEBR Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2

 Score =  457 bits (1177), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/336 (66%), Positives = 263/336 (78%), Gaps = 5/336 (1%)

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK 146
           +N+G+DD+NYDYI+K+GE F  RY I  DT +GKGSFGQV KA+D   K +VAIKIIKNK
Sbjct: 342 YNNGYDDQNYDYILKNGEIFDKRYVILSDTPVGKGSFGQVTKAYDTVTKEEVAIKIIKNK 401

Query: 147 KPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN 205
           K F +QAQIE+ LLE  N  D  ++Y IV LKGHF  + HLCLVFELLSYNLY+L++NTN
Sbjct: 402 KTFFDQAQIEIHLLELTNAHDKDNKYNIVTLKGHFVHRAHLCLVFELLSYNLYDLLKNTN 461

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
           F GVSLNL +KFAQQL   L FLSSPELSIIHCDLKPEN+LL + KRS I++IDFGSSC 
Sbjct: 462 FRGVSLNLARKFAQQLGKTLLFLSSPELSIIHCDLKPENVLLVNAKRSQIRVIDFGSSCQ 521

Query: 266 VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            G  +YQYIQSR+YRSPEVLLGI YD  IDMWSLGCILVE+HTGEPLF+G +EVDQM KI
Sbjct: 522 TGHRIYQYIQSRFYRSPEVLLGIAYDTKIDMWSLGCILVEMHTGEPLFAGSSEVDQMMKI 581

Query: 326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE--RLPGSKRLDTILGVDNG 383
           +EVLGMPP  +L    KT KYFD+  D  Y  KK+ D  +   + PG+++L  ILGV +G
Sbjct: 582 VEVLGMPPKEMLDIGPKTHKYFDKTEDGIYYCKKTRDGYRHTYKAPGARKLHEILGVTSG 641

Query: 384 GPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI 419
           GPGGRR  EPGHS+ DY KFKDLI RML +DPK+RI
Sbjct: 642 GPGGRRLGEPGHSVEDYSKFKDLIKRMLNFDPKQRI 677

Possible role in the function of olfactory neurons.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
347967212	1483	AGAP002119-PB [Anopheles gambiae str. PE	0.972	0.286	0.717	0.0
347967214	928	AGAP002119-PA [Anopheles gambiae str. PE	0.972	0.457	0.717	0.0
347967216	1263	AGAP002119-PD [Anopheles gambiae str. PE	0.972	0.336	0.717	0.0
242012319	540	serine/threonine-protein kinase minibrai	0.970	0.785	0.737	0.0
347967218	708	AGAP002119-PC [Anopheles gambiae str. PE	0.972	0.600	0.717	0.0
156543834	706	PREDICTED: serine/threonine-protein kina	0.974	0.603	0.714	0.0
157136011	508	Dual specificity tyrosine-phosphorylatio	0.972	0.836	0.705	0.0
195041543	846	GH12565 [Drosophila grimshawi] gi|193901	0.965	0.498	0.703	0.0
328793644	704	PREDICTED: serine/threonine-protein kina	0.961	0.596	0.722	0.0
340710082	695	PREDICTED: serine/threonine-protein kina	0.961	0.604	0.722	0.0

>gi|347967212|ref|XP_003436034.1| AGAP002119-PB [Anopheles gambiae str. PEST] gi|333469706|gb|EGK97377.1| AGAP002119-PB [Anopheles gambiae str. PEST]

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/443 (71%), Positives = 376/443 (84%), Gaps = 18/443 (4%)

Query: 9    SPLYGRLVAD---------------NSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLI 53
            +PLYGRLV +               +   + DI +M+ARIP+ FRDPATAPLRKLSVDLI
Sbjct: 585  APLYGRLVTEEHLPAVHRDIHQRSISPTSSTDIRAMEARIPVLFRDPATAPLRKLSVDLI 644

Query: 54   KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
            KTYKHINEVYY KKKR+AQ +  E  S+KKE+K ++NDG+DDEN+DYIIK+GEKFLDRYE
Sbjct: 645  KTYKHINEVYYAKKKRRAQQTQGEDTSHKKERK-LYNDGYDDENHDYIIKNGEKFLDRYE 703

Query: 114  IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
            ID+L+GKGSFGQVVKAFDHEE+CQVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 704  IDSLIGKGSFGQVVKAFDHEERCQVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 763

Query: 173  IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            IVKLK HF W+NHLCLVFELLSYNL++L+RNTNF GVSLNLTKKFAQQLC AL FLS+PE
Sbjct: 764  IVKLKRHFMWRNHLCLVFELLSYNLFDLLRNTNFRGVSLNLTKKFAQQLCTALLFLSTPE 823

Query: 233  LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
            L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDL
Sbjct: 824  LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 883

Query: 293  AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
            AIDMWSLGCILVE+HTGEPLFSG NE DQ+ +I+EVLGMPP ++L  A KT K+F++L S
Sbjct: 884  AIDMWSLGCILVEMHTGEPLFSGSNEADQINRIVEVLGMPPKHILDQAHKTRKFFEKLPS 943

Query: 352  DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
            D SYVL+K+ + RK + PGS++L  ILGV+ GGPGGRR  EPGHS++DY+KFKDLILRML
Sbjct: 944  DGSYVLRKTQNQRKYKPPGSRKLHDILGVETGGPGGRRHGEPGHSVSDYLKFKDLILRML 1003

Query: 412  TYDPKKRISPTNVLRHEFFLKHS 434
             YDPK R++P   L+H FF + S
Sbjct: 1004 DYDPKTRVTPYYALQHNFFKRTS 1026

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967214|ref|XP_320918.5| AGAP002119-PA [Anopheles gambiae str. PEST] gi|333469705|gb|EAA43038.5| AGAP002119-PA [Anopheles gambiae str. PEST]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/443 (71%), Positives = 376/443 (84%), Gaps = 18/443 (4%)

Query: 9   SPLYGRLVADNSI---------------QNQDILSMQARIPMQFRDPATAPLRKLSVDLI 53
           +PLYGRLV +  +                + DI +M+ARIP+ FRDPATAPLRKLSVDLI
Sbjct: 30  APLYGRLVTEEHLPAVHRDIHQRSISPTSSTDIRAMEARIPVLFRDPATAPLRKLSVDLI 89

Query: 54  KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
           KTYKHINEVYY KKKR+AQ +  E  S+KKE+K ++NDG+DDEN+DYIIK+GEKFLDRYE
Sbjct: 90  KTYKHINEVYYAKKKRRAQQTQGEDTSHKKERK-LYNDGYDDENHDYIIKNGEKFLDRYE 148

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
           ID+L+GKGSFGQVVKAFDHEE+CQVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 149 IDSLIGKGSFGQVVKAFDHEERCQVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 208

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IVKLK HF W+NHLCLVFELLSYNL++L+RNTNF GVSLNLTKKFAQQLC AL FLS+PE
Sbjct: 209 IVKLKRHFMWRNHLCLVFELLSYNLFDLLRNTNFRGVSLNLTKKFAQQLCTALLFLSTPE 268

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
           L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDL
Sbjct: 269 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 328

Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
           AIDMWSLGCILVE+HTGEPLFSG NE DQ+ +I+EVLGMPP ++L  A KT K+F++L S
Sbjct: 329 AIDMWSLGCILVEMHTGEPLFSGSNEADQINRIVEVLGMPPKHILDQAHKTRKFFEKLPS 388

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           D SYVL+K+ + RK + PGS++L  ILGV+ GGPGGRR  EPGHS++DY+KFKDLILRML
Sbjct: 389 DGSYVLRKTQNQRKYKPPGSRKLHDILGVETGGPGGRRHGEPGHSVSDYLKFKDLILRML 448

Query: 412 TYDPKKRISPTNVLRHEFFLKHS 434
            YDPK R++P   L+H FF + S
Sbjct: 449 DYDPKTRVTPYYALQHNFFKRTS 471

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967216|ref|XP_003436035.1| AGAP002119-PD [Anopheles gambiae str. PEST] gi|333469708|gb|EGK97379.1| AGAP002119-PD [Anopheles gambiae str. PEST]

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/443 (71%), Positives = 376/443 (84%), Gaps = 18/443 (4%)

Query: 9    SPLYGRLVADNSI---------------QNQDILSMQARIPMQFRDPATAPLRKLSVDLI 53
            +PLYGRLV +  +                + DI +M+ARIP+ FRDPATAPLRKLSVDLI
Sbjct: 585  APLYGRLVTEEHLPAVHRDIHQRSISPTSSTDIRAMEARIPVLFRDPATAPLRKLSVDLI 644

Query: 54   KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
            KTYKHINEVYY KKKR+AQ +  E  S+KKE+K ++NDG+DDEN+DYIIK+GEKFLDRYE
Sbjct: 645  KTYKHINEVYYAKKKRRAQQTQGEDTSHKKERK-LYNDGYDDENHDYIIKNGEKFLDRYE 703

Query: 114  IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
            ID+L+GKGSFGQVVKAFDHEE+CQVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 704  IDSLIGKGSFGQVVKAFDHEERCQVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 763

Query: 173  IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            IVKLK HF W+NHLCLVFELLSYNL++L+RNTNF GVSLNLTKKFAQQLC AL FLS+PE
Sbjct: 764  IVKLKRHFMWRNHLCLVFELLSYNLFDLLRNTNFRGVSLNLTKKFAQQLCTALLFLSTPE 823

Query: 233  LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
            L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDL
Sbjct: 824  LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 883

Query: 293  AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
            AIDMWSLGCILVE+HTGEPLFSG NE DQ+ +I+EVLGMPP ++L  A KT K+F++L S
Sbjct: 884  AIDMWSLGCILVEMHTGEPLFSGSNEADQINRIVEVLGMPPKHILDQAHKTRKFFEKLPS 943

Query: 352  DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
            D SYVL+K+ + RK + PGS++L  ILGV+ GGPGGRR  EPGHS++DY+KFKDLILRML
Sbjct: 944  DGSYVLRKTQNQRKYKPPGSRKLHDILGVETGGPGGRRHGEPGHSVSDYLKFKDLILRML 1003

Query: 412  TYDPKKRISPTNVLRHEFFLKHS 434
             YDPK R++P   L+H FF + S
Sbjct: 1004 DYDPKTRVTPYYALQHNFFKRTS 1026

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012319|ref|XP_002426880.1| serine/threonine-protein kinase minibrain, putative [Pediculus humanus corporis] gi|212511109|gb|EEB14142.1| serine/threonine-protein kinase minibrain, putative [Pediculus humanus corporis]

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/431 (73%), Positives = 371/431 (86%), Gaps = 7/431 (1%)

Query: 10  PLYGRLVADNSIQN----QDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYT 65
           PLYGRLV +  ++      DI +MQARIP  FRDP++APLRKLSVDLIKTYKHINEVYY 
Sbjct: 38  PLYGRLVGEEQLETIREPADIQAMQARIPQHFRDPSSAPLRKLSVDLIKTYKHINEVYYA 97

Query: 66  KKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQ 125
           KKKR+AQ +  E  S+KKE+K + N+G+DD+N+DYIIK+GEKFLDRYEID L+GKGSFGQ
Sbjct: 98  KKKRRAQQTQGEDTSHKKERK-IFNEGYDDDNHDYIIKNGEKFLDRYEIDNLIGKGSFGQ 156

Query: 126 VVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKN 184
           VVKA+DHEE+CQVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y IV+LK HF W+N
Sbjct: 157 VVKAYDHEEQCQVAIKIIKNKKPFLNQAQIEVKLLEMMNRADADNKYFIVRLKRHFMWRN 216

Query: 185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
           HLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FLS+PEL+IIHCDLKPEN
Sbjct: 217 HLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPEN 276

Query: 245 ILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILV 304
           ILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDLAIDMWSLGCILV
Sbjct: 277 ILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDLAIDMWSLGCILV 336

Query: 305 ELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-SDNSYVLKKSTDT 363
           E+HTGEPLFSG NEVDQM KIIEVLGMPP ++L  A K  KYFD+L SD SYVLK+  D 
Sbjct: 337 EMHTGEPLFSGTNEVDQMNKIIEVLGMPPKHILDQAHKARKYFDKLPSDGSYVLKRPKDG 396

Query: 364 RKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN 423
           +K R PG++RL  ILGVD+GGPGGRR  EPGH++ADY+KFKDLILRML +DPK R++P  
Sbjct: 397 KKYRSPGTRRLHDILGVDSGGPGGRRLGEPGHTVADYLKFKDLILRMLDFDPKTRVTPYY 456

Query: 424 VLRHEFFLKHS 434
            L+  FF + S
Sbjct: 457 ALQQNFFKRTS 467

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967218|ref|XP_003436036.1| AGAP002119-PC [Anopheles gambiae str. PEST] gi|333469707|gb|EGK97378.1| AGAP002119-PC [Anopheles gambiae str. PEST]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/443 (71%), Positives = 376/443 (84%), Gaps = 18/443 (4%)

Query: 9   SPLYGRLVADNSI---------------QNQDILSMQARIPMQFRDPATAPLRKLSVDLI 53
           +PLYGRLV +  +                + DI +M+ARIP+ FRDPATAPLRKLSVDLI
Sbjct: 30  APLYGRLVTEEHLPAVHRDIHQRSISPTSSTDIRAMEARIPVLFRDPATAPLRKLSVDLI 89

Query: 54  KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
           KTYKHINEVYY KKKR+AQ +  E  S+KKE+K ++NDG+DDEN+DYIIK+GEKFLDRYE
Sbjct: 90  KTYKHINEVYYAKKKRRAQQTQGEDTSHKKERK-LYNDGYDDENHDYIIKNGEKFLDRYE 148

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
           ID+L+GKGSFGQVVKAFDHEE+CQVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 149 IDSLIGKGSFGQVVKAFDHEERCQVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 208

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IVKLK HF W+NHLCLVFELLSYNL++L+RNTNF GVSLNLTKKFAQQLC AL FLS+PE
Sbjct: 209 IVKLKRHFMWRNHLCLVFELLSYNLFDLLRNTNFRGVSLNLTKKFAQQLCTALLFLSTPE 268

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
           L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDL
Sbjct: 269 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 328

Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
           AIDMWSLGCILVE+HTGEPLFSG NE DQ+ +I+EVLGMPP ++L  A KT K+F++L S
Sbjct: 329 AIDMWSLGCILVEMHTGEPLFSGSNEADQINRIVEVLGMPPKHILDQAHKTRKFFEKLPS 388

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           D SYVL+K+ + RK + PGS++L  ILGV+ GGPGGRR  EPGHS++DY+KFKDLILRML
Sbjct: 389 DGSYVLRKTQNQRKYKPPGSRKLHDILGVETGGPGGRRHGEPGHSVSDYLKFKDLILRML 448

Query: 412 TYDPKKRISPTNVLRHEFFLKHS 434
            YDPK R++P   L+H FF + S
Sbjct: 449 DYDPKTRVTPYYALQHNFFKRTS 471

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156543834|ref|XP_001606660.1| PREDICTED: serine/threonine-protein kinase minibrain-like [Nasonia vitripennis]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/449 (71%), Positives = 374/449 (83%), Gaps = 23/449 (5%)

Query: 4   VINAGSPLYGRLVADNSIQN--------------------QDILSMQARIPMQFRDPATA 43
            +  G+PLYGRLVA+  +                       DI +MQARIP +FRDPATA
Sbjct: 61  TVTGGAPLYGRLVAEEPLPGAVCGAGGTGGGSGVMPQETPADIHAMQARIPHRFRDPATA 120

Query: 44  PLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIK 103
           PLRKLSVDLIKTYKHINEVYY KKKR+AQ    E  S+KKE+K ++NDG DD+N+DYIIK
Sbjct: 121 PLRKLSVDLIKTYKHINEVYYAKKKRRAQQMQGEDGSHKKERK-LYNDGWDDDNHDYIIK 179

Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
           +GEKFLDRYEID+L+GKGSFGQVVKAFDHEE+ QVAIKIIKNKKPFLNQAQIEV+LLE +
Sbjct: 180 NGEKFLDRYEIDSLIGKGSFGQVVKAFDHEEQTQVAIKIIKNKKPFLNQAQIEVRLLEMM 239

Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           N+AD  ++Y IVKLK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC
Sbjct: 240 NRADTDNKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLC 299

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSP 282
            AL FLS+PEL+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSP
Sbjct: 300 TALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSP 359

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           EVLLGIPYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM KI+EVLGMPP ++L  A K
Sbjct: 360 EVLLGIPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGMPPKHILDQAHK 419

Query: 343 TSKYFDRL-SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM 401
             KYFD++ +D SYVLKKS + +K +LPG++RL  ILGV+ GGPGGRR  EPGHS++DY+
Sbjct: 420 ARKYFDKVPTDGSYVLKKSKEGKKYKLPGTRRLHDILGVETGGPGGRRHGEPGHSISDYL 479

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           KFKDLILRML +DPK R++P   L+H FF
Sbjct: 480 KFKDLILRMLDFDPKTRVTPYYALQHNFF 508

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136011|ref|XP_001656726.1| Dual specificity tyrosine-phosphorylation-regulated kinase [Aedes aegypti] gi|108881094|gb|EAT45319.1| AAEL003370-PA [Aedes aegypti]

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/442 (70%), Positives = 370/442 (83%), Gaps = 17/442 (3%)

Query: 9   SPLYGRLVADNSI---------------QNQDILSMQARIPMQFRDPATAPLRKLSVDLI 53
           +PLYGRLV +  +                + DI +MQARIP  FRDP TAPLRKLSVDLI
Sbjct: 30  APLYGRLVTEEHLPAAHRDIHQRSISPTSSTDIRAMQARIPSHFRDPTTAPLRKLSVDLI 89

Query: 54  KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
           KTYKHINEVYY KKKR+AQ +  E  S+KKE+K ++NDG+DDEN+DYIIK+GEKFLDRYE
Sbjct: 90  KTYKHINEVYYAKKKRRAQQTQGEDTSHKKERK-LYNDGYDDENHDYIIKNGEKFLDRYE 148

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
           ID+L+GKGSFGQVVKA+DHEE+CQVAIKIIKNK+PFL+QAQIEV LLE +N+AD  ++Y 
Sbjct: 149 IDSLIGKGSFGQVVKAYDHEEECQVAIKIIKNKRPFLSQAQIEVNLLEMMNRADAENKYY 208

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IV+LK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FLSS E
Sbjct: 209 IVRLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSSQE 268

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
           L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGIPYDL
Sbjct: 269 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIPYDL 328

Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSD 352
           AIDMWSLGCILVE+HTGEPLFSG NE DQ+ KI+EVLGMPP ++L  A KT K+F++L D
Sbjct: 329 AIDMWSLGCILVEMHTGEPLFSGSNEADQINKIVEVLGMPPKHILDQAHKTRKFFEKLPD 388

Query: 353 NSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT 412
            +YVL+K+ + RK + PG+++L  ILGV+ GGPGGRR  EPGHS++DY+KFKDLILRML 
Sbjct: 389 GTYVLRKTQNQRKYKAPGTRKLHDILGVETGGPGGRRHGEPGHSVSDYLKFKDLILRMLD 448

Query: 413 YDPKKRISPTNVLRHEFFLKHS 434
           YDPK R +P   L+H FF + S
Sbjct: 449 YDPKTRCTPYYALQHNFFKRTS 470

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195041543|ref|XP_001991277.1| GH12565 [Drosophila grimshawi] gi|193901035|gb|EDV99901.1| GH12565 [Drosophila grimshawi]

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/439 (70%), Positives = 370/439 (84%), Gaps = 17/439 (3%)

Query: 9   SPLYGRLVADNSI--QNQDIL-------------SMQARIPMQFRDPATAPLRKLSVDLI 53
           +PLYGR V +  +   ++D++             +MQARIP  FRDPA APLRKLSV+LI
Sbjct: 47  APLYGRFVVEEELPATHRDVMHHHSSPSSSSEVRAMQARIPTHFRDPAAAPLRKLSVELI 106

Query: 54  KTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYE 113
           KTYKHINEVYY KKKR+AQ +  +  S+ K+++ ++NDG+DD+N+DYIIK+GEKFLDRYE
Sbjct: 107 KTYKHINEVYYAKKKRRAQQTQGDDDSSNKKERKLYNDGYDDDNHDYIIKNGEKFLDRYE 166

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY- 172
           ID+L+GKGSFGQVVKA+DHEE+C VAIKIIKNKKPFLNQAQIEV+LLE +N+AD  ++Y 
Sbjct: 167 IDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKYY 226

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IVKLK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FLS+PE
Sbjct: 227 IVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPE 286

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDL 292
           L+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGI YDL
Sbjct: 287 LNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGIQYDL 346

Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL-S 351
           AIDMWSLGCILVE+HTGEPLFSG NE DQM KI+EVLGMPP YLL  A KT K+FD++ +
Sbjct: 347 AIDMWSLGCILVEMHTGEPLFSGCNEFDQMNKIVEVLGMPPKYLLDQAHKTRKFFDKIVT 406

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           D SYVLKK+ + RK + PGS++L  ILGV+ GGP GRR +EPGHS+ADY+KFKDLILRML
Sbjct: 407 DGSYVLKKTLNGRKYKPPGSRKLHDILGVETGGPAGRRLDEPGHSVADYLKFKDLILRML 466

Query: 412 TYDPKKRISPTNVLRHEFF 430
            +DPK R++P   L+H FF
Sbjct: 467 DFDPKTRVTPYYALQHNFF 485

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793644|ref|XP_392636.3| PREDICTED: serine/threonine-protein kinase minibrain-like isoform 1, partial [Apis mellifera]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/443 (72%), Positives = 371/443 (83%), Gaps = 23/443 (5%)

Query: 10  PLYGRLVADNSI--------------------QNQDILSMQARIPMQFRDPATAPLRKLS 49
           PLYGRLVA+  +                       DI +MQARIP +FRDPATAPLRKLS
Sbjct: 80  PLYGRLVAEEPLPPTVCGGTGTGGGTGGIPQETPADIHAMQARIPHRFRDPATAPLRKLS 139

Query: 50  VDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFL 109
           VDLIKTYKHINEVYY KKKR+AQ    E  S+KKE+K ++NDG DD+N+DYIIK+GEKFL
Sbjct: 140 VDLIKTYKHINEVYYAKKKRRAQQMQGEDGSHKKERK-LYNDGWDDDNHDYIIKNGEKFL 198

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYEID+L+GKGSFGQVVKAFDHEE+ QVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  
Sbjct: 199 DRYEIDSLIGKGSFGQVVKAFDHEEQTQVAIKIIKNKKPFLNQAQIEVRLLEMMNRADTD 258

Query: 170 SRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           ++Y IVKLK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FL
Sbjct: 259 NKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFL 318

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI 288
           S+PEL+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGI
Sbjct: 319 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGI 378

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFD 348
           PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM KI+EVLGMPP ++L  A K  KYFD
Sbjct: 379 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGMPPKHILDQAHKARKYFD 438

Query: 349 RL-SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI 407
           ++ +D SYVLKKS D +K + PG++RL  ILGV++GGPGGRR  EPGHS++DY+KFKDLI
Sbjct: 439 KVPTDGSYVLKKSKDGKKYKPPGTRRLHDILGVESGGPGGRRIGEPGHSISDYLKFKDLI 498

Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
           LRML +DPK R++P   L+H FF
Sbjct: 499 LRMLDFDPKTRVTPYYALQHNFF 521

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710082|ref|XP_003393627.1| PREDICTED: serine/threonine-protein kinase minibrain-like [Bombus terrestris]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/443 (72%), Positives = 371/443 (83%), Gaps = 23/443 (5%)

Query: 10  PLYGRLVADNSI--------------------QNQDILSMQARIPMQFRDPATAPLRKLS 49
           PLYGRLVA+  +                       DI +MQARIP +FRDPATAPLRKLS
Sbjct: 71  PLYGRLVAEEPLPPTVCGGAGTGGGTGGVPQETPADIHAMQARIPHRFRDPATAPLRKLS 130

Query: 50  VDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFL 109
           VDLIKTYKHINEVYY KKKR+AQ    E  S+KKE+K ++NDG DD+N+DYIIK+GEKFL
Sbjct: 131 VDLIKTYKHINEVYYAKKKRRAQQMQGEDGSHKKERK-LYNDGWDDDNHDYIIKNGEKFL 189

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYEID+L+GKGSFGQVVKAFDHEE+ QVAIKIIKNKKPFLNQAQIEV+LLE +N+AD  
Sbjct: 190 DRYEIDSLIGKGSFGQVVKAFDHEEQTQVAIKIIKNKKPFLNQAQIEVRLLEMMNRADTD 249

Query: 170 SRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           ++Y IVKLK HF W+NHLCLVFELLSYNLY+L+RNTNF GVSLNLT+KFAQQLC AL FL
Sbjct: 250 NKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFL 309

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI 288
           S+PEL+IIHCDLKPENILLC+PKRSAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLGI
Sbjct: 310 STPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGI 369

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFD 348
           PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM KI+EVLGMPP ++L  A K  KYFD
Sbjct: 370 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGMPPKHILDQAHKARKYFD 429

Query: 349 RL-SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI 407
           ++ +D SYVLKKS D +K + PG++RL  ILGV++GGPGGRR  EPGHS++DY+KFKDLI
Sbjct: 430 KVPTDGSYVLKKSKDGKKYKPPGTRRLHDILGVESGGPGGRRIGEPGHSISDYLKFKDLI 489

Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
           LRML +DPK R++P   L+H FF
Sbjct: 490 LRMLDFDPKTRVTPYYALQHNFF 512

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	437
FB|FBgn0259168	908	mnb "minibrain" [Drosophila me	0.942	0.453	0.712	3.6e-160
ZFIN|ZDB-GENE-060503-499	751	dyrk1b "dual-specificity tyros	0.951	0.553	0.694	1.5e-154
UNIPROTKB|F1N2J2	763	DYRK1A "Uncharacterized protei	0.931	0.533	0.687	9.5e-153
MGI|MGI:1330299	763	Dyrk1a "dual-specificity tyros	0.931	0.533	0.687	9.5e-153
RGD|2528	763	Dyrk1a "dual-specificity tyros	0.931	0.533	0.687	9.5e-153
UNIPROTKB|F8W9I9	541	DYRK1A "Dual-specificity tyros	0.931	0.752	0.687	1.2e-152
UNIPROTKB|Q13627	763	DYRK1A "Dual specificity tyros	0.931	0.533	0.687	1.2e-152
UNIPROTKB|E2R722	654	DYRK1A "Uncharacterized protei	0.931	0.622	0.685	5.2e-152
UNIPROTKB|I3L9V1	764	LOC100625240 "Uncharacterized	0.931	0.532	0.685	5.2e-152
UNIPROTKB|F1P0S9	756	DYRK1A "Uncharacterized protei	0.933	0.539	0.686	6.7e-152

FB|FBgn0259168 mnb "minibrain" [Drosophila melanogaster (taxid:7227)]

 Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
 Identities = 297/417 (71%), Positives = 354/417 (84%)

Query:    23 NQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSH-NETRSN 81
             + ++ +MQARIP  FR+PA+ PLRKLSVDLIKTYKHINEVYY KKKR+AQ +  ++  SN
Sbjct:    75 SSEVRAMQARIPNHFREPASGPLRKLSVDLIKTYKHINEVYYAKKKRRAQQTQGDDDSSN 134

Query:    82 KKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK 141
             KKE+K ++NDG+DD+N+DYIIK+GEKFLDRYEID+L+GKGSFGQVVKA+DHEE+C VAIK
Sbjct:   135 KKERK-LYNDGYDDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIK 193

Query:   142 IIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNL 200
             IIKNKKPFLNQAQIEV+LLE +N+AD  ++Y IVKLK HF W+NHLCLVFELLSYNLY+L
Sbjct:   194 IIKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDL 253

Query:   201 IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
             +RNTNF GVSLNLT+KFAQQLC AL FLS+PEL+IIHCDLKPENILLC+PKRSAIKI+DF
Sbjct:   254 LRNTNFRGVSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDF 313

Query:   261 GSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
             GSSC +GQ +Y YIQSR+YRSPEVLLGI YDLAIDMWSLGCILVE+HTGEPLFSG NEVD
Sbjct:   314 GSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCNEVD 373

Query:   321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRL-SDNSYVLKKSTDTRKERLPGSKRLDTILG 379
             QM KI+EVLGMPP YLL  A KT K+FD++ +D SYVLKK+ + RK + PGS++L  ILG
Sbjct:   374 QMNKIVEVLGMPPKYLLDQAHKTRKFFDKIVADGSYVLKKNQNGRKYKPPGSRKLHDILG 433

Query:   380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD 436
             V+             HS++DY+KFKDLILRML +DPK R++P   L+H FF K + D
Sbjct:   434 VETGGPGGRRLDEPGHSVSDYLKFKDLILRMLDFDPKTRVTPYYALQHNFF-KRTAD 489

GO:0007420 "brain development" evidence=NAS;IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IGI

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;NAS

GO:0007632 "visual behavior" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0007611 "learning or memory" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-060503-499 dyrk1b "dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B" [Danio rerio (taxid:7955)]

 Score = 1507 (535.5 bits), Expect = 1.5e-154, P = 1.5e-154
 Identities = 291/419 (69%), Positives = 342/419 (81%)

Query:    16 VADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSH 75
             +AD      D+  +Q RIP  FRDPA+APLRKLSVDLIKTYKHINEVYYTKKKR+AQ   
Sbjct:    16 MADQQQVLSDMTILQRRIPPSFRDPASAPLRKLSVDLIKTYKHINEVYYTKKKRRAQQVP 75

Query:    76 NETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK 135
              E  S KKE+K V+NDG+DD+NYDYI+K+GEK+LDRYEID+L+GKGSFGQVVKA+DH E+
Sbjct:    76 PEDSSTKKERK-VYNDGYDDDNYDYIVKNGEKWLDRYEIDSLIGKGSFGQVVKAYDHHEQ 134

Query:   136 CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLS 194
               VAIKIIKNKK FLNQAQIE++LLE +NK D   +Y IV LK HF ++NHLCLVFELLS
Sbjct:   135 EWVAIKIIKNKKAFLNQAQIELRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFELLS 194

Query:   195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA 254
             YNLY+L+RNTNF GVSLNLT+KFAQQLC AL FL++PELSIIHCDLKPENILLC+PKRSA
Sbjct:   195 YNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLATPELSIIHCDLKPENILLCNPKRSA 254

Query:   255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
             IKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFS
Sbjct:   255 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 314

Query:   315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKR 373
             G NEVDQM KI+EVLG+PP ++L  A K  KYFD+LSD  + +KK+ D +KE + P ++R
Sbjct:   315 GSNEVDQMNKIVEVLGVPPNHMLDQAPKARKYFDKLSDGLWTVKKNKDIKKEYKPPATRR 374

Query:   374 LDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
             L  ILGV+             H+  DY+KFKDLILRML YDPK RI+P   L+H FF K
Sbjct:   375 LHEILGVETGGPGGRRAGEQGHAPCDYLKFKDLILRMLDYDPKTRITPFYALQHNFFKK 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0001706 "endoderm formation" evidence=IMP

UNIPROTKB|F1N2J2 DYRK1A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
 Identities = 282/410 (68%), Positives = 340/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKSRIQPYYALQHSFFKK 481

GO:0090312 "positive regulation of protein deacetylation" evidence=IEA

GO:0048156 "tau protein binding" evidence=IEA

GO:0043621 "protein self-association" evidence=IEA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:1330299 Dyrk1a "dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a" [Mus musculus (taxid:10090)]

 Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
 Identities = 282/410 (68%), Positives = 340/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWSLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005730 "nucleolus" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016607 "nuclear speck" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0030529 "ribonucleoprotein complex" evidence=IDA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IDA

GO:0043621 "protein self-association" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048156 "tau protein binding" evidence=IPI

GO:0090312 "positive regulation of protein deacetylation" evidence=IDA

RGD|2528 Dyrk1a "dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A" [Rattus norvegicus (taxid:10116)]

 Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
 Identities = 282/410 (68%), Positives = 340/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWSLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007399 "nervous system development" evidence=TAS

GO:0016607 "nuclear speck" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO;IDA

GO:0030100 "regulation of endocytosis" evidence=TAS

GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IEA;ISO

GO:0043621 "protein self-association" evidence=ISO;ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0048156 "tau protein binding" evidence=IEA;ISO

GO:0090312 "positive regulation of protein deacetylation" evidence=IEA;ISO

UNIPROTKB|F8W9I9 DYRK1A "Dual-specificity tyrosine-phosphorylation-regulated kinase 1A" [Homo sapiens (taxid:9606)]

 Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
 Identities = 282/410 (68%), Positives = 340/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q13627 DYRK1A "Dual specificity tyrosine-phosphorylation-regulated kinase 1A" [Homo sapiens (taxid:9606)]

 Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
 Identities = 282/410 (68%), Positives = 340/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0016607 "nuclear speck" evidence=ISS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISS;IDA

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0007623 "circadian rhythm" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0043621 "protein self-association" evidence=ISS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0007399 "nervous system development" evidence=TAS

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=ISS

GO:0090312 "positive regulation of protein deacetylation" evidence=ISS

GO:0048156 "tau protein binding" evidence=ISS

UNIPROTKB|E2R722 DYRK1A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
 Identities = 281/410 (68%), Positives = 339/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVL +PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+ 
Sbjct:   372 KIVEVLSIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|I3L9V1 LOC100625240 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
 Identities = 281/410 (68%), Positives = 339/410 (82%)

Query:    25 DILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKE 84
             DI+ +Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KKE
Sbjct:    73 DIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKKE 132

Query:    85 KKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
             +K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKIIK
Sbjct:   133 RK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 191

Query:   145 NKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRN 203
             NKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+RN
Sbjct:   192 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN 251

Query:   204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
             TNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGSS
Sbjct:   252 TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 311

Query:   264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
             C +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM 
Sbjct:   312 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMN 371

Query:   324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVDX 382
             KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + P +++L  ILGV+ 
Sbjct:   372 KIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPATRKLHNILGVET 431

Query:   383 XXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                         H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   432 GGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1P0S9 DYRK1A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
 Identities = 282/411 (68%), Positives = 339/411 (82%)

Query:    24 QDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKK 83
             Q  L+ Q R+P  FRDPATAPLRKLSVDLIKTYKHINEVYY KKKR+ Q    +  S+KK
Sbjct:    64 QQPLTNQRRMPQTFRDPATAPLRKLSVDLIKTYKHINEVYYAKKKRRHQQGQGDDSSHKK 123

Query:    84 EKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII 143
             E+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VAIKII
Sbjct:   124 ERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 182

Query:   144 KNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIR 202
             KNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY+L+R
Sbjct:   183 KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR 242

Query:   203 NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS 262
             NTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+DFGS
Sbjct:   243 NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 302

Query:   263 SCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQM 322
             SC +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NEVDQM
Sbjct:   303 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM 362

Query:   323 TKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTILGVD 381
              KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  ILGV+
Sbjct:   363 NKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVE 422

Query:   382 XXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
                          H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct:   423 TGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 473

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0043518 "negative regulation of DNA damage response, signal transduction by p53 class mediator" evidence=IEA

GO:0043621 "protein self-association" evidence=IEA

GO:0048156 "tau protein binding" evidence=IEA

GO:0090312 "positive regulation of protein deacetylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8WQL7	MBK1_CAEEL	2, ., 7, ., 1, 2, ., 1	0.6570	0.7826	0.3877	yes	N/A
Q63470	DYR1A_RAT	2, ., 7, ., 1, 2, ., 2	0.7097	0.9313	0.5334	yes	N/A
Q13627	DYR1A_HUMAN	2, ., 7, ., 1, 2, ., 1	0.7097	0.9313	0.5334	yes	N/A
Q61214	DYR1A_MOUSE	2, ., 7, ., 1, 2, ., 1	0.7097	0.9313	0.5334	yes	N/A
Q76NV1	DYRK1_DICDI	2, ., 7, ., 1, 2, ., 1	0.6289	0.7848	0.4102	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.12	0.921
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	437
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-67
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-58
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-57
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-54
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-54
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-48
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-48
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-47
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-46
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-44
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-44
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-43
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	6e-43
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-42
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-41
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-40
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-40
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-40
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-39
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-38
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-37
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	7e-37
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-36
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-36
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-35
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-35
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	4e-35
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-35
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-34
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-34
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-34
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-33
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-33
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-33
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-33
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	8e-33
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-33
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-32
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-32
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-31
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-30
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-30
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-30
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-29
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-29
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-29
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-29
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-29
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-29
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	7e-28
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	7e-28
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-27
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-27
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-27
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-26
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-26
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	5e-26
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	7e-26
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	8e-26
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-25
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-25
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	7e-25
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-24
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-24
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-23
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	7e-23
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	8e-23
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-22
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-22
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-21
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-21
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-21
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-20
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-20
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	8e-20
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-20
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-20
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-19
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-19
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-19
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-19
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-19
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-19
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-19
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-19
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-18
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	4e-18
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-18
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-18
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-18
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	8e-18
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-17
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-17
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-17
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-17
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	6e-17
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-16
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-16
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-16
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-16
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	8e-16
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	8e-16
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-15
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-15
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-15
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-15
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-15
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	4e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-15
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-15
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	9e-15
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-14
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-14
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-14
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-14
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-14
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-14
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-14
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-14
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	5e-14
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-14
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-14
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	9e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-13
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-13
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-13
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-13
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-13
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-13
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	5e-13
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	5e-13
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	6e-13
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-13
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-12
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-12
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-12
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-12
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-12
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	7e-12
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	7e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	7e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-11
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-11
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-11
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-11
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-11
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	5e-11
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	6e-11
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-11
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-11
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-11
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-10
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-10
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-10
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-10
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-10
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	4e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	4e-10
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-10
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	7e-10
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-09
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-09
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-09
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-09
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-09
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-09
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	6e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	7e-09
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-09
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	9e-09
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-08
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	1e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-08
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-08
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-08
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-08
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-07
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-07
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-07
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	7e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-07
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-06
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-06
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	8e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-05
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	6e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	8e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	8e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	8e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	8e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.001
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.001
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.002
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  213 bits (545), Expect = 8e-67
 Identities = 81/220 (36%), Positives = 124/220 (56%), Gaps = 16/220 (7%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIH 169
           YEI   LG+GSFG+V  A D +    VAIK+IK KK      +   E+++L+K+      
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-----K 55

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+L   F  ++ L LV E     +L++L++      +S +  + + +Q+  AL +L
Sbjct: 56  HPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGR--LSEDEARFYLRQILSALEYL 113

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I+H DLKPENILL       +K+ DFG +  +  G+ L  ++ +  Y +PEVLL
Sbjct: 114 HS--KGIVHRDLKPENILLDEDGH--VKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLL 169

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           G  Y  A+D+WSLG IL EL TG+P F G +++ ++ K I
Sbjct: 170 GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKI 209

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  191 bits (489), Expect = 4e-58
 Identities = 106/326 (32%), Positives = 152/326 (46%), Gaps = 51/326 (15%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADI 168
           YE    LG+G++G V KA D +    VA+K I+         + A  E+ LL+++     
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK---- 56

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           H   IVKL      +  L LVFE    +L   +       +S NL K    QL   LA+ 
Sbjct: 57  HP-NIVKLLDVIHTERKLYLVFEYCDMDLKKYLDK-RPGPLSPNLIKSIMYQLLRGLAYC 114

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVL 285
            S    I+H DLKP+NIL+   +   +K+ DFG +   G  L  Y   + + +YR+PE+L
Sbjct: 115 HSH--RILHRDLKPQNILI--NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEIL 170

Query: 286 LGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS 344
           LG   Y  A+D+WS+GCI  E+ TG+PLF G +E+DQ+ KI ++LG P      G     
Sbjct: 171 LGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPG----- 225

Query: 345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK 404
               +L D      K      E++    RLD       G                     
Sbjct: 226 --VTKLPDYKPTFPKFPPKDLEKV--LPRLD-----PEG--------------------I 256

Query: 405 DLILRMLTYDPKKRISPTNVLRHEFF 430
           DL+ +ML Y+P KRIS    L+H +F
Sbjct: 257 DLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  189 bits (481), Expect = 6e-57
 Identities = 107/328 (32%), Positives = 153/328 (46%), Gaps = 54/328 (16%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ-----AQIEVQLLEKINKA 166
           Y+    +G+G++G V KA D      VAIK  K K  F ++     A  E++LL+++N  
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIK--KIKLRFESEGIPKTALREIKLLKELNHP 58

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                 I+KL   F  K  L LVFE +  +LY LI+     G+  +L K +  QL   LA
Sbjct: 59  -----NIIKLLDVFRHKGDLYLVFEFMDTDLYKLIK-DRQRGLPESLIKSYLYQLLQGLA 112

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPE 283
           F  S    I+H DLKPEN+L+ +     +K+ DFG +   G   +    Y+ +R+YR+PE
Sbjct: 113 FCHSH--GILHRDLKPENLLINTE--GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPE 168

Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           +LLG   Y   +D+WS+GCI  EL +  PLF GK+E+DQ+ KI   LG P         +
Sbjct: 169 LLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTP-------DPE 221

Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMK 402
               F  L+ N               P    +       N  P                 
Sbjct: 222 VWPKFTSLARNYKF----------SFPKKAGMPLPKLFPNASPQAL-------------- 257

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+ +ML YDP KRI+    L H +F
Sbjct: 258 --DLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  181 bits (462), Expect = 2e-54
 Identities = 88/230 (38%), Positives = 124/230 (53%), Gaps = 19/230 (8%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADI 168
           YE+   LG GSFG V KA        VA+KI+K    K      A+ E+++L +++    
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS---- 56

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           H   IV+L   F  K+HL LV E     +L++ +       +S +  KK A Q+   L +
Sbjct: 57  HP-NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEY 113

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC---HVGQTLYQYIQSRYYRSPEV 284
           L S    IIH DLKPENILL   +   +KI DFG +        +L  ++ + +Y +PEV
Sbjct: 114 LHS--NGIIHRDLKPENILLD--ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEV 169

Query: 285 LL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           LL G  Y   +D+WSLG IL EL TG+P FSG+N +DQ+  I  +LG P 
Sbjct: 170 LLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPL 219

Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  181 bits (462), Expect = 4e-54
 Identities = 107/330 (32%), Positives = 154/330 (46%), Gaps = 58/330 (17%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--------LNQAQIEVQLLEKI 163
           Y++   LG G+FG V  A + E    VAIK  K KK F        L     EV+ L K+
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIK--KMKKKFYSWEECMNLR----EVKSLRKL 54

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           N+   H   IVKLK  F   + L  VFE +  NLY L+++      S ++ +    Q+  
Sbjct: 55  NE---H-PNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQ 110

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
            LA +        H DLKPEN+L+  P+   +KI DFG +  +        Y+ +R+YR+
Sbjct: 111 GLAHIHK--HGFFHRDLKPENLLVSGPEV--VKIADFGLAREIRSRPPYTDYVSTRWYRA 166

Query: 282 PEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           PE+LL    Y   +D+W+LGCI+ EL+T  PLF G +E+DQ+ KI  VLG P        
Sbjct: 167 PEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTP-------- 218

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
             T + +       Y L      R  +   +  L  ++              P  S    
Sbjct: 219 --TKQDWPE----GYKLASKLGFRFPQFAPT-SLHQLI--------------PNASPE-- 255

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               DLI  ML +DPKKR + +  L+H +F
Sbjct: 256 --AIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  166 bits (423), Expect = 2e-48
 Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 61/333 (18%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKAD 167
           RY+I   +G+G+ G V KA D E    VA+K +  ++      NQA  E++ L+      
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ--- 57

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
               Y+VKL   F   +   LV E +  +L  ++R+     +     K + + L   +A+
Sbjct: 58  --HPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAY 114

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQY---IQSRYYRSPE 283
           +      I+H DLKP N+L+ +     +KI DFG +     +    Y   + +R+YR+PE
Sbjct: 115 MH--ANGIMHRDLKPANLLISA--DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PGYLL 337
           +L G   YD  +D+W++GCI  EL  G PLF G+N+++Q+  +   LG P     PG   
Sbjct: 171 LLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGL-- 228

Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSL 397
                       L D + +      T  E  P    L+ I       P     +    +L
Sbjct: 229 ----------TSLPDYNKI------TFPESKP--IPLEEIF------P-----DASPEAL 259

Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  DL+  +L YDP KR+S    LRH +F
Sbjct: 260 -------DLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  167 bits (426), Expect = 3e-48
 Identities = 103/346 (29%), Positives = 152/346 (43%), Gaps = 80/346 (23%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEKI 163
           RYE+   +G G++G V  A D     +VAIK I N   F     I       E++LL  +
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN--VF--DDLIDAKRILREIKLLRHL 56

Query: 164 NKADIHSRYIVKLKGHFTWK-----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
                H   I+ L            N + +V EL+  +L+ +I++         LT    
Sbjct: 57  R----H-ENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLTDDHI 105

Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVG---- 267
           Q    Q+   L +L S   ++IH DLKP NIL+   C      +KI DFG +  V     
Sbjct: 106 QYFLYQILRGLKYLHSA--NVIHRDLKPSNILVNSNCD-----LKICDFGLARGVDPDED 158

Query: 268 --QTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
               L +Y+ +R+YR+PE+LL    Y  AID+WS+GCI  EL T +PLF G++ +DQ+  
Sbjct: 159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL 218

Query: 325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGG 384
           I+EVLG P         +  K+       +Y+        K + P SK            
Sbjct: 219 IVEVLGTPS-------EEDLKFITSEKARNYLKSLPK---KPKKPLSKLFPGA------- 261

Query: 385 PGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                            +  DL+ +ML +DPKKRI+    L H + 
Sbjct: 262 ---------------SPEAIDLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  162 bits (412), Expect = 1e-47
 Identities = 76/196 (38%), Positives = 102/196 (52%), Gaps = 16/196 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G FG V  A D +   +VAIKIIK  +    L +   E+++L+K+N        IVK
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-----HPNIVK 55

Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           L G F  +NHL LV E     +L +L++  N   +S +   +   Q+   L +L S    
Sbjct: 56  LYGVFEDENHLYLVMEYCEGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYLHS--NG 112

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSC---HVGQTLYQYIQSRYYRSPEVLLGIP-Y 290
           IIH DLKPENILL S     +K+ DFG S         L   + +  Y +PEVLLG   Y
Sbjct: 113 IIHRDLKPENILLDSDNGK-VKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYY 171

Query: 291 DLAIDMWSLGCILVEL 306
               D+WSLG IL EL
Sbjct: 172 SEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  161 bits (409), Expect = 2e-46
 Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 57/329 (17%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKAD 167
           Y+I   +G+G+F +V+KA   +     AIK +K    F +  Q+    E+Q L +++   
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKH--FKSLEQVNNLREIQALRRLS--- 55

Query: 168 IHSRYIVKLKGHFTWKNH--LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                I++L      +    L LVFEL+  NLY LI+      +     K +  QL  +L
Sbjct: 56  -PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRP-LPEKRVKSYMYQLLKSL 113

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC--HVGQTLYQYIQSRYYRSPE 283
             +      I H D+KPENIL+   K   +K+ DFGS    +      +YI +R+YR+PE
Sbjct: 114 DHMHRN--GIFHRDIKPENILI---KDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPE 168

Query: 284 VLL--GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
            LL  G  Y   +D+W++GC+  E+ +  PLF G NE+DQ+ KI +VLG P   +L    
Sbjct: 169 CLLTDGY-YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVL---- 223

Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM 401
              K F +    +Y       T   +L           + N    G              
Sbjct: 224 ---KKFRKSRHMNYNFPSKKGTGLRKL-----------LPNASAEGL------------- 256

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              DL+ ++L YDP +RI+    LRH +F
Sbjct: 257 ---DLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  155 bits (394), Expect = 4e-44
 Identities = 101/343 (29%), Positives = 156/343 (45%), Gaps = 80/343 (23%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKP-FLNQAQIEVQLLEKINKADI 168
           YE    +G+G++GQV KA + +    VA+K I+  N+K  F   A  E++LL+K+     
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR---- 56

Query: 169 HSRYIVKLKGHFT--WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           H   IV+LK   T   K  + +VFE + ++L  L+ +      + +  K + +QL   L 
Sbjct: 57  H-PNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKCYMKQLLEGLQ 114

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--------- 277
           +L S    I+H D+K  NIL+ +     +K+ DFG        L +    R         
Sbjct: 115 YLHSN--GILHRDIKGSNILINN--DGVLKLADFG--------LARPYTKRNSADYTNRV 162

Query: 278 ---YYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
              +YR PE+LLG   Y   +DMWS+GCIL EL  G+P+F G  E++Q+ KI E+ G P 
Sbjct: 163 ITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP- 221

Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP 393
                    T + +  +S   +          +R                          
Sbjct: 222 ---------TDENWPGVSKLPWFENLKPKKPYKR-------------------------- 246

Query: 394 GHSLADYMKFK------DLILRMLTYDPKKRISPTNVLRHEFF 430
              L ++ K        DL+ ++LT DPKKRIS    L+HE+F
Sbjct: 247 --RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  155 bits (393), Expect = 5e-44
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 53/331 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKA 166
           ++YE+  ++G+G++G V+K  +      VAIK  K   + +     A  EV++L ++   
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL--- 57

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLI-RNTNFHGVSLNLTKKFAQQLCCAL 225
                 IV LK  F  K  L LVFE +   L  L+  +    G+  +  + +  QL  A+
Sbjct: 58  --RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG--GLPPDAVRSYIWQLLQAI 113

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQSRYYRS 281
           A+  S   +IIH D+KPENIL+   +   +K+ DFG            L  Y+ +R+YR+
Sbjct: 114 AYCHS--HNIIHRDIKPENILV--SESGVLKLCDFGFARALRARPASPLTDYVATRWYRA 169

Query: 282 PEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG-MPPGYLLHG 339
           PE+L+G   Y   +D+W++GCI+ EL  GEPLF G +++DQ+  I + LG +PP    H 
Sbjct: 170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS---HQ 226

Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD 399
                      S N               P   + +++          R   +      D
Sbjct: 227 E--------LFSSNPRF-------AGVAFPEPSQPESLE--------RRYPGKVSSPALD 263

Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           ++K        L  DPK+R++   +L+H +F
Sbjct: 264 FLK------ACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  152 bits (386), Expect = 5e-43
 Identities = 98/338 (28%), Positives = 149/338 (44%), Gaps = 70/338 (20%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKADI 168
           YE    +G+G++G V KA D      VA+K ++    +  +  + + E+ LL+++   + 
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFE- 59

Query: 169 HSRYIVKL----KGHFTWKN-HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           H   IV+L     G  T +   L LVFE +  +L   +      G+     K   +QL  
Sbjct: 60  HP-NIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLR 118

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQTLYQ 272
            + FL S    I+H DLKP+NIL+ S  +  +KI DFG           +S  V  TL+ 
Sbjct: 119 GVDFLHSH--RIVHRDLKPQNILVTSDGQ--VKIADFGLARIYSFEMALTSVVV--TLW- 171

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
                 YR+PEVLL   Y   +DMWS+GCI  EL    PLF G +E DQ+ KI +V+G+P
Sbjct: 172 ------YRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLP 225

Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE 392
                          +    N  + + S  +             +  +   G        
Sbjct: 226 SE-------------EEWPRNVSLPRSSFPSY----TPRSFKSFVPEICEEG-------- 260

Query: 393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                       DL+ +MLT++P KRIS    L+H +F
Sbjct: 261 -----------LDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  153 bits (389), Expect = 6e-43
 Identities = 106/339 (31%), Positives = 160/339 (47%), Gaps = 63/339 (18%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ--AQI---EVQLLEKI 163
           L +YEI   LGKG++G V KA D   K  VA+K I +   F N   AQ    E+  L+++
Sbjct: 6   LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDA--FRNATDAQRTFREIMFLQEL 63

Query: 164 NKADIHSRYIVKLKGHFTWKNH--LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQ 220
                    IVKL      +N   + LVFE +  +L+ +IR      +  ++ K++   Q
Sbjct: 64  GDHP----NIVKLLNVIKAENDKDIYLVFEYMETDLHAVIR----ANILEDVHKRYIMYQ 115

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--------SSCHVGQTLYQ 272
           L  AL ++ S  +  IH DLKP NILL S  R  +K+ DFG                L  
Sbjct: 116 LLKALKYIHSGNV--IHRDLKPSNILLNSDCR--VKLADFGLARSLSELEENPENPVLTD 171

Query: 273 YIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
           Y+ +R+YR+PE+LLG   Y   +DMWS+GCIL E+  G+PLF G + ++Q+ KIIEV+G 
Sbjct: 172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231

Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
           P    +   S  S +   + D+     +      E LP +   D +              
Sbjct: 232 PSAEDI--ESIKSPFAATMLDSLPSRPR--KPLDELLPKASD-DAL-------------- 272

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                        DL+ ++L ++P KR++    L H + 
Sbjct: 273 -------------DLLKKLLVFNPNKRLTAEEALEHPYV 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  151 bits (385), Expect = 1e-42
 Identities = 99/339 (29%), Positives = 148/339 (43%), Gaps = 73/339 (21%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQI-EVQLLEKIN 164
           RYE    LG+G++  V KA D E    VAIK IK  +       +N   + E++LL+++ 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT----KKFAQQ 220
             +I     + L   F  K+++ LVFE +  +L  +I++      S+ LT    K +   
Sbjct: 61  HPNI-----IGLLDVFGHKSNINLVFEFMETDLEKVIKDK-----SIVLTPADIKSYMLM 110

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSR 277
               L +L S    I+H DLKP N+L+ S     +K+ DFG +   G    +    + +R
Sbjct: 111 TLRGLEYLHS--NWILHRDLKPNNLLIAS--DGVLKLADFGLARSFGSPNRKMTHQVVTR 166

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP---- 332
           +YR+PE+L G   Y + +DMWS+GCI  EL    P   G +++DQ+ KI E LG P    
Sbjct: 167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226

Query: 333 -PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
            PG                S   YV  K         P    L  I              
Sbjct: 227 WPGV--------------TSLPDYVEFKPF-------PP-TPLKQIFPAA---------- 254

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  D ++      R+LT +P KRI+    L H +F
Sbjct: 255 --SDDALDLLQ------RLLTLNPNKRITARQALEHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  147 bits (374), Expect = 8e-41
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 65/347 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKA 166
            RY+    +G G++G V  A D     +VAIK I +       A+    E+++L      
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHD 64

Query: 167 DIHS-RYIVKLKG-HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +I + R I++  G  F     + +V +L+  +L+++I +     ++    + F  QL   
Sbjct: 65  NIIAIRDILRPPGADF---KDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRG 119

Query: 225 LAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG-------SSCHVGQTLYQYI 274
           L ++ S   ++IH DLKP N+L+   C      ++I DFG       S       + +Y+
Sbjct: 120 LKYIHSA--NVIHRDLKPSNLLVNEDCE-----LRIGDFGMARGLSSSPTEHKYFMTEYV 172

Query: 275 QSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE+LL +P Y  AIDMWS+GCI  E+     LF GKN V Q+  I+ VLG P 
Sbjct: 173 ATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS 232

Query: 334 GYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
             +L+  G+ +  KY   L             RK+ +P       I       P      
Sbjct: 233 EEVLNRIGSDRVRKYIQNLP------------RKQPVP----WSKIF------PKASP-- 268

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK-HSVDN 437
               +L       DL+ +ML +DP++RI+    L+H F  + H  D+
Sbjct: 269 ---EAL-------DLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  146 bits (371), Expect = 1e-40
 Identities = 101/330 (30%), Positives = 153/330 (46%), Gaps = 50/330 (15%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKA 166
           D YE    + +G++G V +A D +    VA+K +K +K    F   +  E+ +L K+   
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHP 64

Query: 167 DI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +I   + +V         + + +V E + ++L +L+  T       +  K    QL   +
Sbjct: 65  NIVTVKEVVVGSNL----DKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGV 119

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ---SRYYRSP 282
           A L   +  I+H DLK  N+LL    R  +KI DFG +   G  L  Y Q   + +YR+P
Sbjct: 120 AHLH--DNWILHRDLKTSNLLL--NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAP 175

Query: 283 EVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           E+LLG   Y  AIDMWS+GCI  EL T +PLF GK+E+DQ+ KI ++LG P         
Sbjct: 176 ELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTP--------- 226

Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD-NGGPGGRRRNEPGHSLADY 400
                    ++  +             PG   L           P  + R +        
Sbjct: 227 ---------TEKIW-------------PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSD 264

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             F DL+ R+LTYDP KRIS  + L+H +F
Sbjct: 265 NGF-DLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  146 bits (370), Expect = 4e-40
 Identities = 101/337 (29%), Positives = 156/337 (46%), Gaps = 54/337 (16%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ-----AQIEVQLLEKI 163
           L RY+    +G G+ G V  A+D      VAIK  K  +PF N      A  E+ L++ +
Sbjct: 15  LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIK--KLSRPFQNVTHAKRAYRELVLMKLV 72

Query: 164 NKADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF 217
           N  +I     + L   FT +        + LV EL+  NL  +I+    H          
Sbjct: 73  NHKNI-----IGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDH----ERMSYL 123

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQ 275
             Q+ C +  L S    IIH DLKP NI++ S     +KI+DFG   +      +  Y+ 
Sbjct: 124 LYQMLCGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVV 179

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           +RYYR+PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  KIIE LG P   
Sbjct: 180 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS-- 237

Query: 336 LLHGASKTSKYFDRL--SDNSYVLKKSTDTRKERLPGSKRL-DTILGVDNGGPGGRRRNE 392
                    ++  RL  +  +YV  +    +       +   D +   D+      + ++
Sbjct: 238 --------DEFMSRLQPTVRNYVENR---PKYAGYSFEELFPDVLFPPDSESHNKLKASQ 286

Query: 393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
                      +DL+ +ML  DP+KRIS  + L+H +
Sbjct: 287 A----------RDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  145 bits (368), Expect = 6e-40
 Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 64/340 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           DRY+  + +G G++GQV  AFD +   +VAIK  K  +PF  Q+ I       E++LL+ 
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIK--KLSRPF--QSAIHAKRTYRELRLLKH 70

Query: 163 INKADIHSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKK 216
           ++    H   ++ L   FT  + L       LV  L+  +L N+++       S +  + 
Sbjct: 71  MD----H-ENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKL---SDDHIQF 122

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
              Q+   L ++ S    IIH DLKP NI +   +   +KI+DFG + H    +  Y+ +
Sbjct: 123 LVYQILRGLKYIHSA--GIIHRDLKPSNIAV--NEDCELKILDFGLARHTDDEMTGYVAT 178

Query: 277 RYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG+ LF G + +DQ+ +I+ ++G P   
Sbjct: 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238

Query: 336 LLHG-ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
           LL   +S++++        +Y+         + LP   + D             +    G
Sbjct: 239 LLQKISSESAR--------NYI---------QSLPQMPKKDF------------KEVFSG 269

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
            +        DL+ +ML  DP KRI+    L H +  ++ 
Sbjct: 270 AN----PLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  143 bits (362), Expect = 1e-39
 Identities = 103/320 (32%), Positives = 152/320 (47%), Gaps = 50/320 (15%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 62

Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 63  KLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-- 120

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIP-Y 290
           ++H DLKP+N+L+      AIK+ DFG +   G  +  Y   + + +YR+PE+LLG   Y
Sbjct: 121 VLHRDLKPQNLLI--NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 178

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 179 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY---- 234

Query: 351 SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM 410
                   K +  +  R   SK +  +   D  G                   +DL+ +M
Sbjct: 235 --------KPSFPKWARQDFSKVVPPL---DEDG-------------------RDLLSQM 264

Query: 411 LTYDPKKRISPTNVLRHEFF 430
           L YDP KRIS    L H FF
Sbjct: 265 LHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  138 bits (350), Expect = 7e-38
 Identities = 99/325 (30%), Positives = 148/325 (45%), Gaps = 60/325 (18%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ--------AQIEVQLLEKINKADIH 169
           +G+G++G V KA D      VA+K I+     L          A  E+ LL+++N    H
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIR-----LETEDEGVPSTAIREISLLKELN----H 57

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              IV+L      +N L LVFE L  +L   + ++   G+   L K +  QL   +A+  
Sbjct: 58  PN-IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLL 286
           S    ++H DLKP+N+L+   +  A+K+ DFG +   G  +  Y   + + +YR+PE+LL
Sbjct: 117 SHR--VLHRDLKPQNLLI--DREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 172

Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
           G   Y   +D+WS+GCI  E+    PLF G +E+DQ+ +I   LG P   +  G +    
Sbjct: 173 GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232

Query: 346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD 405
           Y                  K   P   R D    V N    G                 D
Sbjct: 233 Y------------------KPTFPKWARQDLSKVVPNLDEDGL----------------D 258

Query: 406 LILRMLTYDPKKRISPTNVLRHEFF 430
           L+ +ML YDP KRIS    L+H +F
Sbjct: 259 LLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  137 bits (347), Expect = 5e-37
 Identities = 106/355 (29%), Positives = 159/355 (44%), Gaps = 97/355 (27%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ--VAIKIIKN---KKPFLNQAQIEVQLLEKINK 165
           RYE+   LG+G++G V  A + E   +  VAIK I N   KK    +A  E++LL     
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLL----- 55

Query: 166 ADIHSRYIVKLKGHFTWKNHLCL-----VF-----------ELLSYNLYNLIRN----TN 205
              H       +GH   KN  CL     VF           EL+  +L+ +IR+    T+
Sbjct: 56  --RH------FRGH---KNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTD 104

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC- 264
            H       + F  Q+ C L ++ S   +++H DLKP N+L+ +     +KI DFG +  
Sbjct: 105 AH------FQSFIYQILCGLKYIHSA--NVLHRDLKPGNLLVNA--DCELKICDFGLARG 154

Query: 265 -HVGQT-----LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKN 317
                      + +Y+ +R+YR+PE++L    Y  AID+WS+GCIL EL   +P+F GK+
Sbjct: 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD 214

Query: 318 EVDQMTKIIEVLGMPPGYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD 375
            VDQ+ +I++VLG P    L   G+ K   Y                         + L 
Sbjct: 215 YVDQLNQILQVLGTPDEETLSRIGSPKAQNYI------------------------RSLP 250

Query: 376 TILGVDNGGPGGRRRNEPGHS-LADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
            I               P  + LA      DL+ ++L +DP KRIS    L H +
Sbjct: 251 NIPKKPFE------SIFPNANPLA-----LDLLEKLLAFDPTKRISVEEALEHPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  136 bits (343), Expect = 7e-37
 Identities = 101/334 (30%), Positives = 149/334 (44%), Gaps = 60/334 (17%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKAD 167
           +YE    +G G++G V KA D      VA+K ++   N+         EV LL+++   D
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD 60

Query: 168 IHSRYIVKL-----KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            H   IV+L           +  + LVFE +  +L   +      G+     K   +Q  
Sbjct: 61  -HPN-IVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFL 118

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQSRY 278
             L FL +    I+H DLKPENIL+ S     +K+ DFG     SC +   L   + + +
Sbjct: 119 RGLDFLHAN--CIVHRDLKPENILVTS--GGQVKLADFGLARIYSCQMA--LTPVVVTLW 172

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           YR+PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+PP     
Sbjct: 173 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP----- 227

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
                                     ++  P     D  L      P G R   P  S+ 
Sbjct: 228 --------------------------EDDWP----RDVTLPRGAFSPRGPR---PVQSVV 254

Query: 399 DYMKFK--DLILRMLTYDPKKRISPTNVLRHEFF 430
             ++     L+L MLT++P KRIS    L+H FF
Sbjct: 255 PEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  134 bits (339), Expect = 1e-36
 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 34/234 (14%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-------KNKKPFLNQAQIEVQLLEKI 163
           +YEI   +GKGSFG+V       +     +K I       K ++     A  EV++L+K+
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKERE----DALNEVKILKKL 56

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL---NLTKKFAQ 219
           N    H   I+K    F  K  LC+V E     +L   I+     G       +   F Q
Sbjct: 57  N----HP-NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ 111

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQY 273
            LC AL +L S +  I+H D+KP+NI L S     +K+ DFG      S+  + +T+   
Sbjct: 112 -LCLALKYLHSRK--ILHRDIKPQNIFLTSNGL--VKLGDFGISKVLSSTVDLAKTV--- 163

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           + + YY SPE+    PY+   D+WSLGC+L EL T +  F G+N ++   KI++
Sbjct: 164 VGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  134 bits (339), Expect = 2e-36
 Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 23/229 (10%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIK---IIKNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LLG+GSFG V  A D +    +A+K   +  + +  L   + E+++L  +         I
Sbjct: 7   LLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ-----HPNI 61

Query: 174 VKLKGHFT--WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           V+  G      KN L +  E +S  +L +L++   F  +   + +K+ +Q+   LA+L S
Sbjct: 62  VRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHS 119

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVL 285
               I+H D+K  NIL+ S     +K+ DFG +  +G             + Y+ +PEV+
Sbjct: 120 --NGIVHRDIKGANILVDSDGV--VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI 175

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPP 333
            G  Y  A D+WSLGC ++E+ TG+P +S   N +  + KI      P 
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPE 224

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  131 bits (333), Expect = 2e-35
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 43/254 (16%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI------IKNKKPFLNQAQIEVQLLEKINK 165
           ++   ++G+GSF  VV A + E   + AIKI      IK KK  +   +IE ++L ++N 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK--VKYVKIEKEVLTRLN- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                  I+KL   F  + +L  V E      L   IR   +  +    T+ +A ++  A
Sbjct: 60  ---GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLA 114

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----------------- 267
           L +L S    IIH DLKPENILL       IKI DFG++  +                  
Sbjct: 115 LEYLHS--KGIIHRDLKPENILLDKDMH--IKITDFGTAKVLDPNSSPESNKGDATNIDS 170

Query: 268 QTLYQYIQSRY------YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
           Q      +         Y SPE+L   P   + D+W+LGCI+ ++ TG+P F G NE   
Sbjct: 171 QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT 230

Query: 322 MTKIIEV-LGMPPG 334
             KI+++    PP 
Sbjct: 231 FQKILKLEYSFPPN 244

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  130 bits (329), Expect = 4e-35
 Identities = 73/214 (34%), Positives = 113/214 (52%), Gaps = 11/214 (5%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LGKGSFG+V+     +     A+K++K KK  + + ++E  L E+   + I+  +IVKL 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLK-KKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59

Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             F  +  L LV E      L++ +        S    + +A ++  AL +L S  L II
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHS--LGII 115

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + DLKPENILL +     IK+ DFG +  +   G     +  +  Y +PEVLLG  Y  A
Sbjct: 116 YRDLKPENILLDA--DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKA 173

Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +D WSLG +L E+ TG+P F  ++  +   KI++
Sbjct: 174 VDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK 207

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  135 bits (340), Expect = 4e-35
 Identities = 126/457 (27%), Positives = 208/457 (45%), Gaps = 59/457 (12%)

Query: 1   MNNVINAGSPLYGRLVADNSIQNQDILSMQARIPMQFRDPATAPLRKLSVDLIKTYKHIN 60
             N ++  SP      + ++ Q     +  AR     RD  TA     S D  +T  H  
Sbjct: 23  PVNALSGNSPK--ANNSASTGQTTSRSTNSARRSGSKRDRETA----TSTDSGRTKSHEG 76

Query: 61  EVYYTKKKRKAQLSHNETRSNKKEK-KYVHNDGHDDENYDYIIKHGEKF---LDRYEIDT 116
                +       +       KK+K  Y   +   +E + Y++  GE       R++I +
Sbjct: 77  AATTKQATTTPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVL-GEDIDVSTQRFKILS 135

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVK 175
           LLG+G+FG+VV+A+D + K   A+KI++N   +   A+IE+Q +EK+ +AD   R+ ++K
Sbjct: 136 LLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMK 195

Query: 176 LKGHFTWKN-HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ---QLCCALAFLSSP 231
           ++ +F  +  H+C+V       L + I     HG   +  +  AQ   Q   AL +  + 
Sbjct: 196 IQRYFQNETGHMCIVMPKYGPCLLDWIMK---HG-PFS-HRHLAQIIFQTGVALDYFHT- 249

Query: 232 ELSIIHCDLKPENILLCS--------------PKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           EL ++H DLKPENIL+ +              P    ++I D G  C    +    + +R
Sbjct: 250 ELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTR 309

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           +YRSPEV+LG+ +  + DMWS+GCI+ EL+TG+ L+   + ++ +  + + LG  P    
Sbjct: 310 HYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPS--- 366

Query: 338 HGASKTSKYFDRLSDNSY-VLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
             A +      RL  NS   L+  TD         K L  I            R  P   
Sbjct: 367 EWAGRCGTEEARLLYNSAGQLRPCTD--------PKHLARI-----------ARARPVRE 407

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           +       DLI  +L YD +KR++   +  H + LK+
Sbjct: 408 VIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444

Length = 467

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  134 bits (339), Expect = 4e-35
 Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 51/365 (13%)

Query: 76  NETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDR-YEIDTLLGKGSFGQVVKAFDHEE 134
           N+ + +++E+ + +N G D++    I     +  ++ Y++  ++G GSFG V +A   + 
Sbjct: 31  NDKKLDEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDT 90

Query: 135 KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS 194
             +VAIK +     + N+  + ++ L  IN   +   Y  +          L +V E + 
Sbjct: 91  SEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP 150

Query: 195 YNLYNLIR--NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
             ++  ++    N H + L L K ++ QLC ALA++ S    I H DLKP+N LL  P  
Sbjct: 151 QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK--FICHRDLKPQN-LLIDPNT 207

Query: 253 SAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTG 309
             +K+ DFGS+ ++  GQ    YI SR+YR+PE++LG   Y   ID+WSLGCI+ E+  G
Sbjct: 208 HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267

Query: 310 EPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLK----KSTDTRK 365
            P+FSG++ VDQ+ +II+VLG P          T      ++ N   +K    K  D +K
Sbjct: 268 YPIFSGQSSVDQLVRIIQVLGTP----------TEDQLKEMNPNYADIKFPDVKPKDLKK 317

Query: 366 ERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL 425
              P     D I                           + I + L Y+P KR++P   L
Sbjct: 318 V-FPKGTPDDAI---------------------------NFISQFLKYEPLKRLNPIEAL 349

Query: 426 RHEFF 430
              FF
Sbjct: 350 ADPFF 354

Length = 440

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  130 bits (328), Expect = 1e-34
 Identities = 95/330 (28%), Positives = 163/330 (49%), Gaps = 53/330 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINKA 166
           ++YE   L+G+GS+G V+K    E    VAIK     ++ K     A  E+++L+++   
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL--- 57

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                 +V L   F  K  L LVFE + + + + +     +G+  +  +K+  Q+   + 
Sbjct: 58  --RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIE 114

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPE 283
           F  S   +IIH D+KPENIL+   +   +K+ DFG +  +   G+    Y+ +R+YR+PE
Sbjct: 115 FCHSH--NIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPE 170

Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           +L+G   Y  A+D+W++GC++ E+ TGEPLF G +++DQ+  II+ LG            
Sbjct: 171 LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLG------------ 218

Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS--LADY 400
                + +  +  + +K+      RLP  K ++ +            +  P  S  + D 
Sbjct: 219 -----NLIPRHQEIFQKNPLFAGMRLPEVKEIEPL-----------EKRFPKLSGLVLDL 262

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            K     LR+   DP  R S + +L HEFF
Sbjct: 263 AK---QCLRI---DPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  129 bits (325), Expect = 2e-34
 Identities = 82/229 (35%), Positives = 131/229 (57%), Gaps = 12/229 (5%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           +++E+  ++G+G++G V+K    E K  VAIK  K+ +   N+   E  L E      + 
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLK 58

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              IV+LK  F  +  L LVFE +  N+  L+     +GV     + +  QL  A+ +  
Sbjct: 59  QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCH 117

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ----TLYQYIQSRYYRSPEVL 285
             +  I+H D+KPEN+L+       +K+ DFG + ++ +       +Y+ +R+YRSPE+L
Sbjct: 118 KND--IVHRDIKPENLLISH--NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELL 173

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG-MPP 333
           LG PY  A+DMWS+GCIL EL  G+PLF G++E+DQ+  I +VLG +P 
Sbjct: 174 LGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPA 222

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  128 bits (323), Expect = 5e-34
 Identities = 99/336 (29%), Positives = 147/336 (43%), Gaps = 57/336 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKA 166
           D YE    +G+G++G+V KA D      VA+K  +   +++     A  E+ LL+ ++  
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-- 58

Query: 167 DIHSRYIVKLKG--HFTWKN---HLCLVFELLSYNLYNLI---RNTNFHGVSLNLTKKFA 218
              S YIV+L    H   KN    L LVFE L  +L   +          +     K F 
Sbjct: 59  --ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFM 116

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQ 275
            QL   +A        ++H DLKP+N+L+   ++  +KI D G        +  Y   I 
Sbjct: 117 YQLLKGVAHCHK--HGVMHRDLKPQNLLV-DKQKGLLKIADLGLGRAFSIPVKSYTHEIV 173

Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR+PEVLLG   Y   +D+WS+GCI  E+   +PLF G +E+ Q+  I ++LG P  
Sbjct: 174 TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233

Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
            +  G SK   + +                    P  K  D    V +  P G       
Sbjct: 234 QVWPGVSKLRDWHE-------------------FPQWKPQDLSRAVPDLSPEG------- 267

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                     DL+ +ML YDP KRIS    L H +F
Sbjct: 268 ---------LDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  128 bits (323), Expect = 1e-33
 Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 73/337 (21%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEK-- 162
           +RY     +G G+FG V  A D      VAIK  K  KPF           E++LL+   
Sbjct: 10  NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIK--KIMKPFSTPVLAKRTYRELKLLKHLR 67

Query: 163 ----INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
               I+ +DI   +I  L+  +        V ELL  +L+ L+        S  L K+F 
Sbjct: 68  HENIISLSDI---FISPLEDIY-------FVTELLGTDLHRLLT-------SRPLEKQFI 110

Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S    ++H DLKP NIL+   +   +KI DFG +      +  Y+
Sbjct: 111 QYFLYQILRGLKYVHSA--GVVHRDLKPSNILI--NENCDLKICDFGLARIQDPQMTGYV 166

Query: 275 QSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +RYYR+PE++L    YD+ +D+WS GCI  E+  G+PLF GK+ V+Q + I ++LG PP
Sbjct: 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226

Query: 334 GYLLHGASKTSKYFDRL-SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE 392
                         + + S+N+    +S   ++E +P S++        N  P       
Sbjct: 227 ----------DDVINTICSENTLRFVQSLP-KREPVPFSEK------FKNADPSAI---- 265

Query: 393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
                       DL+ +ML +DP+KRIS    L H +
Sbjct: 266 ------------DLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  128 bits (324), Expect = 1e-33
 Identities = 94/335 (28%), Positives = 150/335 (44%), Gaps = 60/335 (17%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKAD 167
            RY+  + +G+G++G V  A       +VAIK I     + F  +   E+++L +    +
Sbjct: 5   PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHEN 64

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           I     +     F   N + +V EL+  +LY LI+  +   +S +  + F  Q+   L +
Sbjct: 65  IIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQH---LSNDHIQYFLYQILRGLKY 121

Query: 228 LSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG-------SSCHVGQTLYQYIQSR 277
           + S   +++H DLKP N+LL   C      +KI DFG          H G  L +Y+ +R
Sbjct: 122 IHSA--NVLHRDLKPSNLLLNTNCD-----LKICDFGLARIADPEHDHTGF-LTEYVATR 173

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           +YR+PE++L    Y  AID+WS+GCIL E+ +  PLF GK+ + Q+  I+ VLG P    
Sbjct: 174 WYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTP---- 229

Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
                         S        S   R   + LP   ++       N  P         
Sbjct: 230 --------------SQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKAL------ 269

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
                     DL+ +MLT++P KRI+    L H +
Sbjct: 270 ----------DLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  127 bits (321), Expect = 2e-33
 Identities = 97/360 (26%), Positives = 152/360 (42%), Gaps = 84/360 (23%)

Query: 111 RYEIDTLLGKGSFGQVVKAF--DHEEKCQVAIKIIKNKKPF---LNQAQI-EVQLLEKIN 164
           +YEI+  +G+G++G+V KA   + ++  + AIK  K  K     ++Q+   E+ LL    
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLR--- 57

Query: 165 KADIHSRYIVKLKGHFTWKNHLC--LVFELLSYNLYNLI---RNTNFHGVSLNLTKKFAQ 219
             ++    +V L   F         L+F+   ++L+ +I   R      +  ++ K    
Sbjct: 58  --ELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW 115

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           Q+   + +L S    ++H DLKP NIL+    P+R  +KI D G +      L       
Sbjct: 116 QILNGVHYLHSN--WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLD 173

Query: 278 ------YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQ 321
                 +YR+PE+LLG   Y  AID+W++GCI  EL T EP+F G+            DQ
Sbjct: 174 PVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233

Query: 322 MTKIIEVLGMP-----------PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPG 370
           + +I EVLG P           P Y         K F   +  S  L K  +  K+  P 
Sbjct: 234 LERIFEVLGTPTEKDWPDIKKMPEY-----DTLMKDFKTKTYPSNSLAKWMEKHKK--PD 286

Query: 371 SKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           S+                                DL+ ++L YDP KRI+    L H +F
Sbjct: 287 SQGF------------------------------DLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  126 bits (317), Expect = 4e-33
 Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 59/334 (17%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ--------AQIEVQLL 160
           +D+YE    +G+G++G V KA D      +A+K I+     L Q        A  E+ LL
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR-----LEQEDEGVPSTAIREISLL 55

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
           +     ++    IV+L+     +  L LVFE L  +L   + ++     +  L K +  Q
Sbjct: 56  K-----EMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQ 110

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSR 277
           +   +A+  S    ++H DLKP+N LL   + +A+K+ DFG +   G   +T    + + 
Sbjct: 111 ILRGIAYCHSHR--VLHRDLKPQN-LLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTL 167

Query: 278 YYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           +YR+PE+LLG   Y   +D+WS+GCI  E+   +PLF G +E+D++ KI  +LG P    
Sbjct: 168 WYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEET 227

Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
             G +    Y                  K   P     D    V    P G         
Sbjct: 228 WPGVTSLPDY------------------KSAFPKWPPKDLATVVPTLEPAG--------- 260

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                   DL+ +ML  DP KRI+    L HE+F
Sbjct: 261 -------VDLLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  126 bits (318), Expect = 8e-33
 Identities = 94/349 (26%), Positives = 149/349 (42%), Gaps = 70/349 (20%)

Query: 111 RYE-IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEVQLL 160
           RY      LG+G++G+V KA+D      VAIK +K  +           +    I    L
Sbjct: 9   RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTL 68

Query: 161 EKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            ++    +I    I+ L   +   + + LV ++++ +L  ++       ++ +  K    
Sbjct: 69  RELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR--LTESQVKCILL 126

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-------Q 272
           Q+   L  L       +H DL P NI +    +   KI DFG +   G   Y       +
Sbjct: 127 QILNGLNVLHK--WYFMHRDLSPANIFI--NSKGICKIADFGLARRYGYPPYSDTLSKDE 182

Query: 273 YIQSR----------YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
            +Q R          +YR+PE+L+G   Y  A+DMWS+GCI  EL TG+PLF G+NE+DQ
Sbjct: 183 TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ 242

Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD 381
           + +I E+LG P       A K   Y +      +  +K  D           L TI    
Sbjct: 243 LGRIFELLGTPNEDNWPQAKKLPLYTE------FTPRKPKD-----------LKTIFPNA 285

Query: 382 NGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           +                D +   DL+  +L  +P +RIS    L+HE+F
Sbjct: 286 S---------------DDAI---DLLQSLLKLNPLERISAKEALKHEYF 316

Length = 335

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  127 bits (319), Expect = 9e-33
 Identities = 79/242 (32%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKAD 167
           Y I   LG+GSFG+V  A D +    VA+K++     +K   + +   E+Q+L  +N   
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLN--- 55

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV-SLNLTKKFAQQLCCAL 225
            H   IVKL   F  +  L LV E +   +L +L++     G  S +       Q+  AL
Sbjct: 56  -HPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSAL 114

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC---------HVGQTLYQYIQS 276
            +L      IIH D+KPENILL       +K+IDFG +           +       + +
Sbjct: 115 EYLH--SKGIIHRDIKPENILL-DRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGT 171

Query: 277 RYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNE---VDQMTKIIEVLG 330
             Y +PEVLLG+       + D+WSLG  L EL TG P F G+       Q  KII  L 
Sbjct: 172 PGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP 231

Query: 331 MP 332
            P
Sbjct: 232 TP 233

Length = 384

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score =  126 bits (317), Expect = 1e-32
 Identities = 105/329 (31%), Positives = 152/329 (46%), Gaps = 39/329 (11%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  AFD      VA+K  K  +PF NQ   +    E +    +
Sbjct: 20  LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCV 77

Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I     H            Q+ 
Sbjct: 78  NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLLYQML 133

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG   +      +  Y+ +RYYR
Sbjct: 134 CGIKHLHSA--GIIHRDLKPSNIVVKSD--CTLKILDFGLARTACTNFMMTPYVVTRYYR 189

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ EL  G  +F G + +DQ  K+IE LG P    ++  
Sbjct: 190 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
             T +        +YV  +       + PG       L  D   P    R++   S A  
Sbjct: 250 QPTVR--------NYVENRP------QYPGISF--EELFPDWIFPSESERDKLKTSQA-- 291

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEF 429
              +DL+ +ML  DP KRIS    LRH +
Sbjct: 292 ---RDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  124 bits (313), Expect = 4e-32
 Identities = 98/340 (28%), Positives = 163/340 (47%), Gaps = 67/340 (19%)

Query: 112 YEIDTL------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLL 160
           +E+DT       +G+G++G V  A + E   +VAIK I N   F N+        E++LL
Sbjct: 1   FEVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANA--FDNRIDAKRTLREIKLL 58

Query: 161 EKINKADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
             ++  ++ + + I+       + + + +V+EL+  +L+ +IR++    +S +  + F  
Sbjct: 59  RHLDHENVIAIKDIMPPPHREAFND-VYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLY 115

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG---SSCHVGQTLYQY 273
           QL   L ++ S   +++H DLKP N+LL   C      +KI DFG   ++   G  + +Y
Sbjct: 116 QLLRGLKYIHSA--NVLHRDLKPSNLLLNANCD-----LKICDFGLARTTSEKGDFMTEY 168

Query: 274 IQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           + +R+YR+PE+LL    Y  AID+WS+GCI  EL   +PLF GK+ V Q+  I E+LG P
Sbjct: 169 VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228

Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILGVDNGGPGGRRR 390
                             S+      ++   R+    LP + R               R 
Sbjct: 229 ------------------SEEDLGFIRNEKARRYIRSLPYTPRQSF-----------ARL 259

Query: 391 NEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               + LA      DL+ +ML +DP KRI+    L H + 
Sbjct: 260 FPHANPLA-----IDLLEKMLVFDPSKRITVEEALAHPYL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  121 bits (305), Expect = 2e-31
 Identities = 93/320 (29%), Positives = 146/320 (45%), Gaps = 50/320 (15%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G++  V K  +      VA+K I    ++   + A  E+ L++++   +I     V+
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI-----VR 62

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIR-NTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           L      +N L LVFE +  +L   +  +     +  N  K F  QL   +AF    E  
Sbjct: 63  LHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH--ENR 120

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGI-PY 290
           ++H DLKP+N+L+   KR  +K+ DFG +   G    T    + + +YR+P+VLLG   Y
Sbjct: 121 VLHRDLKPQNLLI--NKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTY 178

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             +ID+WS+GCI+ E+ TG PLF G N  DQ+ KI  ++G P      G S+  +Y    
Sbjct: 179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY---- 234

Query: 351 SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM 410
                         K   P     D      +  P G                 DL+ R+
Sbjct: 235 --------------KPTFPRYPPQDLQQLFPHADPLG----------------IDLLHRL 264

Query: 411 LTYDPKKRISPTNVLRHEFF 430
           L  +P+ RIS  + L+H +F
Sbjct: 265 LQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  117 bits (295), Expect = 3e-30
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 18/224 (8%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK-IIKNKKP--FLNQAQIEVQLLEKINKAD 167
            Y++  L+G+G+FG V K  + E    VAIK I   K     L     E+ LL+ +    
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK--- 57

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   IVK  G     + L ++ E   + +L  +I+   F     +L   +  Q+   LA
Sbjct: 58  -HP-NIVKYIGSIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLA 113

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPE 283
           +L   E  +IH D+K  NIL    K   +K+ DFG +  +    +     + + Y+ +PE
Sbjct: 114 YLH--EQGVIHRDIKAANILT--TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPE 169

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           V+       A D+WSLGC ++EL TG P +   N +  + +I++
Sbjct: 170 VIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ 213

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  119 bits (300), Expect = 3e-30
 Identities = 100/339 (29%), Positives = 159/339 (46%), Gaps = 65/339 (19%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA-QI--EVQLLEKINKAD 167
           RY+I  ++GKGS+G V  A D     +VAIK I +    ++ A +I  E++LL  +   D
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 168 I-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKK----FAQQLC 222
           I   ++I+       +K+ + +VFEL+  +L+ +I+  +      +LT +    F  QL 
Sbjct: 61  IVEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLL 113

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQ-----YIQS 276
            AL ++ +   ++ H DLKP+NIL  +     +KI DFG +      T        Y+ +
Sbjct: 114 RALKYIHTA--NVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTAIFWTDYVAT 169

Query: 277 RYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           R+YR+PE L G     Y  AID+WS+GCI  E+ TG+PLF GKN V Q+  I ++LG P 
Sbjct: 170 RWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPS 228

Query: 334 GYLLHGA--SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
              +      K  +Y   +       KK      ++ P                      
Sbjct: 229 PETISRVRNEKARRYLSSMR------KKQPVPFSQKFPN--------------------- 261

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 AD +  + L+ R+L +DPK R +    L   +F
Sbjct: 262 ------ADPLALR-LLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  116 bits (294), Expect = 3e-30
 Identities = 95/322 (29%), Positives = 140/322 (43%), Gaps = 74/322 (22%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHS 170
           +EI   +GKG FG+V KA       +VAIK+IK   K    +   E+Q+L+K      H 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK----HP 57

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
             IVK  G +  K+ L +V E  S  +L +L+++TN   ++ +      ++L   L +L 
Sbjct: 58  -NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLH 115

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLG 287
           S    IIH D+K  NILL S     +K+IDFG S  +   +     + + Y+ +PEV+ G
Sbjct: 116 S--NGIIHRDIKAANILLTSDGE--VKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING 171

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF 347
            PYD   D+WSLG   +EL                       G PP            Y 
Sbjct: 172 KPYDYKADIWSLGITAIEL---------------------AEGKPP------------YS 198

Query: 348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI 407
           +                   LP  K L  I    NG PG R   +   S     +FKD +
Sbjct: 199 E-------------------LPPMKALFKI--ATNGPPGLRNPEK--WSD----EFKDFL 231

Query: 408 LRMLTYDPKKRISPTNVLRHEF 429
            + L  +P+KR +   +L+H F
Sbjct: 232 KKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score =  118 bits (296), Expect = 1e-29
 Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 41/330 (12%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 74  NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 129

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 130 CGIKHLHSA--GIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTSFMMTPYVVTRYYR 185

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245

Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD 399
                 Y +         K +  T  +  P           D+  P     N+   S A 
Sbjct: 246 QPTVRNYVENRP------KYAGLTFPKLFP-----------DSLFPADSEHNKLKASQA- 287

Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
               +DL+ +ML  DP KRIS    L+H +
Sbjct: 288 ----RDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score =  118 bits (296), Expect = 1e-29
 Identities = 106/348 (30%), Positives = 159/348 (45%), Gaps = 47/348 (13%)

Query: 95  DENYDYIIKHGEK---FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           D N+ Y ++ G+     L RY+    +G G+ G V  A+D   +  VAIK  K  +PF N
Sbjct: 7   DNNF-YSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQN 63

Query: 152 QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTN 205
           Q   +    E +    ++ + I+ L   FT +  L       +V EL+  NL  +I+   
Sbjct: 64  QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL 123

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            H            Q+ C +  L S    IIH DLKP NI++ S     +KI+DFG +  
Sbjct: 124 DH----ERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSD--CTLKILDFGLART 175

Query: 266 VGQTLYQ--YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
            G +     Y+ +RYYR+PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235

Query: 324 KIIEVLGMPPGYLLHGASKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD 381
           K+IE LG P    +     T + +  +R     Y  +K                  L  D
Sbjct: 236 KVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK------------------LFPD 277

Query: 382 NGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
              P     N+   S A     +DL+ +ML  D  KRIS    L+H +
Sbjct: 278 VLFPADSEHNKLKASQA-----RDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  116 bits (293), Expect = 1e-29
 Identities = 97/326 (29%), Positives = 146/326 (44%), Gaps = 60/326 (18%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKADIHSRYIV 174
           +G+G++G V +A D      VA+K ++  N++  +  + + E+ LL  +         IV
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-----RHPNIV 69

Query: 175 KLKGHFTWKNHL---CLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLS 229
           +LK       HL    LV E    +L +L+ N  T F   S +  K    QL   L +L 
Sbjct: 70  ELK-EVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPF---SESQVKCLMLQLLRGLQYLH 125

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLL 286
             E  IIH DLK  N+LL    +  +KI DFG +   G         + + +YR+PE+LL
Sbjct: 126 --ENFIIHRDLKVSNLLLTD--KGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLL 181

Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
           G   Y  AIDMW++GCIL EL   +PL  GK+E++Q+  II++LG P   +  G S    
Sbjct: 182 GCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241

Query: 346 YFDRLSDNSYVLKKST-DTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK 404
                    + L K   +  K + P                     +E G  L ++    
Sbjct: 242 V------GKFTLPKQPYNNLKHKFPWL-------------------SEAGLRLLNF---- 272

Query: 405 DLILRMLTYDPKKRISPTNVLRHEFF 430
                +L YDPKKR +    L   +F
Sbjct: 273 -----LLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  115 bits (291), Expect = 2e-29
 Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 19/229 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKKPFLNQ-AQIEVQLLEKINKA 166
           ++YE  + +G+GS+G V K  + E    VAIK  +     P + + A  E+++L+++   
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP 60

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCAL 225
           ++     V L   F  K  L LVFE   + + N L +N    GV  +L KK   Q   A+
Sbjct: 61  NL-----VNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAV 113

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSP 282
            F    + + IH D+KPENIL+   K+  IK+ DFG +  +   G     Y+ +R+YR+P
Sbjct: 114 NF--CHKHNCIHRDVKPENILIT--KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAP 169

Query: 283 EVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
           E+L+G   Y   +D+W++GC+  EL TG+PL+ GK++VDQ+  I + LG
Sbjct: 170 ELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  115 bits (290), Expect = 2e-29
 Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 57/324 (17%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V K  + +    VA+K I+    ++   + A  E+ LL+     ++    IV
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLK-----ELQHPNIV 62

Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALAFLSSPEL 233
            L+     ++ L L+FE LS +L   + +      +   L K +  Q+   + F  S   
Sbjct: 63  CLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR- 121

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIP- 289
            ++H DLKP+N+L+    +  IK+ DFG +   G  +  Y   + + +YR+PEVLLG P 
Sbjct: 122 -VLHRDLKPQNLLI--DNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPR 178

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY--- 346
           Y   +D+WS+G I  E+ T +PLF G +E+DQ+ +I  +LG P   +  G +    Y   
Sbjct: 179 YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238

Query: 347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL 406
           F +    S                 K LD     ++G                     DL
Sbjct: 239 FPKWKKGSLRSA------------VKNLD-----EDG--------------------LDL 261

Query: 407 ILRMLTYDPKKRISPTNVLRHEFF 430
           + +ML YDP KRIS    L H +F
Sbjct: 262 LEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  115 bits (289), Expect = 3e-29
 Identities = 95/328 (28%), Positives = 148/328 (45%), Gaps = 52/328 (15%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKAD 167
           +YE    +G+G++G V KA + E    VA+K ++   + +   + A  E+ LL+     +
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK-----E 55

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  + IV+L         L LVFE    +L     + N   +   + K F  QL   LAF
Sbjct: 56  LKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGD-IDPEIVKSFMFQLLKGLAF 114

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEV 284
             S   +++H DLKP+N+L+   K   +K+ DFG +   G  +  Y   + + +YR P+V
Sbjct: 115 CHSH--NVLHRDLKPQNLLI--NKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 170

Query: 285 LLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           L G   Y  +IDMWS GCI  EL + G PLF G +  DQ+ +I  +LG P      G SK
Sbjct: 171 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230

Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMK 402
              Y        Y +  +T +    +P                   + N  G        
Sbjct: 231 LPDYKP------YPMYPATTSLVNVVP-------------------KLNSTGR------- 258

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+  +L  +P +RIS    L+H +F
Sbjct: 259 --DLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  112 bits (282), Expect = 7e-28
 Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 64/339 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF  Q+ I  +   +  +   H
Sbjct: 17  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPF--QSIIHAKRTYRELRLLKH 72

Query: 170 SRY--IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ-- 219
            ++  ++ L   FT        N + LV  L+  +L N+++          LT    Q  
Sbjct: 73  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHVQFL 125

Query: 220 --QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
             Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+ +R
Sbjct: 126 IYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATR 181

Query: 278 YYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           +YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   L
Sbjct: 182 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241

Query: 337 LHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
           L   S  S   Y   L+               ++P     +  +G +             
Sbjct: 242 LKKISSESARNYIQSLT---------------QMPKMNFANVFIGANP------------ 274

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                     DL+ +ML  D  KRI+    L H +F ++
Sbjct: 275 -------LAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  112 bits (282), Expect = 7e-28
 Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 59/332 (17%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEKI 163
           RY     +G G++G V  A D     +VAIK  K  +PF  Q++I       E+ LL+ +
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIK--KLSRPF--QSEIFAKRAYRELTLLKHM 71

Query: 164 NKADI---HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
              ++      +   + G      +L + +      +   ++    H +S +  +    Q
Sbjct: 72  QHENVIGLLDVFTSAVSGDEFQDFYLVMPY------MQTDLQKIMGHPLSEDKVQYLVYQ 125

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
           + C L ++ S    IIH DLKP N  L   +   +KI+DFG + H    +  Y+ +R+YR
Sbjct: 126 MLCGLKYIHSA--GIIHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYR 181

Query: 281 SPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLH 338
           +PEV+L  + Y+  +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P P ++  
Sbjct: 182 APEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
              K +K        SY+         + LP   R D         P             
Sbjct: 242 LEDKAAK--------SYI---------KSLPKYPRKDFSTLFPKASPQA----------- 273

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 DL+ +ML  D  KR++ T  L H +F
Sbjct: 274 -----VDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  110 bits (276), Expect = 2e-27
 Identities = 101/332 (30%), Positives = 148/332 (44%), Gaps = 54/332 (16%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKIN 164
           L+ Y+    LG+GS+  V K         VA+K I+ +     PF   A  E  LL+ + 
Sbjct: 4   LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPF--TAIREASLLKDLK 61

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            A+I     V L      K  L LVFE L  +L   + +    G+S++  + F  QL   
Sbjct: 62  HANI-----VTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRG 115

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           LA+       ++H DLKP+N+L+   +R  +K+ DFG   +     +T    + + +YR 
Sbjct: 116 LAYCHQRR--VLHRDLKPQNLLI--SERGELKLADFGLARAKSVPSKTYSNEVVTLWYRP 171

Query: 282 PEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPPGYLLHG 339
           P+VLLG   Y  ++DMW +GCI  E+ TG PLF G  +  DQ+ KI  VLG P      G
Sbjct: 172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231

Query: 340 ASKTSKYFDRLSDNSYVLKK-STDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
            S   ++        Y              P   RLD I       P G           
Sbjct: 232 VSSNPEF------KPYSFPFYPPRPLINHAP---RLDRI-------PHG----------- 264

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                ++L L+ L Y+PKKRIS    ++H +F
Sbjct: 265 -----EELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  110 bits (276), Expect = 4e-27
 Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 71/349 (20%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKKP-FLNQAQIEVQLLEKINK 165
           L  YEI   LG+G+FG+V KA   +    VA+K  ++ N+K  F   A  E+++L+K+  
Sbjct: 7   LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH 66

Query: 166 ADI---------HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKK 216
            ++               + +G         +V   + ++L  L+ N +   ++ +  K 
Sbjct: 67  PNVVPLIDMAVERPDKSKRKRGSVY------MVTPYMDHDLSGLLENPSVK-LTESQIKC 119

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---------- 266
           +  QL   + +L      I+H D+K  NIL+    +  +KI DFG +             
Sbjct: 120 YMLQLLEGINYLHENH--ILHRDIKAANILI--DNQGILKIADFGLARPYDGPPPNPKGG 175

Query: 267 -GQTLYQY---IQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
            G    +Y   + +R+YR PE+LLG   Y  A+D+W +GC+  E+ T  P+  GK+++DQ
Sbjct: 176 GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ 235

Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD 381
           +  I ++ G P      G           S  +Y   ++ + R  +L             
Sbjct: 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY--PRTLEERFGKL------------- 280

Query: 382 NGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             GP G                 DL+ ++L+ DP KR++ ++ L H +F
Sbjct: 281 --GPEG----------------LDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  110 bits (276), Expect = 6e-27
 Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 76/355 (21%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLLEKI 163
           G +++D       LG GS G V  A D +   +VA+K I    P  +  A  E++++ ++
Sbjct: 4   GSRYMDLRP----LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL 59

Query: 164 NKADIHSRYIV---------KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNL 213
           +  +I   Y V         +  G  T  N + +V E +  +L N++      G +S   
Sbjct: 60  DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE----QGPLSEEH 115

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-------CHV 266
            + F  QL   L ++ S   +++H DLKP N+ + + +   +KI DFG +        H 
Sbjct: 116 ARLFMYQLLRGLKYIHSA--NVLHRDLKPANVFI-NTEDLVLKIGDFGLARIVDPHYSHK 172

Query: 267 GQTLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
           G  L + + +++YRSP +LL  P  Y  AIDMW+ GCI  E+ TG+PLF+G +E++QM  
Sbjct: 173 GY-LSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL 230

Query: 325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGG 384
           I+E + +                                R+E       +      ++GG
Sbjct: 231 ILESVPV-------------------------------VREEDRNELLNVIPSFVRNDGG 259

Query: 385 PGGRRRNEPGHSLADYM-----KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
                  EP   L D +     +  D + ++LT++P  R++    L H +   +S
Sbjct: 260 -------EPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  108 bits (272), Expect = 2e-26
 Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 70/342 (20%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           +RY+  T +G G++G V  A+D   + +VA+K  K  +PF  Q+ I       E++LL+ 
Sbjct: 15  ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVK--KLSRPF--QSLIHARRTYRELRLLKH 70

Query: 163 INKADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKK 216
           +   ++     + L   FT        N + LV  L+  +L N+++      +S    + 
Sbjct: 71  MKHENV-----IGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQF 122

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
              QL   L ++ S    IIH DLKP N+ +   +   ++I+DFG +      +  Y+ +
Sbjct: 123 LIYQLLRGLKYIHSA--GIIHRDLKPSNVAV--NEDCELRILDFGLARQADDEMTGYVAT 178

Query: 277 RYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PE++L  + Y+  +D+WS+GCI+ EL  G+ LF G + +DQ+ +I+EV+G P   
Sbjct: 179 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTP--- 235

Query: 336 LLHGASKTSKYFDRLSDNSYVLKK--STDTRK--ERLPGSKRLDTILGVDNGGPGGRRRN 391
                            +  VLKK  S   RK  + LP   + D         P      
Sbjct: 236 -----------------SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANP------ 272

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                LA      DL+ +ML  D  KRIS +  L H +F ++
Sbjct: 273 -----LA-----IDLLEKMLVLDSDKRISASEALAHPYFSQY 304

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  106 bits (268), Expect = 2e-26
 Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 23/215 (10%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           + KG++G+V  A         AIK+I  K   + + Q++  L E+   +   S Y+VKL 
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVI-KKADMIRKNQVDQVLTERDILSQAQSPYVVKLY 59

Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSPELS 234
             F  K +L LV E L   +L +L+ N      SL+  + + +  ++  AL +L S    
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVG----SLDEDVARIYIAEIVLALEYLHS--NG 113

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSR---------YYRSPE 283
           IIH DLKP+NIL+       +K+ DFG S    V + +      +          Y +PE
Sbjct: 114 IIHRDLKPDNILI--DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE 171

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           V+LG  +   +D WSLGCIL E   G P F G+  
Sbjct: 172 VILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP 206

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  106 bits (267), Expect = 5e-26
 Identities = 97/352 (27%), Positives = 156/352 (44%), Gaps = 59/352 (16%)

Query: 96  ENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQ 152
           + Y++        + +YE    +G+G+FG+V KA   + K  VA+K +     K+ F   
Sbjct: 1   DQYEFPFCDE---VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPIT 57

Query: 153 AQIEVQLLEKINKADIHSRYIV---KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV 209
           A  E+++L+ +   ++ +   +   K   +  +K    LVFE   ++L  L+ N N    
Sbjct: 58  ALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK-F 116

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCH 265
           +L+  KK  + L   L ++   +  I+H D+K  NIL+   K   +K+ DFG     S  
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILIT--KDGILKLADFGLARAFSLS 172

Query: 266 VGQTLYQY---IQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
                 +Y   + + +YR PE+LLG   Y   IDMW  GCI+ E+ T  P+  G  E  Q
Sbjct: 173 KNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ 232

Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD 381
           +T I ++ G          S T                      E  PG  +L+    ++
Sbjct: 233 LTLISQLCG----------SIT---------------------PEVWPGVDKLELFKKME 261

Query: 382 NGGPGGRRRNEPGHSLADYMKFK---DLILRMLTYDPKKRISPTNVLRHEFF 430
              P G++R      L  Y+K     DLI ++L  DP KRI     L H+FF
Sbjct: 262 L--PQGQKRKVK-ERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  107 bits (268), Expect = 7e-26
 Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 62/335 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ-----AQIEVQLLEKIN 164
           DRY     +G G++G V  A D     +VAIK  K  +PF ++     A  E++LL+ + 
Sbjct: 15  DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHMK 72

Query: 165 KADIHSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT    L       LV   +  +L  L+++     +S +  +   
Sbjct: 73  HENV-----IGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEK---LSEDRIQFLV 124

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
            Q+   L ++ +    IIH DLKP N  L   +   +KI+DFG +      +  Y+ +R+
Sbjct: 125 YQMLKGLKYIHAA--GIIHRDLKPGN--LAVNEDCELKILDFGLARQTDSEMTGYVVTRW 180

Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PEV+L  + Y   +D+WS+GCI+ E+ TG+PLF G + +DQ+ +I++V G P     
Sbjct: 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS---- 236

Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILGVDNGGPGGRRRNEPGH 395
                  ++  +L        +S D +   ++LP  ++ D    + N  P          
Sbjct: 237 ------KEFVQKL--------QSEDAKNYVKKLPRFRKKDFRSLLPNANP---------- 272

Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            LA      +++ +ML  D + RI+    L H +F
Sbjct: 273 -LA-----VNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  107 bits (269), Expect = 8e-26
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 57/331 (17%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKAD 167
           E D  +G G+FG V    D  +  +VA+K  K    F N         E+++L      +
Sbjct: 3   EPDRPIGYGAFGVVWSVTDPRDGKRVALK--KMPNVFQNLVSCKRVFRELKMLCFFKHDN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + S   +    H      + +V EL+  +L+ +I +     +S +  K F  Q+   L +
Sbjct: 61  VLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKY 118

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--------SSCHVGQTLYQYIQSRYY 279
           L S    I+H D+KP N+L+ S     +KI DFG         S H    + Q + ++YY
Sbjct: 119 LHSA--GILHRDIKPGNLLVNSNCV--LKICDFGLARVEEPDESKH----MTQEVVTQYY 170

Query: 280 RSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           R+PE+L+G   Y  A+D+WS+GCI  EL     LF  ++ + Q+  I ++LG P    + 
Sbjct: 171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
            A + ++        +++L+        + P    L T+             +E  H   
Sbjct: 231 SACEGAR--------AHILR-----GPHKPPSLPVLYTLSSQAT--------HEAVH--- 266

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
                  L+ RML +DP KRIS  + L H +
Sbjct: 267 -------LLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  106 bits (266), Expect = 1e-25
 Identities = 76/265 (28%), Positives = 110/265 (41%), Gaps = 53/265 (20%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +E+  ++G+G+FG+V    D +     A+K+++ K   + + QI     E+   AD  
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLR-KSDMIKRNQIAHVRAERDILADAD 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFE------LLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           S +IVKL   F  + HL LV E      L++     LIR            + +  +L  
Sbjct: 60  SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNL----LIR---KDVFPEETARFYIAELVL 112

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC--HVGQTLYQYIQSRY--- 278
           AL  +    L  IH D+KP+NIL+       IK+ DFG     +  +    Y+   +   
Sbjct: 113 ALDSVHK--LGFIHRDIKPDNILI--DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLL 168

Query: 279 ---------------------------YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
                                      Y +PEVL G PY L  D WSLG IL E+  G P
Sbjct: 169 FRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228

Query: 312 LFSGKNEVDQMTKII---EVLGMPP 333
            F      +   KII   E L  PP
Sbjct: 229 PFYSDTLQETYNKIINWKESLRFPP 253

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  102 bits (257), Expect = 7e-25
 Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 38/232 (16%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAI--KIIKNKKPFLNQAQIEVQ------LLEKINKADIH 169
           LGKG FG+V         CQV    K+   KK  L++ +++ +      L EK     + 
Sbjct: 1   LGKGGFGEVCA-------CQVKATGKMYACKK--LDKKRLKKRKGEQMALNEKKILEKVS 51

Query: 170 SRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           SR+IV L   F  K+ LCLV  L     L Y++YN+       G        +A Q+ C 
Sbjct: 52  SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNV----GEPGFPEARAIFYAAQIICG 107

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSP 282
           L  L   +  I++ DLKPEN+LL       ++I D G +  +  G+ +     +  Y +P
Sbjct: 108 LEHLH--QRRIVYRDLKPENVLL--DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAP 163

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG------KNEVDQMTKIIEV 328
           EVL G  YD ++D ++LGC L E+  G   F        K E+ + T  + V
Sbjct: 164 EVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  103 bits (259), Expect = 7e-25
 Identities = 103/352 (29%), Positives = 155/352 (44%), Gaps = 79/352 (22%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLE 161
           G++ +D+++I   +G+G++GQV KA D +    VA+K ++    K+ F   A  E+++L 
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILR 61

Query: 162 KINKADIHSRYIVKLKGHFTWKNH----------LCLVFELLSYNLYNLIRNTNFHGVSL 211
           ++N      R IV LK   T K              LVFE + ++L  L+ +   H  S 
Sbjct: 62  QLNH-----RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-FSE 115

Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY 271
           +  K F +QL   L +      + +H D+K  NILL +  +  IK+ DFG +      LY
Sbjct: 116 DHIKSFMKQLLEGLNYCHKK--NFLHRDIKCSNILLNN--KGQIKLADFGLA-----RLY 166

Query: 272 QYIQSR---------YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
              +SR         +YR PE+LLG   Y  AID+WS GCIL EL T +P+F    E+ Q
Sbjct: 167 NSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ 226

Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD 381
           +  I  + G P   +     K   +      N+   KK     + RL             
Sbjct: 227 LELISRLCGSPCPAVWPDVIKLPYF------NTMKPKK---QYRRRL------------- 264

Query: 382 NGGPGGRRRNE----PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
                   R E    P  +L       DL+  MLT DP KR +    L   +
Sbjct: 265 --------REEFSFIPTPAL-------DLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  100 bits (252), Expect = 3e-24
 Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 12/225 (5%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           E   +LG+GS G V K          A+K I        + Q+  +L  K  ++     Y
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLREL--KTLRSCES-PY 60

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +VK  G F  +  + +V E +   +L +L++      +   +    A+Q+   L +L + 
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHT- 117

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGI 288
           +  IIH D+KP N+L+ S  +  +KI DFG S  +  TL Q   ++ +  Y SPE + G 
Sbjct: 118 KRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE 175

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            Y  A D+WSLG  L+E   G+  F    +      +  +   PP
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP 220

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  101 bits (252), Expect = 4e-24
 Identities = 74/231 (32%), Positives = 120/231 (51%), Gaps = 13/231 (5%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
           +YE    +G+G++G+V KA D +   + VA+K ++ +      P     ++ V + LE  
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 61

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              ++   + V        +  L LVFE +  +L   +      GV     K    QL  
Sbjct: 62  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 121

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQ-YIQSRYYRS 281
            L FL S    ++H DLKP+NIL+ S  +  IK+ DFG +  +  Q      + + +YR+
Sbjct: 122 GLDFLHSHR--VVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRA 177

Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P
Sbjct: 178 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 228

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 99.3 bits (248), Expect = 1e-23
 Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 24/229 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++I   LG+GS+G V KA   E    VAIK++  ++        E+ +L++ +     S 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQE-IIKEISILKQCD-----SP 58

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA---QQLCCALAF 227
           YIVK  G +     L +V E      + ++++ TN    +L   ++ A    Q    L +
Sbjct: 59  YIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITN---KTLT-EEEIAAILYQTLKGLEY 114

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEV 284
           L S     IH D+K  NILL   +    K+ DFG S  +  T+ +    I + ++ +PEV
Sbjct: 115 LHS--NKKIHRDIKAGNILL--NEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           +  I Y+   D+WSLG   +E+  G+P +S   ++  M  I  +   PP
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYS---DIHPMRAIFMIPNKPP 216

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 97.9 bits (244), Expect = 3e-23
 Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 10/220 (4%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
            +++   LGKGS+G V K     +    A+K +      ++Q + E  + E    A ++ 
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS--MSQKEREDAVNEIRILASVNH 58

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAF 227
             I+  K  F   N LC+V E   + +L   I         +      +   QL   L  
Sbjct: 59  PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQA 118

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEVLL 286
           L   E  I+H DLK  NILL +     +KI D G S  + + +    I + +Y +PEV  
Sbjct: 119 LH--EQKILHRDLKSANILLVAN--DLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWK 174

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           G PY    D+WSLGC+L E+ T  P F  ++  D   K+ 
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ 214

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 96.9 bits (242), Expect = 7e-23
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 21/227 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V       +    A+K +K +       Q  +   EK    + +  +IVKL 
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFS-EKEILEECNHPFIVKLY 59

Query: 178 GHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA---LAFLSSPEL 233
             F  K ++ ++ E  L   L+ ++R          L  ++  +   A   LAF      
Sbjct: 60  RTFKDKKYIYMLMEYCLGGELWTILR-------DRGLFDEYTARFYIACVVLAFEYLHNR 112

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
            II+ DLKPEN+LL       +K++DFG +     GQ  + +  +  Y +PE++L   YD
Sbjct: 113 GIIYRDLKPENLLL--DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYD 170

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMT-----KIIEVLGMPP 333
            ++D WSLG +L EL TG P F   +E          K    L  P 
Sbjct: 171 FSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN 217

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 97.7 bits (243), Expect = 8e-23
 Identities = 95/324 (29%), Positives = 138/324 (42%), Gaps = 56/324 (17%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYI 173
           LG+GS+  V K         VA+K+I  K     PF   A  E  LL+ +  A+I     
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKTEEGVPF--TAIREASLLKGLKHANI----- 65

Query: 174 VKLKGHFTWKNHLCLVFELLSYNL--YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           V L      K  L  VFE +  +L  Y +      H  ++ L   F  QL   LA++   
Sbjct: 66  VLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRL---FMFQLLRGLAYIHGQ 122

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG- 287
              I+H DLKP+N+L+       +K+ DFG   +     QT    + + +YR P+VLLG 
Sbjct: 123 H--ILHRDLKPQNLLISY--LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA 178

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPPGYLLHGASKTSKY 346
             Y  A+D+W  GCI +E+  G+P F G ++V +Q+ KI  VLG+P      G SK   Y
Sbjct: 179 TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNY 238

Query: 347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL 406
                                    ++L  +                   L+   K +DL
Sbjct: 239 ---------------KPEWFLPCKPQQLRVVW----------------KRLSRPPKAEDL 267

Query: 407 ILRMLTYDPKKRISPTNVLRHEFF 430
             +ML   PK RIS  + L H +F
Sbjct: 268 ASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 97.0 bits (241), Expect = 1e-22
 Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 26/273 (9%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           + +EI   LG G+FG+V KA + E     A K+I+ K    ++ ++E  ++E    A  +
Sbjct: 12  EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCN 67

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
             YIVKL G F W   L ++ E       + I      G++    +   +Q+  AL +L 
Sbjct: 68  HPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH 127

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL 286
           S  + IIH DLK  N+LL       IK+ DFG S    +TL +   +I + Y+ +PEV++
Sbjct: 128 S--MKIIHRDLKAGNVLLT--LDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVM 183

Query: 287 -----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
                  PYD   D+WSLG  L+E+   EP     N +  + KI +    PP   L   S
Sbjct: 184 CETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPT--LSQPS 239

Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
           K S  F         LK + D   E  P + +L
Sbjct: 240 KWSMEFRDF------LKTALDKHPETRPSAAQL 266

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 97.1 bits (242), Expect = 2e-22
 Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 30/226 (13%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA----- 166
           ++I T +G+G +GQV  A   +    VA+K +K              LL K+N+      
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKK------------SLLFKLNEVRHVLT 50

Query: 167 --DI----HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
             DI     S ++VKL   F    +L L  E +   +   L+ N     +S +  + +  
Sbjct: 51  ERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV--LSEDHARFYMA 108

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY 279
           ++  A+  L   EL  IH DLKPEN L+       IK+ DFG S  +       + S  Y
Sbjct: 109 EMFEAVDALH--ELGYIHRDLKPENFLI--DASGHIKLTDFGLSKGIVTYANSVVGSPDY 164

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEVL G  YD  +D WSLGC+L E   G P FSG    +    +
Sbjct: 165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL 210

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 94.1 bits (235), Expect = 1e-21
 Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 24/227 (10%)

Query: 110 DRYEIDTLLGKGSFGQV--VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKA 166
           D +E    LG GSFG+V  V+     +    A+KI+  K   +   Q+E  L EK I ++
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYY--ALKILS-KAKIVKLKQVEHVLNEKRILQS 57

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVF------ELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
            I   ++V L G F   ++L LV       EL S+    L ++  F      + + +A Q
Sbjct: 58  -IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSH----LRKSGRF---PEPVARFYAAQ 109

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
           +  AL +L S  L I++ DLKPEN+LL S     IKI DFG +  V    Y    +  Y 
Sbjct: 110 VVLALEYLHS--LDIVYRDLKPENLLLDS--DGYIKITDFGFAKRVKGRTYTLCGTPEYL 165

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +PE++L   Y  A+D W+LG ++ E+  G P F   N +    KI+E
Sbjct: 166 APEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE 212

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 92.8 bits (230), Expect = 4e-21
 Identities = 92/320 (28%), Positives = 145/320 (45%), Gaps = 51/320 (15%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G++  V K      +  VA+K I+  +++     A  EV LL+ +  A+I     V 
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-----VT 67

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
           L      +  L LVFE L  +L   + N   + +S++  K F  QL   L++    +  I
Sbjct: 68  LHDIIHTERCLTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCH--KRKI 124

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG-IPYD 291
           +H DLKP+N+L+   ++  +K+ DFG   +     +T    + + +YR P+VLLG   Y 
Sbjct: 125 LHRDLKPQNLLI--NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS 182

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
             IDMW +GCIL E+ TG P+F G    +++  I  +LG P      G +   ++     
Sbjct: 183 TPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF----- 237

Query: 352 DNSYVLKK-STDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM 410
             SY+  +          P   RLDT  G+                        DL+  +
Sbjct: 238 -RSYLFPQYRAQPLINHAP---RLDTD-GI------------------------DLLSSL 268

Query: 411 LTYDPKKRISPTNVLRHEFF 430
           L Y+ K RIS    LRH +F
Sbjct: 269 LLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 91.0 bits (226), Expect = 8e-21
 Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 30/249 (12%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKII------KNKKPFLNQAQIEVQLLEKINKADIHS 170
           LLG+G+FG+V   +D +   ++A+K +         K  +N  + E+QLL+ +     H 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ----HE 64

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQQLCCALAFL 228
           R IV+  G       L +  E +   ++ + ++    +G ++  +T+K+ +Q+   + +L
Sbjct: 65  R-IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYL 120

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------CHVGQTLYQYIQSRYYRSP 282
            S    I+H D+K  NIL  S     +K+ DFG+S      C  G  +     + Y+ SP
Sbjct: 121 HSNM--IVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSP 176

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL-HGAS 341
           EV+ G  Y    D+WS+GC +VE+ T +P +    E + M  I ++   P    L    S
Sbjct: 177 EVISGEGYGRKADVWSVGCTVVEMLTEKPPW---AEFEAMAAIFKIATQPTNPQLPSHVS 233

Query: 342 KTSKYFDRL 350
             ++ F R 
Sbjct: 234 PDARNFLRR 242

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 21/228 (9%)

Query: 118 LGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
           LG+G+FG+V K         ++ +VA+K +K         +   E +++ K++    H  
Sbjct: 7   LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD----H-P 61

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            IVKL G  T +  L +V E +   +L + +R      +SL+    FA Q+   + +L S
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES 121

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--YR--SPEVLL 286
              + IH DL   N L+       +KI DFG S  +    Y  ++      R  +PE L 
Sbjct: 122 --KNFIHRDLAARNCLVGENLV--VKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLK 177

Query: 287 GIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
              +    D+WS G +L E+ T GE  + G +  + +  + +   +P 
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPK 225

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 25/230 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-----KNKKPFLNQAQIEVQLLEKINKA 166
           YE+   +GKGSFG V K     +   +  K I       K+    Q   EV +L ++   
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEK--QQLVSEVNILRELK-- 57

Query: 167 DIHSRYIVKLKGHF--TWKNHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQL 221
             H   IV+            L +V E     +L  LI+        +      +   QL
Sbjct: 58  --H-PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQL 114

Query: 222 CCALA---FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQ 275
             AL      S P  +++H DLKP NI L +   + +K+ DFG +  +G        Y+ 
Sbjct: 115 LLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSFAKTYVG 172

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           + YY SPE L  + YD   D+WSLGC++ EL    P F+ +N++   +KI
Sbjct: 173 TPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI 222

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 88.9 bits (220), Expect = 8e-20
 Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 30/228 (13%)

Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LGKG FG+V    V+A      C+   K    K+   + A  E Q+LEK+N     SR+
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-----SRF 61

Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +V L   +  K+ LCLV  L     L +++Y++       G        +A ++CC L  
Sbjct: 62  VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM----GEAGFEEGRAVFYAAEICCGLED 117

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
           L      I++ DLKPENILL       I+I D G + HV  GQT+   + +  Y +PEV+
Sbjct: 118 LHQER--IVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 173

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFS------GKNEVDQMTKIIE 327
               Y  + D W+LGC+L E+  G+  F        + EV+++ K ++
Sbjct: 174 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 88.2 bits (219), Expect = 9e-20
 Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 32/233 (13%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G G+FG+V  A + +    +A+K I+   N    + +   E+++LE +   ++   Y V
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGV 67

Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSP 231
           ++  H   +  + +  E  S   L  L+     HG  L  ++ + +  QL   LA+L S 
Sbjct: 68  EV--H---REKVYIFMEYCSGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHSH 118

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-------GQTLYQYIQSRYYRSPEV 284
              I+H D+KP NI L       IK+ DFG +  +       G+ +     +  Y +PEV
Sbjct: 119 --GIVHRDIKPANIFL--DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174

Query: 285 LLGIPYD---LAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPP 333
           + G        A D+WSLGC+++E+ TG+  +S   NE   M  +    G  P
Sbjct: 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHV--GAGHKP 225

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 87.9 bits (219), Expect = 9e-20
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)

Query: 113 EIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKA 166
           E+   LG+G+FG+V K          + +VA+K +K       + +   E  +++K++  
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS-- 59

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
             H   IV+L G  T    L +V E +   +L + +R    HG  L L    + A Q+  
Sbjct: 60  --H-PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRK---HGEKLTLKDLLQMALQIAK 113

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR-- 280
            + +L S   + +H DL   N L+       +KI DFG        L + I    YYR  
Sbjct: 114 GMEYLES--KNFVHRDLAARNCLVTENLV--VKISDFG--------LSRDIYEDDYYRKR 161

Query: 281 ----------SPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVL 329
                     +PE L    +    D+WS G +L E+ T GE  + G +  + +  + +  
Sbjct: 162 GGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGY 221

Query: 330 GMPP 333
            +P 
Sbjct: 222 RLPR 225

Length = 258

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 88.5 bits (219), Expect = 1e-19
 Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 49/319 (15%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G++  V K      +  VA+K I+  +++     A  EV LL+ +  A+I     V 
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VT 68

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
           L         L LVFE L  +L   + +   + +S++  K F  Q+   LA+    +  +
Sbjct: 69  LHDIVHTDKSLTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK--V 125

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YD 291
           +H DLKP+N+L+   +R  +K+ DFG   +     +T    + + +YR P+VLLG   Y 
Sbjct: 126 LHRDLKPQNLLI--NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 183

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
             IDMW +GCI  E+ +G PLF G    D++  I  +LG P      G S   ++     
Sbjct: 184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF----- 238

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
             +Y   K     +  +  + RLDT                         +  +L+ + L
Sbjct: 239 -KNYNFPKYKP--QPLINHAPRLDT-------------------------EGIELLTKFL 270

Query: 412 TYDPKKRISPTNVLRHEFF 430
            Y+ KKRIS    ++H +F
Sbjct: 271 QYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 88.3 bits (219), Expect = 1e-19
 Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 38/220 (17%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQV-------AIKIIKNKKPFLNQAQI----EVQLLEKINK 165
           +LGKG FG+V         CQV       A K ++ K+    + +     E Q+LEK+N 
Sbjct: 7   VLGKGGFGEVCA-------CQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN- 58

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
               SR++V L   +  K+ LCLV  L     L +++YN+       G        +A +
Sbjct: 59  ----SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNP----GFDEERAVFYAAE 110

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRY 278
           + C L  L      I++ DLKPENILL       I+I D G +  +  G+T+   + +  
Sbjct: 111 ITCGLEDLHRER--IVYRDLKPENILL--DDYGHIRISDLGLAVEIPEGETIRGRVGTVG 166

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           Y +PEV+    Y  + D W LGC++ E+  G+  F  + E
Sbjct: 167 YMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 31/272 (11%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
             +E+  ++G+G++G+V KA   +    VAIKI+   +    + + E  +L K +    +
Sbjct: 6   GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS----N 61

Query: 170 SRYIVKLKGHFTWKNHLC------LVFELLSY-NLYNLIRNTNFHGVSL--NLTKKFAQQ 220
              I    G F  KN         LV EL    ++ +L++     G  L         ++
Sbjct: 62  HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSR 277
               LA+L   E  +IH D+K +NILL   K + +K++DFG S  +  TL +   +I + 
Sbjct: 122 TLRGLAYLH--ENKVIHRDIKGQNILLT--KNAEVKLVDFGVSAQLDSTLGRRNTFIGTP 177

Query: 278 YYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           Y+ +PEV+         YD   D+WSLG   +EL  G+P     + +  + KI      P
Sbjct: 178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---NP 234

Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTR 364
           P  L    + + K+ D +S+    L K+ + R
Sbjct: 235 PPTLKSPENWSKKFNDFISE---CLIKNYEQR 263

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 88.1 bits (218), Expect = 2e-19
 Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 59/325 (18%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G++  V K         VA+K I+  +++     A  EV LL+ +  A+I     V 
Sbjct: 14  LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VT 68

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
           L      +  L LVFE L  +L   + +   + ++++  K F  QL   L +    +  +
Sbjct: 69  LHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRK--V 125

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG-IPYD 291
           +H DLKP+N+L+   +R  +K+ DFG   +     +T    + + +YR P++LLG   Y 
Sbjct: 126 LHRDLKPQNLLI--NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYS 183

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PGYLLHGASKTSKY 346
             IDMW +GCI  E+ TG PLF G    +Q+  I  +LG P     PG L +   K+  Y
Sbjct: 184 TQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243

Query: 347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL 406
                      K   D      P   RLD+     +G                     +L
Sbjct: 244 ----------PKYRADCLHNHAP---RLDS-----DGA--------------------EL 265

Query: 407 ILRMLTYDPKKRISPTNVLRHEFFL 431
           + ++L ++ +KRIS    ++H +F 
Sbjct: 266 LSKLLQFEGRKRISAEEAMKHPYFH 290

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 86.8 bits (215), Expect = 3e-19
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 11/210 (5%)

Query: 120 KGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVKLKG 178
           KG+FG V  A         AIK++K K   + + Q+     E+ I      S Y+ KL  
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIKVLK-KSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYY 64

Query: 179 HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
            F  K++L LV E L+  +  +LI+     G+  +  K++  ++   +  L   +  IIH
Sbjct: 65  SFQSKDYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLH--QRGIIH 120

Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMW 297
            D+KPEN+L+   +   +K+ DFG S   G    +++ +  Y +PE +LG+  D   D W
Sbjct: 121 RDIKPENLLI--DQTGHLKLTDFGLS-RNGLENKKFVGTPDYLAPETILGVGDDKMSDWW 177

Query: 298 SLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           SLGC++ E   G P F      D +   I 
Sbjct: 178 SLGCVIFEFLFGYPPFHA-ETPDAVFDNIL 206

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 86.4 bits (215), Expect = 3e-19
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 24/229 (10%)

Query: 118 LGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
           LG+G+FG+V K        ++K +VA+K +K         +   E +++ K++    H  
Sbjct: 7   LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD----H-P 61

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            +VKL G  T +  L +V E +   +L + +R      +SL+    FA Q+   + +L S
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR-PKLSLSDLLSFALQIARGMEYLES 120

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS-----RYYRSPEVL 285
              + IH DL   N L+       +KI DFG S  +    Y   +      R+  +PE L
Sbjct: 121 --KNFIHRDLAARNCLVGENLV--VKISDFGLSRDLYDDDYYRKRGGKLPIRWM-APESL 175

Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
               +    D+WS G +L E+ T GE  + G +  + +  +     +P 
Sbjct: 176 KEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQ 224

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 86.5 bits (215), Expect = 4e-19
 Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 29/216 (13%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
            +     E    +G+G+ G+V KA D     +VAIK ++ +K        E+ +++    
Sbjct: 18  RELYKNLEK---IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMK---- 70

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLC 222
            D     IV     +   + L +V E +    L ++I     + V +N  +     +++ 
Sbjct: 71  -DCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIIT---QNFVRMNEPQIAYVCREVL 126

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR----- 277
             L +L S   ++IH D+K +NILL   K  ++K+ DFG      Q L +    R     
Sbjct: 127 QGLEYLHS--QNVIHRDIKSDNILL--SKDGSVKLADFG---FAAQ-LTKEKSKRNSVVG 178

Query: 278 --YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
             Y+ +PEV+    Y   +D+WSLG + +E+  GEP
Sbjct: 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 86.2 bits (213), Expect = 6e-19
 Identities = 72/225 (32%), Positives = 109/225 (48%), Gaps = 30/225 (13%)

Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LGKG FG+V    V+A      C+   K    K+     A  E ++LEK+N     SR+
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-----SRF 61

Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +V L   +  K+ LCLV  +     L +++YN+  N  F          +A +LCC L  
Sbjct: 62  VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIF---YAAELCCGLED 117

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
           L      I++ DLKPENILL    R  I+I D G +  +  G+T+   + +  Y +PEV+
Sbjct: 118 LQRER--IVYRDLKPENILL--DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVI 173

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFS------GKNEVDQMTK 324
               Y  + D W LGC++ E+  G+  F        + EVD+  K
Sbjct: 174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK 218

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 85.6 bits (212), Expect = 7e-19
 Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 21/227 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKII------KNKKPFLNQAQIEVQLLEKINKADIHS 170
           LLG GSFG V +  + ++    A+K +      +  +  + Q + E+ LL K+   +I  
Sbjct: 7   LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-- 64

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              V+  G    +++L +  EL+   +L  L++   +      + + + +Q+   L +L 
Sbjct: 65  ---VQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLH 119

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLG 287
               + +H D+K  NIL+       +K+ DFG +  V +      +  S Y+ +PEV+  
Sbjct: 120 DR--NTVHRDIKGANILV--DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQ 175

Query: 288 I-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
              Y LA D+WSLGC ++E+ TG+P +S    V  + KI     +PP
Sbjct: 176 QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP 222

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 85.8 bits (212), Expect = 8e-19
 Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LGKG FG+V    VK       C+   K    KK     A +E ++LEK+N     S +I
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-----SPFI 55

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V L   F  K HLCLV  L++  +L   I N    G+ +     ++ Q+ C +  L S  
Sbjct: 56  VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS-- 113

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPY 290
           + I++ D+KPEN+LL    +   ++ D G +  +  G+T+ Q   +  Y +PE+L   PY
Sbjct: 114 MDIVYRDMKPENVLL--DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPY 171

Query: 291 DLAIDMWSLGCILVELHTGE-PLFSGKNEVDQ 321
              +D +++GC + E+  G  P    K +V +
Sbjct: 172 SYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 84.4 bits (208), Expect = 3e-18
 Identities = 90/330 (27%), Positives = 139/330 (42%), Gaps = 52/330 (15%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINK 165
           D YE    LG+GS+  V K         VA+K+I+ ++    PF   A  E  LL+ +  
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPF--TAIREASLLKGLKH 62

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           A+I     V L      K  L LVFE +  +L   + + +  G+     K F  QL   L
Sbjct: 63  ANI-----VLLHDIIHTKETLTLVFEYVHTDLCQYM-DKHPGGLHPENVKLFLFQLLRGL 116

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSP 282
           +++   +  I+H DLKP+N+L+       +K+ DFG   +      T    + + +YR P
Sbjct: 117 SYIH--QRYILHRDLKPQNLLISDT--GELKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172

Query: 283 EVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPPGYLLHGA 340
           +VLLG   Y   +DMW +GCI VE+  G   F G  ++ DQ+ +I  VLG P      G 
Sbjct: 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
                +        + L    + R                           +  + L+  
Sbjct: 233 HSLPHF----KPERFTLYSPKNLR---------------------------QAWNKLSYV 261

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              +DL  ++L   PK R+S    L HE+F
Sbjct: 262 NHAEDLASKLLQCFPKNRLSAQAALSHEYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 83.3 bits (206), Expect = 4e-18
 Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKAD 167
            Y    +LGKG+FG+       E+   V  K +   +        A  E+ +L  +   +
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I + Y      HF   N L +  E  +   LY+ I           +   +  Q+  A++
Sbjct: 61  IIAYY-----NHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVS 115

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS----RYYRSP 282
           ++   +  I+H D+K  NI L   K   IK+ DFG S  +G + Y   ++     YY SP
Sbjct: 116 YIH--KAGILHRDIKTLNIFLT--KAGLIKLGDFGISKILG-SEYSMAETVVGTPYYMSP 170

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           E+  G+ Y+   D+W+LGC+L EL T +  F   N ++ + KI++
Sbjct: 171 ELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 83.9 bits (207), Expect = 4e-18
 Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 24/213 (11%)

Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LGKG FG+V    V+A      C+   K    K+   + A  E Q+LEK+N     S++
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-----SQF 61

Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +V L   +  K+ LCLV  +     L +++YN+  N  F          +A ++ C L  
Sbjct: 62  VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNM-GNPGFEEERALF---YAAEILCGLED 117

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
           L     + ++ DLKPENILL       I+I D G +  +  G+++   + +  Y +PEVL
Sbjct: 118 LHRE--NTVYRDLKPENILL--DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVL 173

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
               Y L+ D W LGC++ E+  G+  F G+ E
Sbjct: 174 NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 82.9 bits (205), Expect = 5e-18
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 16/222 (7%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +EI   +GKGSFG V K     +K   A+K I   K  +N+ + E  + E    A + S 
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK--MNRREREEAIDEARVLAKLDSS 59

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           YI++    F  K  L +V E     +L+ L++      +  +   +F  Q+   LA L S
Sbjct: 60  YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS 119

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQSRYYRSPEV 284
            +  I+H D+K  N+ L       +KI D G       + +   T+   + + YY SPE+
Sbjct: 120 KK--ILHRDIKSLNLFL--DAYDNVKIGDLGVAKLLSDNTNFANTI---VGTPYYLSPEL 172

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
               PY+   D+W+LG +L E  TG+  F   N+   + KII
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKII 214

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 83.8 bits (207), Expect = 6e-18
 Identities = 71/225 (31%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +GKGSFG+V++    + +   A+K I+ K   ++++++   L E+   A ++  +IV LK
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIR-KAHIVSRSEVTHTLAERTVLAQVNCPFIVPLK 59

Query: 178 GHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             F     L LV   ++     ++L R   F    L+  + +  +L CAL  L   + ++
Sbjct: 60  FSFQSPEKLYLVLAFINGGELFHHLQREGRF---DLSRARFYTAELLCALENLH--KFNV 114

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----QTLYQYIQSRYYRSPEVLLGIPYD 291
           I+ DLKPENILL    +  I + DFG  C +          +  +  Y +PE+LLG  Y 
Sbjct: 115 IYRDLKPENILL--DYQGHIALCDFGL-CKLNMKDDDKTNTFCGTPEYLAPELLLGHGYT 171

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII-EVLGMPPGY 335
            A+D W+LG +L E+ TG P F  +N  +   KI+ E L  P G+
Sbjct: 172 KAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGF 216

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 82.9 bits (205), Expect = 8e-18
 Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 49/283 (17%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADI 168
           R E   L+G+G++G V +         VA+KII    P  + + I  EV LL ++ ++  
Sbjct: 5   RLE---LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQP 61

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL-NLTK--KFAQQLCC-- 223
            +  I K  G +     L ++ E                G S+  L K    A++     
Sbjct: 62  PN--ITKYYGSYLKGPRLWIIMEY-------------AEGGSVRTLMKAGPIAEKYISVI 106

Query: 224 ------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YI 274
                 AL ++    + +IH D+K  NIL+ +     +K+ DFG +  + Q   +   ++
Sbjct: 107 IREVLVALKYIHK--VGVIHRDIKAANILVTNTGN--VKLCDFGVAALLNQNSSKRSTFV 162

Query: 275 QSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            + Y+ +PEV+  G  YD   D+WSLG  + E+ TG P +S  +    M  I +    PP
Sbjct: 163 GTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK--SKPP 220

Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDT 376
               +G SK  + F      +  L +     KERL   + L +
Sbjct: 221 RLEDNGYSKLLREF-----VAACLDEEP---KERLSAEELLKS 255

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 82.4 bits (203), Expect = 1e-17
 Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 22/263 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           + +EI   LG G+FG+V KA + E     A K+I  K    ++ ++E  ++E    A   
Sbjct: 5   EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCD 60

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              IVKL   F ++N+L ++ E  +    + +       ++    +   +Q   AL +L 
Sbjct: 61  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH 120

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL 286
             E  IIH DLK  NIL        IK+ DFG S    +T+ +   +I + Y+ +PEV++
Sbjct: 121 --ENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 176

Query: 287 -----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
                  PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  L   + 
Sbjct: 177 CETSKDRPYDYKADVWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSEPPTLAQPSR 233

Query: 342 KTSKYFDRLSDNSYVLKKSTDTR 364
            +S++ D L      L+K+ D R
Sbjct: 234 WSSEFKDFLKK---CLEKNVDAR 253

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 22/263 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +EI   LG G+FG+V KA   E     A KII+ +    ++ ++E  ++E    ++  
Sbjct: 5   DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECK 60

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              IV L   + ++N L ++ E       + I      G++    +   +Q+  AL FL 
Sbjct: 61  HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH 120

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL 286
           S +  +IH DLK  NILL       +K+ DFG S     TL +   +I + Y+ +PEV+ 
Sbjct: 121 SHK--VIHRDLKAGNILLTL--DGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVA 176

Query: 287 -----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
                  PYD   D+WSLG  L+EL   EP     +E++ M  ++++L   P  L   + 
Sbjct: 177 CETFKDNPYDYKADIWSLGITLIELAQMEP---PHHELNPMRVLLKILKSEPPTLDQPSK 233

Query: 342 KTSKYFDRLSDNSYVLKKSTDTR 364
            +S + D L      L K  D R
Sbjct: 234 WSSSFNDFLKS---CLVKDPDDR 253

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 81.5 bits (201), Expect = 2e-17
 Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 28/232 (12%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKIN 164
           RY +   LGKGSFG V    D +   +  +K++K             QA  E QLL K++
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHG--VSLNLTKKFAQQL 221
              I     VK    F  ++  C++ E     +L   +      G  +S N   ++  QL
Sbjct: 61  HPAI-----VKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQL 115

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQ 275
              + ++   +  I+H DLK +NI L   K + +KI DFG       SC +  T      
Sbjct: 116 LLGVHYMH--QRRILHRDLKAKNIFL---KNNLLKIGDFGVSRLLMGSCDLATTF---TG 167

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           + YY SPE L    YD   D+WSLGCIL E+      F G+N +  + +I+E
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE 219

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 20/244 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
           + + +   +GKGSFG+V KA D      VAIK+I      L +A+ E++ +++ I   + 
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLSQ 55

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YI K  G F   + L ++ E     +  +L++        +       +++   L 
Sbjct: 56  CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAF---ILREVLLGLE 112

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPE 283
           +L       IH D+K  NILL   +   +K+ DFG S  +  T+ +   ++ + ++ +PE
Sbjct: 113 YLHEEGK--IHRDIKAANILLS--EEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPE 168

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
           V+    YD   D+WSLG   +EL  GEP  S  + +  +  I +    PP    +  SK 
Sbjct: 169 VIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK--NNPPSLEGNKFSKP 226

Query: 344 SKYF 347
            K F
Sbjct: 227 FKDF 230

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 81.0 bits (201), Expect = 3e-17
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 29/208 (13%)

Query: 118 LGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRY 172
           LG+G+FG+V K        +  +VA+K +K       +     E ++++K+     H   
Sbjct: 3   LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG----H-PN 57

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-------KFAQQLCCA 224
           +V+L G  T +  L LV E +   +L + +R +     S   +         FA Q+   
Sbjct: 58  VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS------RY 278
           + +L+S     +H DL   N L+       +KI DFG S  V    Y   ++      R+
Sbjct: 118 MEYLAS--KKFVHRDLAARNCLVGEDLV--VKISDFGLSRDVYDDDYYRKKTGGKLPIRW 173

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVEL 306
             +PE L    +    D+WS G +L E+
Sbjct: 174 M-APESLKDGIFTSKSDVWSFGVLLWEI 200

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 80.9 bits (200), Expect = 4e-17
 Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 10/220 (4%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D  E    +G G+FG+V    D   +   A+K++      +   Q +    EK    ++ 
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVM-AIPEVIRLKQEQHVHNEKRVLKEVS 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
             +I++L      +  L ++ E +    L++ +RN+   G   N T  F A ++ CAL +
Sbjct: 60  HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEY 116

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S    I++ DLKPENILL   K   IK+ DFG +  +    +    +  Y +PEV+  
Sbjct: 117 LHS--KEIVYRDLKPENILL--DKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQS 172

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
             ++ A+D W+LG ++ E+  G P F   N      KI+ 
Sbjct: 173 KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA 212

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 81.4 bits (201), Expect = 5e-17
 Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 21/229 (9%)

Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIV 174
            ++GKGSFG+V+ A    +    A+K++  KK  L + + +  + E+ +   ++   ++V
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVL-QKKAILKKKEQKHIMAERNVLLKNVKHPFLV 59

Query: 175 KLKGHFTWKNHLCLVFELLSYN----LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            L  H++++    L F L   N     ++L R  +F        + +A ++  AL +L S
Sbjct: 60  GL--HYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPR---ARFYAAEIASALGYLHS 114

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----QTLYQYIQSRYYRSPEVLL 286
             L+II+ DLKPENILL S  +  + + DFG  C  G    +T   +  +  Y +PEVL 
Sbjct: 115 --LNIIYRDLKPENILLDS--QGHVVLTDFGL-CKEGIEHSKTTSTFCGTPEYLAPEVLR 169

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII-EVLGMPPG 334
             PYD  +D W LG +L E+  G P F  ++  +    I+ + L + P 
Sbjct: 170 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPN 218

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 80.9 bits (200), Expect = 6e-17
 Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V+ A         A+K++K K   L    +E  + EK  +  A  H  ++ 
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVLK-KDVILQDDDVECTMTEKRVLALAGKHP-FLT 59

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           +L   F  K+ L  V E ++    ++++ R+  F        + +A ++   L FL   E
Sbjct: 60  QLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRF---DEPRARFYAAEIVLGLQFLH--E 114

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH---VGQTLYQYIQSRYYRSPEVLLGIP 289
             II+ DLK +N+LL       IKI DFG        G T   +  +  Y +PE+L   P
Sbjct: 115 RGIIYRDLKLDNVLL--DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP 172

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Y  A+D W+LG +L E+  G+  F G +E +    I+E
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE 210

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 25/237 (10%)

Query: 117 LLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLNQ-----AQIEVQLLEKINKADI 168
           +LGKG +G+V  V+     +  ++ A+K++K      NQ      + E  +LE +     
Sbjct: 3   VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK---- 58

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
              +IV L   F     L L+ E LS     L  +    G+ +  T  F   ++  AL  
Sbjct: 59  -HPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMHLEREGIFMEDTACFYLSEISLALEH 115

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEV 284
           L      II+ DLKPENILL    +  +K+ DFG    S H G   + +  +  Y +PE+
Sbjct: 116 LHQ--QGIIYRDLKPENILL--DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI 171

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGYLLHGA 340
           L+   +  A+D WSLG ++ ++ TG P F+ +N    + KI++  L +PP YL   A
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP-YLTPEA 227

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 79.7 bits (196), Expect = 1e-16
 Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 64/343 (18%)

Query: 118 LGKGSFGQVVKAF--DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +G+G++G V KA   D ++    A+K I+     ++  + E+ LL ++   ++ S   V 
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACR-EIALLRELKHPNVISLQKVF 67

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVS----------LNLTKKFAQQLCCAL 225
           L  H   K  + L+F+   ++L+++I+   FH  S            + K    Q+   +
Sbjct: 68  LS-HADRK--VWLLFDYAEHDLWHIIK---FHRASKANKKPVQLPRGMVKSLLYQILDGI 121

Query: 226 AFLSSPELSIIHCDLKPENILLCS--PKRSAIKIID------FGSSCHVGQTLYQYIQSR 277
            +L +    ++H DLKP NIL+    P+R  +KI D      F S       L   + + 
Sbjct: 122 HYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 179

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQMTKIIE 327
           +YR+PE+LLG   Y  AID+W++GCI  EL T EP+F  + E          DQ+ +I  
Sbjct: 180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
           V+G P       A K  +   ++ ++S ++K   D R+        +  +          
Sbjct: 240 VMGFP-------ADKDWEDIKKMPEHSTLMK---DFRRNTYTNCSLIKYM---------- 279

Query: 388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  H +    K   L+ ++LT DP KRI+    ++  +F
Sbjct: 280 -----EKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 19/237 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG G+ G V K         +A+K I+      + Q QI  +L   I     +S YIV  
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAI-QKQILREL--DILH-KCNSPYIVGF 64

Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
            G F     + +  E +     + I       +   +  K A  +   L +L   +  II
Sbjct: 65  YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE-KHKII 123

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLLGIPYDLAID 295
           H D+KP NIL+ S  R  IK+ DFG S  +  +L + ++ +  Y +PE + G  Y +  D
Sbjct: 124 HRDVKPSNILVNS--RGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSD 181

Query: 296 MWSLGCILVELHTGEPLFSGKNE-----VDQMTKIIEVLGMPPGYLLHGASKTSKYF 347
           +WSLG  L+EL TG   +  +N+      + +  I+     PP  L   + K S  F
Sbjct: 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPPRL--PSGKFSPDF 233

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 94/352 (26%), Positives = 153/352 (43%), Gaps = 82/352 (23%)

Query: 118 LGKGSFGQVVKAF--DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +G+G++G V KA   D +++ + A+K I+     ++  + E+ LL ++   ++ +   V 
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACR-EIALLRELKHPNVIALQKVF 67

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVS----------LNLTKKFAQQLCCAL 225
           L  H   K  + L+F+   ++L+++I+   FH  S           ++ K    Q+   +
Sbjct: 68  LS-HSDRK--VWLLFDYAEHDLWHIIK---FHRASKANKKPMQLPRSMVKSLLYQILDGI 121

Query: 226 AFLSSPELSIIHCDLKPENILLCS--PKRSAIKIID------FGSSCHVGQTLYQYIQSR 277
            +L +    ++H DLKP NIL+    P+R  +KI D      F S       L   + + 
Sbjct: 122 HYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 179

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQMTKIIE 327
           +YR+PE+LLG   Y  AID+W++GCI  EL T EP+F  + E          DQ+ +I  
Sbjct: 180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
           V+G P                         K   D RK  +P    L             
Sbjct: 240 VMGFPAD-----------------------KDWEDIRK--MPEYPTLQKDF--------- 265

Query: 388 RRRNEPGHSLADYM---------KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           RR      SL  YM         K   L+ ++LT DP KRI+    L+  +F
Sbjct: 266 RRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 78.1 bits (193), Expect = 3e-16
 Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 22/214 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           +E+  ++GKG+FG+V      + K   A+K + NK+  + +  +     E ++L+++N  
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYM-NKQKCVEKGSVRNVLNERRILQELN-- 58

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNL-YNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             H  ++V L   F  + ++ LV +LL   +L Y+L +   F   S    K +  ++  A
Sbjct: 59  --HP-FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKF---SEEQVKFWICEIVLA 112

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSP 282
           L +L S    IIH D+KP+NILL   ++  + I DF  +  V           +  Y +P
Sbjct: 113 LEYLHSK--GIIHRDIKPDNILL--DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAP 168

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK 316
           EVL    Y +A+D WSLG    E   G+  + G 
Sbjct: 169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGH 202

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 77.7 bits (191), Expect = 8e-16
 Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 18/218 (8%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           ++GKGSFG+V+ A    E+   A+K+++ K     + +  +     +   ++   ++V L
Sbjct: 2   VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 61

Query: 177 KGHFTWKNHLCLVFELLSYN----LYNLIRNTNFHGVSLNLTKKF-AQQLCCALAFLSSP 231
             HF+++    L F L   N     Y+L R   F    L    +F A ++  AL +L S 
Sbjct: 62  --HFSFQTADKLYFVLDYINGGELFYHLQRERCF----LEPRARFYAAEIASALGYLHS- 114

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGI 288
            L+I++ DLKPENILL S  +  I + DFG    +     T   +  +  Y +PEVL   
Sbjct: 115 -LNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQ 171

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           PYD  +D W LG +L E+  G P F  +N  +    I+
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 209

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 76.8 bits (189), Expect = 8e-16
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 15/209 (7%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LGKG FG+V            A K + NKK    +   E  ++EK   A +HSR+IV L 
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKL-NKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLA 59

Query: 178 GHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
             F  K  LCLV  +     L Y++YN+  +    G        +  Q+   L  L   +
Sbjct: 60  YAFQTKTDLCLVMTIMNGGDLRYHIYNV--DEENPGFPEPRACFYTAQIISGLEHLH--Q 115

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQ-YIQSRYYRSPEVLLGIP 289
             II+ DLKPEN+LL       ++I D G +  +  GQ+  + Y  +  + +PE+L G  
Sbjct: 116 RRIIYRDLKPENVLL--DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE 173

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           YD ++D ++LG  L E+      F  + E
Sbjct: 174 YDFSVDYFALGVTLYEMIAARGPFRARGE 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 76.2 bits (187), Expect = 1e-15
 Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 23/263 (8%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ---AQIEVQLLEKINKAD 167
           RYEI   +G+GSFG++  A    +     IK I   K  + +   ++ EV LL K+   +
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNF-HGVSLNLTKKFAQQLCCALA 226
           I     V     F     L +V E       +L++  N   GV  +  +  +  +  +L 
Sbjct: 61  I-----VTFFASFQENGRLFIVMEYCDGG--DLMKRINRQRGVLFSEDQILSWFVQISLG 113

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYIQSRYYRSPE 283
                +  I+H D+K +NI L      A K+ DFG +  +  ++   Y  + + YY SPE
Sbjct: 114 LKHIHDRKILHRDIKSQNIFLSKNGMVA-KLGDFGIARQLNDSMELAYTCVGTPYYLSPE 172

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP--PGYLLHGAS 341
           +    PY+   D+WSLGC+L EL T +  F G N    + KI +    P  P +     S
Sbjct: 173 ICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRS 232

Query: 342 KTSKYF-----DRLSDNSYVLKK 359
             S+ F     DR S  S +LK+
Sbjct: 233 LISQLFKVSPRDRPSITS-ILKR 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 77.2 bits (190), Expect = 1e-15
 Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 28/230 (12%)

Query: 117 LLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQ-----LLEKINKADI 168
           +LG+GSFG+V  V+     +  Q+ A+K++K       +A ++V+      +E+   A++
Sbjct: 3   VLGQGSFGKVFLVRKITGPDAGQLYAMKVLK-------KATLKVRDRVRTKMERDILAEV 55

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  +IVKL   F  +  L L+ + L   +L+  L +   F   +    K +  +L  AL 
Sbjct: 56  NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TEEDVKFYLAELALALD 112

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPE 283
            L S  L II+ DLKPENILL   +   IK+ DFG    S    +  Y +  +  Y +PE
Sbjct: 113 HLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 168

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMP 332
           V+    +  + D WS G ++ E+ TG   F GK+  + MT I++  LGMP
Sbjct: 169 VVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP 218

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 21/228 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           ++GKGSFG+V+ A    +    A+K+++ K     + Q  +     +   ++   ++V L
Sbjct: 2   VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61

Query: 177 KGHFTWKNHLCLVFELLSYN----LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
             H++++    L F L   N     ++L R   F        + +A ++  A+ +L S  
Sbjct: 62  --HYSFQTAEKLYFVLDYVNGGELFFHLQRERCF---LEPRARFYAAEVASAIGYLHS-- 114

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----QTLYQYIQSRYYRSPEVLLGI 288
           L+II+ DLKPENILL S  +  + + DFG  C  G    +T   +  +  Y +PEVL   
Sbjct: 115 LNIIYRDLKPENILLDS--QGHVVLTDFGL-CKEGVEPEETTSTFCGTPEYLAPEVLRKE 171

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII--EVLGMPPG 334
           PYD  +D W LG +L E+  G P F  + +V QM   I  + L +P G
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSR-DVSQMYDNILHKPLQLPGG 218

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 18/221 (8%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD +     +G+GS G V  A D     QVA+K +  +K    Q + E+   E +   D 
Sbjct: 21  LDNF---VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK----QQRRELLFNEVVIMRDY 73

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
               IV++   +   + L +V E L    L +++ +T  +   +         +  AL+F
Sbjct: 74  QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---ATVCLAVLKALSF 130

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEV 284
           L +    +IH D+K ++ILL S  R  +K+ DFG    V + + +    + + Y+ +PEV
Sbjct: 131 LHAQ--GVIHRDIKSDSILLTSDGR--VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEV 186

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           +  +PY   +D+WSLG +++E+  GEP +  +  +  M +I
Sbjct: 187 ISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 76.2 bits (188), Expect = 2e-15
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 20/228 (8%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRYIV 174
            +G+G+FG V K         +A+K I++      Q ++  ++ ++ + +       YIV
Sbjct: 11  EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCP----YIV 66

Query: 175 KLKGHFTWKNHLCLVFELLSY---NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           K  G    +    +  EL+       Y  +       +   +  K A     AL +L   
Sbjct: 67  KFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE- 125

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPEVLL--- 286
           EL IIH D+KP NILL   +   IK+ DFG S  +  ++ +   +  R Y +PE +    
Sbjct: 126 ELKIIHRDVKPSNILL--DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 183

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPP 333
              YD+  D+WSLG  L E+ TG+  +   N V DQ+T++  V G PP
Sbjct: 184 RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV--VKGDPP 229

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 75.8 bits (186), Expect = 4e-15
 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 11/222 (4%)

Query: 118 LGKGSFGQVVKA-FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG GSFG+V+ A + +E+   VAIK  +  K  + Q Q++    E+     I+  + V L
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSK-IIKQKQVDHVFSERKILNYINHPFCVNL 96

Query: 177 KGHFTWKNHLCLVFELLSYNLYN--LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
            G F  +++L LV E +    +   L RN  F     ++   +A Q+     +L S  L+
Sbjct: 97  YGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPN---DVGCFYAAQIVLIFEYLQS--LN 151

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAI 294
           I++ DLKPEN+LL   K   IK+ DFG +  V    Y    +  Y +PE+LL + +  A 
Sbjct: 152 IVYRDLKPENLLL--DKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAA 209

Query: 295 DMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           D W+LG  + E+  G P F     +    KI+E +   P +L
Sbjct: 210 DWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFL 251

Length = 340

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 74.3 bits (182), Expect = 5e-15
 Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 31/256 (12%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINK 165
           + +  LLG+G+FG+V   +D +   ++A+K ++           +N  + E+QLL+ +  
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-- 61

Query: 166 ADIHSRYIVKLKGHF--TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLC 222
             +H R IV+  G      +  L +  E +   ++ + +++  +  ++ N+T+K+ +Q+ 
Sbjct: 62  --LHER-IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQIL 116

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------CHVGQTLYQYIQS 276
             +++L S    I+H D+K  NIL  S     +K+ DFG+S      C  G  +     +
Sbjct: 117 EGVSYLHSN--MIVHRDIKGANILRDSV--GNVKLGDFGASKRLQTICLSGTGMKSVTGT 172

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP--PG 334
            Y+ SPEV+ G  Y    D+WS+GC +VE+ T +P ++   E + M  I ++   P  P 
Sbjct: 173 PYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA---EFEAMAAIFKIATQPTNPV 229

Query: 335 YLLHGASKTSKYFDRL 350
              H +     +  R+
Sbjct: 230 LPPHVSDHCRDFLKRI 245

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 25/238 (10%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK----INKADIHSRYI 173
           +GKGSFG+V K  D+  +  VAIKII      L +A+ E++ +++    +++ D  S Y+
Sbjct: 12  IGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--SPYV 64

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            K  G +     L ++ E L   +  +L+R   F    +    K   ++   L +L S +
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEK 121

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIP 289
              IH D+K  N+LL   ++  +K+ DFG +  +  T  +   ++ + ++ +PEV+    
Sbjct: 122 K--IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 177

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF 347
           YD   D+WSLG   +EL  GEP     +++  M  +  +    P  L    SK  K F
Sbjct: 178 YDSKADIWSLGITAIELAKGEP---PNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEF 232

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 74.1 bits (182), Expect = 7e-15
 Identities = 52/232 (22%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-----ADIHSR 171
            LG G+F    +A D +    +A+K +   +   N +  + +++E + K     A ++  
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVR---NTSSEQEEVVEALRKEIRLMARLNHP 63

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +I+++ G     +H  L  E ++    + + +  +      +   + +QL   L++L   
Sbjct: 64  HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS-KYGAFKEAVIINYTEQLLRGLSYLH-- 120

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-------QYIQSRYYRSPEV 284
           E  IIH D+K  N+L+ S  +  ++I DFG++  +            Q + +  + +PEV
Sbjct: 121 ENQIIHRDVKGANLLIDSTGQR-LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT---KIIEVLGMPP 333
           L G  Y  + D+WS+GC+++E+ T +P ++ +   + +    KI      P 
Sbjct: 180 LRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPS 231

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 74.1 bits (182), Expect = 8e-15
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG G+ G V K         +A K+  I  K     Q   E+Q++      +  S YIV 
Sbjct: 13  LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMH-----ECRSPYIVS 67

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             G F  +N++C+  E +     + I       + + +  K A  +   L +L +    I
Sbjct: 68  FYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYN-VHRI 125

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLLGIPYDLAI 294
           +H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +  Y SPE + G  Y +  
Sbjct: 126 MHRDIKPSNILVNS--RGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKS 183

Query: 295 DMWSLGCILVELHTGEPLFSGKNEVD 320
           D+WSLG  ++EL  G+  F+  N  D
Sbjct: 184 DVWSLGISIIELALGKFPFAFSNIDD 209

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 73.5 bits (181), Expect = 9e-15
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKAD 167
           D YE+  ++G G+   V  A       +VAIK I  +K    +++ + EVQ + + N  +
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV-SLNLTKKFAQQLCCAL 225
           +     VK    F   + L LV   LS  +L ++++++   G     +     +++   L
Sbjct: 61  V-----VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGL 115

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-------CHVGQTLYQYIQSRY 278
            +L S     IH D+K  NILL      ++KI DFG S           +    ++ +  
Sbjct: 116 EYLHSNGQ--IHRDIKAGNILLGEDG--SVKIADFGVSASLADGGDRTRKVRKTFVGTPC 171

Query: 279 YRSPEVL-LGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           + +PEV+     YD   D+WS G   +EL TG   +S
Sbjct: 172 WMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           ++GKGSFG+V+ A    +    A+K+++ K     + Q  +     +   ++   ++V L
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61

Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
              F     L  V + ++     ++L R  +F        + +A ++  AL +L S  ++
Sbjct: 62  HYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPR---ARFYAAEIASALGYLHS--IN 116

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           I++ DLKPENILL S  +  + + DFG          T   +  +  Y +PEV+   PYD
Sbjct: 117 IVYRDLKPENILLDS--QGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYD 174

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII-EVLGMPPG 334
             +D W LG +L E+  G P F  ++  +    I+ + L + PG
Sbjct: 175 NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPG 218

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 14/208 (6%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V+ A         AIK +K K   L    +E  ++E+  +  A  H  ++ 
Sbjct: 2   VLGKGSFGKVMLAELKGTNEFFAIKALK-KDVVLEDDDVECTMVERRVLALAWEHP-FLT 59

Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L   F  K HL  V E L+  +L   I+++          + +A ++ C L FL     
Sbjct: 60  HLFCTFQTKEHLFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK-- 115

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPY 290
            II+ DLK +N+LL   K   IKI DFG    + +       +  +  Y +PE+L G  Y
Sbjct: 116 GIIYRDLKLDNVLL--DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKY 173

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNE 318
           + ++D WS G +L E+  G+  F G++E
Sbjct: 174 NESVDWWSFGVLLYEMLIGQSPFHGEDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 22/222 (9%)

Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR--YI 173
            +LGKGSFG+V+ A         AIKI+K K   +    +E  ++EK   A +  +  ++
Sbjct: 6   MVLGKGSFGKVMLAERKGTDELYAIKILK-KDVIIQDDDVECTMVEKRVLA-LPGKPPFL 63

Query: 174 VKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            +L   F   + L  V E      L Y++  + +    H V       +A ++   L FL
Sbjct: 64  TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVF------YAAEIAIGLFFL 117

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVL 285
            S    II+ DLK +N++L +     IKI DFG    +   G+T   +  +  Y +PE++
Sbjct: 118 HSK--GIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEII 173

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
              PY  ++D W+ G +L E+  G+P F G++E +    I+E
Sbjct: 174 AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 73.6 bits (180), Expect = 2e-14
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E     +    ++  L
Sbjct: 2   LLGKGTFGKVILVREKASGKYYAMKILK-KEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F  K+ LC V E ++     ++L R   F   S + T+ +  ++  AL +L S +  
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELFFHLSRERVF---SEDRTRFYGAEIVSALDYLHSGK-- 115

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----QTLYQYIQSRYYRSPEVLLGIPY 290
           I++ DLK EN++L   K   IKI DFG  C  G     T+  +  +  Y +PEVL    Y
Sbjct: 116 IVYRDLKLENLML--DKDGHIKITDFGL-CKEGITDAATMKTFCGTPEYLAPEVLEDNDY 172

Query: 291 DLAIDMWSLGCILVELHTGE-PLFSGKNE 318
             A+D W LG ++ E+  G  P ++  +E
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHE 201

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 72.8 bits (178), Expect = 2e-14
 Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 27/225 (12%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A +     QVA+K +  +K    Q + E+   E +   D H   +V + 
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHENVVDMY 85

Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFH-----GVSLNLTKKFAQQLCCALAFLSSP 231
             +   + L +V E L    L +++ +T  +      V L++ +        AL++L + 
Sbjct: 86  NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR--------ALSYLHNQ 137

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGI 288
              +IH D+K ++ILL S  R  IK+ DFG    V + + +    + + Y+ +PEV+  +
Sbjct: 138 --GVIHRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRL 193

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           PY   +D+WSLG +++E+  GEP +  +  +  M +I + L  PP
Sbjct: 194 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL--PP 236

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 14/208 (6%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V  A         AIK +K K   L    +E  ++EK  ++ A  H  ++ 
Sbjct: 2   MLGKGSFGKVFLAELKGTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLAWEHP-FLT 59

Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L   F  K +L  V E L+  +L   I++   H   L     +A ++ C L FL S   
Sbjct: 60  HLYCTFQTKENLFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK-- 115

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQT-LYQYIQSRYYRSPEVLLGIPY 290
            I++ DLK +NILL       IKI DFG      +G      +  +  Y +PE+LLG  Y
Sbjct: 116 GIVYRDLKLDNILL--DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKY 173

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNE 318
           + ++D WS G +L E+  G+  F G +E
Sbjct: 174 NTSVDWWSFGVLLYEMLIGQSPFHGHDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 73.0 bits (179), Expect = 3e-14
 Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 16/217 (7%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V+ A         AIK++K K   L    ++  + EK  +  A  H  ++ 
Sbjct: 2   VLGKGSFGKVMLAELKGTDEVYAIKVLK-KDVILQDDDVDCTMTEKRILALAAKHP-FLT 59

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            L   F  K+ L  V E ++    ++ + R+  F       ++ +A ++  AL FL    
Sbjct: 60  ALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDE---PRSRFYAAEVTLALMFLHRH- 115

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIP 289
             +I+ DLK +NILL +      K+ DFG        G T   +  +  Y +PE+L  + 
Sbjct: 116 -GVIYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELE 172

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           Y  ++D W+LG ++ E+  G+P F   NE D    I+
Sbjct: 173 YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL 209

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 72.9 bits (179), Expect = 4e-14
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L  +E+   LG GSFG+V  A         AIK +K K+  L   Q++    EK    ++
Sbjct: 17  LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLK-KREILKMKQVQHVAQEKSILMEL 75

Query: 169 HSRYIVKLKGHFTWKNHLCLVFE-LLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA--- 224
              +IV +   F  +N +  + E ++   L+  +R     G   N   KF      A   
Sbjct: 76  SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA---GRFPNDVAKFY----HAELV 128

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
           LAF       II+ DLKPEN+LL    +  +K+ DFG +  V    +    +  Y +PEV
Sbjct: 129 LAFEYLHSKDIIYRDLKPENLLL--DNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEV 186

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +    +  A+D W++G +L E   G P F          KI+ 
Sbjct: 187 IQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA 229

Length = 329

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 71.7 bits (175), Expect = 5e-14
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 23/215 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +E+  L+G G++GQV K    +     AIK++        + + E+ +L+K +    H R
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHR 63

Query: 172 YIVKLKGHFTWKN------HLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            I    G F  KN       L LV E   + ++ +LI+NT  + +         +++   
Sbjct: 64  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 123

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
           L+ L   +  +IH D+K +N+LL   + + +K++DFG S  + +T+ +   +I + Y+ +
Sbjct: 124 LSHLH--QHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 179

Query: 282 PEVLL-----GIPYDLAIDMWSLGCILVELHTGEP 311
           PEV+         YD   D+WSLG   +E+  G P
Sbjct: 180 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 73.0 bits (179), Expect = 5e-14
 Identities = 82/339 (24%), Positives = 141/339 (41%), Gaps = 58/339 (17%)

Query: 111 RYEIDTLLGKGSFGQV---VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           +Y I + L  GS G+V    K  D + K  +   +   K P       E+ +L+ I+   
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTP-----GREIDILKTISH-- 145

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              R I+ L   + WK+ +C+V      +L+  +  +    + L       ++L  ALA+
Sbjct: 146 ---RAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAY 200

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSP 282
           L      IIH D+K ENI L  P+ + +   DFG++C +         Y +  +    SP
Sbjct: 201 LH--GRGIIHRDVKTENIFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTLETNSP 256

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVD--QMTKIIEVLGMPPG-YLLH 338
           E+L   PY    D+WS G +L E+      LF  + +    Q+  II  + + P  +  +
Sbjct: 257 ELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
           G++   K+F +     Y +         R P +             P   R+        
Sbjct: 317 GSTNLCKHFKQ-----YAIVL-------RPPYTI------------PPVIRKYGM----- 347

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
            +M  + LI +MLT+D + R S  ++L    F K  ++ 
Sbjct: 348 -HMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINL 385

Length = 392

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 38/221 (17%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKAD 167
            + YE+   +G G++G V KA D      VAIK+IK          Q E+ +L++    +
Sbjct: 2   QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPN 61

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-------NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                IV   G +  ++ L +V E   Y       ++Y + R          L++     
Sbjct: 62  -----IVAYFGSYLRRDKLWIVME---YCGGGSLQDIYQVTRGP--------LSELQIAY 105

Query: 221 LCC----ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---Y 273
           +C      LA+L   E   IH D+K  NILL       +K+ DFG S  +  T+ +   +
Sbjct: 106 VCRETLKGLAYLH--ETGKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAKRKSF 161

Query: 274 IQSRYYRSPEVL---LGIPYDLAIDMWSLGCILVELHTGEP 311
           I + Y+ +PEV        YD   D+W+LG   +EL   +P
Sbjct: 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 71.6 bits (175), Expect = 6e-14
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 40/214 (18%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK----INKADIHSRYI 173
           +GKGSFG+V K  D+  K  VAIKII      L +A+ E++ +++    +++ D  S YI
Sbjct: 12  IGKGSFGEVYKGIDNRTKEVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--SPYI 64

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK----------KFAQQLCC 223
            +  G +     L ++ E L              G +L+L K             +++  
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLG------------GGSALDLLKPGPLEETYIATILREILK 112

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYR 280
            L +L S     IH D+K  N+LL   ++  +K+ DFG +  +  T  +   ++ + ++ 
Sbjct: 113 GLDYLHSERK--IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           +PEV+    YD   D+WSLG   +EL  GEP  S
Sbjct: 169 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 202

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 72.0 bits (177), Expect = 7e-14
 Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-----INKADIHSRY 172
           LG+G FG+V+ A   +     AIK +K K   + + ++E  + EK      N    H  +
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALK-KGDIIARDEVESLMCEKRIFETANSER-HP-F 63

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +V L   F  ++H+C V E  +  +L   I    F   S      +A  +   L +L   
Sbjct: 64  LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVF---SEPRAVFYAACVVLGLQYLH-- 118

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH----VGQTLYQYIQSRYYRSPEVLLG 287
           E  I++ DLK +N+LL +     +KI DFG  C      G     +  +  + +PEVL  
Sbjct: 119 ENKIVYRDLKLDNLLLDT--EGFVKIADFGL-CKEGMGFGDRTSTFCGTPEFLAPEVLTE 175

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
             Y  A+D W LG ++ E+  GE  F G +E
Sbjct: 176 TSYTRAVDWWGLGVLIYEMLVGESPFPGDDE 206

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 70.7 bits (173), Expect = 9e-14
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 14/213 (6%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKAD 167
           +YE   ++G+G+FG V       ++  V IK I  +   K     AQ E Q+L+ ++  +
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I   Y      +F     L +V E      L   I+      +  +    F  Q+  AL 
Sbjct: 61  IIEYY-----ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRYYRSPEV 284
            + +    I+H DLK +NILL    +  +KI DFG S  +      Y  + +  Y SPE+
Sbjct: 116 HVHTKL--ILHRDLKTQNILL-DKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPEL 172

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
             G PY+   D+W+LGC+L EL + +  F   N
Sbjct: 173 CEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 71.5 bits (175), Expect = 9e-14
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
           +LGKGSFG+V+ A    +    A+K +K K   L    +E  ++EK +      + ++  
Sbjct: 2   VLGKGSFGKVLLAELKGKGEYFAVKALK-KDVVLIDDDVECTMVEKRVLALAWENPFLTH 60

Query: 176 LKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           L   F  K HL  V E L+    ++++     F    L     +A ++ C L FL S   
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRF---DLYRATFYAAEIVCGLQFLHSK-- 115

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCH---VGQT-LYQYIQSRYYRSPEVLLGIP 289
            II+ DLK +N++L   +   IKI DFG  C     G      +  +  Y +PE+L G+ 
Sbjct: 116 GIIYRDLKLDNVML--DRDGHIKIADFGM-CKENVFGDNRASTFCGTPDYIAPEILQGLK 172

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           Y  ++D WS G +L E+  G+  F G +E D++ + I V
Sbjct: 173 YTFSVDWWSFGVLLYEMLIGQSPFHGDDE-DELFESIRV 210

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 29/213 (13%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKI 163
           L  ++I+  +GKG F  V KA    +   VA+K ++     + K   +  + E+ LL+++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK-EIDLLKQL 59

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQ 220
           +  ++     +K    F   N L +V EL    +L  +I++       +      K+  Q
Sbjct: 60  DHPNV-----IKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQ 114

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTL--YQY 273
           LC AL  + S    I+H D+KP N+ + +     +K+ D G     SS    +T   +  
Sbjct: 115 LCSALEHMHSKR--IMHRDIKPANVFITA--TGVVKLGDLGLGRFFSS----KTTAAHSL 166

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
           + + YY SPE +    Y+   D+WSLGC+L E+
Sbjct: 167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 18/235 (7%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQ------IEVQLLE-KI 163
           Y +   LG G+FG V K          +A+K I    P   + +      I   + E  I
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS----YNLYNLIRNTNFHGVSLNLTKKFAQ 219
            K  +    IV+    F   + L +V +L+        +N ++          +   F  
Sbjct: 62  IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV- 120

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSR 277
           Q+  AL +L   E  I+H DL P NI+L    +  + I DFG +        L   + + 
Sbjct: 121 QMVLALRYLHK-EKRIVHRDLTPNNIMLGEDDK--VTITDFGLAKQKQPESKLTSVVGTI 177

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
            Y  PE++   PY    D+W+ GCIL ++ T +P F   N +   TKI+E +  P
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP 232

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 69.9 bits (171), Expect = 2e-13
 Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 32/231 (13%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKII----------KNKKPFLNQAQIEVQLLEKINKA 166
           L+G GSFG V    +      +A+K +            K+  L+    E+ LL+     
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLK----- 61

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           ++    IV+  G     +HL +  E +       + N N+      L + F +Q+   L 
Sbjct: 62  ELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLN-NYGAFEETLVRNFVRQILKGLN 120

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY---------QYIQSR 277
           +L +    IIH D+K  NIL+    +  IKI DFG S  +                  S 
Sbjct: 121 YLHNRG--IIHRDIKGANILV--DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSV 176

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           ++ +PEV+    Y    D+WSLGC++VE+ TG+  F    +  Q+  I ++
Sbjct: 177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFP---DCTQLQAIFKI 224

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG+G+ G V K          A+K I        Q QI  +L  +INK    S YIVK  
Sbjct: 9   LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILREL--EINK-SCKSPYIVKYY 65

Query: 178 GHFTWKNHLCLVFELLSY-------NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           G F        +   + Y       ++Y  ++      +   +  K A+ +   L++L S
Sbjct: 66  GAFL-DESSSSIGIAMEYCEGGSLDSIYKKVKKRGGR-IGEKVLGKIAESVLKGLSYLHS 123

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVLLGIP 289
            +  IIH D+KP NILL   ++  +K+ DFG S  +  +L   +  + +Y +PE + G P
Sbjct: 124 RK--IIHRDIKPSNILLT--RKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKP 179

Query: 290 YDLAIDMWSLGCILVEL 306
           Y +  D+WSLG  L+E+
Sbjct: 180 YSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 33/238 (13%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----------LNQAQIEVQLLE 161
           + +  LLG+G+FG+V   +D +   ++A+K +    PF          +N  + E+QLL 
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQV----PFDPDSQETSKEVNALECEIQLL- 58

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
           K  + D   +Y   L+     K  L +  E +   ++ + ++   +  ++ N+T+++ +Q
Sbjct: 59  KNLRHDRIVQYYGCLRDPEEKK--LSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQ 114

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------CHVGQTLYQYI 274
           +   +++L S    I+H D+K  NIL  S     +K+ DFG+S      C  G  +    
Sbjct: 115 ILQGVSYLHSN--MIVHRDIKGANILRDSA--GNVKLGDFGASKRIQTICMSGTGIKSVT 170

Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
            + Y+ SPEV+ G  Y    D+WS+ C +VE+ T +P ++   E + M  I ++   P
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA---EYEAMAAIFKIATQP 225

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 27/230 (11%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHS 170
           LLG+G+FG+V   +D +   ++A K ++           ++  + E+QLL+ +     H 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ----HE 64

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFL 228
           R IV+  G    +    L    + Y     +++    +  ++ ++T+K+ +Q+   +++L
Sbjct: 65  R-IVQYYGCLRDRAEKTLTI-FMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYL 122

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------CHVGQTLYQYIQSRYYRSP 282
            S    I+H D+K  NIL  S     +K+ DFG+S      C  G  +     + Y+ SP
Sbjct: 123 HSN--MIVHRDIKGANILRDSA--GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSP 178

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           EV+ G  Y    D+WSLGC +VE+ T +P ++   E + M  I ++   P
Sbjct: 179 EVISGEGYGRKADVWSLGCTVVEMLTEKPPWA---EYEAMAAIFKIATQP 225

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 55/274 (20%)

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           I++LKG FT+    CL+      +LY  +        ++ +    A +     A     E
Sbjct: 145 IIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHE 200

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY--------RSPEV 284
             IIH D+K ENI +  P    + + DFG++C           ++YY         +PE+
Sbjct: 201 NRIIHRDIKAENIFINHP--GDVCLGDFGAACFP----VDINANKYYGWAGTIATNAPEL 254

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-------QMTKIIEVLGMPPG-YL 336
           L   PY  A+D+WS G +L E+ T       K+ +D       Q+  II   G  P  + 
Sbjct: 255 LARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314

Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
           +   +   + +  L+            +  R PGS+ L T L                + 
Sbjct: 315 IDAQANLDEIYIGLAK-----------KSSRKPGSRPLWTNL----------------YE 347

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           L   +++  LI +ML +D   R S   +L    F
Sbjct: 348 LPIDLEY--LICKMLAFDAHHRPSAEALLDFAAF 379

Length = 391

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 69.3 bits (169), Expect = 4e-13
 Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 23/215 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +E+  ++G G++GQV K    +     AIK++   +    + ++E+ +L+K +    H R
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS----HHR 73

Query: 172 YIVKLKGHFTWK------NHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            I    G F  K      + L LV E   + ++ +L++NT  + +  +      +++   
Sbjct: 74  NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG 133

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
           LA L + +  +IH D+K +N+LL   + + +K++DFG S  + +T+ +   +I + Y+ +
Sbjct: 134 LAHLHAHK--VIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 189

Query: 282 PEVLL-----GIPYDLAIDMWSLGCILVELHTGEP 311
           PEV+         YD   D+WSLG   +E+  G P
Sbjct: 190 PEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 224

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 69.7 bits (170), Expect = 4e-13
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 22/223 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR--YIV 174
           LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   +SR  ++ 
Sbjct: 2   LLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQNSRHPFLT 58

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            LK  F   + LC V E  +     ++L R   F   S +  + +  ++  AL +L S E
Sbjct: 59  ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALDYLHS-E 114

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIP 289
            ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    
Sbjct: 115 KNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 172

Query: 290 YDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGM 331
           Y  A+D W LG ++ E+  G  P ++  +E     K+ E++ M
Sbjct: 173 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILM 210

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 68.3 bits (167), Expect = 5e-13
 Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 22/226 (9%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK---IIKNKKPFLNQAQIEVQLLEKINKAD 167
           +Y     +G+GSFG+ +     E+  Q  IK   I K       +++ EV +L  +   +
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN 60

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I     V+ +  F    +L +V +     +LY  I          +    +  Q+C AL 
Sbjct: 61  I-----VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQSRYYR 280
            +   +  I+H D+K +NI L   K   IK+ DFG      S+  + +T    I + YY 
Sbjct: 116 HVH--DRKILHRDIKSQNIFLT--KDGTIKLGDFGIARVLNSTVELARTC---IGTPYYL 168

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           SPE+    PY+   D+W+LGC+L E+ T +  F   N  + + KII
Sbjct: 169 SPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII 214

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 69.3 bits (169), Expect = 5e-13
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 14/218 (6%)

Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-YIV 174
            +LGKGSFG+V+ A         AIKI+K K   +    +E  ++EK   A      ++ 
Sbjct: 6   MVLGKGSFGKVMLAERKGTDELYAIKILK-KDVVIQDDDVECTMVEKRVLALQDKPPFLT 64

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           +L   F   + L  V E ++    +Y++ +   F          +A ++   L FL    
Sbjct: 65  QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISVGLFFLH--R 119

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIP 289
             II+ DLK +N++L S     IKI DFG        G T   +  +  Y +PE++   P
Sbjct: 120 RGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP 177

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Y  ++D W+ G +L E+  G+P F G++E +    I+E
Sbjct: 178 YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 69.0 bits (169), Expect = 6e-13
 Identities = 66/218 (30%), Positives = 93/218 (42%), Gaps = 42/218 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKAD 167
           D +E    LG G+ G V K         +A K+I    K    NQ   E+++L + N   
Sbjct: 1   DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN--- 57

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL------ 221
             S YIV   G F     + +  E             +  G SL+   K A ++      
Sbjct: 58  --SPYIVGFYGAFYSDGEISICME-------------HMDGGSLDQVLKKAGRIPENILG 102

Query: 222 ------CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL----Y 271
                    L +L   +  I+H D+KP NIL+ S  R  IK+ DFG S   GQ +     
Sbjct: 103 KISIAVLRGLTYLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVS---GQLIDSMAN 156

Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
            ++ +R Y SPE L G  Y +  D+WSLG  LVE+  G
Sbjct: 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG 194

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 69.3 bits (169), Expect = 6e-13
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 20/220 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
           +LGKGSFG+V+ A         AIKI+K K   +    +E  ++EK +        ++ +
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILK-KDVVIQDDDVECTMVEKRVLALSGKPPFLTQ 65

Query: 176 LKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           L   F   + L  V E      L Y +  + R    H V       +A ++   L FL S
Sbjct: 66  LHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVF------YAAEIAIGLFFLHS 119

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
               II+ DLK +N++L S     IKI DFG    +   G T   +  +  Y +PE++  
Sbjct: 120 K--GIIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY 175

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            PY  ++D W+ G +L E+  G+  F G++E +    I+E
Sbjct: 176 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 68.0 bits (166), Expect = 1e-12
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 19/196 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G+ G V KA+    +  +A+K+I        Q QI +  LE + K D  S YI+   
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQI-MSELEILYKCD--SPYIIGFY 65

Query: 178 GHFTWKNHLCLVFELL---SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           G F  +N + +  E +   S ++Y  I       +++ + K         L +L S  L 
Sbjct: 66  GAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVK--------GLTYLWS--LK 115

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCH-VGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           I+H D+KP N+L+ +  R  +K+ DFG S   V      Y+ +  Y +PE + G  Y + 
Sbjct: 116 ILHRDVKPSNMLVNT--RGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIH 173

Query: 294 IDMWSLGCILVELHTG 309
            D+WSLG   +EL  G
Sbjct: 174 SDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 69.8 bits (170), Expect = 1e-12
 Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 34/267 (12%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQV--VKAFDHEEK-CQVAIKIIKNKKPFLNQAQIEVQLLE 161
           GE  L+ YE+   +G G FG+V  VK    +E  C  AI     K+   +Q  IEV ++ 
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMR 67

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVF---ELLSYNL---YNLIRNTNFHGVSLNLTK 215
           ++   +I  RYI +       K ++ + F     LS N+   Y +      H + +++T+
Sbjct: 68  ELKHKNI-VRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAI-VDITR 125

Query: 216 KFAQQLCCALAFLSSPE-LSIIHCDLKPENILLCS---------------PKRSAIKIID 259
           +    L         P    ++H DLKP+NI L +                 R   KI D
Sbjct: 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGD 185

Query: 260 FGSSCHVG--QTLYQYIQSRYYRSPEVLL--GIPYDLAIDMWSLGCILVELHTGEPLFSG 315
           FG S ++G     +  + + YY SPE+LL     YD   DMW+LGCI+ EL +G+  F  
Sbjct: 186 FGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245

Query: 316 KNEVDQMTKIIEVLGMPPGYLLHGASK 342
            N   Q+   I  L   P   + G SK
Sbjct: 246 ANNFSQL---ISELKRGPDLPIKGKSK 269

Length = 1021

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 67.3 bits (164), Expect = 1e-12
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 15/204 (7%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN--QAQIEVQLLEKINKADI 168
           +Y +  ++G+GSFG+ +         + A+K I+  K       ++ E  LL K+   +I
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI 60

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                V  K  F    HL +V E     +L   I+         +   ++  Q+C  +  
Sbjct: 61  -----VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQH 115

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEV 284
           +   E  ++H D+K +NI L   +   +K+ DFGS+      G     Y+ + YY  PE+
Sbjct: 116 IH--EKRVLHRDIKSKNIFLT--QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEI 171

Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
              +PY+   D+WSLGCIL EL T
Sbjct: 172 WENMPYNNKSDIWSLGCILYELCT 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK----INKADIHSRYI 173
           +GKGSFG+V K  D+  +  VAIKII      L +A+ E++ +++    +++ D  S Y+
Sbjct: 12  IGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--SPYV 64

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK----------KFAQQLCC 223
            K  G +     L ++ E L              G +L+L +             +++  
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLG------------GGSALDLLEPGPLDETQIATILREILK 112

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYR 280
            L +L S +   IH D+K  N+LL   +   +K+ DFG +  +  T  +   ++ + ++ 
Sbjct: 113 GLDYLHSEKK--IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
           +PEV+    YD   D+WSLG   +EL  GEP
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGEP 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 67.6 bits (165), Expect = 2e-12
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 16/238 (6%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V+ A   E     A+K++K K   L    +E  + EK  ++ A  H  ++ 
Sbjct: 2   VLGKGSFGKVMLARLKESGRLYAVKVLK-KDVILQDDDVECTMTEKRILSLARNHP-FLT 59

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           +L   F   + L  V E ++    ++++ ++  F          +A ++  AL FL    
Sbjct: 60  QLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF---YAAEITSALMFLHDK- 115

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIP 289
             II+ DLK +N+LL        K+ DFG        G+T   +  +  Y +PE+L  + 
Sbjct: 116 -GIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML 172

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF 347
           Y  ++D W++G +L E+  G   F  +NE D    I+    + P +L   A    K F
Sbjct: 173 YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAF 230

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 66.5 bits (162), Expect = 2e-12
 Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 29/233 (12%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ---AQIEVQLLEKINKADIHSRYIV 174
           +GKGS+G+V       +  Q  IK +  +     +   A+ E QLL ++   +I      
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI------ 61

Query: 175 KLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            +    +W+    L++ ++ +    +LY+ ++      +  N   ++  Q+  AL +L  
Sbjct: 62  -VAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH- 119

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQSRYYRSPEV 284
            E  I+H DLK +N+ L   + + IK+ D G      + C +  TL   I + YY SPE+
Sbjct: 120 -EKHILHRDLKTQNVFLT--RTNIIKVGDLGIARVLENQCDMASTL---IGTPYYMSPEL 173

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE--VLGMPPGY 335
               PY+   D+W+LGC + E+ T +  F+ K+    + +IIE  +  MP  Y
Sbjct: 174 FSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDY 226

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 66.4 bits (162), Expect = 4e-12
 Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 14/209 (6%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E     +    ++  L
Sbjct: 2   LLGKGTFGKVILVREKATGKYYAMKILK-KEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60

Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   S +  + +  ++  AL +L S +  
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALGYLHSCD-- 115

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 116 VVYRDLKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 173

Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNEV 319
            A+D W LG ++ E+  G  P ++  +E 
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK 202

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 65.8 bits (160), Expect = 6e-12
 Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 19/231 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A +     QVA+K++  +K    Q + E+   E +   D   + +V++ 
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMY 84

Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +     L ++ E L    L +++  T  +   +    +   Q   AL +L S    +I
Sbjct: 85  KSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQ---ALCYLHSQ--GVI 139

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    + + + +    + + Y+ +PEV+   PY   
Sbjct: 140 HRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTE 197

Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS 344
           +D+WSLG +++E+  GEP +   + V  M ++ +    PP   L  A K S
Sbjct: 198 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD--SPPPK--LKNAHKIS 244

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 42/241 (17%)

Query: 118 LGKGSFGQVVKA----FDHEEKCQVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
           LG+G FG+V              QVA+K + +     +++  + E+++L  +        
Sbjct: 12  LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-----DHE 66

Query: 172 YIVKLKG--HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALA 226
            IVK KG         L L+ E L   +L + ++    H   +NL +   F+ Q+C  + 
Sbjct: 67  NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ---RHRDQINLKRLLLFSSQICKGMD 123

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQS------RYY 279
           +L S     IH DL   NIL+ S     +KI DFG +  + +   Y Y++        +Y
Sbjct: 124 YLGSQRY--IHRDLAARNILVESEDL--VKISDFGLAKVLPEDKDYYYVKEPGESPIFWY 179

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHT---------GEPLFSGKNEVDQM--TKIIEV 328
            +PE L    +  A D+WS G  L EL T          E L        QM  T+++E+
Sbjct: 180 -APECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238

Query: 329 L 329
           L
Sbjct: 239 L 239

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 65.4 bits (159), Expect = 7e-12
 Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 50/233 (21%)

Query: 114 IDTLLGKGSFGQVVKAFDHEEK-----CQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
           +   LG+G FG+VVKA     K       VA+K++K      + +++     E  LL+++
Sbjct: 4   LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQV 60

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR-------------------- 202
           N       +++KL G  +    L L+ E   Y +L + +R                    
Sbjct: 61  NHP-----HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSY 115

Query: 203 --NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
             N +   +++     FA Q+   + +L+  E+ ++H DL   N+L+   ++  +KI DF
Sbjct: 116 LDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVHRDLAARNVLVAEGRK--MKISDF 171

Query: 261 GSSCHVGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           G S  V +      +S+      + + E L    Y    D+WS G +L E+ T
Sbjct: 172 GLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 65.6 bits (160), Expect = 7e-12
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 34/229 (14%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI- 168
           + +E   L+  G++G V      E + + A+K I NK+  + + QI+   +E+    DI 
Sbjct: 1   EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKI-NKQNLILRNQIQQVFVER----DIL 55

Query: 169 ---HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
               + ++V +   F  K HLC+V E +   +   L++N     + +++ + +  +   A
Sbjct: 56  TFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLA 113

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-------------CHVGQTLY 271
           L +L +    I+H DLKP+N+L+ S     IK+ DFG S              H+ +   
Sbjct: 114 LEYLHN--YGIVHRDLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTR 169

Query: 272 QYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
           +++  +      Y +PEV+L   Y   +D W++G IL E   G   F G
Sbjct: 170 EFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 218

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 65.1 bits (159), Expect = 7e-12
 Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG+G++G VV    H     + A+K I+       Q ++ + L   I+   +   Y V  
Sbjct: 9   LGRGAYG-VVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDL--DISMRSVDCPYTVTF 65

Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
            G    +  + +  E++  +L    +     G+++  ++  K A  +  AL +L S +LS
Sbjct: 66  YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS-KLS 124

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ--SRYYRSPEVLLG----I 288
           +IH D+KP N+L+   +   +K+ DFG S ++  ++ + I    + Y +PE +       
Sbjct: 125 VIHRDVKPSNVLI--NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 182

Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPP 333
            YD+  D+WSLG  ++EL TG  P  S K    Q+ +++E     P
Sbjct: 183 GYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSP 226

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 2   LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 115

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 116 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 173

Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 201

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 65.5 bits (159), Expect = 1e-11
 Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 14/204 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 5   DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN--- 61

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   LA
Sbjct: 62  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLA 117

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 118 YLREKH-QIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 174

Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVEL  G
Sbjct: 175 QGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 52/231 (22%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKI------IKNKKPFLNQAQIEVQ 158
           ++  +   LG+GSFG V +         E + +VAIK       ++ +  FLN+A +  +
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE 65

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR-------NTNFHGV- 209
                     +  ++V+L G  +      +V EL++  +L + +R       N    G  
Sbjct: 66  ---------FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPP 116

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT 269
           +L    + A ++   +A+L+      +H DL   N ++       +KI DFG    + + 
Sbjct: 117 TLQKFIQMAAEIADGMAYLA--AKKFVHRDLAARNCMVAE--DLTVKIGDFG----MTRD 168

Query: 270 LYQYIQSRYYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           +Y+   + YYR            +PE L    +    D+WS G +L E+ T
Sbjct: 169 IYE---TDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 27/233 (11%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQI--EVQLLEKINK 165
           L+  E    +G G+ GQV K    ++   V A+K ++         +I  ++ ++ K + 
Sbjct: 14  LNDLENLGEIGSGTCGQVYKM-RFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD 72

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                 YIVK  G+F   + + +  EL+S  L  L++      +  ++  K    +  AL
Sbjct: 73  ----CPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKAL 127

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YR 280
            +L   +  +IH D+KP NILL       +K+ DFG S   G+ +    ++R      Y 
Sbjct: 128 HYLKE-KHGVIHRDVKPSNILL--DASGNVKLCDFGIS---GRLVDSKAKTRSAGCAAYM 181

Query: 281 SPEVLLGIP-----YDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
           +PE  +  P     YD+  D+WSLG  LVEL TG+ P  + K E + +TKI++
Sbjct: 182 APE-RIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ 233

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 26/239 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ----IEVQLLEKIN 164
           L  ++I+  +G+G F +V +A    ++  VA+K ++  +    +A+     E+ LL+++N
Sbjct: 1   LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--NTNFHGVSLNLTKKFAQQL 221
             ++     +K    F   N L +V EL    +L  +I+        +      K+  QL
Sbjct: 61  HPNV-----IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQ 275
           C A+  + S    ++H D+KP N+ + +     +K+ D G      S      +L   + 
Sbjct: 116 CSAVEHMHSRR--VMHRDIKPANVFITAT--GVVKLGDLGLGRFFSSKTTAAHSL---VG 168

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
           + YY SPE +    Y+   D+WSLGC+L E+     P +  K  +  + + IE    PP
Sbjct: 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP 227

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 63.5 bits (154), Expect = 2e-11
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 26/239 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
           L  + I+  +G+G F +V +A    +   VA+K ++       +A+     E+ LL+++N
Sbjct: 1   LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 60

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHG--VSLNLTKKFAQQL 221
             ++     +K    F   N L +V EL  + +L  +I++       +      K+  QL
Sbjct: 61  HPNV-----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQL 115

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQYIQ 275
           C AL  + S    ++H D+KP N+ + +     +K+ D G      S      +L   + 
Sbjct: 116 CSALEHMHSRR--VMHRDIKPANVFITAT--GVVKLGDLGLGRFFSSKTTAAHSL---VG 168

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPP 333
           + YY SPE +    Y+   D+WSLGC+L E+   + P +  K  +  + K IE    PP
Sbjct: 169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP 227

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 5   DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN--- 61

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 62  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLT 117

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 118 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 174

Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 175 QGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 56/280 (20%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +E   ++G+G+FG+V      +     A+K ++ K   L + Q+     E+   A+  
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLR-KSEMLEKEQVAHVRAERDILAEAD 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + ++VKL   F  +N+L L+ E L     +  L++   F   +   T+ +  +    LA 
Sbjct: 60  NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTF---TEEETRFYIAE--TILAI 114

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQ-YIQSR---- 277
            S  +L  IH D+KP+N+LL    +  IK+ DFG        H     Y+    +     
Sbjct: 115 DSIHKLGYIHRDIKPDNLLL--DAKGHIKLSDFGLCTGLKKSHR-TEFYRILSHALPSNF 171

Query: 278 -------------------------Y-------YRSPEVLLGIPYDLAIDMWSLGCILVE 305
                                    Y       Y +PEV L   Y+   D WSLG I+ E
Sbjct: 172 LDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231

Query: 306 LHTGEPLFSGKNEVDQMTKII---EVLGMPPGYLLHGASK 342
           +  G P F   N  +   KII   E L  P    L   +K
Sbjct: 232 MLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAK 271

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 30/240 (12%)

Query: 113 EIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQIEVQLLEKINKADI 168
           EI+ L  LGKG++G V K         +A+K I+ +  +   NQ  +E+ +L K      
Sbjct: 2   EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV---- 57

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            S YIV   G F  +  + +  E +       LY         G+  ++ ++    +   
Sbjct: 58  -SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYA--GGVATEGIPEDVLRRITYAVVKG 114

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-IQSRYYRSPE 283
           L FL   E +IIH D+KP N+L+       +K+ DFG S ++  +L +  I  + Y +PE
Sbjct: 115 LKFLKE-EHNIIHRDVKPTNVLVNG--NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPE 171

Query: 284 VLLG------IPYDLAIDMWSLGCILVELHTGE---PLFSGKNEVDQMTKIIEVLGMPPG 334
            +          Y +  D+WSLG  ++E+  G    P  +  N   Q++ I++  G PP 
Sbjct: 172 RIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD--GDPPT 229

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 23/222 (10%)

Query: 117 LLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
            LG GSFG V +        +   VA+K +K+ K          E  ++  ++  ++   
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           Y V L       + L +V EL    +L + +R        ++    +A Q+   + +L S
Sbjct: 62  YGVVLT------HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES 115

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEV 284
                IH DL   NILL S  +  +KI DFG    + Q    Y+   + +      +PE 
Sbjct: 116 KRF--IHRDLAARNILLASDDK--VKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES 171

Query: 285 LLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI 325
           L    +  A D+W  G  L E+ T GE  ++G +    + KI
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 63.1 bits (153), Expect = 5e-11
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 25/244 (10%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +EI   +GKG++G+V K  + ++    A+KI+        + + E  +L+ +     H
Sbjct: 22  DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPN---H 78

Query: 170 SRYIVKLKGHFTWKNH-----LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              +VK  G F   +      L LV EL +  ++  L++     G  L+     +  L  
Sbjct: 79  PN-VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLD-EAMISYILYG 136

Query: 224 ALAFLSSPELS-IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYY 279
           AL  L     + IIH D+K  NILL +     +K++DFG S  +  T  +    + + ++
Sbjct: 137 ALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFW 194

Query: 280 RSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
            +PEV+         YD   D+WSLG   +EL  G+P     + V  + KI      PP 
Sbjct: 195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR---NPPP 251

Query: 335 YLLH 338
            LLH
Sbjct: 252 TLLH 255

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 63.3 bits (154), Expect = 6e-11
 Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 21/230 (9%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
             +++ +L+G+G FG+V    +       A+K++K K   L Q  +     E+   +  +
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMK-KSVLLAQETVSFFEEERDILSISN 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           S +I +L+  F  K++L LV E     +L +L+ N        ++ + +  +L   LA  
Sbjct: 60  SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL-NRYEDQFDEDMAQFYLAEL--VLAIH 116

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC------HVGQTLYQYIQSRYYRSP 282
           S  ++  +H D+KPEN+L+   +   IK+ DFGS+        V   L   + +  Y +P
Sbjct: 117 SVHQMGYVHRDIKPENVLI--DRTGHIKLADFGSAARLTANKMVNSKLP--VGTPDYIAP 172

Query: 283 EVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           EVL  +       Y +  D WSLG I  E+  G   F           I+
Sbjct: 173 EVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM 222

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 62.2 bits (151), Expect = 7e-11
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 33/223 (14%)

Query: 111 RYEIDT-------LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
            YE +        +LGKG++G V  A D   + ++AIK I  +     Q   E   L   
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHS- 60

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNT----NFHGVSLNLTKKFA 218
               +  R IV+  G  +      +  E +   +L  L+R+       +  ++     + 
Sbjct: 61  ---YLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIF---YT 114

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG------QTLYQ 272
           +Q+   L +L   +  I+H D+K +N+L+ +     +KI DFG+S  +       +T   
Sbjct: 115 KQILEGLKYLH--DNQIVHRDIKGDNVLV-NTYSGVVKISDFGTSKRLAGINPCTETFTG 171

Query: 273 YIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLF 313
            +Q   Y +PEV+   P  Y    D+WSLGC +VE+ TG+P F
Sbjct: 172 TLQ---YMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF 211

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 67/238 (28%), Positives = 94/238 (39%), Gaps = 39/238 (16%)

Query: 118 LGKGSFGQVVKAFDHEEKCQ---VAIKIIK------NKKPFLNQAQIEVQLLEKINKADI 168
           LG G+FG VVK     +  +   VA+K +K       KK FL +A +  QL         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYN--LIRNTNFHGVSLNLTKKFAQQLCCALA 226
               IV+L G       L LV EL         L +        L   K+ A Q+   +A
Sbjct: 54  DHPCIVRLIG-VCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDL---KELAHQVAMGMA 109

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQS-----RYY 279
           +L S     +H DL   N+LL +  R   KI DFG S     G   Y+   +     ++Y
Sbjct: 110 YLESKHF--VHRDLAARNVLLVN--RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY 165

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGK--NEVDQMTKIIEVLGMPPG 334
            +PE +    +    D+WS G  L E  + G   +      EV  M +  E L  P  
Sbjct: 166 -APECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEE 222

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 61.9 bits (150), Expect = 9e-11
 Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 20/224 (8%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKADIHSRY 172
           ++G+G FG+V      +     A+K +  K+  + Q +     E  +L  ++  D    +
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD--CPF 58

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV-SLNLTKKFAQQLCCALAFLSSP 231
           IV +   F   + LC + +L+  N  +L  + + HGV S    + +A ++   L  + + 
Sbjct: 59  IVCMTYAFHTPDKLCFILDLM--NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR 116

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEVLL-GIP 289
              +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +PEVL  G  
Sbjct: 117 --FVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTA 172

Query: 290 YDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
           YD + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNV 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 60/250 (24%)

Query: 111 RYEIDTLLGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQA--QIEVQLLEKI 163
            Y  D  +G+G+FG+V +A       +E    VA+K++K +     QA  Q E  L+ + 
Sbjct: 8   EYVRD--IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 65

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN---TNFHGVSLNLTK---- 215
           +  +I     VKL G       +CL+FE ++Y +L   +R+        +S + +     
Sbjct: 66  DHPNI-----VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKC 120

Query: 216 -------------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS 262
                          A+Q+   +A+LS  E   +H DL   N L+   +   +KI DFG 
Sbjct: 121 GLNPLPLSCTEQLCIAKQVAAGMAYLS--ERKFVHRDLATRNCLV--GENMVVKIADFGL 176

Query: 263 SCHVGQTLYQYIQSRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHTG- 309
           S    + +Y    + YY++            PE +    Y    D+W+ G +L E+ +  
Sbjct: 177 S----RNIYS---ADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 229

Query: 310 -EPLFSGKNE 318
            +P +   +E
Sbjct: 230 MQPYYGMAHE 239

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 27/243 (11%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +EI   +GKG++G+V K  + +   + A+KI+        + + E  +L+ ++    H
Sbjct: 18  DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSD---H 74

Query: 170 SRYIVKLKGHFTWKN-----HLCLVFELLSY-NLYNLIRNTNFHGVSLN--LTKKFAQQL 221
              +VK  G +  K+      L LV EL +  ++ +L++     G  +   +      + 
Sbjct: 75  PN-VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRY 278
              L  L       IH D+K  NILL +     +K++DFG S  +  T  +    + + +
Sbjct: 134 LMGLQHLH--VNKTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRRNTSVGTPF 189

Query: 279 YRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           + +PEV+     L   YD   D+WSLG   +EL  G+P  +   ++  M  + ++   PP
Sbjct: 190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA---DLHPMRALFKIPRNPP 246

Query: 334 GYL 336
             L
Sbjct: 247 PTL 249

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 32/254 (12%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           +LD +     +G+GS G V  A        VA+K +  +K    Q + E+   E +   D
Sbjct: 21  YLDNF---IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRD 73

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFH-----GVSLNLTKKFAQQL 221
                +V++   +   + L +V E L    L +++ +T  +      V L + K      
Sbjct: 74  YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLK------ 127

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRY 278
             AL+ L +    +IH D+K ++ILL    R  +K+ DFG    V + + +    + + Y
Sbjct: 128 --ALSVLHAQ--GVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKSLVGTPY 181

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-L 337
           + +PE++  +PY   +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    L
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPKLKNL 239

Query: 338 HGASKTSK-YFDRL 350
           H  S + K + DRL
Sbjct: 240 HKVSPSLKGFLDRL 253

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 33/191 (17%)

Query: 141 KIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY----N 196
           KIIK K    N  +  V  L K N         +KL    T      L+   + Y    +
Sbjct: 47  KIIKAKN--FNAIEPMVHQLMKDNP------NFIKLYYSVTTLKGHVLI---MDYIKDGD 95

Query: 197 LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK 256
           L++L++      +S    KK  +QL  AL  L      IIH D+K EN+L     +  I 
Sbjct: 96  LFDLLKKEGK--LSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVL-YDRAKDRIY 150

Query: 257 IIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
           + D+G    +G        S Y     Y SPE + G  YD++ D W++G +  EL TG+ 
Sbjct: 151 LCDYGLCKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKH 204

Query: 312 LFSGKNEVDQM 322
            F  K + D+ 
Sbjct: 205 PF--KEDEDEE 213

Length = 267

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 63/271 (23%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G+FG+V  A   + K   A+K ++ KK  L + Q+     E+   A+  + ++V+L 
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLR-KKDVLLRNQVAHVKAERDILAEADNEWVVRLY 67

Query: 178 GHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             F  K++L  V + +     +  LIR   F     +L + +  +L CA+   S  ++  
Sbjct: 68  YSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPE---DLARFYIAELTCAVE--SVHKMGF 122

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFG---------------------------------- 261
           IH D+KP+NIL+   +   IK+ DFG                                  
Sbjct: 123 IHRDIKPDNILI--DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDP 180

Query: 262 SSCHVGQTL----------------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVE 305
           ++C  G  L                +  + +  Y +PEVLL   Y    D WS+G IL E
Sbjct: 181 ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240

Query: 306 LHTGEPLFSGKNEVDQMTKIIE---VLGMPP 333
           +  G+P F  +  ++   K+I     L +PP
Sbjct: 241 MLVGQPPFLAQTPLETQMKVINWQTSLHIPP 271

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 61.8 bits (150), Expect = 3e-10
 Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 46/242 (19%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKAD 167
           +Y I  +LG G+ G V+ A    +    A+K++  +   +   N+AQ EV  L      D
Sbjct: 33  KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN---CD 89

Query: 168 IHSRYIVKLKGHFTWKN-----HLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFA 218
             S  IVK    F  K+     ++ ++  +L Y    +L   I++           + F 
Sbjct: 90  FFS--IVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRA------KTNRTFR 141

Query: 219 Q--------QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH----- 265
           +        Q+  A+  + S  +  IH D+K  NILLCS     +K+ DFG S       
Sbjct: 142 EHEAGLLFIQVLLAVHHVHSKHM--IHRDIKSANILLCS--NGLVKLGDFGFSKMYAATV 197

Query: 266 ---VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQM 322
              VG+T   +  + YY +PE+    PY    DM+SLG +L EL T +  F G+N  + M
Sbjct: 198 SDDVGRT---FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVM 254

Query: 323 TK 324
            K
Sbjct: 255 HK 256

Length = 496

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 46/248 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIKN------KKPFLNQAQIEVQLL 160
           +   +   +G+G FG V +        EK  VA+K  KN      ++ FL +A I  Q  
Sbjct: 6   EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF- 64

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
                   H  +IVKL G  T +N + +V EL            N + + L     ++ Q
Sbjct: 65  -------DHP-HIVKLIGVIT-ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQ 115

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ-SRYY 279
           L  ALA+L S     +H D+   N+L+ SP    +K+ DFG        L +Y++   YY
Sbjct: 116 LSTALAYLES--KRFVHRDIAARNVLVSSPD--CVKLGDFG--------LSRYLEDESYY 163

Query: 280 RSPEVLLGIP-----------YDLAIDMWSLG-CILVELHTGEPLFSGKNEVDQMTKII- 326
           ++ +  L I            +  A D+W  G C+   L  G   F G    D + +I  
Sbjct: 164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN 223

Query: 327 -EVLGMPP 333
            E L MPP
Sbjct: 224 GERLPMPP 231

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 64/247 (25%)

Query: 117 LLGKGSFGQV-------------VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
           LLGKG  G+V             +K  D +E       +IK  K  + +   E ++L  +
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKE-------MIKRNK--VKRVLTEQEILATL 58

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +    H  ++  L   F  + +LCLV +      L+ L++      +S  + + +A ++ 
Sbjct: 59  D----HP-FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVL 113

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG----QTLYQYIQSRY 278
            AL +L    L I++ DLKPENILL   +   I + DF  S               +   
Sbjct: 114 LALEYLHL--LGIVYRDLKPENILL--HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSR 169

Query: 279 ----------------------------YRSPEVLLGIPYDLAIDMWSLGCILVELHTGE 310
                                       Y +PEV+ G  +  A+D W+LG +L E+  G 
Sbjct: 170 RSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Query: 311 PLFSGKN 317
             F G N
Sbjct: 230 TPFKGSN 236

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 24/243 (9%)

Query: 94  DDENYDYIIKHG--EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           D E  D   K    E F+  +EI    G GSFG V  A +      VA+K +       N
Sbjct: 7   DPEIADLFYKDDPEEIFVGLHEI----GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN 62

Query: 152 QAQ----IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
           +       EV+ L+++   +        LK H  W   L + + L S +    +      
Sbjct: 63  EKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW---LVMEYCLGSASDLLEVHKKPLQ 119

Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            V +      A Q    LA+L S  +  IH D+K  NILL  P +  +K+ DFGS+    
Sbjct: 120 EVEIAAITHGALQ---GLAYLHSHNM--IHRDIKAGNILLTEPGQ--VKLADFGSAS-KS 171

Query: 268 QTLYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
                ++ + Y+ +PEV+L +    YD  +D+WSLG   +EL   +P     N +  +  
Sbjct: 172 SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 231

Query: 325 IIE 327
           I +
Sbjct: 232 IAQ 234

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 60.2 bits (146), Expect = 4e-10
 Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQ-----------VAIKIIKNKKP-FLNQAQIEVQLLEKIN 164
            LGKG+FG V       E C+           VA+K +++     L   + E+++L+ + 
Sbjct: 11  QLGKGNFGSV-------ELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL- 62

Query: 165 KADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
                   IVK KG  +   + +L LV E L Y         +   +       +A Q+C
Sbjct: 63  ----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQIC 118

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR 277
             + +L S     +H DL   NIL+ S  R  +KI DFG +  + Q    Y      +S 
Sbjct: 119 KGMEYLGS--KRYVHRDLATRNILVESENR--VKIGDFGLTKVLPQDKEYYKVREPGESP 174

Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            ++ +PE L    + +A D+WS G +L EL T
Sbjct: 175 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 50/282 (17%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQV----VKAFDHEE--------------KCQVAI-KI 142
           +KH ++FL  + +   L  G+FG++    ++A   E               KC+  I K 
Sbjct: 140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR 199

Query: 143 IKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIR 202
           +K       Q + E+  L ++N  +I     +K++     + +  ++ +   ++LY+ + 
Sbjct: 200 VKAGSRAAIQLENEILALGRLNHENI-----LKIEEILRSEANTYMITQKYDFDLYSFMY 254

Query: 203 NTNFHGVS---LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL-CSPKRSAIKII 258
           +  F       L  T+   +QL CA+ ++   +L  IH D+K ENI L C  K   I + 
Sbjct: 255 DEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL--IHRDIKLENIFLNCDGK---IVLG 309

Query: 259 DFGSSCHVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE--PL 312
           DFG++    +      Y ++ +    SPE+L G  Y    D+WS G IL+++ + +  P+
Sbjct: 310 DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369

Query: 313 F-SGKNEVDQMTKIIEVLGM-------PPGYL---LHGASKT 343
              G     Q+ KII+ L +       PP  L   +  A   
Sbjct: 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID 411

Length = 501

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 20/242 (8%)

Query: 98  YDYIIKHGEKF---LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+ I++   K     + Y++  ++G+G+FG+V +   H+   +V    + +K   + ++ 
Sbjct: 28  YEKIVRKIRKLQMKAEDYDVVKVIGRGAFGEV-QLVRHKSSQKVYAMKLLSKFEMIKRSD 86

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNL 213
                 E+   A  +S ++V+L   F    +L +V E +   +L NL+ N   + V    
Sbjct: 87  SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKW 143

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
            K +  ++  AL  + S  + +IH D+KP+N+LL   K   +K+ DFG+   + +T    
Sbjct: 144 AKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLL--DKHGHLKLADFGTCMKMDETGMVR 199

Query: 274 IQSRY----YRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
             +      Y SPEVL        Y    D WS+G  L E+  G+  F   + V   +KI
Sbjct: 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 259

Query: 326 IE 327
           ++
Sbjct: 260 MD 261

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 24/233 (10%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINK-----ADIHS 170
           L+GKG++G+V  A +      +A+K ++            +  +++ +        D+  
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQQLCCALAFL 228
             IV+  G  T + +L +  E +   ++ + +R    +G     L + F +Q+   LA+L
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYL 124

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ------SRYYRSP 282
            S    I+H DLK +N+L+        KI DFG S      +Y   Q      S ++ +P
Sbjct: 125 HSK--GILHRDLKADNLLV--DADGICKISDFGISKK-SDDIYDNDQNMSMQGSVFWMAP 179

Query: 283 EV--LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           EV       Y   +D+WSLGC+++E+  G   +S +  +  M K+      PP
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPP 232

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 45/241 (18%)

Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQA----QIEVQLLEKINKADI 168
           LG+G+FG+V            +K  VA+K +K      N A    + E +LL      + 
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELL-----TNF 65

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN--------LTK---- 215
               IVK  G  T  +   +VFE + + +L   +R+       L         LT     
Sbjct: 66  QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL 125

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
           + A Q+   + +L+S     +H DL   N L+       +KI DFG S  V  T Y  + 
Sbjct: 126 QIAVQIASGMVYLAS--QHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRVG 181

Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNEVDQMTKIIEV 328
                   +  PE ++   +    D+WS G +L E+ T   +P +   NE     ++IE 
Sbjct: 182 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-----EVIEC 236

Query: 329 L 329
           +
Sbjct: 237 I 237

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 59.2 bits (143), Expect = 7e-10
 Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR---YI 173
           ++G+G FG+V      +     A+K +  K+  + Q +  + L E+I  + + +    +I
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTGDCPFI 59

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV-SLNLTKKFAQQLCCALAFLSSPE 232
           V +   F   + L  + +L+  N  +L  + + HGV S    + +A ++   L  + +  
Sbjct: 60  VCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR- 116

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEVLL-GIPY 290
             +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +PEVL  G+ Y
Sbjct: 117 -FVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 173

Query: 291 DLAIDMWSLGCILVELHTGEPLFSG-----KNEVDQMTKIIEV 328
           D + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 59.1 bits (143), Expect = 9e-10
 Identities = 69/226 (30%), Positives = 98/226 (43%), Gaps = 41/226 (18%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLLE 161
           + F D  EI    G GSFG V  A D      VAIK +    K           EV+ L+
Sbjct: 15  KLFTDLREI----GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           ++   +        L+ H  W     LV E      Y L   ++     L + KK  Q++
Sbjct: 71  QLRHPNTIEYKGCYLREHTAW-----LVME------YCLGSASDI----LEVHKKPLQEV 115

Query: 222 CCA---------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
             A         LA+L S     IH D+K  NILL  P    +K+ DFGS+  V      
Sbjct: 116 EIAAICHGALQGLAYLHS--HERIHRDIKAGNILLTEP--GTVKLADFGSASLVSPA-NS 170

Query: 273 YIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVEL-HTGEPLFS 314
           ++ + Y+ +PEV+L +    YD  +D+WSLG   +EL     PLF+
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G GSFG V  A D      VAIK +    K           EV+ L++I   +      
Sbjct: 33  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
             L+ H  W   L + + L S +    +       V +      A Q    LA+L S  +
Sbjct: 93  CYLREHTAW---LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQ---GLAYLHSHNM 146

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI---PY 290
             IH D+K  NILL  P +  +K+ DFGS+         ++ + Y+ +PEV+L +    Y
Sbjct: 147 --IHRDIKAGNILLTEPGQ--VKLADFGSASIASPA-NSFVGTPYWMAPEVILAMDEGQY 201

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           D  +D+WSLG   +EL   +P     N +  +  I +
Sbjct: 202 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 238

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 21/229 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQ--VAIKIIKNKKPFLNQAQIEVQLLEKIN-KADIHSRYIV 174
           LG G+FG V K     +K +  VA+KI+KN     N   ++ +LL + N    + + YIV
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---NDPALKDELLREANVMQQLDNPYIV 59

Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           ++ G    ++   LV EL      N     N H    N+T +   Q+   + +L   E +
Sbjct: 60  RMIGICEAES-WMLVMELAELGPLNKFLQKNKHVTEKNIT-ELVHQVSMGMKYLE--ETN 115

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY------YRSPEVLLGI 288
            +H DL   N+LL +   +  KI DFG S  +G     Y    +      + +PE +   
Sbjct: 116 FVHRDLAARNVLLVTQHYA--KISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY 173

Query: 289 PYDLAIDMWSLGCILVELHT-GEPLFSGK--NEVDQMTKIIEVLGMPPG 334
            +    D+WS G ++ E  + G+  + G   NEV QM +  E +  P  
Sbjct: 174 KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQR 222

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 40/239 (16%)

Query: 110 DRYEIDTLLGKGSFGQV-VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           D +EI  ++G+G+FG+V V    H E+   A+KI+ NK   L +A+      E+    + 
Sbjct: 1   DDFEIIKVIGRGAFGEVAVVKMKHTERI-YAMKIL-NKWEMLKRAETACFREERNVLVNG 58

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC------ 222
             ++I  L   F  +N+L LV +                G  L L  KF  +L       
Sbjct: 59  DCQWITTLHYAFQDENYLYLVMDYY------------VGGDLLTLLSKFEDRLPEDMARF 106

Query: 223 ----CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
                 LA  S  +L  +H D+KP+N+LL       I++ DFGS   + Q     +QS  
Sbjct: 107 YIAEMVLAIHSIHQLHYVHRDIKPDNVLL--DMNGHIRLADFGSCLKMNQD--GTVQSSV 162

Query: 279 ------YRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                 Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+   KI+
Sbjct: 163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 28/203 (13%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VV       K  VAIK+I+    ++  F+ +A++ ++L         H   +
Sbjct: 12  LGSGQFG-VVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLS--------HPN-L 61

Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + +V E ++   L N +R      +           +C A+ +L S  
Sbjct: 62  VQLYGVCTKQRPIFIVTEYMANGCLLNYLR-ERKGKLGTEWLLDMCSDVCEAMEYLESN- 119

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEVLL 286
              IH DL   N L+     + +K+ DFG + +V     QY  S+  +       PEV  
Sbjct: 120 -GFIHRDLAARNCLVGE--DNVVKVSDFGLARYVLDD--QYTSSQGTKFPVKWAPPEVFD 174

Query: 287 GIPYDLAIDMWSLGCILVELHTG 309
              +    D+WS G ++ E+ + 
Sbjct: 175 YSRFSSKSDVWSFGVLMWEVFSE 197

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 19/231 (8%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           +K   RYE    +G+G+ G V  A D     +VAIK I  +K    Q + E+ + E +  
Sbjct: 18  KKKYTRYE---KIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKELIINEILVM 70

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            ++ +  IV     F   + L +V E L+  +L +++  T      +    +   Q   A
Sbjct: 71  KELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQ---A 127

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
           L FL + +  +IH D+K +N+LL      ++K+ DFG    +     +    + + Y+ +
Sbjct: 128 LEFLHANQ--VIHRDIKSDNVLL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 183

Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           PEV+    Y   +D+WSLG + +E+  GEP +  +N +  +  +I   G P
Sbjct: 184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTP 233

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 63/271 (23%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G+FG+V  A   +     A+K ++ KK  LN+ Q+     E+   A+  + ++VKL 
Sbjct: 9   LGIGAFGEVCLACKVDTHALYAMKTLR-KKDVLNRNQVAHVKAERDILAEADNEWVVKLY 67

Query: 178 GHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             F  K++L  V + +     +  LIR   F  V   L + +  +L   LA  S  ++  
Sbjct: 68  YSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEV---LARFYIAEL--TLAIESVHKMGF 122

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFG---------------------------------- 261
           IH D+KP+NIL+       IK+ DFG                                  
Sbjct: 123 IHRDIKPDNILI--DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180

Query: 262 SSCHVG---QTLYQYIQSRYYR-------------SPEVLLGIPYDLAIDMWSLGCILVE 305
           S+C  G   +TL Q    ++ R             +PEVLL   Y    D WS+G IL E
Sbjct: 181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240

Query: 306 LHTGEPLFSGKNEVDQMTKII---EVLGMPP 333
           +  G+P F      +   K+I     L +PP
Sbjct: 241 MLVGQPPFLAPTPTETQLKVINWENTLHIPP 271

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)

Query: 112 YEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKI 163
           +E+  +LG G++G+V    K   H+     A+K++K      K       + E Q+LE +
Sbjct: 2   FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
            +      ++V L   F     L L+ + ++      +L +  +F   + +  + +  ++
Sbjct: 62  RRCP----FLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHF---TESEVRVYIAEI 114

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHVGQTLYQYIQSR 277
             AL  L   +L II+ D+K ENILL       + + DFG S        +  Y +  + 
Sbjct: 115 VLALDHLH--QLGIIYRDIKLENILL--DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTI 170

Query: 278 YYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            Y +PEV+ G    +D A+D WSLG +  EL TG   F+   E +  ++I
Sbjct: 171 EYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI 220

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 12/202 (5%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           ++G+GS+ +V+     +     A+K++K +    ++    VQ  + + +    + ++V L
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
              F   + L LV E ++    ++++ R      +     + +A ++C AL FL   E  
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLH--ERG 116

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           II+ DLK +N+LL       IK+ D+G        G T   +  +  Y +PE+L G  Y 
Sbjct: 117 IIYRDLKLDNVLL--DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG 174

Query: 292 LAIDMWSLGCILVELHTGEPLF 313
            ++D W+LG ++ E+  G   F
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 31/217 (14%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIK------NKKPFLNQAQIEVQ 158
           +       LG G+FG+VV+A  +     +   +VA+K++K       ++  +++ +I   
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           L    N        IV L G  T    + ++ E   Y +L N +R      ++L     F
Sbjct: 95  LGNHEN--------IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSF 146

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           + Q+   +AFL+S   + IH DL   N+LL   K   +KI DFG +  +      Y+   
Sbjct: 147 SYQVAKGMAFLASK--NCIHRDLAARNVLLTHGK--IVKICDFGLARDIMND-SNYVVKG 201

Query: 278 YYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
             R      +PE +    Y    D+WS G +L E+ +
Sbjct: 202 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 57.6 bits (139), Expect = 4e-09
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 20/219 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK---INKADIHSRYIV 174
           +GKG+FGQV +    + +   A+K++ +KK  + + ++   + E+   +      S +IV
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVL-SKKEIVAKKEVAHTIGERNILVRTLLDESPFIV 59

Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            LK  F   + L LV + +S     ++L +   F   S +  K +  +L  AL  L   +
Sbjct: 60  GLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRF---SEDRAKFYIAELVLALEHLH--K 114

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP 289
             I++ DLKPENILL       I + DFG S       +T   +  +  Y +PEVLL   
Sbjct: 115 YDIVYRDLKPENILL--DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEK 172

Query: 290 -YDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKII 326
            Y   +D WSLG ++ E+  G  P ++   +  QM + I
Sbjct: 173 GYTKHVDFWSLGVLVFEMCCGWSPFYA--EDTQQMYRNI 209

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 20/195 (10%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKN----KKPFLNQAQIEVQLLEKINKADIHSRY 172
            +GKG FG V+      +K  VA+K +K+     + FL +A +   L             
Sbjct: 13  TIGKGEFGDVMLGDYRGQK--VAVKCLKDDSTAAQAFLAEASVMTTLRHP---------N 61

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +V+L G     N L +V E ++  +L + +R+     ++L     FA  +C  + +L   
Sbjct: 62  LVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK 121

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
               +H DL   N+L+ S    A K+ DFG +    Q          + +PE L    + 
Sbjct: 122 N--FVHRDLAARNVLV-SEDLVA-KVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFS 177

Query: 292 LAIDMWSLGCILVEL 306
              D+WS G +L E+
Sbjct: 178 TKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 22/208 (10%)

Query: 116 TLLGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIE-VQLLEKINKADIHSRYI 173
            ++G+GS+ +V+   + ++  ++ A+K+IK K+   +   I+ VQ  + + +   +  ++
Sbjct: 1   RVIGRGSYAKVLLV-ELKKTRRIYAMKVIK-KELVNDDEDIDWVQTEKHVFETASNHPFL 58

Query: 174 VKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNF---HGVSLNLTKKFAQQLCCALAFL 228
           V L   F  ++ L  V E +S    ++++ R       H       + ++ ++  AL FL
Sbjct: 59  VGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHA------RFYSAEISLALNFL 112

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVL 285
              E  II+ DLK +N+LL +     IK+ D+G        G T   +  +  Y +PE+L
Sbjct: 113 H--ERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEIL 168

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF 313
            G  Y  ++D W+LG ++ E+  G   F
Sbjct: 169 RGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 72/250 (28%), Positives = 108/250 (43%), Gaps = 45/250 (18%)

Query: 110 DRYEIDTLLGKGSFGQV--VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           D +EI  ++G+G+FG+V  VK  +  +    A+KI+ NK   L +A+      E+    +
Sbjct: 1   DDFEILKVIGRGAFGEVAVVKMKNTGQV--YAMKIL-NKWEMLKRAETACFREERDVLVN 57

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC----- 222
              R+I  L   F  +N+L LV +                G  L L  KF  +L      
Sbjct: 58  GDRRWITNLHYAFQDENNLYLVMDYYV------------GGDLLTLLSKFEDRLPEDMAR 105

Query: 223 -----CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
                  LA  S  +L  +H D+KP+N+LL   K   I++ DFGS   +       +QS 
Sbjct: 106 FYLAEMVLAIDSVHQLGYVHRDIKPDNVLL--DKNGHIRLADFGSCLRLLAD--GTVQSN 161

Query: 278 Y------YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                  Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+   KI+
Sbjct: 162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221

Query: 327 ---EVLGMPP 333
              E    PP
Sbjct: 222 NHKEHFQFPP 231

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 57.1 bits (138), Expect = 6e-09
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 52/260 (20%)

Query: 103 KHGEKFLDRYE-----IDTL------------LGKGSFGQVVKAFDHEEKCQV-AIKIIK 144
           K+ + FL RYE     I  L            +G+G+FG+V +   H+   QV A+K++ 
Sbjct: 19  KNIDNFLSRYEKAAEKITKLRMKAEDFDVIKVIGRGAFGEV-QLVRHKSSKQVYAMKLL- 76

Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRN 203
           +K   + ++       E+   A  +S +IV+L   F    +L +V E +   +L NL+ N
Sbjct: 77  SKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN 136

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
              + +     + +  ++  AL  + S  +  IH D+KP+N+LL   K   +K+ DFG  
Sbjct: 137 ---YDIPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTC 189

Query: 262 ----------SSCHVGQTLYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELH 307
                         VG     YI      SPEVL        Y    D WS+G  L E+ 
Sbjct: 190 MKMDANGMVRCDTAVGTP--DYI------SPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241

Query: 308 TGEPLFSGKNEVDQMTKIIE 327
            G+  F   + V   +KI++
Sbjct: 242 VGDTPFYADSLVGTYSKIMD 261

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 56.6 bits (136), Expect = 6e-09
 Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 40/236 (16%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ----IEVQLLEKI 163
           F D  EI    G GSFG V  A D      VAIK +       N+       EV+ L+K+
Sbjct: 17  FSDLREI----GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              +        L+ H  W     LV E    +  +L          L + KK  Q++  
Sbjct: 73  RHPNTIQYRGCYLREHTAW-----LVMEYCLGSASDL----------LEVHKKPLQEVEI 117

Query: 224 A---------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           A         LA+L S  +  IH D+K  NILL  P    +K+ DFGS+  +      ++
Sbjct: 118 AAVTHGALQGLAYLHSHNM--IHRDVKAGNILLSEP--GLVKLGDFGSASIMAPA-NXFV 172

Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            + Y+ +PEV+L +    YD  +D+WSLG   +EL   +P     N +  +  I +
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.8 bits (137), Expect = 7e-09
 Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 33/237 (13%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           Y +   L  GS G+V  A    +   V +KI   +K       IE  LL+ +N   +   
Sbjct: 68  YTVIKTLTPGSEGRVFVATKPGQPDPVVLKI--GQKG---TTLIEAMLLQNVNHPSV--- 119

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
             +++K         C+V    S +LY  +       + ++      +Q+   L +L + 
Sbjct: 120 --IRMKDTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHA- 175

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-CHVGQ-TLYQYIQSRYYRSPEVLLGIP 289
              IIH D+K ENI +       + I D G++   V          +    +PEVL    
Sbjct: 176 -QRIIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDK 232

Query: 290 YDLAIDMWSLGCILVEL----HT---------GEPLFSGKNEVDQMTKIIEVLGMPP 333
           Y+   D+WS G +L E+     T          E + S  +    + KII  L + P
Sbjct: 233 YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS---HLLKIISTLKVHP 286

Length = 357

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 26/211 (12%)

Query: 109 LDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEK 162
           +D  ++  L  LG G FG VVK      +  VAIK+IK    ++  F+ +A++ ++L   
Sbjct: 1   IDPKDLTFLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKL--- 56

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
                     +V+L G  T +  + +V E +S   L N +R         +   +  + +
Sbjct: 57  ------SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDV 109

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY-- 278
           C  +A+L S +   IH DL   N L+    +  +K+ DFG S +V    Y   + S++  
Sbjct: 110 CEGMAYLESKQF--IHRDLAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSSVGSKFPV 165

Query: 279 -YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  PEVLL   +    D+W+ G ++ E+++
Sbjct: 166 RWSPPEVLLYSKFSSKSDVWAFGVLMWEVYS 196

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 55.7 bits (134), Expect = 9e-09
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 26/201 (12%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +   EK +VAIK I+    +++ F+ +AQ+ ++L         H + +
Sbjct: 12  IGSGQFGLVWLGY-WLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL--------SHPK-L 61

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G  T ++ +CLVFE + +   +          S          +C  +A+L S   
Sbjct: 62  VQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS-- 119

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
           ++IH DL   N L+   +   +K+ DFG +  V     QY  S        + SPEV   
Sbjct: 120 NVIHRDLAARNCLV--GENQVVKVSDFGMTRFVLDD--QYTSSTGTKFPVKWSSPEVFSF 175

Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 176 SKYSSKSDVWSFGVLMWEVFS 196

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 28/241 (11%)

Query: 112 YEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKI 163
           +E+  +LG G++G+V    K   H+     A+K++K      K       + E Q+LE I
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
            +    S ++V L   F     L L+ + ++      +L +   F        + ++ ++
Sbjct: 62  RQ----SPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERF---KEQEVQIYSGEI 114

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHVGQTLYQYIQSR 277
             AL  L   +L II+ D+K ENILL S     + + DFG S        +  Y +  + 
Sbjct: 115 VLALEHLH--KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAYSFCGTI 170

Query: 278 YYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE-VLGMPPG 334
            Y +P+++ G    +D A+D WS+G ++ EL TG   F+   E +   +I   +L   P 
Sbjct: 171 EYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 230

Query: 335 Y 335
           Y
Sbjct: 231 Y 231

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 32/216 (14%)

Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
           E +LL +++   + +   V++ G  T     CLV      +LY  +       + L    
Sbjct: 210 EARLLRRLSHPAVLALLDVRVVGGLT-----CLVLPKYRSDLYTYL-GARLRPLGLAQVT 263

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             A+QL  A+ ++      IIH D+K EN+L+  P+   I + DFG++C    +   +  
Sbjct: 264 AVARQLLSAIDYIHGE--GIIHRDIKTENVLVNGPED--ICLGDFGAACFARGS---WST 316

Query: 276 SRYY--------RSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVD----- 320
             +Y         +PEVL G PY  ++D+WS G ++ E  +HT   LFS     +     
Sbjct: 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS-LFSASRGDERRPYD 375

Query: 321 -QMTKIIEVLGMPPG-YLLHGASK-TSKYFDRLSDN 353
            Q+ +II    +    +  H  S+  S+Y  R + N
Sbjct: 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARN 411

Length = 461

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 39/245 (15%)

Query: 118 LGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHS 170
           LG+G+FG+V K      +       VAIK +K         + + E +L+     +D+  
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELM-----SDLQH 67

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYN-LIRNTNFHGVSLNLTKK------------ 216
             IV L G  T +   C++FE L++ +L+  L+RN+    V      +            
Sbjct: 68  PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127

Query: 217 -FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             A Q+   + +LSS     +H DL   N L+     + +KI DFG S  +    Y  +Q
Sbjct: 128 HIAIQIAAGMEYLSSHH--FVHRDLAARNCLV-GEGLT-VKISDFGLSRDIYSADYYRVQ 183

Query: 276 SR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKN-EVDQMTKIIE 327
           S+      +  PE +L   +    D+WS G +L E+ +   +P +   N EV +M +  +
Sbjct: 184 SKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ 243

Query: 328 VLGMP 332
           +L  P
Sbjct: 244 LLPCP 248

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 53/240 (22%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIK---NKKPFLNQAQIEVQLL 160
            DR  +   LG+G+FGQVVKA      +  E   VA+K++K    +K   +    E++++
Sbjct: 11  RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVS-EMEMM 69

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN----------TNFHGV 209
           + I K   H   I+ L G  T +  L +V E  ++ NL + +R            +    
Sbjct: 70  KMIGK---HKN-IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125

Query: 210 SLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              LT+K    FA Q+   + FL+S +   IH DL   N+L+   +   +KI DFG +  
Sbjct: 126 EETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVT--EDHVMKIADFGLARD 181

Query: 266 VGQTLYQYIQSRYYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +      +I   YYR            +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 182 I-----HHID--YYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 54.0 bits (129), Expect = 5e-08
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 16/219 (7%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAIK +  ++    +  I   L+ + NK    +  IV   
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 82

Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L+  +L +++  T      +    +   Q   AL FL S +  +I
Sbjct: 83  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALDFLHSNQ--VI 137

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y   
Sbjct: 138 HRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195

Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           +D+WSLG + +E+  GEP +  +N +  +  +I   G P
Sbjct: 196 VDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTP 233

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 54.0 bits (129), Expect = 5e-08
 Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 16/219 (7%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83

Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L+  +L +++  T      +    +   Q   AL FL S +  +I
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSNQ--VI 138

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLA 293
           H D+K +NILL      ++K+ DFG    +          + + Y+ +PEV+    Y   
Sbjct: 139 HRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           +D+WSLG + +E+  GEP +  +N +  +  +I   G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP 234

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 54.2 bits (130), Expect = 5e-08
 Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 27/240 (11%)

Query: 112 YEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKI 163
           +E+  +LG G++G+V    K   H+     A+K+++      K   +   + E  +LE +
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
            +    S ++V L   F  +  L L+ + +S      +L +  NF   S +  + ++ ++
Sbjct: 62  RQ----SPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNF---SEDEVRFYSGEI 114

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV----GQTLYQYIQSR 277
             AL  L   +L I++ D+K ENILL S     + + DFG S        +  Y +  + 
Sbjct: 115 ILALEHLH--KLGIVYRDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERTYSFCGTI 170

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE-VLGMPPGY 335
            Y +PE++ G   +  A+D WSLG ++ EL TG   F+ + E +  +++   +L   P +
Sbjct: 171 EYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF 230

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 53.9 bits (129), Expect = 7e-08
 Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 49/266 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +E   ++G+G+FG+V      +     A+KI++ K   L + Q+     E+    +  
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILR-KADMLEKEQVAHIRAERDILVEAD 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             ++VK+   F  K +L L+ E L   ++  L+   +   +S   T+ +  +    LA  
Sbjct: 60  GAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAE--TVLAID 115

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--------------------- 267
           +  +L  IH D+KP+N+LL +  +  +K+ DFG    +                      
Sbjct: 116 AIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSF 173

Query: 268 -----------------QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE 310
                            Q  Y  + +  Y +PEV +   Y+   D WSLG I+ E+  G 
Sbjct: 174 QNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233

Query: 311 PLFSGKNEVDQMTKII---EVLGMPP 333
           P F  +   +   K++   E L  PP
Sbjct: 234 PPFCSETPQETYRKVMNWKETLVFPP 259

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 53.1 bits (127), Expect = 9e-08
 Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 117 LLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           ++G+GS+ +V+    K  +     +V  K + N    ++  Q E  + E+   A  H  +
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---ASNHP-F 57

Query: 173 IVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           +V L   F  ++ L  V E ++    ++++ R      +     + ++ ++  AL +L  
Sbjct: 58  LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLH- 113

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
            E  II+ DLK +N+LL S     IK+ D+G        G T   +  +  Y +PE+L G
Sbjct: 114 -ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 170

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLF 313
             Y  ++D W+LG ++ E+  G   F
Sbjct: 171 EDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 53.5 bits (128), Expect = 9e-08
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 53/266 (19%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +E   ++G+G+FG+V      +     A+KI++ K   L + Q+     E+    +  S 
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILR-KADMLEKEQVGHIRAERDILVEADSL 61

Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC--ALAFL 228
           ++VK+   F  K +L L+ E L   ++  L+   +       LT++  Q       LA  
Sbjct: 62  WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAID 115

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-----------------LY 271
           S  +L  IH D+KP+N+LL S  +  +K+ DFG    + +                   +
Sbjct: 116 SIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTF 173

Query: 272 QYIQSRY---------------------YRSPEVLLGIPYDLAIDMWSLGCILVELHTGE 310
           Q + S+                      Y +PEV +   Y+   D WSLG I+ E+  G 
Sbjct: 174 QNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233

Query: 311 PLFSGKNEVDQMTKII---EVLGMPP 333
           P F  +   +   K++   E L  PP
Sbjct: 234 PPFCSETPQETYKKVMNWKETLIFPP 259

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 38/236 (16%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +EI  ++G+G+FG+V             +K+    K F  +   + ++L++   A     
Sbjct: 3   FEILKVIGRGAFGEVA-----------VVKLKNADKVFAMKILNKWEMLKRAETACFREE 51

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC--------- 222
             V + G   W   L   F+    NLY L+ +    G  L L  KF  +L          
Sbjct: 52  RDVLVNGDNQWITTLHYAFQD-ENNLY-LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLA 109

Query: 223 -CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
              +A  S  +L  +H D+KP+NIL+       I++ DFGS   + +     +QS     
Sbjct: 110 EMVIAIDSVHQLHYVHRDIKPDNILM--DMNGHIRLADFGSCLKLMED--GTVQSSVAVG 165

Query: 279 ---YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+   KI+
Sbjct: 166 TPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 221

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 26/238 (10%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEE----KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
             E   +LG G+FG V K     E    K  VAIK+++ +     +A  E+ L E    A
Sbjct: 8   ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEI-LDEAYVMA 64

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN--LTKKFAQQLCC 223
            +   ++V+L G     + + L+ +L+    L + +RN   H  ++       +  Q+  
Sbjct: 65  SVDHPHVVRLLG-ICLSSQVQLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAK 120

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRY--- 278
            +++L   E  ++H DL   N+L+ +P    +KI DFG +    V +  Y     +    
Sbjct: 121 GMSYLE--EKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLDVDEKEYHAEGGKVPIK 176

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN--EVDQMTKIIEVLGMPP 333
           + + E +L   Y    D+WS G  + EL T G   + G    E+  + +  E L  PP
Sbjct: 177 WMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPP 234

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 17/224 (7%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           YE+  ++G+G+FG+V +   H+   +V    + +K   + ++       E+   A  +S 
Sbjct: 45  YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 103

Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           ++V+L   F    +L +V E +   +L NL+ N +         + +  ++  AL  + S
Sbjct: 104 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE---KWARFYTAEVVLALDAIHS 160

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT----LYQYIQSRYYRSPEVLL 286
             +  IH D+KP+N+LL   K   +K+ DFG+   + +         + +  Y SPEVL 
Sbjct: 161 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 216

Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                  Y    D WS+G  L E+  G+  F   + V   +KI+
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVG----- 267
           K+ +Q+   +A+L      ++H D+K  N++L       IK+IDFG +     VG     
Sbjct: 106 KYTKQILDGVAYLH--NNCVVHRDIKGNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTH 161

Query: 268 -QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              L     + Y+ +PEV+    Y    D+WS+GC + E+ TG+P  +  + +  M  I 
Sbjct: 162 SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG 221

Query: 327 EVLG-MPP 333
              G MP 
Sbjct: 222 AHRGLMPR 229

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 38/218 (17%)

Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSR 171
           LG+G+FG+V  A  H     ++K  VA+K +K       Q  Q E +LL  +       +
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-----QHQ 67

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG----------------VSLNLTK 215
           +IV+  G  T    L +VFE + +   +L R    HG                ++L    
Sbjct: 68  HIVRFYGVCTEGRPLLMVFEYMRHG--DLNRFLRSHGPDAKILAGGEDVAPGQLTLGQML 125

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             A Q+   + +L+S  L  +H DL   N L+   +   +KI DFG S  +  T Y  + 
Sbjct: 126 AIASQIASGMVYLAS--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYSTDYYRVG 181

Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            R      +  PE +L   +    D+WS G +L E+ T
Sbjct: 182 GRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 23/204 (11%)

Query: 118 LGKGSFGQV-VKAFDHEEKCQ---VAIKIIKNKKPFLNQAQIEVQLLEKIN-KADIHSRY 172
           LG+G FG+V +  +D         VA+K +K +       Q      ++IN    ++   
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE----CGQQNTSGWKKEINILKTLYHEN 67

Query: 173 IVKLKGHFTWKNH--LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           IVK KG  + +    L L+ E +   L +L      H ++L     FAQQ+C  +A+L S
Sbjct: 68  IVKYKGCCSEQGGKGLQLIMEYVP--LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHS 125

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSR----YYRSPEV 284
                IH DL   N+LL       +KI DFG +  V  G   Y+  +      ++ + E 
Sbjct: 126 QHY--IHRDLAARNVLL--DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVEC 181

Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
           L    +  A D+WS G  L EL T
Sbjct: 182 LKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 24/211 (11%)

Query: 109 LDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEK 162
           ++R +I     LG G +G+V +    +    VA+K +K      + FL +A +       
Sbjct: 3   MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV------- 55

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQL 221
               +I    +V+L G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+
Sbjct: 56  --MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 113

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY-- 278
             A+ +L     + IH DL   N L+   +   +K+ DFG S    G T   +  +++  
Sbjct: 114 SSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 169

Query: 279 -YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +PE L    + +  D+W+ G +L E+ T
Sbjct: 170 KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 51.1 bits (122), Expect = 3e-07
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 31/209 (14%)

Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D E      QVA+K +K  +    +   + E+++L      +++  
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR-----NLYHE 66

Query: 172 YIVKLKGHFT--WKNHLCLVFELL---SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            IVK KG  T    N + L+ E L   S   Y L RN N   ++L    K+A Q+C  + 
Sbjct: 67  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY-LPRNKN--KINLKQQLKYAVQICKGMD 123

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YY 279
           +L S +   +H DL   N+L+ S  +  +KI DFG +  + +T  +Y   +       ++
Sbjct: 124 YLGSRQY--VHRDLAARNVLVESEHQ--VKIGDFGLTKAI-ETDKEYYTVKDDLDSPVFW 178

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +PE L+   + +A D+WS G  L EL T
Sbjct: 179 YAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 235 IIHCDLKPENILLC-SPKRSAIKIIDFGSSC-------HVGQTL---YQYIQSRYYRSPE 283
           I+H DLKP+NI++  +  R   K++DFG              TL    + + +  Y +PE
Sbjct: 100 IVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPE 159

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
            L G P     D+++ G I +E  TG+ +  G
Sbjct: 160 QLRGEPVTPNSDLYAWGLIFLECLTGQRVVQG 191

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 51.1 bits (122), Expect = 3e-07
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 17/205 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAIK +  ++    +  I   L+ + NK   H   IV   
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK---HPN-IVNYL 82

Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             +   + L +V E L+  +L +++  T    G    + ++  Q    AL FL S +  +
Sbjct: 83  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 136

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
           IH D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y  
Sbjct: 137 IHRDIKSDNILL--GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 194

Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
            +D+WSLG + +E+  GEP +  +N
Sbjct: 195 KVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 29/220 (13%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VV       + +VAIK I     +++ F+ +A++ ++L         H + +
Sbjct: 12  LGSGQFG-VVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKL--------SHPK-L 61

Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  L +V E +    L N +R      +S ++     Q +C  + +L    
Sbjct: 62  VQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK-LSKDMLLSMCQDVCEGMEYLERN- 119

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLL 286
            S IH DL   N L+ S     +K+ DFG + +V     +Y  S        +  PEV  
Sbjct: 120 -SFIHRDLAARNCLVSS--TGVVKVSDFGMTRYVLDD--EYTSSSGAKFPVKWSPPEVFN 174

Query: 287 GIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI 325
              Y    D+WS G ++ E+ T G+  F  K+  + +  I
Sbjct: 175 FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 50.1 bits (119), Expect = 7e-07
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 37/215 (17%)

Query: 117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRY 172
           ++G+G+FGQV+KA   ++  +   AIK +K      +      E+++L K+     H   
Sbjct: 2   VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPN 57

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF----------HGVSLNLTK----KF 217
           I+ L G    + +L L  E   + NL + +R +            +  +  L+      F
Sbjct: 58  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 117

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A  +   + +LS  +   IH DL   NIL+   +    KI DFG S   GQ +  Y++  
Sbjct: 118 AADVARGMDYLS--QKQFIHRDLAARNILV--GENYVAKIADFGLS--RGQEV--YVKKT 169

Query: 278 YYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
             R P   + I       Y    D+WS G +L E+
Sbjct: 170 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 204

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 49.8 bits (119), Expect = 8e-07
 Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 27/205 (13%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKADIHS 170
            +GKG+FG V K    +   +VA+K  ++      K+ FL +A+I    L++ +  +I  
Sbjct: 2   KIGKGNFGDVYKGV-LKGNTEVAVKTCRSTLPPDLKRKFLQEAEI----LKQYDHPNI-- 54

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              VKL G    K  + +V EL+   +L   +R    + +++    + +      + +L 
Sbjct: 55  ---VKLIGVCVQKQPIYIVMELVPGGSLLTFLR-KKKNRLTVKKLLQMSLDAAAGMEYLE 110

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRSPEV 284
           S   + IH DL   N L+   + + +KI DFG S      +Y            + +PE 
Sbjct: 111 SK--NCIHRDLAARNCLV--GENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEA 166

Query: 285 LLGIPYDLAIDMWSLGCILVELHTG 309
           L    Y    D+WS G +L E  + 
Sbjct: 167 LNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 49.6 bits (118), Expect = 8e-07
 Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 20/197 (10%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY---- 172
           LLGKG+FG+V K    ++K  VA+K  K   P     +++++ L    +A I  +Y    
Sbjct: 2   LLGKGNFGEVFKG-TLKDKTPVAVKTCKEDLP----QELKIKFLS---EARILKQYDHPN 53

Query: 173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           IVKL G  T +  + +V EL+    +          +      KFA      +A+L S  
Sbjct: 54  IVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK- 112

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGI 288
            + IH DL   N L+   + + +KI DFG S      +Y     +     + +PE L   
Sbjct: 113 -NCIHRDLAARNCLV--GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYG 169

Query: 289 PYDLAIDMWSLGCILVE 305
            Y    D+WS G +L E
Sbjct: 170 RYSSESDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 51/251 (20%)

Query: 118 LGKGSFGQVVKA------FDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
           LG+ +FG++ K        DH +   VAIK +K  N      + Q E  L+     A++H
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQ--LVAIKTLKDINNPQQWGEFQQEASLM-----AELH 65

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNL-------------------IRNTNFHGV 209
              IV L G  T +  +C++FE L+  +L+                     ++++  HG 
Sbjct: 66  HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT 269
            L++    A Q+   + +LSS     +H DL   NIL+   ++  +KI D G S  +   
Sbjct: 126 FLHI----AIQIAAGMEYLSSH--FFVHKDLAARNILI--GEQLHVKISDLGLSREIYSA 177

Query: 270 LYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHTG--EPLFSGKN-EVDQ 321
            Y  +Q +      +  PE ++   +    D+WS G +L E+ +   +P +   N EV +
Sbjct: 178 DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237

Query: 322 MTKIIEVLGMP 332
           M +  ++L   
Sbjct: 238 MVRKRQLLPCS 248

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           L +  +  ++G+G FG V++     +K  VA+K IK     + FL +  +  +L      
Sbjct: 5   LQKLTLGEIIGEGEFGAVLQGEYTGQK--VAVKNIKCDVTAQAFLEETAVMTKL------ 56

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
              H + +V+L G     N L +V EL+S  NL N +R      VS+    +F+  +   
Sbjct: 57  ---HHKNLVRLLG-VILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEG 112

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
           + +L S +L  +H DL   NIL+   +    K+ DFG +      +        + +PE 
Sbjct: 113 MEYLESKKL--VHRDLAARNILV--SEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEA 168

Query: 285 LLGIPYDLAIDMWSLGCILVEL 306
           L    +    D+WS G +L E+
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEV 190

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)

Query: 115 DTLLGKGSFGQVVKAFDHEE--KCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHS 170
           + ++G+G+FGQV++A   ++  K   AIK++K      +      E+++L K+     H 
Sbjct: 7   EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG----HH 62

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF----------HGVSLNLTK---- 215
             I+ L G    + +L +  E   Y NL + +R +            HG +  LT     
Sbjct: 63  PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLL 122

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
           +FA  +   + +LS  E   IH DL   N+L+   +  A KI DFG S   G+ +  Y++
Sbjct: 123 QFASDVATGMQYLS--EKQFIHRDLAARNVLV--GENLASKIADFGLS--RGEEV--YVK 174

Query: 276 SRYYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
               R P   + I       Y    D+WS G +L E+
Sbjct: 175 KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 64/261 (24%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G G+FG+V      +     A+K ++ K   L + Q      E+   A+  + ++VKL 
Sbjct: 9   IGIGAFGEVCLVRKVDTNALYAMKTLR-KADVLMRNQAAHVKAERDILAEADNEWVVKLY 67

Query: 178 GHFTWKNHLCLVFE------LLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
             F  K++L  V +      ++S     LIR   F     +L + +  +L CA+   S  
Sbjct: 68  YSFQDKDNLYFVMDYIPGGDMMSL----LIRLGIFEE---DLARFYIAELTCAIE--SVH 118

Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG---------------SSCH----------- 265
           ++  IH D+KP+NIL+   +   IK+ DFG                  H           
Sbjct: 119 KMGFIHRDIKPDNILI--DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEE 176

Query: 266 ---VGQTLYQYIQSRYYR-----------------SPEVLLGIPYDLAIDMWSLGCILVE 305
              + +   + ++ R  R                 +PEVLL   Y    D WS+G IL E
Sbjct: 177 WSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236

Query: 306 LHTGEPLFSGKNEVDQMTKII 326
           +  G+P F      +   K+I
Sbjct: 237 MLVGQPPFLADTPAETQLKVI 257

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 18/195 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +GKG FG V+   D+    +VA+K IKN    + FL +A +  QL         HS  + 
Sbjct: 14  IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 63

Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L      K  L +V E ++  +L + +R+     +  +   KF+  +C A+ +L +   
Sbjct: 64  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-- 121

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + +H DL   N+L+   + +  K+ DFG +     T         + +PE L    +   
Sbjct: 122 NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179

Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+++
Sbjct: 180 SDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 43/245 (17%)

Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
           LG+G+FG+V  A        ++K  VA+K +K+     +K F  +A++   L        
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-------- 64

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL-------NLTKK--- 216
               +IVK  G     + L +VFE + + +L   +R      V +        LT+    
Sbjct: 65  -QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQML 123

Query: 217 -FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             AQQ+   + +L+S     +H DL   N L+   +   +KI DFG S  V  T Y  + 
Sbjct: 124 HIAQQIAAGMVYLASQHF--VHRDLATRNCLV--GENLLVKIGDFGMSRDVYSTDYYRVG 179

Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFS-GKNEVDQMTKIIE 327
                   +  PE ++   +    D+WSLG +L E+ T   +P +    NEV +      
Sbjct: 180 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 239

Query: 328 VLGMP 332
           VL  P
Sbjct: 240 VLQRP 244

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 49.0 bits (117), Expect = 4e-06
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 68/247 (27%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC--QVAIKIIKN--------KKPFLNQAQIEVQ 158
           + RY+I  L+GKG  G+V  A+D    C  +VA+K I+         KK FL +A+I   
Sbjct: 1   MQRYDIIRLIGKGGMGEVYLAYD--PVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD 58

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLT 214
           L        IH   IV +   ++  +    V+  + Y     L +L+++         L+
Sbjct: 59  L--------IHPG-IVPV---YSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKES---LS 103

Query: 215 KKFAQQ------------LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS 262
           K+ A++            +C  + ++ S    ++H DLKP+NILL       + I+D+G+
Sbjct: 104 KELAEKTSVGAFLSIFHKICATIEYVHSK--GVLHRDLKPDNILL--GLFGEVVILDWGA 159

Query: 263 --------------------SCHVGQTLY-QYIQSRYYRSPEVLLGIPYDLAIDMWSLGC 301
                                C+   T+  + + +  Y +PE LLG+P   + D+++LG 
Sbjct: 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGV 219

Query: 302 ILVELHT 308
           IL ++ T
Sbjct: 220 ILYQMLT 226

Length = 932

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 20/223 (8%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG G FG+V +    + + +VAIKI+K+         Q EVQ L+++    + S + V  
Sbjct: 14  LGSGYFGEVWEGL-WKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS 72

Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSSPEL 233
            G   +     ++ EL+   +L   +R+    G  L +      A Q+   +A+L   E 
Sbjct: 73  VGEPVY-----IITELMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLE--EQ 123

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY---YRSPEVLLGIPY 290
           + IH DL   NIL+   +    K+ DFG +  + + +Y     +    + +PE      +
Sbjct: 124 NSIHRDLAARNILV--GEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTF 181

Query: 291 DLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
               D+WS G +L E+ T G+  + G N  +   +I     MP
Sbjct: 182 STKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP 224

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 47.9 bits (114), Expect = 6e-06
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 19/111 (17%)

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYI 274
           A+Q+   +A+L      I+H D+KP N+L+ S K   +KI DFG S  + QT+      +
Sbjct: 174 ARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKN--VKIADFGVSRILAQTMDPCNSSV 229

Query: 275 QSRYYRSPEVLLGIPYDL--------AIDMWSLGCILVELHTGE-PLFSGK 316
            +  Y SPE    I  DL        A D+WSLG  ++E + G  P   G+
Sbjct: 230 GTIAYMSPE---RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR 277

Length = 353

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 47.3 bits (112), Expect = 8e-06
 Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 39/233 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G FGQVV+A  +       ++   VA+K++K+     + A +  E++L+
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--VSLNLTKKF 217
           + I K     + I+ L G  T +  L ++ E  +  NL   +R     G   + ++TK  
Sbjct: 72  KLIGK----HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVP 127

Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L S     IH DL   N+L+   + + +KI DFG +  
Sbjct: 128 EEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVLVT--EDNVMKIADFGLARG 183

Query: 266 VGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           V    Y    S       + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 184 VHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)

Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 10  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 64

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 65  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 118

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q   +     +PE 
Sbjct: 119 E--RMNYVHRDLRAANILV--GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174

Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 175 ALYGRFTIKSDVWSFGILLTELTT 198

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 31/214 (14%)

Query: 109 LDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEK 162
           +DR  I  L  LG G FG+V +         VA+K +K    + K FL +AQI    ++K
Sbjct: 3   IDRTSIQLLRKLGAGQFGEVWEGL-WNNTTPVAVKTLKPGTMDPKDFLAEAQI----MKK 57

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQL 221
           +    +   Y V      T +  + +V EL+ Y +L   ++      + L      A Q+
Sbjct: 58  LRHPKLIQLYAV-----CTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQV 112

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
              +A+L +   + IH DL   N+L+   + +  K+ DFG +  + + +Y+   +R    
Sbjct: 113 ASGMAYLEA--QNYIHRDLAARNVLV--GENNICKVADFGLARVIKEDIYE---AREGAK 165

Query: 279 ----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE  L   + +  D+WS G +L E+ T
Sbjct: 166 FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            KDLI ++L  DP+KR++    L+H FF
Sbjct: 227 AKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 42/224 (18%)

Query: 118 LGKGSFGQV------------VKAFDHEEKCQ----VAIKIIKN--KKPFLNQAQIEVQL 159
           LG+G FG+V             K F  +        VA+K+++    K   N    E+++
Sbjct: 13  LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKI 72

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFE----------LLSYNLYNLIRNTNFHGV 209
           + ++   +I     ++L       + LC++ E          L  +         +   +
Sbjct: 73  MSRLKDPNI-----IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTI 127

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT 269
           S +     A Q+   + +LSS  L+ +H DL   N L+   K   IKI DFG S ++   
Sbjct: 128 SYSTLIFMATQIASGMKYLSS--LNFVHRDLATRNCLV--GKNYTIKIADFGMSRNLYSG 183

Query: 270 LYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y  IQ R      + S E +L   +  A D+W+ G  L E+ T
Sbjct: 184 DYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 24/231 (10%)

Query: 117 LLGKGSFGQVVKAF---DHEE-KCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHSR 171
           +LG G+FG V K     D E  K  VAIK+++ N  P  N+  ++    E    A + S 
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD----EAYVMAGVGSP 69

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           Y+ +L G     + + LV +L+ Y  L + +R       S +L   +  Q+   +++L  
Sbjct: 70  YVCRLLG-ICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLN-WCVQIAKGMSYLE- 126

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRY---YRSPEVL 285
            E+ ++H DL   N+L+ SP    +KI DFG +    + +T Y     +    + + E +
Sbjct: 127 -EVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 183

Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPP 333
           L   +    D+WS G  + EL T G   + G    E+  + +  E L  PP
Sbjct: 184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 234

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 52/238 (21%)

Query: 117 LLGKGSFGQVVKA------FDHEEKCQVAIK------IIKNKKPFLNQAQIEVQLLEKIN 164
            LG G+FG+V +              +VA+K        + KK FL +A     L+   N
Sbjct: 2   FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAH----LMSNFN 57

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFE------LLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             +I     VKL G         ++ E      LLSY      R   F    L L +   
Sbjct: 58  HPNI-----VKLLGVCLLNEPQYIIMELMEGGDLLSY--LRDARVERFGPPLLTLKELLD 110

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQ 275
             L  A   +   ++  IH DL   N L+      A   +KI DFG    + + +Y+   
Sbjct: 111 ICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG----LARDIYK--- 163

Query: 276 SRYYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVD 320
           S YYR            +PE LL   +    D+WS G ++ E+ T G+  +   N  +
Sbjct: 164 SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE 221

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 24/173 (13%)

Query: 117 LLGKGSFGQV--VKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSR 171
           ++GKG+FG+V  V+  D   K      ++K+   KK  L   + E  +L     A+  S 
Sbjct: 8   VIGKGAFGEVRLVQKKD-TGKIYAMKTLLKSEMFKKDQLAHVKAERDVL-----AESDSP 61

Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
           ++V L   F    +L L+ E L     +  LI+   F   S ++T+ +  +  C LA  +
Sbjct: 62  WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTF---SEDVTRFYMAE--CVLAIEA 116

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSP 282
             +L  IH D+KP+NIL+   +   IK+ DFG S       ++   S YY+  
Sbjct: 117 VHKLGFIHRDIKPDNILI--DRGGHIKLSDFGLS----TGFHKQHDSAYYQKL 163

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRSPEVLLGIP 289
           ++H DLK  NI L       IK+ DFG S     ++   + S      YY +PE+     
Sbjct: 190 MMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKR 247

Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           Y    DMWSLG IL EL T    F G ++ + M +++
Sbjct: 248 YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL 284

Length = 478

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
           A+       L  +H   K  NILL       +     GS         Q     Y+ +PE
Sbjct: 21  AVCLQCLGALRELHRQAKSGNILLTWDGLLKL----DGSVAFKTPE--QSRPDPYFMAPE 74

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           V+ G  Y    D++SLG  L E    E  ++ + E+  + +I+ + GMP 
Sbjct: 75  VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEIL-LNGMPA 123

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 44.2 bits (104), Expect = 6e-05
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 39/233 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKNKKPFLNQAQI--EVQLL 160
           D+  +   LG+G FGQVV A     D +   E   VA+K++K+     + + +  E++++
Sbjct: 15  DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 74

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTK-- 215
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  S ++ +  
Sbjct: 75  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVP 130

Query: 216 ----KFAQQLCC------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
                F   + C       + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 131 DEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 186

Query: 266 VGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           V    Y    +       + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 187 VNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 26/205 (12%)

Query: 114 IDTLLGKGSFGQV-VKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADI 168
           +D  LG+G FG+V +  ++   K  VAIK +K      + FL +AQI    ++K+    +
Sbjct: 10  LDVKLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQI----MKKLRHDKL 63

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              Y V        +  + +V E +   +L + ++  +   + L      A Q+   +A+
Sbjct: 64  VPLYAV------VSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY 117

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPE 283
           +    ++ IH DL+  NIL+        KI DFG +  +    Y   Q   +     +PE
Sbjct: 118 IE--RMNYIHRDLRAANILVG--DNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE 173

Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
             L   + +  D+WS G +L EL T
Sbjct: 174 AALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 4/100 (4%)

Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
             K++A ++  AL  L      I+  DL P NILL    R  I++  F     V  +   
Sbjct: 86  CVKRWAAEMVVALDALH--REGIVCRDLNPNNILL--DDRGHIQLTYFSRWSEVEDSCDG 141

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL 312
                 Y +PEV        A D WSLG IL EL TG+ L
Sbjct: 142 EAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTL 181

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.8 bits (103), Expect = 8e-05
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 25/225 (11%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG+V          +VA+K +K    + + FL +AQI    ++K+    +   Y 
Sbjct: 14  LGNGQFGEVWMGT-WNGNTKVAVKTLKPGTMSPESFLEEAQI----MKKLRHDKLVQLYA 68

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V        +  + +V E +S  +L + +++     + L      A Q+   +A++    
Sbjct: 69  V------VSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE--R 120

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPEVLLGI 288
           ++ IH DL+  NIL+        KI DFG +  +    Y   Q   +     +PE  L  
Sbjct: 121 MNYIHRDLRSANILVGD--GLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 178

Query: 289 PYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
            + +  D+WS G +L EL T G   + G N  + + ++     MP
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 223

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 44.0 bits (104), Expect = 8e-05
 Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 46/218 (21%)

Query: 118 LGKGSFGQV----VKAFDHEE-KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG G+FG+V     +  D +  + QVA+K +    P     Q E   L    +A I S++
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTL----PESCSEQDESDFL---MEALIMSKF 66

Query: 173 ----IVKLKGHFTWKNHLCLVFELLS-YNLYNLIR-NTNFHGVSLNLTKKFAQQLCCALA 226
               IV+L G    +    ++ EL++  +L + +R N        +LT K        +A
Sbjct: 67  NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126

Query: 227 ----FLSSPELSIIHCDLKPENILLCS--PKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
               +L   E   IH D+   N LL    P R A KI DFG +    + +Y   ++ YYR
Sbjct: 127 KGCKYLE--ENHFIHRDIAARNCLLTCKGPGRVA-KIADFGMA----RDIY---RASYYR 176

Query: 281 S------------PEVLLGIPYDLAIDMWSLGCILVEL 306
                        PE  L   +    D+WS G +L E+
Sbjct: 177 KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 22/224 (9%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ-LLEKIN--KADIHSRYIV 174
           LG G FG+V   + +    +VA+K +K          + VQ  LE+ N  K   H + +V
Sbjct: 14  LGAGQFGEVWMGYYNNST-KVAVKTLK-------PGTMSVQAFLEEANLMKTLQHDK-LV 64

Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           +L    T +  + ++ E ++  +L + +++     V L     F+ Q+   +A++     
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-- 122

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPEVLLGIP 289
           + IH DL+  N+L+   +    KI DFG +  +    Y   +   +     +PE +    
Sbjct: 123 NYIHRDLRAANVLV--SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 180

Query: 290 YDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
           + +  D+WS G +L E+ T G+  + G +  D M+ +     MP
Sbjct: 181 FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP 224

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 28/201 (13%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSR 171
           +G+G+FG+V       +   VA+K  +   P      FL +A+I    L++ +  +    
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARI----LKQYSHPN---- 54

Query: 172 YIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            IV+L G  T K  + +V EL+   +    +R      + +    +  +     + +L S
Sbjct: 55  -IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPR-LKVKELIQMVENAAAGMEYLES 112

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY------QYIQSRYYRSPEV 284
                IH DL   N L+   +++ +KI DFG S      +Y      + I  + + +PE 
Sbjct: 113 K--HCIHRDLAARNCLVT--EKNVLKISDFGMSREEEDGVYASTGGMKQIPVK-WTAPEA 167

Query: 285 LLGIPYDLAIDMWSLGCILVE 305
           L    Y    D+WS G +L E
Sbjct: 168 LNYGRYSSESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 45/225 (20%)

Query: 118 LGKGSFGQV---------------VKAFDHEEKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           LG+G FG+V                  FD +    VA+K+++    K   N    E++++
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQ-PVLVAVKMLRADVTKTARNDFLKEIKIM 71

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNL------IRNT-----NFHGV 209
            ++   +I     ++L G     + LC++ E +     N       I +T     N   V
Sbjct: 72  SRLKNPNI-----IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSV 126

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT 269
           S+      A Q+   + +L+S  L+ +H DL   N L+       IKI DFG S ++   
Sbjct: 127 SIANLLYMAVQIASGMKYLAS--LNFVHRDLATRNCLV--GNHYTIKIADFGMSRNLYSG 182

Query: 270 LYQYIQS------RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y  IQ       R+     +LLG  +  A D+W+ G  L E+ T
Sbjct: 183 DYYRIQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 41/234 (17%)

Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKN--KKPFLNQAQIEVQLL 160
           DR  +   LG+G FGQVV A     D E+     +VA+K++K+   +  L+    E++++
Sbjct: 18  DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 77

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL-------- 211
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+          
Sbjct: 78  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVP 133

Query: 212 --NLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              L+ K     A Q+   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 134 EEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 189

Query: 266 VGQTLYQYIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y Y ++   R      +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 190 IHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 38/216 (17%)

Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKII------KNKKPFLNQAQIEVQLLEKINKA 166
           LG+GSFG V +         E + +VAIK +      + +  FLN+A +           
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV---------MK 64

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN-----TNFHGVSLNLTKKFAQ- 219
           + +  ++V+L G  +      ++ EL++  +L + +R+      N    +    KK  Q 
Sbjct: 65  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQM 124

Query: 220 --QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
             ++   +A+L++ +   +H DL   N ++   +   +KI DFG +  + +T Y     +
Sbjct: 125 AGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGK 180

Query: 278 -----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 + SPE L    +    D+WS G +L E+ T
Sbjct: 181 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 22/199 (11%)

Query: 118 LGKGSFGQVVKAFDHEEKCQ--VAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G+FG V K      K Q  VAIK++K  N+K   ++   E +++ +++       YI
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNP-----YI 57

Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V++ G    +  L LV E+ S    N   +     ++++   +   Q+   + +L     
Sbjct: 58  VRMIGVCEAEA-LMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE--GK 114

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-------YRSPEVLL 286
           + +H DL   N+LL +  +   KI DFG S  +G     Y ++R        + +PE + 
Sbjct: 115 NFVHRDLAARNVLLVN--QHYAKISDFGLSKALGAD-DSYYKARSAGKWPLKWYAPECIN 171

Query: 287 GIPYDLAIDMWSLGCILVE 305
              +    D+WS G  + E
Sbjct: 172 FRKFSSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 43/210 (20%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG+V          +VA+K +K    + + FL +AQI  +L         H + +
Sbjct: 14  LGAGQFGEVWMGT-WNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR--------HDK-L 63

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSS 230
           V+L    + +  + +V E +S  +L + +++    G  L L +    A Q+   +A+L S
Sbjct: 64  VQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLES 121

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----------- 279
                IH DL   NIL+   +    KI DFG        L + I+   Y           
Sbjct: 122 RNY--IHRDLAARNILV--GENLVCKIADFG--------LARLIEDDEYTAREGAKFPIK 169

Query: 280 -RSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             +PE      + +  D+WS G +L E+ T
Sbjct: 170 WTAPEAANYGRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 52/251 (20%)

Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
           LG+G+FG+V  A  +     ++K  VA+K +K+     +K F    Q E +LL      +
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF----QREAELL-----TN 63

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-----------------V 209
           +   +IVK  G     + L +VFE + + +L   +R    HG                 +
Sbjct: 64  LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA---HGPDAMILVDGQPRQAKGEL 120

Query: 210 SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT 269
            L+     A Q+   + +L+S     +H DL   N L+ +     +KI DFG S  V  T
Sbjct: 121 GLSQMLHIASQIASGMVYLASQHF--VHRDLATRNCLVGA--NLLVKIGDFGMSRDVYST 176

Query: 270 LYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFS-GKNEVDQ 321
            Y  +         +  PE ++   +    D+WS G IL E+ T   +P F     EV +
Sbjct: 177 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236

Query: 322 MTKIIEVLGMP 332
                 VL  P
Sbjct: 237 CITQGRVLERP 247

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 39/221 (17%)

Query: 118 LGKGSFGQVVKA----FDHEEKCQ---VAIKIIKNKKPFLNQAQI--EVQLLEKINKADI 168
           LG+G FGQVV A     D ++  +   VA+K++K+     + + +  E+++++ I K   
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGK--- 76

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKFAQQLCC-- 223
             + I+ L G  T    L ++ E  S  NL   +R     G+  S +  K   +QL    
Sbjct: 77  -HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135

Query: 224 ----------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
                      + +L+S +   IH DL   N+L+   + + +KI DFG +  V    Y Y
Sbjct: 136 LVSCAYQVARGMEYLASQK--CIHRDLAARNVLVT--EDNVMKIADFGLARDVHNIDY-Y 190

Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            ++   R      +PE L    Y    D+WS G +L E+ T
Sbjct: 191 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 30/221 (13%)

Query: 117 LLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +LGKG FG V +A    +     +VA+K++K      + + IE  L E     +     +
Sbjct: 6   MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKAD--IFSSSDIEEFLREAACMKEFDHPNV 63

Query: 174 VKLKG---HFTWKNHL-----CLVF----ELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           +KL G       K  L      L F    +L ++ L + I    F  + L    +F   +
Sbjct: 64  IKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT-LPLQTLVRFMIDI 122

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS 281
              + +LSS   + IH DL   N +L   +   + + DFG S  +    Y Y Q    + 
Sbjct: 123 ASGMEYLSSK--NFIHRDLAARNCML--NENMTVCVADFGLSKKIYSGDY-YRQGCASKL 177

Query: 282 P------EVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG 315
           P      E L    Y    D+W+ G  + E+ T G+  ++G
Sbjct: 178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAG 218

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 24/200 (12%)

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG+V   + +    +VAIK +K    + + FL +A +  QL         H R +
Sbjct: 14  LGAGQFGEVWMGY-YNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ--------HPR-L 63

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L    T +  + ++ E +   +L + ++      +++N     A Q+   +AF+    
Sbjct: 64  VRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE--R 120

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPEVLLGI 288
            + IH DL+  NIL+   +    KI DFG +  +    Y   +   +     +PE +   
Sbjct: 121 KNYIHRDLRAANILV--SETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 178

Query: 289 PYDLAIDMWSLGCILVELHT 308
            + +  D+WS G +L E+ T
Sbjct: 179 TFTIKSDVWSFGILLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 17/207 (8%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +E+   +G G++G V KA +       AIK+IK +          V   E I   D    
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHS 66

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
            IV   G +  ++ L +  E     +L ++   T    +S +     +++    L +L S
Sbjct: 67  NIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHS 124

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL- 286
                +H D+K  NILL       +K+ DFG S  +  T+ +   +I + Y+ +PEV   
Sbjct: 125 K--GKMHRDIKGANILLTD--NGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAV 180

Query: 287 --GIPYDLAIDMWSLGCILVELHTGEP 311
                Y+   D+W++G   +EL   +P
Sbjct: 181 ERKGGYNQLCDIWAVGITAIELAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADI 168
           +++  LG G FG+V  A  + +  +VA+K +K    + + FL +A +         K   
Sbjct: 9   KLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLAEANVM--------KTLQ 59

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           H + +VKL    T K  + ++ E ++  +L + +++       L     F+ Q+   +AF
Sbjct: 60  HDK-LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 117

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY----RSPE 283
           +   + + IH DL+  NIL+        KI DFG +  +    Y   +   +     +PE
Sbjct: 118 IE--QRNYIHRDLRAANILV--SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 173

Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
            +    + +  D+WS G +L+E+ T
Sbjct: 174 AINFGSFTIKSDVWSFGILLMEIVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)

Query: 117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRY 172
           ++G+G+FGQV+KA   ++  +   AIK +K      +      E+++L K+     H   
Sbjct: 14  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPN 69

Query: 173 IVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF----------HGVSLNLTKK----F 217
           I+ L G    + +L L  E   + NL + +R +            +  +  L+ +    F
Sbjct: 70  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 129

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A  +   + +LS  +   IH DL   NIL+   +    KI DFG S   GQ +  Y++  
Sbjct: 130 AADVARGMDYLSQKQF--IHRDLAARNILV--GENYVAKIADFGLS--RGQEV--YVKKT 181

Query: 278 YYRSPEVLLGIP------YDLAIDMWSLGCILVEL 306
             R P   + I       Y    D+WS G +L E+
Sbjct: 182 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 216

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           Y +PE+LLG P+  A+D W+LG  L E  TG P F
Sbjct: 546 YLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPF 580

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A Q+   + +LSS  L+ +H DL   N L+   +   IKI DFG S ++    Y  IQ R
Sbjct: 144 ALQIASGMKYLSS--LNFVHRDLATRNCLV--GENLTIKIADFGMSRNLYAGDYYRIQGR 199

Query: 278 -----YYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
                 + + E +L   +  A D+W+ G  L E+
Sbjct: 200 AVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.1 bits (91), Expect = 0.004
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 120 KGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH 179
           +G+FG+V            A+K++K K   +N+  +     E+   A   S +IV L   
Sbjct: 14  RGAFGKVYLGRKKNNSKLYAVKVVK-KADMINKNMVHQVQAERDALALSKSPFIVHLYYS 72

Query: 180 FTWKNHLCLVFE-LLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHC 238
               N++ LV E L+  ++ +L+    +    + +  K+  ++  AL +L      IIH 
Sbjct: 73  LQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAV--KYISEVALALDYLH--RHGIIHR 128

Query: 239 DLKPENILLCSPKRSAIKIIDFGSS 263
           DLKP+N+L+ +     IK+ DFG S
Sbjct: 129 DLKPDNMLISN--EGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 26/237 (10%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEE----KCQVAIKIIKN-KKPFLNQAQIEVQLLEKINKA 166
           ++   +LG G+FG V K     E    K  VAIK ++    P  N+  ++    E    A
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMA 64

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            + + ++ +L G     + + L+ +L+ +  L + +R    +  S  L   +  Q+   +
Sbjct: 65  SVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGM 122

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSP--- 282
            +L   E  ++H DL   N+L+ +P+   +KI DFG +  +G    +Y  +   + P   
Sbjct: 123 NYLE--ERRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGADEKEY-HAEGGKVPIKW 177

Query: 283 ---EVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPP 333
              E +L   Y    D+WS G  + EL T G   + G   +E+  + +  E L  PP
Sbjct: 178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 234

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	437
KOG0667|consensus	586		100.0
KOG0605|consensus	550		100.0
KOG0615|consensus	475		100.0
KOG0661|consensus	538		100.0
KOG0575|consensus	592		100.0
KOG0671|consensus	415		100.0
KOG0593|consensus	396		100.0
KOG0598|consensus	357		100.0
KOG0659|consensus	318		100.0
KOG0581|consensus	364		100.0
KOG0592|consensus	604		100.0
KOG0600|consensus	560		100.0
KOG0663|consensus	419		100.0
KOG0616|consensus	355		100.0
KOG0658|consensus	364		100.0
KOG0660|consensus	359		100.0
KOG1290|consensus	590		100.0
KOG0594|consensus	323		100.0
KOG0583|consensus	370		100.0
KOG0588|consensus	786		100.0
KOG0595|consensus	429		100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0694|consensus	694		100.0
KOG0670|consensus	752		100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0033|consensus	355		100.0
KOG0032|consensus	382		100.0
KOG0597|consensus	808		100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0580|consensus	281		100.0
KOG0610|consensus	459		100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0591|consensus	375		100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0198|consensus	313		100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0599|consensus	411		100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0578|consensus	550		100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0585|consensus	576		100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0582|consensus	516		100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG4717|consensus	864		100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0662|consensus	292		100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0611|consensus	668		100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG0201|consensus	467		100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0612|consensus	1317		100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0666|consensus	438		100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0604|consensus	400		100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
KOG0192|consensus	362		100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0690|consensus	516		100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG0589|consensus	426		100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0197|consensus	468		100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG0579|consensus	1187		100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0986|consensus	591		100.0
KOG0596|consensus	677		100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG0574|consensus	502		100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
KOG0607|consensus	463		100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
KOG4236|consensus	888		100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG1187|consensus	361		100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
KOG1989|consensus	738		100.0
KOG0577|consensus	948		100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0983|consensus	391		100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
KOG0665|consensus	369		100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG0696|consensus	683		100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0669|consensus	376		100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0608|consensus	1034		100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
KOG0584|consensus	632		100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0586|consensus	596		100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0603|consensus	612		100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG0193|consensus	678		100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
KOG4279|consensus	1226		100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
KOG2345|consensus	302		100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
KOG0668|consensus	338		100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG4721|consensus	904		100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
KOG4645|consensus	1509		100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG1035|consensus	1351		100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG0614|consensus	732		100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0587|consensus	953		100.0
KOG1026|consensus	774		100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0695|consensus	593		100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
KOG1095|consensus	1025		100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG1151|consensus	775		100.0
KOG0194|consensus	474		100.0
KOG0664|consensus	449		100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG4250|consensus	732		100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1006|consensus	361		100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG1027|consensus	903		100.0
KOG1167|consensus	418		100.0
KOG0196|consensus	996		100.0
KOG4278|consensus	1157		100.0
KOG4257|consensus	974		100.0
KOG0199|consensus	1039		100.0
KOG1094|consensus	807		100.0
KOG0984|consensus	282		100.0
KOG1152|consensus	772		100.0
KOG3653|consensus	534		99.98
KOG0200|consensus	609		99.97
KOG0576|consensus	829		99.97
KOG2052|consensus	513		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG1345|consensus	378		99.97
KOG1025|consensus	1177		99.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
KOG1024|consensus	563		99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
KOG1163|consensus	341		99.94
KOG1164|consensus	322		99.94
KOG0590|consensus	601		99.93
KOG1165|consensus	449		99.93
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.92
KOG0603|consensus	612		99.92
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
KOG0606|consensus	1205		99.89
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.87
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.87
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.87
KOG1240|consensus	1431		99.86
KOG4158|consensus	598		99.85
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.84
KOG1166|consensus	974		99.84
PRK12274	218	serine/threonine protein kinase; Provisional	99.83
PRK10345	210	hypothetical protein; Provisional	99.82
KOG1033|consensus	516		99.79
smart00090	237	RIO RIO-like kinase.	99.79
KOG0195|consensus	448		99.76
PRK14879	211	serine/threonine protein kinase; Provisional	99.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.71
KOG0590|consensus	601		99.71
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.69
KOG1023|consensus	484		99.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.67
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.65
KOG0601|consensus	524		99.58
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.56
KOG0606|consensus	1205		99.56
KOG1266|consensus	458		99.53
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.42
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.41
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.39
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.34
KOG0601|consensus	524		99.31
KOG1243|consensus	690		99.3
KOG3087|consensus	229		99.26
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.17
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.15
KOG2137|consensus	700		99.05
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.0
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.98
KOG3741|consensus	655		98.92
PRK09902	216	hypothetical protein; Provisional	98.77
COG4248	637	Uncharacterized protein with protein kinase and he	98.69
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.66
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.63
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.58
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.54
KOG0576|consensus	829		98.43
PF01636	239	APH: Phosphotransferase enzyme family This family	98.43
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.39
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.36
KOG1235|consensus	538		98.28
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.24
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.08
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.04
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.03
PLN02876	822	acyl-CoA dehydrogenase	97.95
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.88
KOG2270|consensus	520		97.78
PRK05231	319	homoserine kinase; Provisional	97.74
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.72
PRK10593	297	hypothetical protein; Provisional	97.69
KOG1035|consensus	1351		97.59
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.59
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.59
KOG1093|consensus	725		97.55
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.52
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.47
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.43
KOG2268|consensus	465		97.19
PLN02236	344	choline kinase	97.12
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.07
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.87
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.85
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.77
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.74
PRK11768	325	serine/threonine protein kinase; Provisional	96.61
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.39
KOG1826|consensus	2724		96.23
COG2334	331	Putative homoserine kinase type II (protein kinase	96.22
PRK12396	409	5-methylribose kinase; Reviewed	95.98
PRK06148	1013	hypothetical protein; Provisional	95.97
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.89
KOG1236|consensus	565		95.87
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.84
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.76
PTZ00384	383	choline kinase; Provisional	95.54
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.35
PLN02756	418	S-methyl-5-thioribose kinase	95.11
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.05
PTZ00296	442	choline kinase; Provisional	94.8

>KOG0667|consensus

Probab=100.00  E-value=1.2e-73  Score=569.26  Aligned_cols=393  Identities=50%  Similarity=0.779  Sum_probs=337.5

Q ss_pred             CCcccCCCCCChhhHhhHHHHHHhchhcHHHHHhhhhhhhhcccccccccccccccCCCCCCCCCCcceeecCceeccCe
Q psy11727         33 IPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRY  112 (437)
Q Consensus        33 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  112 (437)
                      ....+|.....|+...+.++..+|+.++..++.....+.+........      .....+.++++.+|.+..++.+..+|
T Consensus       115 ~~~~~~~~~~~~~~~~~~s~~e~~ei~~~~~~~~~~~~~~~~~t~~~~------~~~~~~~~~~~~dY~~v~~d~i~~rY  188 (586)
T KOG0667|consen  115 ENSGLRPSQASPLYKHSLSLIETYEIINYPEVYFVGLNAKKVLTFPSE------GINTKNFDDEDGDYQLVVNDHIAYRY  188 (586)
T ss_pred             cccCcCchhhhhhhccccchhhhhhccChHHhhhhccccccccCCCcc------cccCCCCCCCCCceeEEecceeEEEE
Confidence            344677888889999999999999998876654433332211111111      12223377888899999999999999


Q ss_pred             eeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC-cEEEecceeeECCEEEEEEE
Q psy11727        113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-YIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~-~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +|.+.||+|+||+|.+|.+..|++.||||++++++.+..+...|+.+++.++..+..+. |+|+++++|...+|+|||+|
T Consensus       189 ~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfE  268 (586)
T KOG0667|consen  189 EVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFE  268 (586)
T ss_pred             EEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeeh
Confidence            99999999999999999999999999999999999999999999999999995544444 99999999999999999999


Q ss_pred             eccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccc
Q psy11727        192 LLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY  271 (437)
Q Consensus       192 ~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~  271 (437)
                      +++.+|+++++.+++.++++..++.|+.||+.||.+||  ++||||||||||||||++..+..|||+|||+||..++..+
T Consensus       269 LL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~--~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy  346 (586)
T KOG0667|consen  269 LLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH--ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY  346 (586)
T ss_pred             hhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence            99999999999999999999999999999999999999  5699999999999999988889999999999999999999


Q ss_pred             cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccC
Q psy11727        272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS  351 (437)
Q Consensus       272 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  351 (437)
                      ++++|++|+|||++.|.+|+.++||||||||++||++|.|+|.|.++.+++..|++.+|+||.+|++.+.++.+||+.. 
T Consensus       347 tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~-  425 (586)
T KOG0667|consen  347 TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSL-  425 (586)
T ss_pred             eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhcc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             CCcceeccc-cccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        352 DNSYVLKKS-TDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       352 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      .+.+..... ........+..+..-.....+.++|.+.+.....+...++..|.|||.+||++||.+||||.|||+||||
T Consensus       426 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl  505 (586)
T KOG0667|consen  426 KGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFL  505 (586)
T ss_pred             CCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccc
Confidence            222221111 1122224444555555566677788777888888888899999999999999999999999999999999


Q ss_pred             CcCC
Q psy11727        431 LKHS  434 (437)
Q Consensus       431 ~~~~  434 (437)
                      ++..
T Consensus       506 ~~~~  509 (586)
T KOG0667|consen  506 TGTS  509 (586)
T ss_pred             cccc
Confidence            9654

>KOG0605|consensus

Probab=100.00  E-value=6.4e-56  Score=431.67  Aligned_cols=265  Identities=31%  Similarity=0.507  Sum_probs=220.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ..-.++|+++++||+|+||.||+|+.+.||..+|+|++++ +.....-+.+....|+-.....++++||+|+..|++.++
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkK-S~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~  215 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKK-SEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY  215 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccH-HHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence            4447899999999999999999999999999999999974 444444444555555544455689999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +||||||++| ++..+|....  .++++.++.++.+++.|+..||  ++|+|||||||+|+||  |..|+|||+|||+|.
T Consensus       216 LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH--~~gyIHRDIKPdNlLi--D~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  216 LYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIH--QLGYIHRDIKPDNLLI--DAKGHIKLSDFGLST  289 (550)
T ss_pred             eEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHH--HcCcccccCChhheee--cCCCCEeeccccccc
Confidence            9999999976 6777777664  5999999999999999999999  5699999999999999  899999999999973


Q ss_pred             ecCC--------------------------------------------------ccccccccccccChhhhcCCCCCCcc
Q psy11727        265 HVGQ--------------------------------------------------TLYQYIQSRYYRSPEVLLGIPYDLAI  294 (437)
Q Consensus       265 ~~~~--------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~  294 (437)
                      -...                                                  -.++.+|||.|+|||++.+.+|+..+
T Consensus       290 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~c  369 (550)
T KOG0605|consen  290 GLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKEC  369 (550)
T ss_pred             hhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccc
Confidence            2200                                                  02345899999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCch
Q psy11727        295 DMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL  374 (437)
Q Consensus       295 DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (437)
                      |+||||||+||||.|.|||.+.+..++..+|+.....            -.|....                      .+
T Consensus       370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~------------l~fP~~~----------------------~~  415 (550)
T KOG0605|consen  370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET------------LKFPEEV----------------------DL  415 (550)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh------------ccCCCcC----------------------cc
Confidence            9999999999999999999999999999999763110            0000000                      00


Q ss_pred             hhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---HHHHhcCCCcCcCCCCC
Q psy11727        375 DTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---PTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---~~e~l~Hp~~~~~~~~~  437 (437)
                                               ..+..|||.+||. ||+.|.-   ++|+-+||||+.+.+|+
T Consensus       416 -------------------------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~  455 (550)
T KOG0605|consen  416 -------------------------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDH  455 (550)
T ss_pred             -------------------------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcch
Confidence                                     0256899999999 9999995   99999999999999874

>KOG0615|consensus

Probab=100.00  E-value=2.6e-56  Score=421.43  Aligned_cols=261  Identities=32%  Similarity=0.469  Sum_probs=215.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc--------chHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--------LNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--------~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      +.+.+.|.+.+.||+|+||.|-+|+.+.||+.||||++.+....        .....+|+.+|+++     .||+||+++
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-----~HP~IV~~~  242 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-----SHPNIVRIK  242 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-----CCCCEEEEe
Confidence            34677899999999999999999999999999999999754321        22356899999988     789999999


Q ss_pred             ceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCE
Q psy11727        178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAI  255 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~i  255 (437)
                      ++|...++.||||||++| .|++.+..+.  .+.+...+-+++||+.|+.|||+  .||+||||||+|||+.++ ++..+
T Consensus       243 d~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~--~GI~HRDiKPeNILl~~~~e~~ll  318 (475)
T KOG0615|consen  243 DFFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS--QGIIHRDIKPENILLSNDAEDCLL  318 (475)
T ss_pred             eeeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH--cCcccccCCcceEEeccCCcceEE
Confidence            999999999999999955 8999887764  47889999999999999999995  599999999999999766 55779


Q ss_pred             EEEeCCCceecC--CccccccccccccChhhhcCCCCC---CcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Q psy11727        256 KIIDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYD---LAIDMWSLGCILVELHTGEPLFSGKNEVD-QMTKIIEVL  329 (437)
Q Consensus       256 kL~DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~  329 (437)
                      ||+|||+|+..+  .-+.+.|||+.|.|||++.++.+.   .++|+|||||+||.+++|.|||++..... ..++|..+ 
T Consensus       319 KItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G-  397 (475)
T KOG0615|consen  319 KITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG-  397 (475)
T ss_pred             EecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC-
Confidence            999999999884  456689999999999999877533   47899999999999999999999876555 45555432 


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                                              .|.+..                                  -.|-...++.+|||.+
T Consensus       398 ------------------------~y~f~p----------------------------------~~w~~Iseea~dlI~~  419 (475)
T KOG0615|consen  398 ------------------------RYAFGP----------------------------------LQWDRISEEALDLINW  419 (475)
T ss_pred             ------------------------cccccC----------------------------------hhhhhhhHHHHHHHHH
Confidence                                    111100                                  0111112256899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ||..||+.|||+.|||+||||+...
T Consensus       420 mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  420 MLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhEeCcccCcCHHHHhcChhhhccc
Confidence            9999999999999999999998543

>KOG0661|consensus

Probab=100.00  E-value=6.2e-56  Score=425.46  Aligned_cols=286  Identities=35%  Similarity=0.533  Sum_probs=235.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHH--HHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~--~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|.+++.||.|+||.||+|+.+.++..||||.++++-...++.  .+|+..+++++    .|||||++.+++.+.+
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln----~hpniikL~Evi~d~~   82 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN----PHPNIIKLKEVIRDND   82 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC----CCCcchhhHHHhhccC
Confidence            35789999999999999999999999999999999998665444443  35777777774    4899999999999988


Q ss_pred             -EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 -HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 -~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                       .+++|||||..+|+++++.. ...|++..++.|++||++||+|+|.+  |+.||||||||||+  ..+..|||+|||+|
T Consensus        83 ~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~--GfFHRDlKPENiLi--~~~~~iKiaDFGLA  157 (538)
T KOG0661|consen   83 RILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH--GFFHRDLKPENILI--SGNDVIKIADFGLA  157 (538)
T ss_pred             ceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc--CcccccCChhheEe--cccceeEecccccc
Confidence             99999999999999999988 47799999999999999999999965  89999999999999  44677999999999


Q ss_pred             eecC--CccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVG--QTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      +...  .+.+.++.|++|+|||++.. .-|+.+.|||++|||++|+.+-+|+|.|.++.+++.+|.+.+|.|....+..+
T Consensus       158 Rev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg  237 (538)
T KOG0661|consen  158 REVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG  237 (538)
T ss_pred             cccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence            8773  44567899999999999875 56899999999999999999999999999999999999999999987766554


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      .....-      -.|.+...         ....+.+.+..                  ...++.+||.+||.|||.+|||
T Consensus       238 ~~La~~------mnf~~P~~---------~~~~l~~L~p~------------------~s~~~~~li~~ll~WDP~kRpT  284 (538)
T KOG0661|consen  238 YNLASA------MNFRFPQV---------KPSPLKDLLPN------------------ASSEAASLIERLLAWDPDKRPT  284 (538)
T ss_pred             HHHHHH------hccCCCcC---------CCCChHHhCcc------------------cCHHHHHHHHHHhcCCCccCcc
Confidence            221110      01111100         00112222111                  1236789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      |+|+|+||||+...
T Consensus       285 A~~al~~pffq~~~  298 (538)
T KOG0661|consen  285 ASQALQHPFFQVGR  298 (538)
T ss_pred             HHHHhcCccccccc
Confidence            99999999998754

>KOG0575|consensus

Probab=100.00  E-value=1.8e-54  Score=427.66  Aligned_cols=249  Identities=30%  Similarity=0.439  Sum_probs=218.2

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecC----CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN----KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~----~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+|...+.||+|||+.||.+++..+|+.||+|++.+    +.........|+.|.+.+     .|||||+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-----~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-----KHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-----CCCcEEeeeeEeecCCc
Confidence            579999999999999999999999999999999975    333345566677776665     89999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|||.|+|.. +|..+++.  .+.+++..++.|++||+.||.|||++  +|||||||..|+||  +++.+|||+|||+|+
T Consensus        93 VYivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~--~IiHRDLKLGNlfL--~~~~~VKIgDFGLAt  166 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL--GIIHRDLKLGNLFL--NENMNVKIGDFGLAT  166 (592)
T ss_pred             eEEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc--Cceecccchhheee--cCcCcEEecccceee
Confidence            9999999976 66666663  36799999999999999999999965  79999999999999  788899999999998


Q ss_pred             ecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   +...+.|||+.|+|||++....++..+||||+||+||.||+|+|||..++-.+++.+|...--..|....    
T Consensus       167 ~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls----  242 (592)
T KOG0575|consen  167 QLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLS----  242 (592)
T ss_pred             eecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccC----
Confidence            875   6678899999999999999999999999999999999999999999999999999999774332222111    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                                 ...+|||.+||+.||.+|||+
T Consensus       243 -----------------------------------------------------------~~A~dLI~~lL~~~P~~Rpsl  263 (592)
T KOG0575|consen  243 -----------------------------------------------------------AEAKDLIRKLLRPNPSERPSL  263 (592)
T ss_pred             -----------------------------------------------------------HHHHHHHHHHhcCCcccCCCH
Confidence                                                                       145899999999999999999


Q ss_pred             HHHhcCCCcCc
Q psy11727        422 TNVLRHEFFLK  432 (437)
Q Consensus       422 ~e~l~Hp~~~~  432 (437)
                      +++|.|+||+.
T Consensus       264 ~~vL~h~Ff~~  274 (592)
T KOG0575|consen  264 DEVLDHPFFKS  274 (592)
T ss_pred             HHHhcCHhhhC
Confidence            99999999954

>KOG0671|consensus

Probab=100.00  E-value=3.9e-55  Score=410.30  Aligned_cols=322  Identities=36%  Similarity=0.659  Sum_probs=269.8

Q ss_pred             CCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC-c
Q psy11727         94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-Y  172 (437)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~-~  172 (437)
                      ++....+++..++.+.++|.+.+.+|+|.||.|..|.+..++..||||++++-.........|+.++++++..+.... .
T Consensus        73 dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~r  152 (415)
T KOG0671|consen   73 DDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFR  152 (415)
T ss_pred             CCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence            667778999999999999999999999999999999999999999999999888888889999999999988765544 6


Q ss_pred             EEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC--
Q psy11727        173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP--  250 (437)
Q Consensus       173 iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~--  250 (437)
                      +|++.++|...++.|||+|.++-++++++..+++.+++...++.|++|++.++++||  +++++|-||||+|||+++.  
T Consensus       153 cv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh--~~kl~HTDLKPENILfvss~~  230 (415)
T KOG0671|consen  153 CVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH--DLKLTHTDLKPENILFVSSEY  230 (415)
T ss_pred             EEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH--hcceeecCCChheEEEeccce
Confidence            999999999999999999999999999999999999999999999999999999999  4689999999999999643  


Q ss_pred             ----------------CCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        251 ----------------KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       251 ----------------~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                                      ++..|+|+|||+|+...+..++.+.|+.|+|||++.+.+++.++||||+||||+|+.||..+|.
T Consensus       231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq  310 (415)
T KOG0671|consen  231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ  310 (415)
T ss_pred             EEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence                            2346999999999999888888999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      +.++.+.++.+...+|++|..|+.... ..+||.+- .=.|.........++-...-..+..+.               .
T Consensus       311 tHen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~---------------~  373 (415)
T KOG0671|consen  311 THENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYM---------------L  373 (415)
T ss_pred             cCCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcc-cccCccccccccchhhhcCCccHHHHh---------------c
Confidence            999999998888889999999997765 34565542 111211111110011111111122211               1


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +...+...|.|||++||.+||.+|+|+.|||.||||+...
T Consensus       374 ~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  374 QDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             cCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            2223334689999999999999999999999999998754

>KOG0593|consensus

Probab=100.00  E-value=3.9e-54  Score=392.05  Aligned_cols=281  Identities=32%  Similarity=0.558  Sum_probs=228.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|+...++|+|+||.||+|+++.||+.||||++.....   ..+-+.+|+.+++.+     .|+|+|.++++|.....+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-----kH~NLVnLiEVFrrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-----KHENLVNLIEVFRRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHhccee
Confidence            578999999999999999999999999999999974432   234456788888777     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||+|||..++++.+.... ++++...++++++|++.|+.|+|++  ++|||||||+|||+  ..+|.+||||||+|+..
T Consensus        77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~--n~IHRDIKPENILi--t~~gvvKLCDFGFAR~L  151 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN--NCIHRDIKPENILI--TQNGVVKLCDFGFARTL  151 (396)
T ss_pred             EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc--CeecccCChhheEE--ecCCcEEeccchhhHhh
Confidence            9999999999888888765 6799999999999999999999986  59999999999999  67999999999999876


Q ss_pred             C---CccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 G---QTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .   +..+.++.|++|+|||.+.| ..|+.++|||++||++.||++|.|.|.|.++.+++-.|+..+|..++.-..-. .
T Consensus       152 ~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF-~  230 (396)
T KOG0593|consen  152 SAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF-S  230 (396)
T ss_pred             cCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh-c
Confidence            4   34456889999999999998 68999999999999999999999999999999999999999996554333211 1


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...||..+                .+|.....+..           +..-++.+    ..+.||+.+||..||++|+|.+
T Consensus       231 ~N~~F~Gv----------------~lP~~~~~epL-----------e~k~p~~s----~~~ld~~k~cL~~dP~~R~sc~  279 (396)
T KOG0593|consen  231 SNPFFHGV----------------RLPEPEHPEPL-----------ERKYPKIS----NVLLDLLKKCLKMDPDDRLSCE  279 (396)
T ss_pred             cCCceeee----------------ecCCCCCccch-----------hhhcccch----HHHHHHHHHHhcCCccccccHH
Confidence            22333321                11111111000           00011111    1568999999999999999999


Q ss_pred             HHhcCCCcCc
Q psy11727        423 NVLRHEFFLK  432 (437)
Q Consensus       423 e~l~Hp~~~~  432 (437)
                      |+|.||||.+
T Consensus       280 qll~H~yFd~  289 (396)
T KOG0593|consen  280 QLLHHPYFDG  289 (396)
T ss_pred             HHhcChHHHH
Confidence            9999999954

>KOG0598|consensus

Probab=100.00  E-value=8.6e-54  Score=401.37  Aligned_cols=254  Identities=35%  Similarity=0.578  Sum_probs=220.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.++||+|+||+|+.++.+.|++.+|+|+++++...    ......|..+++.+     +||.||+++..|++.+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-----~hPFiv~l~ysFQt~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-----KHPFIVKLIYSFQTEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-----CCCcEeeeEEecccCC
Confidence            57899999999999999999999999999999999754322    33455677777764     8999999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+|+||+.| .|+.+|.+..  .++++.++.++.+|+.||.|||+  .|||||||||+||||  |..|+|+|+|||++
T Consensus        99 kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~--~gIiyRDlKPENILL--d~~GHi~LtDFgL~  172 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHS--KGIIYRDLKPENILL--DEQGHIKLTDFGLC  172 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHeee--cCCCcEEEeccccc
Confidence            99999999965 7998888764  49999999999999999999995  489999999999999  88999999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChhhhcc
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL-GMPPGYLLHG  339 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~p~~~~~~~  339 (437)
                      +..   +....+.|||+.|||||++.+.+|+.++|+||||+++|||++|.+||.+.+...+.++|...- ..+|..+.  
T Consensus       173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls--  250 (357)
T KOG0598|consen  173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLS--  250 (357)
T ss_pred             hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCC--
Confidence            743   445567899999999999999999999999999999999999999999999989988887643 11111110  


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                   ...+|||.++|..||++|.
T Consensus       251 -------------------------------------------------------------~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  251 -------------------------------------------------------------EEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             -------------------------------------------------------------HHHHHHHHHHhccCHHHhc
Confidence                                                                         1468999999999999996


Q ss_pred             ----CHHHHhcCCCcCcCCCC
Q psy11727        420 ----SPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       420 ----t~~e~l~Hp~~~~~~~~  436 (437)
                          .+.++-.||||...+++
T Consensus       270 g~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  270 GGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             CCCCChHHhhcCcccccCCHH
Confidence                68889999999998875

>KOG0659|consensus

Probab=100.00  E-value=3e-53  Score=380.21  Aligned_cols=278  Identities=35%  Similarity=0.562  Sum_probs=235.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+|...+.||+|.||.||+|++..||+.||||.|+.....   .....+|+..++.+     +|+||+.++++|.+.+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-----~h~nIi~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-----KHPNIIELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-----cCcchhhhhhhccCCCce
Confidence            5789999999999999999999999999999999854332   56778899999988     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      .||+|||+.+|...++... ..++...++.++.+++.||+|||.+  .|+||||||.|+|+  ..+|.+||+|||+|+..
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~--~IlHRDlKPnNLLi--s~~g~lKiADFGLAr~f  151 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK--WILHRDLKPNNLLI--SSDGQLKIADFGLARFF  151 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh--hhhcccCCccceEE--cCCCcEEeecccchhcc
Confidence            9999999999999998765 5699999999999999999999965  79999999999999  67899999999999988


Q ss_pred             CCccc---cccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQTLY---QYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~~~---~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      +....   ..+-|+.|+|||.+.|. .|+..+||||.|||+.||+.|.|.|.|.++.+++..|...+|.|....|+++..
T Consensus       152 ~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~  231 (318)
T KOG0659|consen  152 GSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTS  231 (318)
T ss_pred             CCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccc
Confidence            65432   23679999999999875 699999999999999999999999999999999999999999999988887766


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...|-+-.              .  .|             ..|....+      ........||+.+||.+||.+|+|++
T Consensus       232 lpdY~~~~--------------~--~P-------------~~~~~~lf------~aas~d~ldLl~~m~~ynP~~Rita~  276 (318)
T KOG0659|consen  232 LPDYVKIQ--------------Q--FP-------------KPPLNNLF------PAASSDALDLLSKMLTYNPKKRITAS  276 (318)
T ss_pred             cccHHHHh--------------c--CC-------------CCcccccc------ccccHHHHHHHHhhhccCchhcccHH
Confidence            54442210              0  00             00000000      11112458999999999999999999


Q ss_pred             HHhcCCCcCc
Q psy11727        423 NVLRHEFFLK  432 (437)
Q Consensus       423 e~l~Hp~~~~  432 (437)
                      |+|+||||+.
T Consensus       277 qaL~~~yf~~  286 (318)
T KOG0659|consen  277 QALKHPYFKS  286 (318)
T ss_pred             HHhcchhhhc
Confidence            9999999985

>KOG0581|consensus

Probab=100.00  E-value=3.1e-53  Score=397.74  Aligned_cols=257  Identities=26%  Similarity=0.419  Sum_probs=217.3

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEec--CCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-  184 (437)
                      ..++.+..+.||+|..|+||+|+++.|++.+|+|++.  ......++..+|+.+++..     .|||||.+++.|..+. 
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-----~spyIV~~ygaF~~~~~  151 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-----QSPYIVGFYGAFYSNGE  151 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-----CCCCeeeEeEEEEeCCc
Confidence            3456778899999999999999999999999999994  3445567888899888876     7899999999999999 


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..+|+||||++ +|.++++..  +.+++....+++.+|++||.|||.. .+||||||||+|||+  +.+|+|||||||.|
T Consensus       152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLv--NskGeVKicDFGVS  226 (364)
T KOG0581|consen  152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLV--NSKGEVKICDFGVS  226 (364)
T ss_pred             eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeee--ccCCCEEecccccc
Confidence            59999999965 788777765  4699999999999999999999963 579999999999999  78999999999999


Q ss_pred             eecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHHhCCCChhhh
Q psy11727        264 CHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK-----NEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       264 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~-----~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ....+. ..+++||..|||||.+.+..|+.++||||||+.++||.+|+.||...     +..+.+..|+.  +.||..  
T Consensus       227 ~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~l--  302 (364)
T KOG0581|consen  227 GILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPRL--  302 (364)
T ss_pred             HHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCCC--
Confidence            876444 47899999999999999999999999999999999999999999874     45555555543  223210  


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                   +.+                                            .-..+|++||..||+.||.+
T Consensus       303 -------------P~~--------------------------------------------~fS~ef~~FV~~CL~Kdp~~  325 (364)
T KOG0581|consen  303 -------------PEG--------------------------------------------EFSPEFRSFVSCCLRKDPSE  325 (364)
T ss_pred             -------------Ccc--------------------------------------------cCCHHHHHHHHHHhcCCccc
Confidence                         000                                            01126899999999999999


Q ss_pred             CCCHHHHhcCCCcCcCCC
Q psy11727        418 RISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~~  435 (437)
                      |||++|+++|||+++...
T Consensus       326 R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  326 RPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             CCCHHHHhcCHHHhhccc
Confidence            999999999999997654

>KOG0592|consensus

Probab=100.00  E-value=9.4e-53  Score=409.31  Aligned_cols=257  Identities=31%  Similarity=0.462  Sum_probs=226.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      -..+|...+.||.|+|++|++|+++.+++.||||++.++    ....+-+.+|...|.+|.    .||.|++|+..|++.
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~----~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS----GHPGIVKLYFTFQDE  146 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh----CCCCeEEEEEEeecc
Confidence            356899999999999999999999999999999998642    233456677888888887    789999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ..+|+|+||++ |+|+++|++.+  .|++..++.++.||+.||+|||+  .||||||||||||||  |+++++||+|||.
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~--~GIIHRDlKPENILL--d~dmhikITDFGs  220 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHS--NGIIHRDLKPENILL--DKDGHIKITDFGS  220 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeE--cCCCcEEEeeccc
Confidence            99999999995 58999998864  59999999999999999999995  599999999999999  8999999999999


Q ss_pred             ceecCCc----------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        263 SCHVGQT----------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       263 s~~~~~~----------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      |..+...                ..+++||..|.+||++.....+..+|+|+||||||.|+.|.|||.+.++..++++|+
T Consensus       221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~  300 (604)
T KOG0592|consen  221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ  300 (604)
T ss_pred             cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence            9765321                145899999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      +..-..|+.+-                                                               +...||
T Consensus       301 ~l~y~fp~~fp---------------------------------------------------------------~~a~dL  317 (604)
T KOG0592|consen  301 ALDYEFPEGFP---------------------------------------------------------------EDARDL  317 (604)
T ss_pred             HhcccCCCCCC---------------------------------------------------------------HHHHHH
Confidence            86433322110                                                               156899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcCCCCC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~  437 (437)
                      |+++|..||.+|+|++|+-+||||..++++|
T Consensus       318 v~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  318 IKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             HHHHHccCccccccHHHHhhCcccccCChhh
Confidence            9999999999999999999999999999886

>KOG0600|consensus

Probab=100.00  E-value=3e-52  Score=402.79  Aligned_cols=280  Identities=32%  Similarity=0.523  Sum_probs=231.3

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecC---CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      ..+.|+.+++||+|.||+||+|++..||+.||+|.++.   +..+.....+|+.|++++     +||||++|.+...+. 
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-----~HpNIikL~eivt~~~  189 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-----DHPNIIKLEEIVTSKL  189 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-----CCCcccceeeEEEecC
Confidence            35679999999999999999999999999999999974   345567788999999998     789999999998876 


Q ss_pred             -CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 -NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 -~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                       ..+|||+|||+.+|..++.... -.|++.+++.|+.||+.||+|||+  .||+|||||..||||  |.+|.+||+|||+
T Consensus       190 ~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~--~gvlHRDIK~SNiLi--dn~G~LKiaDFGL  264 (560)
T KOG0600|consen  190 SGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHS--RGVLHRDIKGSNILI--DNNGVLKIADFGL  264 (560)
T ss_pred             CceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhh--cCeeeccccccceEE--cCCCCEEeccccc
Confidence             6999999999999999988754 359999999999999999999996  489999999999999  8899999999999


Q ss_pred             ceecCC----ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQ----TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |+....    ..+..+-|.+|+|||.++|. .|+.++|+||.||||.||++|+|+|.|.++.+++..|.+..|.|.+..|
T Consensus       265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W  344 (560)
T KOG0600|consen  265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYW  344 (560)
T ss_pred             eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcc
Confidence            986532    34456779999999999986 6999999999999999999999999999999999999999999998876


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      + ..+.. ++...       +.       ..+--+.+.+..                ....  ....+|+..||..||.+
T Consensus       345 ~-~~kLP-~~~~~-------kp-------~~~y~r~l~E~~----------------~~~~--~~~l~Ll~~lL~ldP~k  390 (560)
T KOG0600|consen  345 P-VSKLP-HATIF-------KP-------QQPYKRRLRETF----------------KDFP--ASALDLLEKLLSLDPDK  390 (560)
T ss_pred             c-cccCC-ccccc-------CC-------CCcccchHHHHh----------------ccCC--HHHHHHHHHHhccCccc
Confidence            5 11111 11000       00       000011222221                1111  14589999999999999


Q ss_pred             CCCHHHHhcCCCcC
Q psy11727        418 RISPTNVLRHEFFL  431 (437)
Q Consensus       418 R~t~~e~l~Hp~~~  431 (437)
                      |.||.+||+|+||+
T Consensus       391 R~tA~~aL~seyF~  404 (560)
T KOG0600|consen  391 RGTASSALQSEYFT  404 (560)
T ss_pred             cccHHHHhcCcccc
Confidence            99999999999994

>KOG0663|consensus

Probab=100.00  E-value=4.7e-52  Score=383.07  Aligned_cols=286  Identities=32%  Similarity=0.511  Sum_probs=234.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      -.+.|+.++.|++|+||.||+|+++.|++.||+|.++..+   .+.-...+|+.++...     +|||||.+..+.... 
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-----~H~NIV~vkEVVvG~~  148 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-----RHPNIVEVKEVVVGSN  148 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-----CCCCeeeeEEEEeccc
Confidence            3578999999999999999999999999999999997443   3445567889888776     789999999988754 


Q ss_pred             -CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 -NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 -~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                       +.+|||||||..+|..++..-. ++|+..+++.++.|++.|++|||.  ..|+||||||+|+|+  ...|.+||+|||+
T Consensus       149 ~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~--~wilHRDLK~SNLLm--~~~G~lKiaDFGL  223 (419)
T KOG0663|consen  149 MDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHD--NWILHRDLKTSNLLL--SHKGILKIADFGL  223 (419)
T ss_pred             cceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhh--ceeEecccchhheee--ccCCcEEecccch
Confidence             5799999999999999998765 679999999999999999999995  489999999999999  6789999999999


Q ss_pred             ceecCCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        263 SCHVGQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       263 s~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |+.++.+   .+..+-|..|+|||.+.|. .|++++||||+|||+.||++++|.|.|.++.+++.+|...+|.|.+..|+
T Consensus       224 AR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp  303 (419)
T KOG0663|consen  224 AREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP  303 (419)
T ss_pred             hhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence            9998876   4556779999999999986 59999999999999999999999999999999999999999999999887


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                      +....... .     .+.+.+.        | +..+....              +..+  ..+.-.+|+.++|.+||.+|
T Consensus       304 g~~~lp~~-k-----~~~f~~~--------p-yn~lr~kF--------------~~~~--lse~g~~Lln~llt~dP~kR  352 (419)
T KOG0663|consen  304 GYSELPAV-K-----KMTFSEH--------P-YNNLRKKF--------------GALS--LSEQGFDLLNKLLTYDPGKR  352 (419)
T ss_pred             Cccccchh-h-----ccccCCC--------C-chhhhhhc--------------cccc--cchhHHHHHHHHhccCcccc
Confidence            66543210 0     0000000        0 00000000              0000  11134799999999999999


Q ss_pred             CCHHHHhcCCCcCcCC
Q psy11727        419 ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~  434 (437)
                      .||+|+|+|+||.+..
T Consensus       353 ~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  353 ITAEDGLKHEYFRETP  368 (419)
T ss_pred             ccHHHhhcccccccCC
Confidence            9999999999999843

>KOG0616|consensus

Probab=100.00  E-value=8.3e-52  Score=376.05  Aligned_cols=254  Identities=30%  Similarity=0.491  Sum_probs=222.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|+..+.||.|+||.|.+++.+.+|..+|+|++.+...    .......|..+++.+     .||+++++++.|.+.+
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-----~~PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-----SHPFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-----cCceeEEEEEeeccCC
Confidence            5689999999999999999999999999999999974321    122233455555554     7999999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++||||||++| .|+.++++..  .+++..++.++.||+.||+|||+  ++|++|||||||||+  |.+|.+||+|||+|
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~--~~iiYRDLKPENiLl--D~~G~iKitDFGFA  191 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHS--LDIIYRDLKPENLLL--DQNGHIKITDFGFA  191 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHh--cCeeeccCChHHeee--ccCCcEEEEeccce
Confidence            99999999966 7999998864  59999999999999999999995  479999999999999  89999999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      +.......+.|||+.|+|||++..++|..++|+|||||++|||+.|.+||.+.+...++++|.+..-..|..+.+     
T Consensus       192 K~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~-----  266 (355)
T KOG0616|consen  192 KRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSS-----  266 (355)
T ss_pred             EEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCH-----
Confidence            999998999999999999999999999999999999999999999999999999999999998863333322211     


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                                                                                .++|||.++|+.|-.+|.    
T Consensus       267 ----------------------------------------------------------~~kdLl~~LL~vD~t~R~gnlk  288 (355)
T KOG0616|consen  267 ----------------------------------------------------------DAKDLLKKLLQVDLTKRFGNLK  288 (355)
T ss_pred             ----------------------------------------------------------HHHHHHHHHHhhhhHhhhcCcC
Confidence                                                                      578999999999999994    


Q ss_pred             -CHHHHhcCCCcCcCCCC
Q psy11727        420 -SPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~~~  436 (437)
                       ...++-.||||+.+.++
T Consensus       289 nG~~dIk~H~wF~~v~W~  306 (355)
T KOG0616|consen  289 NGVEDIKNHPWFKGVDWE  306 (355)
T ss_pred             CCccccccCcccccccHH
Confidence             47789999999988764

>KOG0658|consensus

Probab=100.00  E-value=5.8e-52  Score=388.31  Aligned_cols=281  Identities=36%  Similarity=0.578  Sum_probs=229.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----  184 (437)
                      .-.|.-.+++|.|+||.||+|+...+++.||||.+-.....   ..+|..++..+     .|||||++.-+|....    
T Consensus        23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l-----~HpNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKL-----DHPNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhc-----CCcCeeeEEEEEEecCCCch
Confidence            34688899999999999999999999999999998765543   33588888855     8999999999987432    


Q ss_pred             -EEEEEEEeccCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        185 -HLCLVFELLSYNLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       185 -~~~lV~E~~~~~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       ++.+||||++.+|++.++..  ....++.-.++-++.||++||+|||+  .||+||||||.|+|++ .+.|.+||||||
T Consensus        95 ~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~--~~IcHRDIKPqNlLvD-~~tg~LKicDFG  171 (364)
T KOG0658|consen   95 VYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS--HGICHRDIKPQNLLVD-PDTGVLKICDFG  171 (364)
T ss_pred             hHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh--cCcccCCCChheEEEc-CCCCeEEeccCC
Confidence             67899999999999999842  23568999999999999999999996  4899999999999995 466899999999


Q ss_pred             Cceec--CCccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHV--GQTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +|+..  +++..+++.|++|+|||.+.|. .|+.++||||.||++.||+.|+|.|.|++..+++..|++.+|.|...-+.
T Consensus       172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~  251 (364)
T KOG0658|consen  172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK  251 (364)
T ss_pred             cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence            99876  5566789999999999999985 69999999999999999999999999999999999999999999998887


Q ss_pred             cCCccch--hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        339 GASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       339 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      .+.....  -|.++...               ++.+    +.                 ......+..||+.++|.++|.
T Consensus       252 ~mn~~y~~~~~p~ik~~---------------~~~~----~~-----------------~~~~~~d~~dll~~~L~Y~P~  295 (364)
T KOG0658|consen  252 SMNPNYTEFKFPQIKAH---------------PWHK----VF-----------------FKRLPPDALDLLSKLLQYSPS  295 (364)
T ss_pred             hcCcccccccCcccccc---------------ccee----ec-----------------ccCCCHHHHHHHHHHhccChh
Confidence            6654311  01111110               0000    00                 000111568999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCCCC
Q psy11727        417 KRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      +|.||.|||.||||....+.
T Consensus       296 ~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  296 KRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             hcCCHHHHhcchhhHHhhCc
Confidence            99999999999999876543

>KOG0660|consensus

Probab=100.00  E-value=1.7e-51  Score=384.50  Aligned_cols=284  Identities=34%  Similarity=0.561  Sum_probs=233.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecC---CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-  182 (437)
                      .+..+|...+.||+|+||.|..|.++.+|+.||||.+.+   .....++..+|+.+++.+     .|+||+.+.+.+.. 
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-----~HeNIi~l~di~~p~   93 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-----RHENIIGLLDIFRPP   93 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-----cCCCcceEEeecccc
Confidence            345667778999999999999999999999999999862   334456777899999888     68899999998875 


Q ss_pred             ----CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        183 ----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       183 ----~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                          -+.+|+|+|+|+.+|.+.++.+.  .++...+..+++||++||.|+|+.  +|+||||||.|+|+  +.+..+||+
T Consensus        94 ~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSA--nViHRDLKPsNll~--n~~c~lKI~  167 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSA--NVIHRDLKPSNLLL--NADCDLKIC  167 (359)
T ss_pred             cccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcc--cccccccchhheee--ccCCCEEec
Confidence                35799999999999999998864  489999999999999999999965  79999999999999  677789999


Q ss_pred             eCCCceecC-----CccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        259 DFGSSCHVG-----QTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       259 DFG~s~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      |||+|+...     ...+.++.|+.|+|||++.. ..|+.++||||+|||+.||++|++.|.|.+..++++.|++.+|.|
T Consensus       168 DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP  247 (359)
T KOG0660|consen  168 DFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP  247 (359)
T ss_pred             cccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence            999998883     44577899999999999875 579999999999999999999999999999999999999999999


Q ss_pred             ChhhhccCC--ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        333 PGYLLHGAS--KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       333 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                      ++..+..-.  +.+.|...++.-               | ...+..++.              +    .....+||+++|
T Consensus       248 ~~e~l~~i~s~~ar~yi~slp~~---------------p-~~~f~~~fp--------------~----a~p~AidLlekm  293 (359)
T KOG0660|consen  248 SEEDLQKIRSEKARPYIKSLPQI---------------P-KQPFSSIFP--------------N----ANPLAIDLLEKM  293 (359)
T ss_pred             CHHHHHHhccHHHHHHHHhCCCC---------------C-CCCHHHHcC--------------C----CCHHHHHHHHHH
Confidence            988776443  222333322210               0 011111111              1    112568999999


Q ss_pred             cccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        411 LTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      |.+||.+|+|++|||+||||.+..+
T Consensus       294 L~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  294 LVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             hccCccccCCHHHHhcChhhhhhcC
Confidence            9999999999999999999988654

>KOG1290|consensus

Probab=100.00  E-value=5.9e-50  Score=384.81  Aligned_cols=313  Identities=35%  Similarity=0.613  Sum_probs=268.2

Q ss_pred             ceeecCceec-cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC---cEEE
Q psy11727        100 YIIKHGEKFL-DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR---YIVK  175 (437)
Q Consensus       100 ~~~~~~~~~~-~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~---~iv~  175 (437)
                      ..++.|+.|. ++|.++++||.|-|++||+|.+..+.+.||+|+.+....+......|+.++..++..+..|+   +||+
T Consensus        67 HpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   67 HPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             ceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            4577899998 89999999999999999999999999999999998766677778889999999998775554   7999


Q ss_pred             ecceeeEC----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-
Q psy11727        176 LKGHFTWK----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-  250 (437)
Q Consensus       176 l~~~~~~~----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-  250 (437)
                      |+++|...    .|+|||+|+++.+|+.+|+..++++++...++.|++||+.||.|||. ++||||-||||+|||++.+ 
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~-ecgIIHTDlKPENvLl~~~e  225 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR-ECGIIHTDLKPENVLLCSTE  225 (590)
T ss_pred             eeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH-hcCccccCCCcceeeeeccc
Confidence            99999864    59999999999999999999999999999999999999999999998 4899999999999999533 


Q ss_pred             --------------------------------------------------------------------------------
Q psy11727        251 --------------------------------------------------------------------------------  250 (437)
Q Consensus       251 --------------------------------------------------------------------------------  250 (437)
                                                                                                      
T Consensus       226 ~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~  305 (590)
T KOG1290|consen  226 IDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNN  305 (590)
T ss_pred             cchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------CC-----------------------------------------------
Q psy11727        251 -------------------------------KR-----------------------------------------------  252 (437)
Q Consensus       251 -------------------------------~~-----------------------------------------------  252 (437)
                                                     +.                                               
T Consensus       306 ~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~  385 (590)
T KOG1290|consen  306 EPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIP  385 (590)
T ss_pred             ccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCC
Confidence                                           00                                               


Q ss_pred             -----CCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC------CHHHH
Q psy11727        253 -----SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK------NEVDQ  321 (437)
Q Consensus       253 -----~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~------~~~~~  321 (437)
                           -.|||+|||-||+.....+..++|+.|+||||+.|.+|++.+||||++|+++||.||..+|...      .+++.
T Consensus       386 ~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH  465 (590)
T KOG1290|consen  386 LPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH  465 (590)
T ss_pred             CCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence                 1279999999999999888999999999999999999999999999999999999999999543      35688


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ++.|++.+|..|..+...+..++.||++-.+-.-.      .+-.++|....|.+.               -+-+.++..
T Consensus       466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI------~~LK~WpL~~VL~eK---------------Y~~s~e~A~  524 (590)
T KOG1290|consen  466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHI------RRLKPWPLYEVLIEK---------------YEWSEEDAQ  524 (590)
T ss_pred             HHHHHHHHhhccHHHHhcCcchHhhhccccceecc------cccCCCcHHHHHHHH---------------hCCCHHHHH
Confidence            99999999999999999999999999886542110      011122222222211               234567788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +|.|||.-||+++|++||||.++|+||||...+
T Consensus       525 ~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~  557 (590)
T KOG1290|consen  525 QFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVA  557 (590)
T ss_pred             HHHHHHHHHHhcCccccccHHHHhcCccccCCC
Confidence            999999999999999999999999999998654

>KOG0594|consensus

Probab=100.00  E-value=6.5e-50  Score=374.92  Aligned_cols=284  Identities=36%  Similarity=0.577  Sum_probs=234.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCc-EEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~-iv~l~~~~~~~~  184 (437)
                      ...|..+++||+|+||+||+|+.+.+|+.||+|.++....   ......+|+.+++.+.+     +| ||.+++++...+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~-----~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH-----ANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC-----CcceEEEEeeeeecc
Confidence            5568888999999999999999999999999999985543   45677899999999954     44 999999999877


Q ss_pred             ------EEEEEEEeccCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        185 ------HLCLVFELLSYNLYNLIRNTNF--HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       185 ------~~~lV~E~~~~~L~~~l~~~~~--~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                            .+++||||+..+|..++.....  .+++...++.+++||+.||+|||++  ||+||||||.|||+  ++.|.+|
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~--~IlHRDLKPQNlLi--~~~G~lK  160 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH--GILHRDLKPQNLLI--SSSGVLK  160 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC--CeecccCCcceEEE--CCCCcEe
Confidence                  8999999999999999988664  4688899999999999999999976  79999999999999  6799999


Q ss_pred             EEeCCCceecCCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        257 IIDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       257 L~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      |+|||+|+..+-+   ....++|..|+|||++.+. .|+...||||+|||++||+++++.|.|.++.+++.+|.+.+|.|
T Consensus       161 laDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP  240 (323)
T KOG0594|consen  161 LADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTP  240 (323)
T ss_pred             eeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCC
Confidence            9999999866433   3345789999999999987 79999999999999999999999999999999999999999999


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ....|+.......|-...               ..+++.+.+..++..              .+    ....||+.+||+
T Consensus       241 ~e~~Wp~v~~~~~~k~~f---------------~~~~~~~~l~~~~~~--------------~~----~~~~dll~~~L~  287 (323)
T KOG0594|consen  241 NEKDWPGVSSLPDYKAPF---------------PKWPGPKDLSSILPK--------------LD----PDGIELLSKLLQ  287 (323)
T ss_pred             CccCCCCccccccccccC---------------cCCCCccchHHhccc--------------cC----ccHHHHHHHHhc
Confidence            988777655432221100               001111122222111              00    245899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ++|.+|.|++.+|.||||....
T Consensus       288 y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  288 YDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cCcccCcCHHHHhcChhhcccc
Confidence            9999999999999999998753

>KOG0583|consensus

Probab=100.00  E-value=1.4e-49  Score=392.30  Aligned_cols=254  Identities=35%  Similarity=0.499  Sum_probs=218.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----c--ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----K--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ...++|.+.+.||+|+||+|++|.+..+++.||+|++..+    .  .......+|+.+++.+.    .||||+++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~----~HpnI~~l~ev~   89 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR----SHPNIIRLLEVF   89 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc----cCCCEeEEEEEE
Confidence            4567999999999999999999999999999999987653    1  23456668998888884    489999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEEEE
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKII  258 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ikL~  258 (437)
                      .....+++||||+.| .|++++...  +.+++..++++++||+.|++|||++  ||+||||||+|||+  +.+ +.+||+
T Consensus        90 ~t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~--gi~HRDLK~ENill--d~~~~~~Kl~  163 (370)
T KOG0583|consen   90 ATPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSR--GIVHRDLKPENILL--DGNEGNLKLS  163 (370)
T ss_pred             ecCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhC--CEeeCCCCHHHEEe--cCCCCCEEEe
Confidence            999999999999965 899999883  4699999999999999999999964  89999999999999  566 899999


Q ss_pred             eCCCceec---CCccccccccccccChhhhcCCC-CC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        259 DFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIP-YD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       259 DFG~s~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |||++...   +....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...++..|....-..|
T Consensus       164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p  243 (370)
T KOG0583|consen  164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP  243 (370)
T ss_pred             ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC
Confidence            99999876   35567899999999999999988 87 789999999999999999999999888888877655322222


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .+..                                                              ...+++||++||..
T Consensus       244 ~~~~--------------------------------------------------------------S~~~~~Li~~mL~~  261 (370)
T KOG0583|consen  244 SYLL--------------------------------------------------------------SPEARSLIEKMLVP  261 (370)
T ss_pred             CCcC--------------------------------------------------------------CHHHHHHHHHHcCC
Confidence            1110                                                              01578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCc
Q psy11727        414 DPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~  432 (437)
                      ||.+|+|+.+++.||||+.
T Consensus       262 ~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  262 DPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CcccCCCHHHHhhChhhcc
Confidence            9999999999999999997

>KOG0588|consensus

Probab=100.00  E-value=1.2e-49  Score=394.97  Aligned_cols=253  Identities=30%  Similarity=0.453  Sum_probs=220.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+-|++.+.||.|+-|.|-+|++..||+.+|||++.+..    .....+.+|+.+|+.+     .|||+++++++|+.+.
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-----~HpnVl~LydVwe~~~   85 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-----EHPNVLRLYDVWENKQ   85 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-----cCCCeeeeeeeeccCc
Confidence            567999999999999999999999999999999997552    3345677899999887     7899999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+|.||++ |.|++++...+  ++++..+.+++.||+.|+.|+|.  .+|+||||||+|+||  |.++.|||+|||+|
T Consensus        86 ~lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~--~~icHRDLKpENlLL--d~~~nIKIADFGMA  159 (786)
T KOG0588|consen   86 HLYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHA--FNICHRDLKPENLLL--DVKNNIKIADFGMA  159 (786)
T ss_pred             eEEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhh--hcceeccCCchhhhh--hcccCEeeecccee
Confidence            9999999995 58999988764  69999999999999999999995  579999999999999  77777999999999


Q ss_pred             eec--CCccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV--GQTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...  +.-..+.||++.|.|||++.|.+|+ .++||||.|||||.||||+.||.+++....+.++..+....|..+.   
T Consensus       160 sLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is---  236 (786)
T KOG0588|consen  160 SLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNIS---  236 (786)
T ss_pred             ecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCC---
Confidence            755  3445678999999999999999987 7899999999999999999999999988888888665322221110   


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                  .+++|||.+||++||.+|+|
T Consensus       237 ------------------------------------------------------------~eaQdLLr~ml~VDp~~RiT  256 (786)
T KOG0588|consen  237 ------------------------------------------------------------SEAQDLLRRMLDVDPSTRIT  256 (786)
T ss_pred             ------------------------------------------------------------HHHHHHHHHHhccCcccccc
Confidence                                                                        15689999999999999999


Q ss_pred             HHHHhcCCCcCcCCC
Q psy11727        421 PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~  435 (437)
                      .+|+++|||+.+...
T Consensus       257 ~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  257 TEEILKHPFLSGYTS  271 (786)
T ss_pred             HHHHhhCchhhcCCC
Confidence            999999999988654

>KOG0595|consensus

Probab=100.00  E-value=3.6e-49  Score=373.38  Aligned_cols=258  Identities=31%  Similarity=0.497  Sum_probs=216.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ..++|.+.+.||+|+||+||+|+.+.++..||||.+..+..   ..+-...|+.+++.+     .|||||.+++++..++
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-----~H~nIV~l~d~~~~~~   82 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-----KHPNIVRLLDCIEDDD   82 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-----CCcceeeEEEEEecCC
Confidence            35789999999999999999999999999999999975532   233456788888887     6899999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CC---CCEEEEe
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KR---SAIKIID  259 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~---~~ikL~D  259 (437)
                      ++|||||||. |+|.+++....  .+++..++.|+.||+.||++||++  +||||||||+||||+.+ .+   ..+||+|
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~--~IiHRDLKPQNiLLs~~~~~~~~~~LKIAD  158 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN--NIIHRDLKPQNILLSTTARNDTSPVLKIAD  158 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCCcceEEeccCCCCCCCceEEecc
Confidence            9999999995 68999998874  699999999999999999999965  79999999999999764 33   5699999


Q ss_pred             CCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        260 FGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       260 FG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ||+|+.....  ..+.|||+.|||||++..+.|+.|+|+||+|+|+|+|++|++||...+..+.+..+.......|.   
T Consensus       159 FGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~---  235 (429)
T KOG0595|consen  159 FGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV---  235 (429)
T ss_pred             cchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc---
Confidence            9999887543  45789999999999999999999999999999999999999999999988887766543222111   


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                          ++.++.                     ..+.+|+...|..||..
T Consensus       236 ------------------------------------~~~~~s---------------------~~~~~Ll~~ll~~~~~~  258 (429)
T KOG0595|consen  236 ------------------------------------LPAELS---------------------NPLRELLISLLQRNPKD  258 (429)
T ss_pred             ------------------------------------hhhhcc---------------------CchhhhhhHHHhcCccc
Confidence                                                000000                     02468999999999999


Q ss_pred             CCCHHHHhcCCCcCcCC
Q psy11727        418 RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~  434 (437)
                      |.+..+-+.|+|+....
T Consensus       259 ~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  259 RISFEDFFDHPFLAANP  275 (429)
T ss_pred             cCchHHhhhhhhcccCc
Confidence            99999999999987643

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.8e-48  Score=398.85  Aligned_cols=300  Identities=30%  Similarity=0.529  Sum_probs=234.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCC-CCCcEEEecceeeEC-CEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWK-NHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~-~h~~iv~l~~~~~~~-~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+.+. .|.++++++++|... .++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            578999999999999999999999999999999997544445567789999999887654 456799999998764 589


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC--------------
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--------------  252 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~--------------  252 (437)
                      |+|||+++++|.+++...  ..+++..++.++.||+.||.|||++ .|||||||||+|||+..+..              
T Consensus       208 ~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~-~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        208 CIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTE-LHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             EEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            999999999999988765  3589999999999999999999963 58999999999999953321              


Q ss_pred             CCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        253 SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      ..+||+|||.++.........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+.+.+|.+
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~  364 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL  364 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence            25999999998766655667789999999999999999999999999999999999999999999999999999999988


Q ss_pred             ChhhhccCCc--cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        333 PGYLLHGASK--TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       333 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                      |..+......  ...+++....-.    .....        ..+..+...           ...........+.|||.+|
T Consensus       365 p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--------~~~~~~~~~-----------~~~~~~~~~~~~~dli~~m  421 (467)
T PTZ00284        365 PSEWAGRCGTEEARLLYNSAGQLR----PCTDP--------KHLARIARA-----------RPVREVIRDDLLCDLIYGL  421 (467)
T ss_pred             CHHHHhhccchhHHHHhhhccccc----ccCCH--------HHHHhhhcc-----------cchhhhhchHHHHHHHHHh
Confidence            8877654321  122332211100    00000        000000000           0000011123688999999


Q ss_pred             cccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        411 LTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |++||.+|||++|+|+||||++..
T Consensus       422 L~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        422 LHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             CCcChhhCCCHHHHhcCccccccC
Confidence            999999999999999999998853

>KOG0694|consensus

Probab=100.00  E-value=2e-49  Score=396.13  Aligned_cols=258  Identities=28%  Similarity=0.419  Sum_probs=221.7

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..-.++|.+.++||+|+||+|+++..+.+++.+|||++++..    ........|..+++..+    .||.+++++.+|+
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQ  439 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQ  439 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeecccccc
Confidence            334678999999999999999999999999999999998653    23455667888888775    8999999999999


Q ss_pred             ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        182 WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       182 ~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ..+++|.||||+.|+....+..  ...+++..++.|+..|+.||.|||++  |||+||||.+||||  |.+|++||+|||
T Consensus       440 T~~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~--~IIYRDlKLdNiLL--D~eGh~kiADFG  513 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHEN--GIIYRDLKLDNLLL--DTEGHVKIADFG  513 (694)
T ss_pred             cCCeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhc--CceeeecchhheEE--cccCcEEecccc
Confidence            9999999999997754222222  24599999999999999999999965  89999999999999  889999999999


Q ss_pred             Cceec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +++..   +...+++|||+.|+|||++.+..|+.++|+|||||+||||++|++||.|+++++.+..|+..--.-|.++. 
T Consensus       514 lcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls-  592 (694)
T KOG0694|consen  514 LCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS-  592 (694)
T ss_pred             cccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCccc-
Confidence            99753   66778999999999999999999999999999999999999999999999999999999763222221111 


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                    .++.++++++|..||++|
T Consensus       593 --------------------------------------------------------------~ea~~il~~ll~k~p~kR  610 (694)
T KOG0694|consen  593 --------------------------------------------------------------KEAIAIMRRLLRKNPEKR  610 (694)
T ss_pred             --------------------------------------------------------------HHHHHHHHHHhccCcccc
Confidence                                                                          156899999999999999


Q ss_pred             CC-----HHHHhcCCCcCcCCCC
Q psy11727        419 IS-----PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       419 ~t-----~~e~l~Hp~~~~~~~~  436 (437)
                      .-     ++++..||||+..+++
T Consensus       611 LG~~e~d~~~i~~hpFFr~i~w~  633 (694)
T KOG0694|consen  611 LGSGERDAEDIKKHPFFRSIDWD  633 (694)
T ss_pred             cCCCCCCchhhhhCCccccCCHH
Confidence            96     5789999999998875

>KOG0670|consensus

Probab=100.00  E-value=4.3e-50  Score=387.63  Aligned_cols=328  Identities=35%  Similarity=0.617  Sum_probs=272.3

Q ss_pred             CCCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC-
Q psy11727         93 HDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-  171 (437)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~-  171 (437)
                      -++....|.+..++.+-.+|.+....|+|-|++|.+|.+...|..||||+|++.....+....|+.+|++|+.++.... 
T Consensus       415 WdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  415 WDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             cccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhh
Confidence            4556678999999999999999999999999999999999999999999999998888999999999999998876555 


Q ss_pred             cEEEecceeeECCEEEEEEEeccCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      |+++++.+|...+|+|||+|-+..+|.+++++.+ .-++.+..++.+++|++.||..|-  ++||+|+||||+|||+. .
T Consensus       495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK--~c~vlHaDIKPDNiLVN-E  571 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK--KCGVLHADIKPDNILVN-E  571 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH--hcCeeecccCccceEec-c
Confidence            8999999999999999999999999999998643 457999999999999999999998  67999999999999995 3


Q ss_pred             CCCCEEEEeCCCceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        251 KRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      ....+||||||+|...+.. .+.|.-+++|+|||++.|.+|+...|+||.||+||||.||+..|.|.+...++...++.-
T Consensus       572 ~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K  651 (752)
T KOG0670|consen  572 SKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK  651 (752)
T ss_pred             CcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence            5567999999999887654 456778999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceec-ccc-ccccccC----CCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLK-KST-DTRKERL----PGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKF  403 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (437)
                      |..|..|+..+......|+..-.--|.-- +.. ..+...+    |.-....+++++.         .-+..++..-.+|
T Consensus       652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q---------~~~deq~~~~~~~  722 (752)
T KOG0670|consen  652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQ---------RLPDEQPKIVQQL  722 (752)
T ss_pred             CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccC---------CCCchhHHHHHHH
Confidence            99999999888776666665332222111 111 1111111    1112223333221         1233344445578


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        404 KDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       404 ~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      .|||.+||..||++|+|+.|||.||||+.
T Consensus       723 rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  723 RDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            99999999999999999999999999985

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=4.5e-48  Score=372.55  Aligned_cols=279  Identities=31%  Similarity=0.500  Sum_probs=224.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||.|+||.||+|.+..++..||+|+++...  ........|+.++..+     .|+||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~   78 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-----KHANIVTLHDIIHTERCL   78 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-----CCCCEeeEEEEEcCCCeE
Confidence            467999999999999999999999999999999986432  2233556788887766     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        79 ~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~dlkp~Nil~--~~~~~~kl~DfG~~~~~  153 (288)
T cd07871          79 TLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKR--KILHRDLKPQNLLI--NEKGELKLADFGLARAK  153 (288)
T ss_pred             EEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEE--CCCCCEEECcCcceeec
Confidence            9999999999999887643 3578999999999999999999964  89999999999999  67888999999998765


Q ss_pred             CCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.|+...++....
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07871         154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS  233 (288)
T ss_pred             cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence            322   234567899999999876 5689999999999999999999999999999999999999999999888766544


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...|.....                 |..+.... .               .........++|||.+||++||.+|||++
T Consensus       234 ~~~~~~~~~-----------------~~~~~~~~-~---------------~~~~~~~~~~~dll~~mL~~dp~~R~t~~  280 (288)
T cd07871         234 NEEFRSYLF-----------------PQYRAQPL-I---------------NHAPRLDTDGIDLLSSLLLYETKSRISAE  280 (288)
T ss_pred             chhhhcccc-----------------CccCCCch-H---------------HhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence            333322110                 00000000 0               00000112578999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      |+|+||||
T Consensus       281 ~~l~hp~f  288 (288)
T cd07871         281 AALRHSYF  288 (288)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0033|consensus

Probab=100.00  E-value=2.7e-50  Score=357.14  Aligned_cols=258  Identities=33%  Similarity=0.474  Sum_probs=219.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..|.+.|++.+.||+|.|+.|+++.+..||+.+|+|++..++   .......+|+.|.+.+     .|||||++.+....
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-----qHP~IvrL~~ti~~   81 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQE   81 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-----CCCcEeehhhhhcc
Confidence            356788999999999999999999999999999999986432   2345677788888877     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDF  260 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DF  260 (437)
                      ..+.|||+|+|.| .|..-|...-  -+|+..+..+++||+.||.|+|.+  ||||||+||+|+|+.+.+++ -+||+||
T Consensus        82 ~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n--~IvHRDvkP~nllLASK~~~A~vKL~~F  157 (355)
T KOG0033|consen   82 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSN--GIVHRDLKPENLLLASKAKGAAVKLADF  157 (355)
T ss_pred             cceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc--CceeccCChhheeeeeccCCCceeeccc
Confidence            9999999999966 6877665542  379999999999999999999965  79999999999999765554 4999999


Q ss_pred             CCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChhhh
Q psy11727        261 GSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGYLL  337 (437)
Q Consensus       261 G~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~p~~~~~  337 (437)
                      |+|...+.  ......||+.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+....+++|+.. ...|+..| 
T Consensus       158 GvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-  236 (355)
T KOG0033|consen  158 GLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-  236 (355)
T ss_pred             ceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc-
Confidence            99988753  234678999999999999999999999999999999999999999999999999999875 22232221 


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                +                                                 ...+..++||++||..||.+
T Consensus       237 ----------~-------------------------------------------------~is~~Ak~LvrrML~~dP~k  257 (355)
T KOG0033|consen  237 ----------D-------------------------------------------------TVTPEAKSLIRRMLTVNPKK  257 (355)
T ss_pred             ----------C-------------------------------------------------cCCHHHHHHHHHHhccChhh
Confidence                      1                                                 11125689999999999999


Q ss_pred             CCCHHHHhcCCCcCc
Q psy11727        418 RISPTNVLRHEFFLK  432 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~  432 (437)
                      |+|+.|||+|||+.+
T Consensus       258 RIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  258 RITADEALKHPWICN  272 (355)
T ss_pred             hccHHHHhCCchhcc
Confidence            999999999999976

>KOG0032|consensus

Probab=100.00  E-value=1.9e-47  Score=377.09  Aligned_cols=261  Identities=32%  Similarity=0.477  Sum_probs=224.8

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ...+...|++.+.||+|.||.||+|+.+.||+.+|+|++.+....    .....+|+.+++.+.    .|||||.++++|
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~----~hpniv~l~~~~  105 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS----GHPNIVQLKDAF  105 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc----CCCCEEEEEEEE
Confidence            345577899999999999999999999999999999999765432    247888999999985    389999999999


Q ss_pred             eECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC--CCEEE
Q psy11727        181 TWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKI  257 (437)
Q Consensus       181 ~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~--~~ikL  257 (437)
                      ++.+.+++|||++. |.|++.+...  . +++..+..++.|++.|+.|||+  .||+||||||+|+|+.+...  +.+|+
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~--~-~sE~da~~~~~~il~av~~lH~--~gvvHrDlKpEN~L~~~~~~~~~~ik~  180 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK--H-YSERDAAGIIRQILEAVKYLHS--LGVVHRDLKPENLLLASKDEGSGRIKL  180 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc--c-CCHHHHHHHHHHHHHHHHHHHh--CCceeccCCHHHeeeccccCCCCcEEE
Confidence            99999999999995 5899988876  2 8999999999999999999995  58999999999999976644  57999


Q ss_pred             EeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||+|.....  .....+||+.|+|||++...+|+..+||||+||++|.|++|.+||.+.+.......|...-...+  
T Consensus       181 ~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~--  258 (382)
T KOG0032|consen  181 IDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFT--  258 (382)
T ss_pred             eeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC--
Confidence            99999988765  56678999999999999999999999999999999999999999999998888887755321111  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                              ..+                                                 |...+..+.|||++||..||
T Consensus       259 --------~~~-------------------------------------------------w~~is~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  259 --------SEP-------------------------------------------------WDDISESAKDFIRKLLEFDP  281 (382)
T ss_pred             --------CCC-------------------------------------------------ccccCHHHHHHHHHhcccCc
Confidence                    111                                                 11122367999999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|+|+.++|+|||++..
T Consensus       282 ~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  282 RKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             ccCCCHHHHhcCccccCC
Confidence            999999999999999875

>KOG0597|consensus

Probab=100.00  E-value=8.3e-49  Score=382.17  Aligned_cols=249  Identities=31%  Similarity=0.511  Sum_probs=218.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+....   .+...+|+.|++.+     .|||||.++++|+...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-----kHpniv~m~esfEt~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-----KHPNIVEMLESFETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-----CCcchhhHHHhhcccceE
Confidence            6899999999999999999999999999999999754322   33467789898887     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++|+||+.|+|+.++....  .++++.++.++.++..||.|||+.  +|+|||+||.|||+  ++.|.+|++|||+|+..
T Consensus        77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~--rilhrd~kPqniLl--~~~~~~KlcdFg~Ar~m  150 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSN--RILHRDMKPQNILL--EKGGTLKLCDFGLARAM  150 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhc--CcccccCCcceeee--cCCCceeechhhhhhhc
Confidence            9999999999999998764  599999999999999999999965  79999999999999  88999999999999877


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      +...   +...||+.|||||++.+.+|+..+|+||||||+|||++|+|||...+.......|...--.||..+       
T Consensus       151 ~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~-------  223 (808)
T KOG0597|consen  151 STNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTA-------  223 (808)
T ss_pred             ccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccc-------
Confidence            5542   356899999999999999999999999999999999999999999887777777765433333211       


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                              ...|..||+++|..||.+|+|-.+
T Consensus       224 --------------------------------------------------------S~~f~nfl~gLL~kdP~~RltW~~  247 (808)
T KOG0597|consen  224 --------------------------------------------------------SSSFVNFLQGLLIKDPAQRLTWTD  247 (808)
T ss_pred             --------------------------------------------------------cHHHHHHHHHHhhcChhhcccHHH
Confidence                                                                    116899999999999999999999


Q ss_pred             HhcCCCcCc
Q psy11727        424 VLRHEFFLK  432 (437)
Q Consensus       424 ~l~Hp~~~~  432 (437)
                      ++.|||.++
T Consensus       248 Ll~HpF~k~  256 (808)
T KOG0597|consen  248 LLGHPFWKG  256 (808)
T ss_pred             HhcChHHhh
Confidence            999999875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=6.2e-47  Score=367.17  Aligned_cols=285  Identities=31%  Similarity=0.472  Sum_probs=218.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++.....  ......+|+.++..+     .|+||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-----KHANIVLLHDIIHTKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-----CCCCcCeEEEEEecCCeE
Confidence            4689999999999999999999999999999999874322  223456687777766     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        79 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~--~ivH~dlkp~Nill--~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQR--YILHRDLKPQNLLI--SDTGELKLADFGLARAK  153 (303)
T ss_pred             EEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--CCCCCEEECCCCcceec
Confidence            9999999999998887643 4589999999999999999999964  89999999999999  67888999999998754


Q ss_pred             CC---ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQ---TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKN-EVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..   ......+|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.. ..+.+..+....+.|....++...
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (303)
T cd07869         154 SVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH  233 (303)
T ss_pred             cCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence            32   22345678999999998764 58899999999999999999999998754 345667777777777655444332


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+.    ...+....           ...+......                ......+.|||.+||++||.+|||+
T Consensus       234 ~~~~~~----~~~~~~~~-----------~~~~~~~~~~----------------~~~~~~~~dli~~mL~~dp~~R~s~  282 (303)
T cd07869         234 SLPHFK----PERFTLYS-----------PKNLRQAWNK----------------LSYVNHAEDLASKLLQCFPKNRLSA  282 (303)
T ss_pred             hccccc----cccccccC-----------CccHHHHhhc----------------cCCChHHHHHHHHHhccCchhccCH
Confidence            111100    00000000           0000000000                0001257899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      +|||+||||++..
T Consensus       283 ~~~l~h~~f~~~~  295 (303)
T cd07869         283 QAALSHEYFSDLP  295 (303)
T ss_pred             HHHhcCcccccCC
Confidence            9999999999865

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=6.9e-47  Score=363.46  Aligned_cols=280  Identities=33%  Similarity=0.566  Sum_probs=217.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||+||+|++..+++.||+|++....   ........|+.++..+     .|+||+++++++...+.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-----KQENIVELKEAFRRRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-----CCccccchhhhEecCCEE
Confidence            47999999999999999999999999999999987432   2234456677777766     688999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+++++.+.+.... ..+++..++.++.||+.||.|||+  .||+||||||+||++  +.++.+||+|||++...
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nill--~~~~~~kl~Dfg~~~~~  150 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHK--NDIVHRDIKPENLLI--SHNDVLKLCDFGFARNL  150 (287)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--cCCCcEEEeeccCcccc
Confidence            9999999988777665543 468999999999999999999995  489999999999999  67888999999999765


Q ss_pred             CCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    .....|+..|+|||++.+..++.++|+|||||++|||++|++||.+.+..+....+....+..|...+.....
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07848         151 SEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS  230 (287)
T ss_pred             cccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence            322    2245789999999999998999999999999999999999999999988888888888777766554432111


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+-                 ....|.......              ............+.|||++||++||.+|||++
T Consensus       231 ~~~~~-----------------~~~~~~~~~~~~--------------~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~  279 (287)
T cd07848         231 NPRFH-----------------GLRFPAVNHPQS--------------LERRYLGILSGVLLDLMKNLLKLNPTDRYLTE  279 (287)
T ss_pred             cchhc-----------------ccccCcccCccc--------------HHHhhhcccCHHHHHHHHHHccCCcccCCCHH
Confidence            10000                 000000000000              00000001122689999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      |+|+||||
T Consensus       280 ~~l~hp~f  287 (287)
T cd07848         280 QCLNHPAF  287 (287)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0580|consensus

Probab=100.00  E-value=1.7e-48  Score=344.91  Aligned_cols=256  Identities=28%  Similarity=0.436  Sum_probs=220.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ...++|++.+.||+|-||.||+|+.++++-.||+|++.++.    ....+..+|+.+.     .++.||||++++++|.+
T Consensus        19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIq-----s~L~hpnilrlY~~fhd   93 (281)
T KOG0580|consen   19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQ-----SHLRHPNILRLYGYFHD   93 (281)
T ss_pred             cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEee-----cccCCccHHhhhhheec
Confidence            34678999999999999999999999999999999997433    1223344444444     44589999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ....||++||.+ |.++..+.......+++..+..++.|++.||.|+|.+  +||||||||+|+|+  +..+.+||+|||
T Consensus        94 ~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k--~VIhRdiKpenlLl--g~~~~lkiAdfG  169 (281)
T KOG0580|consen   94 SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK--RVIHRDIKPENLLL--GSAGELKIADFG  169 (281)
T ss_pred             cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC--CcccCCCCHHHhcc--CCCCCeeccCCC
Confidence            999999999995 5899999977777899999999999999999999965  69999999999999  668889999999


Q ss_pred             Cceec-CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        262 SSCHV-GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       262 ~s~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .|... .....+.|||..|.|||+..+..++..+|+|++|++.||++.|.+||...+..+++++|.+.--..|..+.   
T Consensus       170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is---  246 (281)
T KOG0580|consen  170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTIS---  246 (281)
T ss_pred             ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccC---
Confidence            99877 44556789999999999999999999999999999999999999999999999999999875332221110   


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                  ....|||.+||..+|.+|.+
T Consensus       247 ------------------------------------------------------------~~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  247 ------------------------------------------------------------GGAADLISRLLVKNPIERLA  266 (281)
T ss_pred             ------------------------------------------------------------hhHHHHHHHHhccCcccccc
Confidence                                                                        14689999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      ..|++.|||+....
T Consensus       267 l~~v~~hpwI~a~~  280 (281)
T KOG0580|consen  267 LTEVMDHPWIVANG  280 (281)
T ss_pred             HHHHhhhHHHHhcC
Confidence            99999999997653

>KOG0610|consensus

Probab=100.00  E-value=1.7e-47  Score=362.06  Aligned_cols=261  Identities=27%  Similarity=0.394  Sum_probs=222.7

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..-.++|++++.||+|.-|+||+|....++..+|+|++.+.    .....+++.|..||..+     +||.++.|+..|+
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-----DHPFlPTLYa~fe  147 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-----DHPFLPTLYASFE  147 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-----CCCccchhhheee
Confidence            33467899999999999999999999999999999999743    23356777888888887     8999999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      .+++.|+|||||+| +|..+++.+..+.++++.++.++.+++.||+|||  -+|||.||||||||||  -++|+|.|+||
T Consensus       148 t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH--mlGivYRDLKPENILv--redGHIMLsDF  223 (459)
T KOG0610|consen  148 TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH--MLGIVYRDLKPENILV--REDGHIMLSDF  223 (459)
T ss_pred             ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH--hhceeeccCCcceeEE--ecCCcEEeeec
Confidence            99999999999965 8999999888888999999999999999999999  5799999999999999  78999999999


Q ss_pred             CCceecC------------------------------------C-----------------------ccccccccccccC
Q psy11727        261 GSSCHVG------------------------------------Q-----------------------TLYQYIQSRYYRS  281 (437)
Q Consensus       261 G~s~~~~------------------------------------~-----------------------~~~~~~gt~~y~a  281 (437)
                      .+|....                                    .                       ...+++||-.|+|
T Consensus       224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA  303 (459)
T KOG0610|consen  224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA  303 (459)
T ss_pred             cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence            9863210                                    0                       0123578889999


Q ss_pred             hhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceecccc
Q psy11727        282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKST  361 (437)
Q Consensus       282 PE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (437)
                      ||++.|.+.+.++|+|+||+++|||+.|..||.|.+..+++..|+...-..|..                          
T Consensus       304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--------------------------  357 (459)
T KOG0610|consen  304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--------------------------  357 (459)
T ss_pred             ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--------------------------
Confidence            999999999999999999999999999999999999999988886421111100                          


Q ss_pred             ccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC----HHHHhcCCCcCcCCCC
Q psy11727        362 DTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS----PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t----~~e~l~Hp~~~~~~~~  436 (437)
                                                         ++....++|||+++|..||.+|..    |.|+-+||||++++|.
T Consensus       358 -----------------------------------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  358 -----------------------------------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             -----------------------------------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence                                               011126799999999999999999    9999999999998874

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2.2e-46  Score=360.52  Aligned_cols=279  Identities=32%  Similarity=0.516  Sum_probs=217.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcC-CCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ++|++.+.||+|+||+||+|.+.. ++..||+|.++....   ......+|+.+++.+.  .+.||||+++++++..   
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE--TFEHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhc--ccCCCCcceEEEEEecccC
Confidence            379999999999999999999854 578899999864321   2234556777766654  3479999999998852   


Q ss_pred             --CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 --KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 --~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                        ...+++|||+++++|.+++.......+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+||
T Consensus        79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~--~~iiH~dlkp~Nil~--~~~~~~kl~Df  154 (290)
T cd07862          79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILV--TSSGQIKLADF  154 (290)
T ss_pred             CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEE--cCCCCEEEccc
Confidence              457999999999999999887655668999999999999999999996  489999999999999  67888999999


Q ss_pred             CCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |++......  .....||..|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+.+..+.|....++
T Consensus       155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            999765432  234568999999999999899999999999999999999999999999999999999988877654433


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                      .....       +...+....           ...+..+.                  ......+.+||.+||+.||++|
T Consensus       235 ~~~~~-------~~~~~~~~~-----------~~~~~~~~------------------~~~~~~~~~li~~~l~~~P~~R  278 (290)
T cd07862         235 RDVAL-------PRQAFHSKS-----------AQPIEKFV------------------TDIDELGKDLLLKCLTFNPAKR  278 (290)
T ss_pred             hhhcc-------cchhccCCC-----------CCCHHHHc------------------cCCCHHHHHHHHHHhccCchhc
Confidence            22110       000000000           00011110                  0112257899999999999999


Q ss_pred             CCHHHHhcCCCc
Q psy11727        419 ISPTNVLRHEFF  430 (437)
Q Consensus       419 ~t~~e~l~Hp~~  430 (437)
                      ||+.|+|+||||
T Consensus       279 ~s~~~~l~hp~f  290 (290)
T cd07862         279 ISAYSALSHPYF  290 (290)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0591|consensus

Probab=100.00  E-value=4.1e-49  Score=356.01  Aligned_cols=217  Identities=30%  Similarity=0.446  Sum_probs=183.9

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecc-ee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKG-HF  180 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~-~~  180 (437)
                      +..-..+|+|.++||+|+||+||++.+..+|..+|.|.+.-.   .........|+.+++.+     .|||||++++ .|
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-----~HpNIVqYy~~~f   88 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-----NHPNIVQYYAHSF   88 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-----CCchHHHHHHHhh
Confidence            344467899999999999999999999999999999998632   22234556688888887     7899999999 45


Q ss_pred             eECCE-EEEEEEecc-CcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcC--CCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        181 TWKNH-LCLVFELLS-YNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSS--PELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       181 ~~~~~-~~lV~E~~~-~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~--~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      ..++. ++||||+|+ |+|.+.++.  ...+.+++..+|+++.|++.||..+|+  .+--|+||||||.||+|  +.+|.
T Consensus        89 ~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl--~~~gv  166 (375)
T KOG0591|consen   89 IEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL--TANGV  166 (375)
T ss_pred             hccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE--cCCCc
Confidence            55554 999999995 588888753  233569999999999999999999998  33238999999999999  78999


Q ss_pred             EEEEeCCCceecCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||+++.++...   .+++|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.|++-.+.-.+|..+
T Consensus       167 vKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg  243 (375)
T KOG0591|consen  167 VKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG  243 (375)
T ss_pred             eeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC
Confidence            9999999998886543   4689999999999999999999999999999999999999999999877777777654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-47  Score=366.33  Aligned_cols=252  Identities=27%  Similarity=0.406  Sum_probs=211.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|.+..+++.||+|++....    .....+..|+.++..+     .||||+++++++.+.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-----SHPFIIRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-----CCCcHhhhHhhhccCCe
Confidence            47999999999999999999999999999999986422    1223455677777665     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+++ +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~NIli--~~~~~~kl~Dfg~~~  149 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSK--EIVYRDLKPENILL--DKEGHIKLTDFGFAK  149 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCHHHeEE--CCCCCEEEEecCcch
Confidence            9999999965 8988887653  589999999999999999999964  89999999999999  678899999999998


Q ss_pred             ecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      .........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....-..|.          
T Consensus       150 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----------  219 (291)
T cd05612         150 KLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----------  219 (291)
T ss_pred             hccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----------
Confidence            7766556678999999999999999999999999999999999999999998877776666432100000          


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC----
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS----  420 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t----  420 (437)
                                                                           .....+.+||++||+.||.+|++    
T Consensus       220 -----------------------------------------------------~~~~~~~~li~~~l~~dp~~R~~~~~~  246 (291)
T cd05612         220 -----------------------------------------------------HLDLYAKDLIKKLLVVDRTRRLGNMKN  246 (291)
T ss_pred             -----------------------------------------------------cCCHHHHHHHHHHcCCCHHHccCCccC
Confidence                                                                 00115789999999999999995    


Q ss_pred             -HHHHhcCCCcCcCCC
Q psy11727        421 -PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 -~~e~l~Hp~~~~~~~  435 (437)
                       ++++++||||+....
T Consensus       247 ~~~~~l~h~~~~~~~~  262 (291)
T cd05612         247 GADDVKNHRWFKSVDW  262 (291)
T ss_pred             CHHHHhcCccccCCCH
Confidence             999999999987543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0198|consensus

Probab=100.00  E-value=1.7e-47  Score=364.16  Aligned_cols=253  Identities=28%  Similarity=0.475  Sum_probs=202.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC--EE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN--HL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~--~~  186 (437)
                      .++...+.||+|+||+||++.+..+|+..|||.+.... ...+....|+.++..+     .|||||+++|......  .+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-----~~p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-----NHPNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-----CCCCEEeeCCccccccCeee
Confidence            45888999999999999999999999999999986432 1145578899999888     5899999999855544  79


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCCCce
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGSSC  264 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG~s~  264 (437)
                      ++.|||+++ +|.+++..... .++++.++.+++||+.||+|||++  |||||||||+|||+  +. ++.+||+|||++.
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~--g~vH~DiK~~NiLl--~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK--GIVHCDIKPANILL--DPSNGDVKLADFGLAK  166 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC--CEeccCcccceEEE--eCCCCeEEeccCcccc
Confidence            999999965 89999988765 799999999999999999999965  89999999999999  55 6889999999987


Q ss_pred             ecCC------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhh
Q psy11727        265 HVGQ------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGK-NEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       265 ~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ....      ......||+.|||||++..+ ....++|||||||++.||+||.+||... ...+.+-.+......|    
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P----  242 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP----  242 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC----
Confidence            6542      23357899999999999953 3345999999999999999999999874 3222222222111011    


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                    .+|.+                           -....++||.+||..||.
T Consensus       243 ------------------------------~ip~~---------------------------ls~~a~~Fl~~C~~~~p~  265 (313)
T KOG0198|consen  243 ------------------------------EIPDS---------------------------LSDEAKDFLRKCFKRDPE  265 (313)
T ss_pred             ------------------------------CCCcc---------------------------cCHHHHHHHHHHhhcCcc
Confidence                                          00000                           111568999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +||||.++|+|||+++.
T Consensus       266 ~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  266 KRPTAEELLEHPFLKQN  282 (313)
T ss_pred             cCcCHHHHhhChhhhcc
Confidence            99999999999999764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.2e-47  Score=372.20  Aligned_cols=253  Identities=27%  Similarity=0.415  Sum_probs=213.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .||||+++++++.+.+
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-----SHPFIVNMMCSFQDEN   91 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEcCC
Confidence            578999999999999999999999999999999996432    1223456677777665     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||+.+ +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~dlkp~NIll--~~~~~~kl~Dfg~~  165 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSK--DIIYRDLKPENLLL--DNKGHVKVTDFGFA  165 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCHHHEEE--CCCCCEEEeeccCc
Confidence            99999999965 8888887653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+....-..|          
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----------  235 (329)
T PTZ00263        166 KKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----------  235 (329)
T ss_pred             eEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----------
Confidence            8877666677899999999999999999999999999999999999999998887766666543110000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---  420 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---  420 (437)
                                                .+                           ....+.+||.+||+.||.+|++   
T Consensus       236 --------------------------~~---------------------------~~~~~~~li~~~L~~dP~~R~~~~~  262 (329)
T PTZ00263        236 --------------------------NW---------------------------FDGRARDLVKGLLQTDHTKRLGTLK  262 (329)
T ss_pred             --------------------------CC---------------------------CCHHHHHHHHHHhhcCHHHcCCCCC
Confidence                                      00                           0015689999999999999997   


Q ss_pred             --HHHHhcCCCcCcCCC
Q psy11727        421 --PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 --~~e~l~Hp~~~~~~~  435 (437)
                        +++++.||||.+..+
T Consensus       263 ~~~~~ll~hp~f~~~~~  279 (329)
T PTZ00263        263 GGVADVKNHPYFHGANW  279 (329)
T ss_pred             CCHHHHhcCCccCCCCH
Confidence              799999999987543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.9e-46  Score=380.47  Aligned_cols=279  Identities=34%  Similarity=0.607  Sum_probs=217.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-----  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-----  183 (437)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||++....   ....+|+.+++.+     .|+|||+++++|...     
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l-----~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNL-----NHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhc-----CCCCCcceeeeEeecccccC
Confidence            468999999999999999999999999999999886432   2345688888776     789999998887532     


Q ss_pred             ---CEEEEEEEeccCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 ---NHLCLVFELLSYNLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 ---~~~~lV~E~~~~~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                         .++++||||++++|.+++...  ....+++..++.++.||+.||+|||++  ||+||||||+|||++. ..+.+||+
T Consensus       137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~--~IiHrDLKp~NILl~~-~~~~vkL~  213 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK--FICHRDLKPQNLLIDP-NTHTLKLC  213 (440)
T ss_pred             CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--CEecCCcCHHHEEEcC-CCCceeee
Confidence               367899999999998877542  234689999999999999999999964  8999999999999932 33469999


Q ss_pred             eCCCceecC--CccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        259 DFGSSCHVG--QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       259 DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |||+|....  ......+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.+..+.+.+++..++.|+..
T Consensus       214 DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~  293 (440)
T PTZ00036        214 DFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED  293 (440)
T ss_pred             ccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            999997653  333456889999999998764 68999999999999999999999999999999999999999988776


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCC--CCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPG--SKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .+......  | ..+                ..|.  ...+...+              +.   .....+++||.+||++
T Consensus       294 ~~~~~~~~--~-~~~----------------~~~~~~~~~l~~~~--------------p~---~~~~~~~~li~~~L~~  337 (440)
T PTZ00036        294 QLKEMNPN--Y-ADI----------------KFPDVKPKDLKKVF--------------PK---GTPDDAINFISQFLKY  337 (440)
T ss_pred             HHHHhchh--h-hcc----------------cCCccCchhHHHHh--------------cc---CCCHHHHHHHHHHCCC
Confidence            55432210  0 000                0000  00011000              00   0112578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ||.+|||+.|+|+||||+...
T Consensus       338 dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        338 EPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             ChhHCcCHHHHhCChhHHhhh
Confidence            999999999999999997643

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.8e-46  Score=369.69  Aligned_cols=292  Identities=33%  Similarity=0.548  Sum_probs=221.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||.||+|.+..++..||+|++....   .......+|+.++..+     .|+||++++++|...
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   92 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-----NHKNIISLLNVFTPQ   92 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-----CCCCEeeeeeeeccC
Confidence            45689999999999999999999999999999999986431   2233455677766655     789999999998754


Q ss_pred             C------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 N------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +      .+|+||||++++|.+.+..    .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus        93 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~--~ivHrDlkp~NIl~--~~~~~~kl  164 (359)
T cd07876          93 KSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKI  164 (359)
T ss_pred             CCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEE--CCCCCEEE
Confidence            3      5799999999998887643    378899999999999999999964  89999999999999  67889999


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+....+.+.++.|+..
T Consensus       165 ~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  244 (359)
T cd07876         165 LDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE  244 (359)
T ss_pred             ecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence            999999754322  234578999999999999999999999999999999999999999999888999999999888876


Q ss_pred             hhccCCccc-hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        336 LLHGASKTS-KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       336 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ++....... .+....+.  +.-..    .....+.+      +     .|     .....+......+++||.+||++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~------~-----~~-----~~~~~~~~~~~~~~~li~~mL~~d  302 (359)
T cd07876         245 FMNRLQPTVRNYVENRPQ--YPGIS----FEELFPDW------I-----FP-----SESERDKLKTSQARDLLSKMLVID  302 (359)
T ss_pred             HHHHHHHHHHHHHhhCCC--CCCcc----hhhhcccc------c-----cc-----cccccccccchhHHHHHHHHhccC
Confidence            654433221 11111000  00000    00000000      0     00     000001111235789999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||+.|+|+||||+.+
T Consensus       303 P~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         303 PDKRISVDEALRHPYITVW  321 (359)
T ss_pred             cccCCCHHHHhcCchhhhh
Confidence            9999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0599|consensus

Probab=100.00  E-value=2.7e-48  Score=349.20  Aligned_cols=260  Identities=30%  Similarity=0.518  Sum_probs=218.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---------ccchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      +.+.++|.-.+.||+|..+.|.+|..+.+|..+|+|++....         .....-..|+.+++.+.    .||+|+++
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~----GHP~II~l   88 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM----GHPYIIDL   88 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc----CCCcEEEe
Confidence            445678999999999999999999999999999999986221         11223345888888875    89999999


Q ss_pred             cceeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        177 KGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      .++|+.+..+++|+|+|+ |.|+|++...-  .+|+..+++|++|++.++.|||..  .||||||||+|||+  +++.+|
T Consensus        89 ~D~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~--~IVHRDLKpENILl--ddn~~i  162 (411)
T KOG0599|consen   89 QDVYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHAR--NIVHRDLKPENILL--DDNMNI  162 (411)
T ss_pred             eeeccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHh--hhhhcccChhheee--ccccce
Confidence            999999999999999995 58999998763  599999999999999999999965  69999999999999  788899


Q ss_pred             EEEeCCCceec--CCccccccccccccChhhhcC------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q psy11727        256 KIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE  327 (437)
Q Consensus       256 kL~DFG~s~~~--~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~  327 (437)
                      ||+|||+|+.+  +......|||++|+|||.+..      .+|+..+|+|++|||||.|+.|.|||......-++..|++
T Consensus       163 ~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime  242 (411)
T KOG0599|consen  163 KISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME  242 (411)
T ss_pred             EEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh
Confidence            99999999987  566778999999999999963      3688999999999999999999999998888788888876


Q ss_pred             HhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q psy11727        328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI  407 (437)
Q Consensus       328 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  407 (437)
                      +.                         |.+.++...         ..                         ....+|||
T Consensus       243 Gk-------------------------yqF~speWa---------di-------------------------s~~~KdLI  263 (411)
T KOG0599|consen  243 GK-------------------------YQFRSPEWA---------DI-------------------------SATVKDLI  263 (411)
T ss_pred             cc-------------------------cccCCcchh---------hc-------------------------cccHHHHH
Confidence            42                         222221111         00                         01458999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        408 LRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       408 ~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+||+.||.+|+|++|+|.||||.+.+
T Consensus       264 srlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  264 SRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             HHHHeeCchhcccHHHHhcChHHHHHH
Confidence            999999999999999999999996643

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=4.3e-46  Score=366.32  Aligned_cols=280  Identities=31%  Similarity=0.524  Sum_probs=219.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC----
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK----  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~----  183 (437)
                      +|++.+.||+|+||.||+|++..++..||||++....   ....++..|+.++..+     .||||+++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-----RHPDIVEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-----CCCCEeeecceEeccCCCC
Confidence            5899999999999999999999999999999986321   1223456687777766     789999999988643    


Q ss_pred             -CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 -NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 -~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                       ..+|+||||++++|.+++....  .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIll--~~~~~~kL~Dfg~  149 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTA--NVFHRDLKPKNILA--NADCKLKICDFGL  149 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEE--CCCCcEEEccCcc
Confidence             3589999999999999887653  589999999999999999999964  89999999999999  7788999999999


Q ss_pred             ceecCCc------cccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        263 SCHVGQT------LYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       263 s~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +......      .....||..|+|||++.+  ..++.++|||||||++|+|++|++||.+.+....+..+.+..+.|+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            8754221      124578999999999876  57899999999999999999999999999988888889888998887


Q ss_pred             hhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        335 YLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       335 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      .........  ..++..+...              .+  ..+...              .+    .....+.+||.+||+
T Consensus       230 ~~~~~i~~~~~~~~~~~~~~~--------------~~--~~~~~~--------------~~----~~~~~~~~li~~~l~  275 (338)
T cd07859         230 ETISRVRNEKARRYLSSMRKK--------------QP--VPFSQK--------------FP----NADPLALRLLERLLA  275 (338)
T ss_pred             HHHHHhhhhhHHHHHHhhccc--------------CC--CchHHh--------------cC----CCChHHHHHHHHHcC
Confidence            765433211  1111111000              00  000000              00    011257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .||++|||++|+++||||++...
T Consensus       276 ~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         276 FDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             cCcccCCCHHHHhcCchhhhcCc
Confidence            99999999999999999987543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0578|consensus

Probab=100.00  E-value=2.6e-47  Score=374.11  Aligned_cols=253  Identities=26%  Similarity=0.417  Sum_probs=210.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccch-HHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ...|.....||+|+.|.||.|....+++.||||.+....+..+ -...|+.+++.     .+|+|||.+++.|...+.++
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~-----~~H~NiVnfl~Sylv~deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRD-----LHHPNIVNFLDSYLVGDELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHh-----ccchHHHHHHHHhcccceeE
Confidence            4579999999999999999999999999999999975433322 33445555554     48999999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|||||.| +|.+.+....   +++.++..|+++++.||+|||.+  ||||||||.+|||+  ..+|.+||+|||++..+
T Consensus       347 VVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~--gIiHrDIKSDnILL--~~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHAR--GIIHRDIKSDNILL--TMDGSVKLTDFGFCAQI  419 (550)
T ss_pred             EEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhc--ceeeeccccceeEe--ccCCcEEEeeeeeeecc
Confidence            99999955 7888877764   89999999999999999999964  89999999999999  66788999999999776


Q ss_pred             CC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   ...+.+||++|||||++....|+++.||||||+++.||+-|+|||-..+....+..|.. .|.|.-.        
T Consensus       420 ~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk--------  490 (550)
T KOG0578|consen  420 SEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLK--------  490 (550)
T ss_pred             ccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcC--------
Confidence            43   34578999999999999999999999999999999999999999998888777766643 2222100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                         +.......|+|||.+||+.||.+|+||.|
T Consensus       491 ---------------------------------------------------~~~klS~~~kdFL~~cL~~dv~~RasA~e  519 (550)
T KOG0578|consen  491 ---------------------------------------------------NPEKLSPELKDFLDRCLVVDVEQRASAKE  519 (550)
T ss_pred             ---------------------------------------------------CccccCHHHHHHHHHHhhcchhcCCCHHH
Confidence                                                               00001126899999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +|+||||+..
T Consensus       520 LL~HpFl~~a  529 (550)
T KOG0578|consen  520 LLEHPFLKMA  529 (550)
T ss_pred             HhcChhhhhc
Confidence            9999999643

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.7e-46  Score=358.65  Aligned_cols=256  Identities=29%  Similarity=0.427  Sum_probs=205.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      |++.+.||+|+||+||+|.+..+++.||+|.+.....    ....+..|+.++..+     .|++|+++++++.+.++++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~iv~~~~~~~~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-----NSRFVVSLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-----CCCcEEEEEEEEccCCeEE
Confidence            7889999999999999999999999999999864321    112345677777665     6889999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..+..++.||+.||+|||+  .||+||||||+|||+  ++++.++|+|||++...
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nill--~~~~~~kl~Dfg~~~~~  152 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR--ERIVYRDLKPENILL--DDRGHIRISDLGLAVQI  152 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEE--CCCCCEEEeeCCCcEEc
Confidence            99999965 78777765444568999999999999999999995  489999999999999  67888999999999765


Q ss_pred             CC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        267 GQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       267 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..  ......||..|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+......+...         
T Consensus       153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------  223 (285)
T cd05631         153 PEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE---------  223 (285)
T ss_pred             CCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc---------
Confidence            32  2334678999999999999999999999999999999999999998876543333332211110000         


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC----
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS----  420 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t----  420 (437)
                       +.                                                 ......+.+||++||+.||.+|||    
T Consensus       224 -~~-------------------------------------------------~~~s~~~~~li~~~l~~~P~~R~~~~~~  253 (285)
T cd05631         224 -YS-------------------------------------------------EKFSEDAKSICRMLLTKNPKERLGCRGN  253 (285)
T ss_pred             -CC-------------------------------------------------ccCCHHHHHHHHHHhhcCHHHhcCCCCC
Confidence             00                                                 000125789999999999999997    


Q ss_pred             -HHHHhcCCCcCcCCC
Q psy11727        421 -PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 -~~e~l~Hp~~~~~~~  435 (437)
                       ++++++||||++.+.
T Consensus       254 ~~~~~~~h~~~~~~~~  269 (285)
T cd05631         254 GAAGVKQHPIFKNINF  269 (285)
T ss_pred             CHHHHhcCHhhcCCCH
Confidence             899999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=9.5e-46  Score=359.85  Aligned_cols=282  Identities=30%  Similarity=0.492  Sum_probs=224.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|.++....  .......|+.++..+     .|+||+++++++..++..
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   79 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIVHTDKSL   79 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-----CCCCcceEEEEEeeCCeE
Confidence            4679999999999999999999999999999999874322  223455677777766     689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        80 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~--~ivH~dlkp~Nill--~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872          80 TLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRR--KVLHRDLKPQNLLI--NERGELKLADFGLARAK  154 (309)
T ss_pred             EEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--CCCCCEEECccccceec
Confidence            9999999999998887653 3589999999999999999999964  89999999999999  67888999999998765


Q ss_pred             CCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.|+...++....
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07872         155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS  234 (309)
T ss_pred             CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence            322   223467889999999875 4688999999999999999999999999999999999999999988877765443


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+.+. .                .+....                .............+.|||.+||++||.+|||+.
T Consensus       235 ~~~~~~~-~----------------~~~~~~----------------~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~  281 (309)
T cd07872         235 NDEFKNY-N----------------FPKYKP----------------QPLINHAPRLDTEGIELLTKFLQYESKKRISAE  281 (309)
T ss_pred             hhhhhhh-h----------------cCccCC----------------CchhhhccCCCHHHHHHHHHhccCChhhCCCHH
Confidence            3222110 0                000000                000000001112578999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      |+++||||+..
T Consensus       282 e~l~h~~~~~~  292 (309)
T cd07872         282 EAMKHAYFRSL  292 (309)
T ss_pred             HHhcChhhhhc
Confidence            99999999874

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0585|consensus

Probab=100.00  E-value=6.5e-47  Score=362.97  Aligned_cols=261  Identities=29%  Similarity=0.413  Sum_probs=215.1

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------------cchHHHHHHHHHHHhhhcCC
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------------FLNQAQIEVQLLEKINKADI  168 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------------~~~~~~~e~~~~~~l~~~~~  168 (437)
                      .+.+..+.|++.+.||+|.||.|.+|++..+++.||||++.++..               ..+...+|+.+++++     
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-----  165 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-----  165 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-----
Confidence            345667899999999999999999999999999999999964321               124677899998887     


Q ss_pred             CCCcEEEecceeeEC--CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        169 HSRYIVKLKGHFTWK--NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~--~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      +|+|||+|+++..+.  +.+|||+|||..+-..+..... ..+++.++++|++.++.||+|||.+  |||||||||+|+|
T Consensus       166 ~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-~els~~~Ar~ylrDvv~GLEYLH~Q--giiHRDIKPsNLL  242 (576)
T KOG0585|consen  166 HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-PELSEQQARKYLRDVVLGLEYLHYQ--GIIHRDIKPSNLL  242 (576)
T ss_pred             CCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-ccccHHHHHHHHHHHHHHHHHHHhc--CeeccccchhheE
Confidence            789999999998764  5899999999876555544332 1289999999999999999999986  7999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCC--------ccccccccccccChhhhcCCC----CCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQ--------TLYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~--------~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      |  +++|.|||+|||.+.....        ......||+.|+|||...+..    -+.+.||||+||+||.|+.|+.||-
T Consensus       243 l--~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~  320 (576)
T KOG0585|consen  243 L--SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF  320 (576)
T ss_pred             E--cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence            9  6679999999999986521        223478999999999998732    3478999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      ++...+.+.+|+..--..|                                                    .        
T Consensus       321 ~~~~~~l~~KIvn~pL~fP----------------------------------------------------~--------  340 (576)
T KOG0585|consen  321 DDFELELFDKIVNDPLEFP----------------------------------------------------E--------  340 (576)
T ss_pred             cchHHHHHHHHhcCcccCC----------------------------------------------------C--------
Confidence            9999999999976311111                                                    0        


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                       .++.++.++|||.+||+.||.+|+|..++..|||.++.-+
T Consensus       341 -~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  341 -NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             -cccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence             0123447899999999999999999999999999987643

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.3e-45  Score=354.61  Aligned_cols=278  Identities=32%  Similarity=0.532  Sum_probs=218.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----  182 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----  182 (437)
                      +|++.+.||+|+||+||+|.+..+++.||+|.++...   ........|+.+++.+..  +.|+||+++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA--FDHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh--cCCCCeeeeeeeeccccCCC
Confidence            5899999999999999999999999999999987432   122345667777777643  479999999998864     


Q ss_pred             CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        183 KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       183 ~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ...+++|||+++++|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~ivH~dikp~Nili--~~~~~~kl~dfg~  154 (288)
T cd07863          79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILV--TSGGQVKLADFGL  154 (288)
T ss_pred             CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--CCCCCEEECccCc
Confidence            3468999999999999988776555699999999999999999999964  89999999999999  6788899999999


Q ss_pred             ceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        263 SCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       263 s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      +......  .....++..|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+.++....+.+....++..
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07863         155 ARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  234 (288)
T ss_pred             cccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence            9765432  23456789999999999989999999999999999999999999999988889999888887765444321


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      ....       ...+...           ....+..+                  .......+.|||.+||++||.+|||
T Consensus       235 ~~~~-------~~~~~~~-----------~~~~~~~~------------------~~~~~~~~~~li~~~L~~dP~~R~t  278 (288)
T cd07863         235 VTLP-------RGAFSPR-----------GPRPVQSV------------------VPEIEESGAQLLLEMLTFNPHKRIS  278 (288)
T ss_pred             cccc-------ccccCCC-----------CCCchHHh------------------CcCcCHHHHHHHHHHhccCcccCCC
Confidence            1100       0000000           00000000                  0011225789999999999999999


Q ss_pred             HHHHhcCCCc
Q psy11727        421 PTNVLRHEFF  430 (437)
Q Consensus       421 ~~e~l~Hp~~  430 (437)
                      +.|++.||||
T Consensus       279 ~~~~l~hp~f  288 (288)
T cd07863         279 AFRALQHPFF  288 (288)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.9e-46  Score=368.40  Aligned_cols=253  Identities=30%  Similarity=0.443  Sum_probs=211.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC-eEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|.+.+.||+|+||.||+|.+..++ ..||+|++....    .....+..|+.++..+     .||||+++++++.+.
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~  103 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-----NHPFCVNLYGSFKDE  103 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCCcceEEEEEeC
Confidence            568999999999999999999876654 689999986321    2233455677777665     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +++|+||||+++ +|.+++....  .+++..+..++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||+
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl--~~~~~ikL~DFG~  177 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQS--LNIVYRDLKPENLLL--DKDGFIKMTDFGF  177 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEE--CCCCCEEEecCCC
Confidence            999999999955 7888887653  58999999999999999999995  489999999999999  6788999999999


Q ss_pred             ceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        263 SCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       263 s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      +........+.+||+.|+|||++.+..++.++|+|||||++|||++|.+||.+.+.......+.......|..       
T Consensus       178 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-------  250 (340)
T PTZ00426        178 AKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKF-------  250 (340)
T ss_pred             CeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCC-------
Confidence            9887666667789999999999999899999999999999999999999999988776666664321111100       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC---
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI---  419 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~---  419 (437)
                                                                              ....+.+||++||+.||.+|+   
T Consensus       251 --------------------------------------------------------~~~~~~~li~~~l~~dp~~R~~~~  274 (340)
T PTZ00426        251 --------------------------------------------------------LDNNCKHLMKKLLSHDLTKRYGNL  274 (340)
T ss_pred             --------------------------------------------------------CCHHHHHHHHHHcccCHHHcCCCC
Confidence                                                                    001568999999999999996   


Q ss_pred             --CHHHHhcCCCcCcCCC
Q psy11727        420 --SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 --t~~e~l~Hp~~~~~~~  435 (437)
                        |++++++||||++..+
T Consensus       275 ~~~~~~~~~hp~f~~~~~  292 (340)
T PTZ00426        275 KKGAQNVKEHPWFGNIDW  292 (340)
T ss_pred             CCCHHHHHcCCCcCCCCH
Confidence              8999999999987653

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.2e-45  Score=367.39  Aligned_cols=290  Identities=31%  Similarity=0.532  Sum_probs=222.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|.+.+.||+|+||.||+|++..+++.||||++....   .......+|+.+++.+     .|+||+++++++... 
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~~~~   96 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-----CCCCccccceeecccc
Confidence            4689999999999999999999999999999999986432   2223455677666655     789999999887643 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ..+|+||||++++|.+.+..    .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kL~  168 (364)
T cd07875          97 SLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKIL  168 (364)
T ss_pred             cccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC--CeecCCCCHHHEEE--CCCCcEEEE
Confidence                 36899999999999888754    378899999999999999999964  89999999999999  678889999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||++......  .....+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.+..+.|...+
T Consensus       169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  248 (364)
T cd07875         169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF  248 (364)
T ss_pred             eCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            99999766443  2345789999999999999999999999999999999999999999999999999999999888776


Q ss_pred             hccCCccc-hhhcccCCC-cceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKTS-KYFDRLSDN-SYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      +....... .+....+.- .+.                 ...+      .+..........+......++|||.+||++|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~------~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d  305 (364)
T cd07875         249 MKKLQPTVRTYVENRPKYAGYS-----------------FEKL------FPDVLFPADSEHNKLKASQARDLLSKMLVID  305 (364)
T ss_pred             HHhhhHHHHHHHhhCCCcCCCC-----------------hHhh------CccccccccccccccccHHHHHHHHHhcCcC
Confidence            65443321 111111000 000                 0000      0000000001111112236789999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||+.|+|+||||..+
T Consensus       306 P~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         306 ASKRISVDEALQHPYINVW  324 (364)
T ss_pred             cccCCCHHHHhcCcccccc
Confidence            9999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0582|consensus

Probab=100.00  E-value=4.4e-46  Score=355.20  Aligned_cols=263  Identities=29%  Similarity=0.432  Sum_probs=214.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.|++.+.||.|..++||+|+...+++.||||++...+  ...+....|+..+..+     +||||++++..|..++.+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-----~HPNIv~~~~sFvv~~~L   99 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-----DHPNIVTYHCSFVVDSEL   99 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-----CCCCcceEEEEEEeccee
Confidence            468999999999999999999999999999999997432  2345667777777766     899999999999999999


Q ss_pred             EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||.||. |+++++++..-..++++..+..|.+++++||.|||.  .|.||||||+.||||  +.+|.|||+|||.+-.
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~--~G~IHRdvKAgnILi--~~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ--NGHIHRDVKAGNILI--DSDGTVKLADFGVSAS  175 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh--cCceecccccccEEE--cCCCcEEEcCceeeee
Confidence            99999995 589999988766789999999999999999999995  489999999999999  8899999999998754


Q ss_pred             cC---Cc----cccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        266 VG---QT----LYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       266 ~~---~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +-   ..    ..+.+||+.|||||++..  .+|+.|+||||||++..||.+|..||.......++-  +...+.||...
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl--~tLqn~pp~~~  253 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL--LTLQNDPPTLL  253 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH--HHhcCCCCCcc
Confidence            31   11    145689999999999653  479999999999999999999999999877655443  33445555322


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      ....+...       +           ++                                 -...|+++|..||+.||.
T Consensus       254 t~~~~~d~-------~-----------k~---------------------------------~~ksf~e~i~~CL~kDP~  282 (516)
T KOG0582|consen  254 TSGLDKDE-------D-----------KK---------------------------------FSKSFREMIALCLVKDPS  282 (516)
T ss_pred             cccCChHH-------h-----------hh---------------------------------hcHHHHHHHHHHhhcCcc
Confidence            11100000       0           00                                 001689999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.++|+|+||++.
T Consensus       283 kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  283 KRPTASKLLKHAFFKKA  299 (516)
T ss_pred             cCCCHHHHhccHHHhhc
Confidence            99999999999999875

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.7e-45  Score=365.13  Aligned_cols=291  Identities=32%  Similarity=0.523  Sum_probs=223.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|++.+.||+|+||.||+|.+..+++.||||.+....   .......+|+.+++.+     .|+||++++++|... 
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~   89 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQK   89 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-----CCCchhceeeeeeccc
Confidence            4689999999999999999999999999999999986432   1223455677776665     789999999988654 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ..+|+||||+++++.+.+..    .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        90 ~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~--givHrDikp~Nill--~~~~~~kl~  161 (355)
T cd07874          90 SLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKIL  161 (355)
T ss_pred             cccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCChHHEEE--CCCCCEEEe
Confidence                 35799999999998887754    378899999999999999999964  89999999999999  678889999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||++......  .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.+.++.|...+
T Consensus       162 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (355)
T cd07874         162 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF  241 (355)
T ss_pred             eCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            99999765443  2346789999999999999999999999999999999999999999998899999999988887766


Q ss_pred             hccCCccc-hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        337 LHGASKTS-KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       337 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      +....... .+....+...          ....+      .      ..+.................+++||.+||.+||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~----------~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP  299 (355)
T cd07874         242 MKKLQPTVRNYVENRPKYA----------GLTFP------K------LFPDSLFPADSEHNKLKASQARDLLSKMLVIDP  299 (355)
T ss_pred             HHhhcHHHHHHHhcCCccc----------cccch------h------hccccccccccccccccchHHHHHHHHHhcCCc
Confidence            65444321 2221111000          00000      0      000000000111111223367899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|||+.|+|+||||..+
T Consensus       300 ~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         300 AKRISVDEALQHPYINVW  317 (355)
T ss_pred             hhcCCHHHHhcCcchhcc
Confidence            999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1e-45  Score=370.86  Aligned_cols=280  Identities=25%  Similarity=0.400  Sum_probs=216.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|....     ....+|+.++..+     .|||||+++++|...+..++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~l  160 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAI-----NHPSIIQLKGTFTYNKFTCL  160 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhC-----CCCCCCCEeEEEEECCeeEE
Confidence            4679999999999999999999999999999997642     3456788888877     68999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC-
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-  267 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~-  267 (437)
                      |||++.++|..++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|.... 
T Consensus       161 v~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~--~IvHrDiKP~NIll--~~~~~vkL~DFG~a~~~~~  234 (391)
T PHA03212        161 ILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN--RIIHRDIKAENIFI--NHPGDVCLGDFGAACFPVD  234 (391)
T ss_pred             EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCChHhEEE--cCCCCEEEEeCCccccccc
Confidence            9999999999888765  3589999999999999999999964  89999999999999  677889999999986532 


Q ss_pred             ---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHHHhCCCChhhh
Q psy11727        268 ---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK-------NEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       268 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~-------~~~~~~~~i~~~~~~p~~~~~  337 (437)
                         ......+||+.|+|||++.+..++.++|||||||++|||++|..||...       ....++..+....|.+|..+.
T Consensus       235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~  314 (391)
T PHA03212        235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP  314 (391)
T ss_pred             ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence               2233467999999999999999999999999999999999999776543       234677788888887765443


Q ss_pred             ccCCc-cchhhcccCCCcceeccccccccccCCCCCc-hhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASK-TSKYFDRLSDNSYVLKKSTDTRKERLPGSKR-LDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ..... ....+......           ....|..+. ....                   ......+.+||.+||++||
T Consensus       315 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-------------------~~~~~~l~~Li~~mL~~dP  364 (391)
T PHA03212        315 IDAQANLDEIYIGLAKK-----------SSRKPGSRPLWTNL-------------------YELPIDLEYLICKMLAFDA  364 (391)
T ss_pred             cchhHHHHHHHHHHHhc-----------cCCCCCCCCCHHHH-------------------hhhhhhHHHHHHHHhcCCh
Confidence            21111 01111000000           000000000 0000                   0112257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||++|+|+||||+...
T Consensus       365 ~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        365 HHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             hhCCCHHHHhcChhhccCC
Confidence            9999999999999998754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=4.3e-46  Score=364.74  Aligned_cols=246  Identities=28%  Similarity=0.440  Sum_probs=200.5

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||+|.+..+|+.||+|+++...    ........|+.++..+     .||||++++++|...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-----RHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    1122344566666554     78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++...   .
T Consensus        76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~ivHrDlkp~NIll--~~~~~~kl~DfG~a~~~~~~~  149 (323)
T cd05571          76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHS--CDVVYRDLKLENLML--DKDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEE--CCCCCEEEeeCCCCcccccCC
Confidence            9965 788887764  358999999999999999999996  489999999999999  67888999999998653   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+.......+.......|.             
T Consensus       150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-------------  216 (323)
T cd05571         150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-------------  216 (323)
T ss_pred             CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC-------------
Confidence            2334567999999999999999999999999999999999999999987766655554321000000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                                                        .....+.+||.+||+.||++||     ++.
T Consensus       217 --------------------------------------------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  246 (323)
T cd05571         217 --------------------------------------------------TLSPEAKSLLAGLLKKDPKQRLGGGPEDAK  246 (323)
T ss_pred             --------------------------------------------------CCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence                                                              0012578999999999999999     899


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      ++++||||+...+
T Consensus       247 ~ll~h~~f~~~~~  259 (323)
T cd05571         247 EIMEHRFFASINW  259 (323)
T ss_pred             HHHcCCCcCCCCH
Confidence            9999999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4717|consensus

Probab=100.00  E-value=2e-46  Score=361.78  Aligned_cols=256  Identities=32%  Similarity=0.505  Sum_probs=224.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++.+-|.+.+.||+|-|+.|-+|+.--||+.||||++.+.+   ........|+.-++..     .|||||++|++....
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-----QHpNiVRLYEViDTQ   89 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-----QHPNIVRLYEVIDTQ   89 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh-----cCcCeeeeeehhccc
Confidence            45677999999999999999999999999999999997543   2234455677777766     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ..+|||+|+-.+ +|+++|.+.. .++.++.+++++.||+.|+.|+|  ++.+|||||||+||.+- .+-|-|||+|||+
T Consensus        90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCH--qLHVVHRDLKPENVVFF-EKlGlVKLTDFGF  165 (864)
T KOG4717|consen   90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCH--QLHVVHRDLKPENVVFF-EKLGLVKLTDFGF  165 (864)
T ss_pred             ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHh--hhhhhcccCCcceeEEe-eecCceEeeeccc
Confidence            999999999955 8999998876 67999999999999999999999  67899999999999885 4678899999999


Q ss_pred             ceec--CCccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        263 SCHV--GQTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       263 s~~~--~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      +..+  +....+.||+..|.|||++.|..|+ +++||||||||||.|++|++||...++.+.+..|++.-..-|.+..  
T Consensus       166 SNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS--  243 (864)
T KOG4717|consen  166 SNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVS--  243 (864)
T ss_pred             cccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhh--
Confidence            9655  6778899999999999999999998 6799999999999999999999999999999999875333332221  


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                   .+++|||..||..||.+|.
T Consensus       244 -------------------------------------------------------------~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  244 -------------------------------------------------------------KECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             -------------------------------------------------------------HHHHHHHHHHHhcCchhhc
Confidence                                                                         2689999999999999999


Q ss_pred             CHHHHhcCCCcCcCC
Q psy11727        420 SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~  434 (437)
                      |.+++..|+|++..+
T Consensus       263 slEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  263 SLEEIVSTSWLQAGD  277 (864)
T ss_pred             cHHHHhccccccCCC
Confidence            999999999999765

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.1e-45  Score=365.72  Aligned_cols=255  Identities=24%  Similarity=0.396  Sum_probs=204.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|.+..+++.||||++....    .....+..|+.++..+     .|+||+++++.+.+.+.
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-----~~~~iv~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-----DSLWVVKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCCe
Confidence            47999999999999999999999999999999997432    1223445566666554     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||++| +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~givHrDlKp~NILi--~~~~~vkL~DFGla~  149 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQ--LGFIHRDIKPDNLLL--DSKGHVKLSDFGLCT  149 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEE--CCCCCEEEeeccCcc
Confidence            9999999965 788888764  358999999999999999999995  489999999999999  678899999999986


Q ss_pred             ecCCc--------------------------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHH
Q psy11727        265 HVGQT--------------------------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL  306 (437)
Q Consensus       265 ~~~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el  306 (437)
                      .....                                      ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el  229 (363)
T cd05628         150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM  229 (363)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence            43211                                      1235799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCC
Q psy11727        307 HTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPG  386 (437)
Q Consensus       307 ltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (437)
                      ++|.+||.+.+..+...++........                                  .|...              
T Consensus       230 l~G~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------~p~~~--------------  261 (363)
T cd05628         230 LIGYPPFCSETPQETYKKVMNWKETLI----------------------------------FPPEV--------------  261 (363)
T ss_pred             HhCCCCCCCCCHHHHHHHHHcCcCccc----------------------------------CCCcC--------------
Confidence            999999999888777776654211000                                  00000              


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHccccCCC---CCCCHHHHhcCCCcCcCCC
Q psy11727        387 GRRRNEPGHSLADYMKFKDLILRMLTYDPK---KRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~dli~~~L~~dP~---~R~t~~e~l~Hp~~~~~~~  435 (437)
                                 .....+.+||.+|+. +|.   .||+++|+++||||++..+
T Consensus       262 -----------~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~  301 (363)
T cd05628         262 -----------PISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDW  301 (363)
T ss_pred             -----------CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCH
Confidence                       001156899999875 454   4589999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0662|consensus

Probab=100.00  E-value=9e-46  Score=314.50  Aligned_cols=281  Identities=31%  Similarity=0.554  Sum_probs=236.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|.-.++||+|.||+||+|++..+++.||+|.++..   ........+|+-+++.+     .|.|||++++....+..+.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-----khknivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-----hhcceeehhhhhccCceeE
Confidence            566778999999999999999999999999999743   34457788999999998     6788999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +|+|||..+|..++...+ +.+..+.++.++.|++.+|.++|++  .+.||||||.|.|+  +.+|++||+|||+++-++
T Consensus        78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh--nvlhrdlkpqnlli--n~ngelkladfglarafg  152 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH--NVLHRDLKPQNLLI--NRNGELKLADFGLARAFG  152 (292)
T ss_pred             EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh--hhhhccCCcceEEe--ccCCcEEecccchhhhcC
Confidence            999999999999998876 5689999999999999999999987  59999999999999  889999999999998887


Q ss_pred             Cccccc---cccccccChhhhcCC-CCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLYQY---IQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~~~---~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      -+...+   +-|..|++|.++.|. -|++.+|+||-|||+.|+.. |+|.|.|.+..+++.+|...+|+|.+..|+...+
T Consensus       153 ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~  232 (292)
T KOG0662|consen  153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK  232 (292)
T ss_pred             CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc
Confidence            765443   558999999999886 58999999999999999987 8999999999999999999999999988877655


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...|-..                -..|...++..|...-+  .                .=+||++++|.-+|..|++++
T Consensus       233 lpdyk~y----------------p~ypattswsqivp~ln--s----------------~grdllqkll~cnp~qrisae  278 (292)
T KOG0662|consen  233 LPDYKPY----------------PIYPATTSWSQIVPKLN--S----------------TGRDLLQKLLKCNPAQRISAE  278 (292)
T ss_pred             CCCCccc----------------CCccccchHHHHhhhhc--c----------------hhHHHHHHHhccCcccccCHH
Confidence            4333110                01122333333322111  0                127999999999999999999


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      ++|+||||.+...
T Consensus       279 aalqhpyf~d~s~  291 (292)
T KOG0662|consen  279 AALQHPYFSDFSP  291 (292)
T ss_pred             HHhcCccccccCC
Confidence            9999999998653

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-45  Score=362.55  Aligned_cols=260  Identities=28%  Similarity=0.397  Sum_probs=211.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.++..+     .|+||+++++++...++
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-----KSEWLVKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-----CCCCCccEEEEEEcCCE
Confidence            46999999999999999999999999999999997432    1123344566666554     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .|+||||+++ +|.+++....  .+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~--~~~~~~kL~Dfg~a~  149 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHE--LGYIHRDLKPENFLI--DASGHIKLTDFGLSK  149 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEE--CCCCCEEEEeCcCCc
Confidence            9999999965 8988887643  58999999999999999999995  489999999999999  678899999999998


Q ss_pred             ecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..........||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+....+.........          
T Consensus       150 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----------  219 (333)
T cd05600         150 GIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR----------  219 (333)
T ss_pred             ccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC----------
Confidence            7766556678999999999999999999999999999999999999999998877766665432110000          


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                              |...                   .+.  ......+.+||.+||..+|.+|||++++
T Consensus       220 ------------------------~~~~-------------------~~~--~~~s~~~~~li~~~l~~~~~rr~s~~~l  254 (333)
T cd05600         220 ------------------------PVYD-------------------DPR--FNLSDEAWDLITKLINDPSRRFGSLEDI  254 (333)
T ss_pred             ------------------------CCCC-------------------ccc--cccCHHHHHHHHHHhhChhhhcCCHHHH
Confidence                                    0000                   000  0011257899999999999999999999


Q ss_pred             hcCCCcCcCCC
Q psy11727        425 LRHEFFLKHSV  435 (437)
Q Consensus       425 l~Hp~~~~~~~  435 (437)
                      ++||||++..+
T Consensus       255 l~h~~~~~~~~  265 (333)
T cd05600         255 KNHPFFKEVDW  265 (333)
T ss_pred             HhCcccCCCCH
Confidence            99999998643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.7e-45  Score=361.91  Aligned_cols=281  Identities=31%  Similarity=0.574  Sum_probs=222.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|.+.+.||+|+||+||+|.+..+++.||||++.....   .......|+.+++.+     .|+||++++++|... 
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   87 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-----KHENVIGLLDVFTPAT   87 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-----CCCchhhhhhhhcccc
Confidence            45789999999999999999999999999999999864321   123445677777765     789999999988643 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ...|+++|+++++|.+++...   .+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+
T Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrdikp~Nil~--~~~~~~kl~  160 (343)
T cd07878          88 SIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHS--AGIIHRDLKPSNVAV--NEDCELRIL  160 (343)
T ss_pred             cccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeecccCChhhEEE--CCCCCEEEc
Confidence                 467999999988998877643   48999999999999999999995  489999999999999  678889999


Q ss_pred             eCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       259 DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.++....
T Consensus       161 Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07878         161 DFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL  240 (343)
T ss_pred             CCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            99999887776667789999999999987 56899999999999999999999999999888889999888888776655


Q ss_pred             ccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ......  ..+...++.               .+. ..+..+.                  ......+.+||.+||.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~---------------~~~-~~~~~~~------------------~~~~~~~~~li~~mL~~dp  286 (343)
T cd07878         241 KKISSEHARKYIQSLPH---------------MPQ-QDLKKIF------------------RGANPLAIDLLEKMLVLDS  286 (343)
T ss_pred             HhcchhhHHHHhhcccc---------------ccc-hhHHHhc------------------cCCCHHHHHHHHHHcCCCh
Confidence            432211  111111000               000 0000000                  0011246899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||+.|+|+||||.+..
T Consensus       287 ~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         287 DKRISASEALAHPYFSQYH  305 (343)
T ss_pred             hhCCCHHHHhcCcchhccC
Confidence            9999999999999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4.3e-45  Score=357.81  Aligned_cols=252  Identities=27%  Similarity=0.419  Sum_probs=204.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +|++.+.||+|+||.||+|.+..+++.||||++....    ........|..++..+.    +|++|+++++++.+.+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC----CCCceeeeEEEEEcCCEE
Confidence            4889999999999999999999999999999997432    12233445555555443    456799999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+++ +|.+++....  .+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill--~~~~~~kL~Dfg~~~~  150 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVML--DAEGHIKIADFGMCKE  150 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEE--cCCCCEEEeecCccee
Confidence            999999965 7888876543  48999999999999999999996  489999999999999  6788899999999864


Q ss_pred             c---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 V---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .   .......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.......|.        
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~--------  222 (324)
T cd05587         151 NIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK--------  222 (324)
T ss_pred             cCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            3   22233467899999999999999999999999999999999999999998887777666432110000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH-
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP-  421 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~-  421 (437)
                                                                             .....+.+||.+||..||.+|++. 
T Consensus       223 -------------------------------------------------------~~~~~~~~li~~~l~~~P~~R~~~~  247 (324)
T cd05587         223 -------------------------------------------------------SLSKEAVSICKGLLTKHPAKRLGCG  247 (324)
T ss_pred             -------------------------------------------------------CCCHHHHHHHHHHhhcCHHHcCCCC
Confidence                                                                   000156899999999999999986 


Q ss_pred             ----HHHhcCCCcCcCCC
Q psy11727        422 ----TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ----~e~l~Hp~~~~~~~  435 (437)
                          +++++||||+..++
T Consensus       248 ~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         248 PTGERDIREHAFFRRIDW  265 (324)
T ss_pred             CCCHHHHhcCCCcCCCCH
Confidence                89999999987653

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=6.8e-45  Score=354.87  Aligned_cols=283  Identities=28%  Similarity=0.505  Sum_probs=207.9

Q ss_pred             eceecccCceEEEEEEEc--CCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNHLCLVF  190 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~~~lV~  190 (437)
                      .++||+|+||+||+|.+.  .+++.||+|.+... .......+|+.+++.+     .||||++++++|..  ...+|+||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT-GISMSACREIALLREL-----KHPNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC-CCcHHHHHHHHHHHhc-----CCCCCcceeeeEecCCCcEEEEEE
Confidence            457999999999999865  46789999999743 3345567788888877     68999999999864  46789999


Q ss_pred             EeccCcHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--CCCCCEEEEeCC
Q psy11727        191 ELLSYNLYNLIRNTN-------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKIIDFG  261 (437)
Q Consensus       191 E~~~~~L~~~l~~~~-------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--~~~~~ikL~DFG  261 (437)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++  ||+||||||+|||+..  +..+.+||+|||
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC--CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            999999988875432       12489999999999999999999964  8999999999999953  345789999999


Q ss_pred             CceecCCc------cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH
Q psy11727        262 SSCHVGQT------LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQMTKI  325 (437)
Q Consensus       262 ~s~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---------~~~~~~i  325 (437)
                      ++......      .....||+.|+|||++.+. .++.++|||||||++|+|++|++||.+...         .+++..+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~  237 (317)
T cd07868         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI  237 (317)
T ss_pred             ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence            99765432      2345789999999999874 589999999999999999999999976543         3567788


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      ...++.|+...+..............+  +        ....... ..+...+..              ........+.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~d  292 (317)
T cd07868         238 FNVMGFPADKDWEDIKKMPEHSTLMKD--F--------RRNTYTN-CSLIKYMEK--------------HKVKPDSKAFH  292 (317)
T ss_pred             HHhcCCCChHHhHHHhhccchhhhhhh--h--------hccccCc-ccccchHHh--------------cCCCCChHHHH
Confidence            888888877665543221110000000  0        0000000 000000000              00001125789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        406 LILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ||.+||++||.+|||++|+|+||||
T Consensus       293 li~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         293 LLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HHHHHhccCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-45  Score=365.52  Aligned_cols=255  Identities=27%  Similarity=0.442  Sum_probs=206.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|++..+++.||||++....    .....+..|+.++..+     .|+||++++++|.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-----DNPWVVKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCe
Confidence            47999999999999999999999999999999997421    1223445677777765     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+++ +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.++|+|||++.
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~--~~~~~~kl~Dfg~~~  149 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHK--LGYIHRDIKPDNLLL--DAKGHIKLSDFGLCT  149 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEE--CCCCCEEEeecccce
Confidence            9999999965 7888887643  58999999999999999999995  489999999999999  778899999999986


Q ss_pred             ecCCc-----------------------------------------cccccccccccChhhhcCCCCCCcchHHHHHHHH
Q psy11727        265 HVGQT-----------------------------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCIL  303 (437)
Q Consensus       265 ~~~~~-----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il  303 (437)
                      .....                                         ....+||+.|+|||++.+..++.++|||||||++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  229 (364)
T cd05599         150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM  229 (364)
T ss_pred             eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHH
Confidence            43211                                         1134689999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCC
Q psy11727        304 VELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNG  383 (437)
Q Consensus       304 ~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (437)
                      |||++|.+||.+.+..+....+.......                                  ..|...           
T Consensus       230 ~el~~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------~~~~~~-----------  264 (364)
T cd05599         230 YEMLVGYPPFCSDNPQETYRKIINWKETL----------------------------------QFPDEV-----------  264 (364)
T ss_pred             HHhhcCCCCCCCCCHHHHHHHHHcCCCcc----------------------------------CCCCCC-----------
Confidence            99999999999888766665554310000                                  000000           


Q ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---HHHHhcCCCcCcCCC
Q psy11727        384 GPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---PTNVLRHEFFLKHSV  435 (437)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---~~e~l~Hp~~~~~~~  435 (437)
                                    .....+.+||++||. +|.+|++   +.|+++||||++..+
T Consensus       265 --------------~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~  304 (364)
T cd05599         265 --------------PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDW  304 (364)
T ss_pred             --------------CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence                          001156899999997 9999998   999999999987643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-45  Score=363.52  Aligned_cols=255  Identities=31%  Similarity=0.477  Sum_probs=209.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|.+.+.||+|+||+||+|.+..+++.||||++....    .....+..|+.++..+     .|+||+++++++.+.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-----DSPWIVKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-----CCCCccchhhheecCCe
Confidence            47999999999999999999999999999999997432    2223455566666655     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~--~giiH~Dlkp~NIll--~~~~~~kL~Dfg~~~  149 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHK--LGFIHRDIKPDNILI--DADGHIKLADFGLCK  149 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEE--CCCCCEEeecCCCCc
Confidence            9999999965 898888765  468999999999999999999996  589999999999999  778899999999987


Q ss_pred             ecCCcc--------------------------------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        265 HVGQTL--------------------------------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       265 ~~~~~~--------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      ......                                ....||+.|+|||++.+..++.++|||||||++|||++|++|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P  229 (350)
T cd05573         150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP  229 (350)
T ss_pred             cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence            654322                                345689999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+.+......++.......                                  ..|....                   
T Consensus       230 f~~~~~~~~~~~i~~~~~~~----------------------------------~~p~~~~-------------------  256 (350)
T cd05573         230 FYSDTLQETYNKIINWKESL----------------------------------RFPPDPP-------------------  256 (350)
T ss_pred             CCCCCHHHHHHHHhccCCcc----------------------------------cCCCCCC-------------------
Confidence            99988766666654311000                                  0000000                   


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCC-HHHHhcCCCcCcCCC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRIS-PTNVLRHEFFLKHSV  435 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t-~~e~l~Hp~~~~~~~  435 (437)
                            ....+.+||.+||. ||.+|++ ++++++||||++..+
T Consensus       257 ------~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~  293 (350)
T cd05573         257 ------VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDW  293 (350)
T ss_pred             ------CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCH
Confidence                  01257899999998 9999999 999999999988654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=3.6e-45  Score=357.75  Aligned_cols=247  Identities=27%  Similarity=0.421  Sum_probs=201.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.++.+++.||+|++....    ........|..++..+    ..||||+++++++.+.+.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA----RNHPFLTQLYCCFQTPDRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc----cCCCchhceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999986421    1122334455555443    268999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|.+++...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++...   .
T Consensus        77 y~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~--~~ivH~dlkp~NIli--~~~~~~kL~DfG~~~~~~~~~  150 (320)
T cd05590          77 FVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD--KGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGIFNG  150 (320)
T ss_pred             CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEE--CCCCcEEEeeCCCCeecCcCC
Confidence            9965 788877654  358999999999999999999995  489999999999999  67888999999998653   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+....+.......|.+            
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------  218 (320)
T cd05590         151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW------------  218 (320)
T ss_pred             CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCC------------
Confidence            22344678999999999999999999999999999999999999999988877766664321111000            


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH------
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP------  421 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~------  421 (437)
                                                                         ....+.+||++||+.||.+|||+      
T Consensus       219 ---------------------------------------------------~~~~~~~li~~~L~~dP~~R~~~~~~~~~  247 (320)
T cd05590         219 ---------------------------------------------------LSQDAVDILKAFMTKNPTMRLGSLTLGGE  247 (320)
T ss_pred             ---------------------------------------------------CCHHHHHHHHHHcccCHHHCCCCCCCCCH
Confidence                                                               00157899999999999999998      


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      +++++||||+...+
T Consensus       248 ~~~~~h~~f~~~~~  261 (320)
T cd05590         248 EAILRHPFFKELDW  261 (320)
T ss_pred             HHHHcCCCcCCCCH
Confidence            99999999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=5.5e-45  Score=357.06  Aligned_cols=251  Identities=26%  Similarity=0.412  Sum_probs=204.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      |.+.+.||+|+||.||+|.+..+++.||||+++...    ........|+.+++.+.  .+.||||+++++++.+.+++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~--~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN--SERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--ccCCCChhceeeEEEcCCEEE
Confidence            678999999999999999999999999999997432    12234455666555443  357999999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|...+..   ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++...
T Consensus        79 lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrdlkp~Nill--~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          79 FVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHE--NKIVYRDLKLDNLLL--DTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEE--CCCCcEEeCcccCCccC
Confidence            99999966 67766654   358999999999999999999995  489999999999999  67889999999998643


Q ss_pred             ---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 ---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                         .......+|++.|+|||++.+..++.++|+|||||++|+|++|++||.+.+..+....+.......|..        
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~--------  223 (324)
T cd05589         152 MGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF--------  223 (324)
T ss_pred             CCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC--------
Confidence               222345678999999999999999999999999999999999999999988777666654321111000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                                                                             ....+.+||.+||+.||.+||    
T Consensus       224 -------------------------------------------------------~~~~~~~li~~~L~~dP~~R~~~~~  248 (324)
T cd05589         224 -------------------------------------------------------LSREAISIMRRLLRRNPERRLGSGE  248 (324)
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                                                                   001568999999999999999    


Q ss_pred             -CHHHHhcCCCcCcCC
Q psy11727        420 -SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~  434 (437)
                       +++++++||||++..
T Consensus       249 ~~~~~l~~~~~f~~~~  264 (324)
T cd05589         249 KDAEDVKKQPFFRDIN  264 (324)
T ss_pred             CCHHHHhhCCCcCCCC
Confidence             799999999998754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-45  Score=365.79  Aligned_cols=254  Identities=27%  Similarity=0.422  Sum_probs=203.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|.+.+.||+|+||+||+|.+..+++.||||++....    .....+..|+.++..+     .||||++++++|.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-----DSPWVVSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCe
Confidence            47999999999999999999999999999999986422    1223455577666654     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||+++
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~--~givHrDlkp~NIll--~~~~~~kl~DfGla~  149 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHK--LGFIHRDIKPDNILI--DRGGHIKLSDFGLST  149 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEE--CCCCCEEEeeccccc
Confidence            9999999954 888888754  458999999999999999999995  489999999999999  678899999999985


Q ss_pred             ecCCc--------------------------------------------------cccccccccccChhhhcCCCCCCcc
Q psy11727        265 HVGQT--------------------------------------------------LYQYIQSRYYRSPEVLLGIPYDLAI  294 (437)
Q Consensus       265 ~~~~~--------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~  294 (437)
                      .....                                                  ....+||+.|+|||++.+..++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  229 (377)
T cd05629         150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQEC  229 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCce
Confidence            32110                                                  0124689999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCch
Q psy11727        295 DMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL  374 (437)
Q Consensus       295 DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (437)
                      |||||||++|||++|.+||.+.+..+.+..+.......                                  ..|.... 
T Consensus       230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------~~p~~~~-  274 (377)
T cd05629         230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL----------------------------------YFPDDIH-  274 (377)
T ss_pred             eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc----------------------------------CCCCCCC-
Confidence            99999999999999999999888777666654311000                                  0000000 


Q ss_pred             hhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC---CCHHHHhcCCCcCcCC
Q psy11727        375 DTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR---ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R---~t~~e~l~Hp~~~~~~  434 (437)
                                              ....+.+||.+||. +|.+|   +|+.|+++||||+...
T Consensus       275 ------------------------~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~  312 (377)
T cd05629         275 ------------------------LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD  312 (377)
T ss_pred             ------------------------CCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence                                    00157899999998 77775   5999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=8.2e-45  Score=355.66  Aligned_cols=252  Identities=26%  Similarity=0.383  Sum_probs=205.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +|.+.+.||+|+||+||+|.+..+++.||+|++......    ......|..++..+    .+|++|+++++++...+.+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALS----GKPPFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCeEeeEEEEEecCCEE
Confidence            488999999999999999999999999999999743211    12233344444433    2678999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+.+...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        77 ~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill--~~~~~~kL~DfG~~~~  150 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVML--DSEGHIKIADFGMCKE  150 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCEEecCCCHHHeEE--CCCCcEEEccCCCcee
Confidence            999999965 788887654  358999999999999999999995  489999999999999  7788999999999875


Q ss_pred             cC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..   ......+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+.......+.......|..       
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~-------  223 (323)
T cd05616         151 NMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-------  223 (323)
T ss_pred             cCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc-------
Confidence            42   22335678999999999999999999999999999999999999999988877777765421111100       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC--
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS--  420 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t--  420 (437)
                                                                              ....+.+||.+||+.||.+|++  
T Consensus       224 --------------------------------------------------------~s~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05616         224 --------------------------------------------------------MSKEAVAICKGLMTKHPGKRLGCG  247 (323)
T ss_pred             --------------------------------------------------------CCHHHHHHHHHHcccCHHhcCCCC
Confidence                                                                    0115789999999999999998  


Q ss_pred             ---HHHHhcCCCcCcCCC
Q psy11727        421 ---PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ---~~e~l~Hp~~~~~~~  435 (437)
                         ..++++||||+...+
T Consensus       248 ~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         248 PEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             CCCHHHHhcCCCcCCCCH
Confidence               489999999987653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.1e-44  Score=349.04  Aligned_cols=282  Identities=28%  Similarity=0.469  Sum_probs=220.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|.+.+.||+|+||.||+|.+..++..||+|.++...  ........|+.++..+     .|+||+++++++...+.+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nI~~~~~~~~~~~~~   79 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSL   79 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-----CCCCcceEEEEEecCCeE
Confidence            468999999999999999999999999999999986432  2223455677777766     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.++|+|||++...
T Consensus        80 ~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~--~~i~H~dlkp~Nil~--~~~~~~kl~dfg~~~~~  154 (301)
T cd07873          80 TLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHR--RKVLHRDLKPQNLLI--NERGELKLADFGLARAK  154 (301)
T ss_pred             EEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHHHEEE--CCCCcEEECcCcchhcc
Confidence            9999999999998887653 458999999999999999999996  489999999999999  67788999999998654


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....++..|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+....+...++.|+...++....
T Consensus       155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (301)
T cd07873         155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS  234 (301)
T ss_pred             CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence            322   2234568899999998764 578899999999999999999999999998888888888888887665543322


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+..                 ...|....                .............+.+||.+||++||.+|||++
T Consensus       235 ~~~~~~-----------------~~~~~~~~----------------~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~  281 (301)
T cd07873         235 NEEFKS-----------------YNYPKYRA----------------DCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE  281 (301)
T ss_pred             cccccc-----------------cccCcccc----------------ccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence            111100                 00000000                000000001112578999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      |+++||||+..
T Consensus       282 eil~h~~f~~~  292 (301)
T cd07873         282 EAMKHPYFHCL  292 (301)
T ss_pred             HHhcCcccccc
Confidence            99999999864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=9.2e-45  Score=362.21  Aligned_cols=280  Identities=29%  Similarity=0.444  Sum_probs=218.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC---
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN---  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~---  184 (437)
                      +|++.+.||+|+||+||+|.+..+++.||||.+....   ....++.+|+.++..+     .|+||+++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-----KHDNVLSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-----CCCCcCCHhheecCCCccc
Confidence            4788999999999999999999999999999986431   1224556677777665     6899999999998876   


Q ss_pred             --EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        185 --HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       185 --~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                        +.|+||||+.++|.+.+...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~--~ivH~dlkp~Nili--~~~~~~kL~Dfg~  149 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA--GILHRDIKPGNLLV--NSNCVLKICDFGL  149 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChHHEEE--CCCCCEEeccccc
Confidence              89999999999998888654  3589999999999999999999964  89999999999999  6788999999999


Q ss_pred             ceecCCc----cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQT----LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      +......    .....+++.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+++..+.+.+|.|+...+
T Consensus       150 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~  229 (372)
T cd07853         150 ARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM  229 (372)
T ss_pred             eeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence            9765322    2234678899999999874 4789999999999999999999999999999999999999998876554


Q ss_pred             ccCCcc-chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        338 HGASKT-SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       338 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      ...... ..++....              ...+   ......               .........+.+||.+||++||.
T Consensus       230 ~~~~~~~~~~~~~~~--------------~~~~---~~~~~~---------------~~~~~~~~~~~~li~~mL~~dP~  277 (372)
T cd07853         230 RSACEGARAHILRGP--------------HKPP---SLPVLY---------------TLSSQATHEAVHLLCRMLVFDPD  277 (372)
T ss_pred             HHhhHHHHHHHHhCC--------------CCCC---chHHhc---------------ccCCCCCHHHHHHHHHhCCCChh
Confidence            332211 11110000              0000   000000               00011123678999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.|+|+||||++.
T Consensus       278 ~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         278 KRISAADALAHPYLDEG  294 (372)
T ss_pred             hCcCHHHHhcCHhhCCC
Confidence            99999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=9.4e-45  Score=363.32  Aligned_cols=255  Identities=25%  Similarity=0.379  Sum_probs=202.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .|++++.||+|+||+||+|++..+++.||||++....    .....+..|+.+++.+     .|+||+++++++.+.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-----DNEWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeeeeEEEEecCCEE
Confidence            5899999999999999999999999999999997432    1223455677777665     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+++ +|.+++....  .+++..++.++.||+.||.|||.  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~--~givHrDlKp~Nili--~~~~~~kL~DFGl~~~  150 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHK--MGFIHRDIKPDNILI--DLDGHIKLTDFGLCTG  150 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCcHHHEEE--CCCCCEEEeeCcCCcc
Confidence            999999965 7888887643  58999999999999999999995  589999999999999  6788999999998743


Q ss_pred             cCC--------------------------------------------------ccccccccccccChhhhcCCCCCCcch
Q psy11727        266 VGQ--------------------------------------------------TLYQYIQSRYYRSPEVLLGIPYDLAID  295 (437)
Q Consensus       266 ~~~--------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D  295 (437)
                      ...                                                  ...+.+||+.|+|||++.+..++.++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D  230 (381)
T cd05626         151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCD  230 (381)
T ss_pred             cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccc
Confidence            210                                                  012357999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchh
Q psy11727        296 MWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD  375 (437)
Q Consensus       296 vwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (437)
                      ||||||++|||++|.+||.+.+..+....+......+.                                  .|...   
T Consensus       231 iwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------~~~~~---  273 (381)
T cd05626         231 WWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLH----------------------------------IPPQV---  273 (381)
T ss_pred             eeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccC----------------------------------CCCCC---
Confidence            99999999999999999998877665555532110000                                  00000   


Q ss_pred             hhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc--cCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        376 TILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT--YDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~--~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                                            .....+.+||.+||.  .+|..|+|+.+++.||||++..+
T Consensus       274 ----------------------~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         274 ----------------------KLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             ----------------------CCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCCh
Confidence                                  001157899999664  45556999999999999987543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.6e-45  Score=353.82  Aligned_cols=243  Identities=30%  Similarity=0.487  Sum_probs=198.2

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||+||+|.+..+++.||+|++....    ........|+.++..+     .||||+++++++...+..++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCC
Confidence            699999999999999999999999986421    1223344566666554     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---Cc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QT  269 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---~~  269 (437)
                      ++ +|.+++...  ..+++..+..++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++....   ..
T Consensus        76 ~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~i~HrDlkp~Nili--~~~~~~kl~Dfg~~~~~~~~~~~  149 (312)
T cd05585          76 NGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHK--FNVIYRDLKPENILL--DYQGHIALCDFGLCKLNMKDDDK  149 (312)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHeEE--CCCCcEEEEECcccccCccCCCc
Confidence            65 788888764  358999999999999999999995  489999999999999  778899999999987532   22


Q ss_pred             cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcc
Q psy11727        270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDR  349 (437)
Q Consensus       270 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  349 (437)
                      ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+....-..|                
T Consensus       150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----------------  213 (312)
T cd05585         150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----------------  213 (312)
T ss_pred             cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----------------
Confidence            2346789999999999999999999999999999999999999998877666555432100000                


Q ss_pred             cCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC---CHHHHhc
Q psy11727        350 LSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI---SPTNVLR  426 (437)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~---t~~e~l~  426 (437)
                                                                     ......+.+||.+||+.||.+||   ++.+++.
T Consensus       214 -----------------------------------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         214 -----------------------------------------------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             -----------------------------------------------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence                                                           00011578999999999999997   5899999


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||.+..
T Consensus       247 hp~~~~~~  254 (312)
T cd05585         247 HPFFSQLS  254 (312)
T ss_pred             CCCcCCCC
Confidence            99998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=9e-45  Score=354.36  Aligned_cols=246  Identities=29%  Similarity=0.461  Sum_probs=198.3

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||+|.+..+++.||+|+++....    .......|..++...    ..|++|++++++|.+.+++|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA----WENPFLTHLYCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCCccCeeEEEEeCCEEEEEEC
Confidence            468999999999999999999999999974321    122333444444332    378999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+.+ +|.+++...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.++|+|||++...   .
T Consensus        77 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nil~--~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05620          77 FLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHS--KGIIYRDLKLDNVML--DRDGHIKIADFGMCKENVFGD  150 (316)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEE--CCCCCEEeCccCCCeecccCC
Confidence            9965 788887664  358999999999999999999995  489999999999999  67888999999998643   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||..|+|||++.+..++.++|||||||++|||++|..||.+.+.......+.......|.+            
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~------------  218 (316)
T cd05620         151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRW------------  218 (316)
T ss_pred             CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC------------
Confidence            23345678999999999999999999999999999999999999999888766655553211000000            


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH-HHHhc
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP-TNVLR  426 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~-~e~l~  426 (437)
                                                                         ....+.+||++||+.||.+|+|+ +++++
T Consensus       219 ---------------------------------------------------~~~~~~~li~~~l~~dP~~R~~~~~~~~~  247 (316)
T cd05620         219 ---------------------------------------------------ITKESKDILEKLFERDPTRRLGVVGNIRG  247 (316)
T ss_pred             ---------------------------------------------------CCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence                                                               00157899999999999999997 58889


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||+...
T Consensus       248 h~~f~~~~  255 (316)
T cd05620         248 HPFFKTIN  255 (316)
T ss_pred             CCCcCCCC
Confidence            99998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=8.5e-45  Score=363.74  Aligned_cols=253  Identities=26%  Similarity=0.439  Sum_probs=202.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +|++++.||+|+||+||+|++..+++.||+|++....    .....+..|+.++..+     .|+|||++++.|.+.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-----~h~~iv~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-----CCCcCCeEEEEEEeCCEE
Confidence            6899999999999999999999999999999996432    1223455677777665     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~--~~ivHrDlKp~NILl--~~~g~~kL~DFGla~~  150 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHK--MGFIHRDIKPDNILI--DRDGHIKLTDFGLCTG  150 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--CCCCCEEEeECCCCcc
Confidence            999999965 788888664  358999999999999999999995  489999999999999  7788999999999742


Q ss_pred             cCC--------------------------------------------------ccccccccccccChhhhcCCCCCCcch
Q psy11727        266 VGQ--------------------------------------------------TLYQYIQSRYYRSPEVLLGIPYDLAID  295 (437)
Q Consensus       266 ~~~--------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D  295 (437)
                      ...                                                  ...+.+||+.|+|||++.+..++.++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D  230 (382)
T cd05625         151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD  230 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeee
Confidence            210                                                  012346899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchh
Q psy11727        296 MWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD  375 (437)
Q Consensus       296 vwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (437)
                      ||||||++|||++|++||.+.+..+....+.......+                                  .|...   
T Consensus       231 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------~p~~~---  273 (382)
T cd05625         231 WWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLH----------------------------------IPPQA---  273 (382)
T ss_pred             EEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcC----------------------------------CCCcc---
Confidence            99999999999999999998887666555543110000                                  00000   


Q ss_pred             hhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---HHHHhcCCCcCcCC
Q psy11727        376 TILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---PTNVLRHEFFLKHS  434 (437)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---~~e~l~Hp~~~~~~  434 (437)
                                            .....+.+||.+|+ .||.+|++   ++++++||||+..+
T Consensus       274 ----------------------~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         274 ----------------------KLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             ----------------------cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence                                  00115689999986 59999998   99999999998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=9.3e-45  Score=354.96  Aligned_cols=247  Identities=27%  Similarity=0.400  Sum_probs=201.5

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      ++||+|+||+||+|++..+++.||+|+++...    ........|..++..+    ..||||++++++|.+.+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~----~~hp~i~~~~~~~~~~~~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALA----AKHPFLTALHCCFQTKDRLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhc----cCCCCccceeeEEEcCCeEEEEEe
Confidence            46899999999999999999999999997432    1122334455555543    278999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|...+...  ..+++..+..++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++....   
T Consensus        77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDikp~Nill--~~~~~~kL~Dfg~~~~~~~~~  150 (321)
T cd05591          77 YVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH--GVIYRDLKLDNILL--DAEGHCKLADFGMCKEGILNG  150 (321)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHeEE--CCCCCEEEeecccceecccCC
Confidence            9965 788777654  3589999999999999999999964  89999999999999  678899999999987532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.......|.+            
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~------------  218 (321)
T cd05591         151 VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVW------------  218 (321)
T ss_pred             ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC------------
Confidence            22334678999999999999999999999999999999999999999998877777664421111100            


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-------C
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-------S  420 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-------t  420 (437)
                                                                         ....+.+||.+||+.||.+|+       +
T Consensus       219 ---------------------------------------------------~~~~~~~ll~~~L~~dp~~R~~~~~~~~~  247 (321)
T cd05591         219 ---------------------------------------------------LSKEAVSILKAFMTKNPNKRLGCVASQGG  247 (321)
T ss_pred             ---------------------------------------------------CCHHHHHHHHHHhccCHHHcCCCCCCCCC
Confidence                                                               001578999999999999999       9


Q ss_pred             HHHHhcCCCcCcCCC
Q psy11727        421 PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~  435 (437)
                      ++++++||||....+
T Consensus       248 ~~~~~~hp~~~~~~~  262 (321)
T cd05591         248 EDAIKQHPFFKEIDW  262 (321)
T ss_pred             HHHHhcCCccCCCCH
Confidence            999999999987643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=9.3e-45  Score=356.09  Aligned_cols=245  Identities=29%  Similarity=0.441  Sum_probs=198.3

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||+|++....    ........|+.++..+     .||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-----RHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    1123344566665544     78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|.+.+...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++....   
T Consensus        76 y~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDikp~NIll--~~~~~~kL~DfG~~~~~~~~~  149 (328)
T cd05593          76 YVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG--KIVYRDLKLENLML--DKDGHIKITDFGLCKEGITDA  149 (328)
T ss_pred             CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--CeEecccCHHHeEE--CCCCcEEEecCcCCccCCCcc
Confidence            9965 787777654  3589999999999999999999964  89999999999999  678899999999986532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+.......|              
T Consensus       150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p--------------  215 (328)
T cd05593         150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP--------------  215 (328)
T ss_pred             cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC--------------
Confidence            222346789999999999999999999999999999999999999988776655544421100000              


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                            .                           .....+.+||++||+.||.+|+     |+.
T Consensus       216 ----------------------~---------------------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  246 (328)
T cd05593         216 ----------------------R---------------------------TLSADAKSLLSGLLIKDPNKRLGGGPDDAK  246 (328)
T ss_pred             ----------------------C---------------------------CCCHHHHHHHHHHcCCCHHHcCCCCCCCHH
Confidence                                  0                           0011578999999999999997     899


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++++||||+...
T Consensus       247 ~il~h~~~~~~~  258 (328)
T cd05593         247 EIMRHSFFTGVN  258 (328)
T ss_pred             HHhcCCCcCCCC
Confidence            999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.3e-44  Score=353.13  Aligned_cols=246  Identities=29%  Similarity=0.428  Sum_probs=197.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||+|.+..+++.||+|+++....    .......|..++..    ...||||+++++++...+++|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~----~~~hp~i~~~~~~~~~~~~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLAL----AWEHPFLTHLFCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh----ccCCCCccceeeEEEcCCEEEEEEc
Confidence            468999999999999999999999999974321    11222334433332    2379999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |++| +|.+++...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++....   
T Consensus        77 ~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dlkp~Nill--~~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592          77 YLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHK--KGIIYRDLKLDNVLL--DKDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHeEE--CCCCCEEEccCcCCeECCCCC
Confidence            9965 788887664  358999999999999999999996  489999999999999  678889999999997542   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+.......|.             
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------  217 (316)
T cd05592         151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR-------------  217 (316)
T ss_pred             CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC-------------
Confidence            2233467899999999999999999999999999999999999999998877666655321100000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH-HHHhc
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP-TNVLR  426 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~-~e~l~  426 (437)
                                                                        .....+.+||.+||+.||.+|||+ +++++
T Consensus       218 --------------------------------------------------~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         218 --------------------------------------------------WISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             --------------------------------------------------CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence                                                              000156899999999999999986 58889


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||....
T Consensus       248 h~~~~~~~  255 (316)
T cd05592         248 HPFFRGID  255 (316)
T ss_pred             CcccCCCC
Confidence            99998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.2e-44  Score=354.51  Aligned_cols=245  Identities=27%  Similarity=0.431  Sum_probs=199.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||++.+..+|..||+|+++...    ........|+.++..+     .||||++++++|...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCEEEEEEe
Confidence            46899999999999999999999999997432    1122334566666554     78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|..++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++....   
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kL~Dfg~~~~~~~~~  149 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR--DVVYRDIKLENLML--DKDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEecCCCHHHEEE--cCCCCEEecccHHhccccCCC
Confidence            9965 7877776543  589999999999999999999954  89999999999999  678889999999986532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+.......|.             
T Consensus       150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~-------------  216 (323)
T cd05595         150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR-------------  216 (323)
T ss_pred             CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC-------------
Confidence            1223467899999999999999999999999999999999999999888776665555321100000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                                                        .....+.+||.+||+.||.+|+     ++.
T Consensus       217 --------------------------------------------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  246 (323)
T cd05595         217 --------------------------------------------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAK  246 (323)
T ss_pred             --------------------------------------------------CCCHHHHHHHHHHccCCHHHhCCCCCCCHH
Confidence                                                              0011578999999999999998     899


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++++||||.+..
T Consensus       247 ~~l~h~~~~~~~  258 (323)
T cd05595         247 EVMEHRFFLSIN  258 (323)
T ss_pred             HHHcCCCcCCCC
Confidence            999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=5.3e-45  Score=357.94  Aligned_cols=256  Identities=25%  Similarity=0.402  Sum_probs=205.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|.+.+.||+|+||+||+|.+..+++.||+|+++....    ....+..|+.++..+     .|+||+++++++.+.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~~~~i~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-----NSPWIPQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCe
Confidence            469999999999999999999999999999999974322    223445566665543     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+++ +|.+++.... ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~--~~i~H~Dlkp~NIll--~~~~~~kL~Dfg~a~  150 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQ--MGYVHRDIKPENVLI--DRTGHIKLADFGSAA  150 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH--CCeEcccCchHheEE--CCCCCEEeccCCCCe
Confidence            9999999955 8888887653 468999999999999999999995  489999999999999  778899999999997


Q ss_pred             ecCCcc----ccccccccccChhhhc------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        265 HVGQTL----YQYIQSRYYRSPEVLL------GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       265 ~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ......    ....||+.|+|||++.      +..++.++|||||||++|+|++|..||.+.+....+..+........ 
T Consensus       151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-  229 (330)
T cd05601         151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK-  229 (330)
T ss_pred             ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC-
Confidence            654321    2346899999999997      45678999999999999999999999998887766666543210000 


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                       .|..                         ......+.+||++||. |
T Consensus       230 ---------------------------------~~~~-------------------------~~~~~~~~~li~~ll~-~  250 (330)
T cd05601         230 ---------------------------------FPED-------------------------PKVSSDFLDLIQSLLC-G  250 (330)
T ss_pred             ---------------------------------CCCC-------------------------CCCCHHHHHHHHHHcc-C
Confidence                                             0000                         0001257899999998 9


Q ss_pred             CCCCCCHHHHhcCCCcCcCCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      |.+|||++++++||||+...+
T Consensus       251 p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         251 QKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             hhhCCCHHHHhCCCCcCCCCH
Confidence            999999999999999987653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.2e-44  Score=359.03  Aligned_cols=254  Identities=26%  Similarity=0.406  Sum_probs=203.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .||||+++++++.+++
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~~~~~  116 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFCAFQDDK  116 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCC
Confidence            468999999999999999999999999999999986321    1122344566666554     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+||||+++ +|.+++...   .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~--~~IvHrDLKp~NILl--~~~~~~kL~DFG~a  189 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLL--DKHGHLKLADFGTC  189 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEE--CCCCCEEEEecccc
Confidence            99999999965 888888654   47999999999999999999995  489999999999999  67889999999999


Q ss_pred             eecCCc----cccccccccccChhhhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQT----LYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ..+.+||+.|+|||++.+..    ++.++|+|||||++|+|++|.+||.+.+....+..++.....+.  
T Consensus       190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--  267 (370)
T cd05621         190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN--  267 (370)
T ss_pred             eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC--
Confidence            765432    23567999999999997643    78899999999999999999999999887777776654211100  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|..                         ......+++||.+||..+|
T Consensus       268 --------------------------------~p~~-------------------------~~~s~~~~~li~~~L~~~~  290 (370)
T cd05621         268 --------------------------------FPED-------------------------VEISKHAKNLICAFLTDRE  290 (370)
T ss_pred             --------------------------------CCCc-------------------------ccCCHHHHHHHHHHccCch
Confidence                                            0000                         0001156899999998655


Q ss_pred             CC--CCCHHHHhcCCCcCcC
Q psy11727        416 KK--RISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~  433 (437)
                      .+  |+|+.|+++||||+..
T Consensus       291 ~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         291 VRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             hccCCCCHHHHhcCcccCCC
Confidence            43  8999999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7.9e-44  Score=349.92  Aligned_cols=299  Identities=25%  Similarity=0.363  Sum_probs=212.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||.||++++..++..||+|++....  .....+..|+.++..+     .|+||+++++++...+.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECCEE
Confidence            468999999999999999999999999999999987432  2234566787777766     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++....  .+++..+..++.|++.||.|||+. .+|+||||||+|||+  +.++.+||+|||++..
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-~~ivH~dlkp~Nil~--~~~~~~kl~Dfg~~~~  153 (331)
T cd06649          79 SICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREK-HQIMHRDVKPSNILV--NSRGEIKLCDFGVSGQ  153 (331)
T ss_pred             EEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhc-CCEEcCCCChhhEEE--cCCCcEEEccCccccc
Confidence            999999965 8888887653  589999999999999999999964 369999999999999  6788899999999876


Q ss_pred             cCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        266 VGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       266 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      .... .....|+..|+|||++.+..++.++|+|||||++|||++|+.||...+..+....    ++.+........... 
T Consensus       154 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~-  228 (331)
T cd06649         154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI----FGRPVVDGEEGEPHS-  228 (331)
T ss_pred             ccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----hcccccccccCCccc-
Confidence            5332 2345789999999999999999999999999999999999999987765443222    222211100000000 


Q ss_pred             hhhcccCCCcceeccccc-cccccCCCCC--chhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        345 KYFDRLSDNSYVLKKSTD-TRKERLPGSK--RLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                           ............. ......+...  .+.+.+....  +    ...+  .......+++||.+||++||++|||+
T Consensus       229 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~--~~~~~~~l~~li~~~L~~~P~~Rpt~  295 (331)
T cd06649         229 -----ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEP--P----PKLP--NGVFTPDFQEFVNKCLIKNPAERADL  295 (331)
T ss_pred             -----cCcccccccccccccccccccchhHHHHHHHHHhCC--C----cCCC--CccccHHHHHHHHHHccCCcccCCCH
Confidence                 0000000000000 0000000000  0001000000  0    0000  00112368999999999999999999


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      .++++||||+....
T Consensus       296 ~ell~h~~~~~~~~  309 (331)
T cd06649         296 KMLMNHTFIKRSEV  309 (331)
T ss_pred             HHHhcChHHhhccc
Confidence            99999999987643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.4e-44  Score=358.90  Aligned_cols=255  Identities=26%  Similarity=0.393  Sum_probs=205.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++....    .....+..|+.++..+     .||||+++++++.+.+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-----~h~~iv~~~~~~~~~~  116 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-----NSEWIVQLHYAFQDDK  116 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEEecCC
Confidence            568999999999999999999999999999999996321    1122344566666654     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+||||+++ +|.+++...   .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDLkp~NILl--~~~~~~kL~DfG~~  189 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL--DKSGHLKLADFGTC  189 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHEEE--cCCCCEEEEeccce
Confidence            99999999965 788887654   478999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCCc----cccccccccccChhhhcCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQT----LYQYIQSRYYRSPEVLLGI----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ....+||+.|+|||++.+.    .++.++|||||||++|||++|.+||.+.+....+..+........  
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~--  267 (370)
T cd05596         190 MKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT--  267 (370)
T ss_pred             eeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC--
Confidence            765432    2346789999999999754    478999999999999999999999999887777666643211000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|...                         .....+.+||++||+.+|
T Consensus       268 --------------------------------~~~~~-------------------------~~s~~~~~li~~~L~~~p  290 (370)
T cd05596         268 --------------------------------FPDDI-------------------------EISKQAKDLICAFLTDRE  290 (370)
T ss_pred             --------------------------------CCCcC-------------------------CCCHHHHHHHHHHccChh
Confidence                                            00000                         001257899999999999


Q ss_pred             CC--CCCHHHHhcCCCcCcCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~  434 (437)
                      .+  |+|++++++||||++..
T Consensus       291 ~r~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         291 VRLGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             hccCCCCHHHHhcCcccCCCC
Confidence            98  99999999999998743

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.3e-44  Score=350.42  Aligned_cols=247  Identities=29%  Similarity=0.457  Sum_probs=198.7

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||||+++...    ........|..++...    ..||||+++++++.+.+.+++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHLYCTFQTKENLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCcCcceEEEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    1122333444444332    489999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|.+++...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++....   
T Consensus        77 y~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~--~~ivHrdikp~Nil~--~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05619          77 YLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHS--KGIVYRDLKLDNILL--DTDGHIKIADFGMCKENMLGD  150 (316)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEE--CCCCCEEEccCCcceECCCCC
Confidence            9965 888888764  358999999999999999999996  489999999999999  678889999999987532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......||..|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+.......|.+            
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~------------  218 (316)
T cd05619         151 AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRW------------  218 (316)
T ss_pred             CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc------------
Confidence            22335678999999999999999999999999999999999999999887766655543210000000            


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH-HHhc
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT-NVLR  426 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~-e~l~  426 (437)
                                                                         ....+.+||.+||+.||.+||++. ++++
T Consensus       219 ---------------------------------------------------~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         219 ---------------------------------------------------LTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             ---------------------------------------------------CCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence                                                               001568999999999999999996 8999


Q ss_pred             CCCcCcCCC
Q psy11727        427 HEFFLKHSV  435 (437)
Q Consensus       427 Hp~~~~~~~  435 (437)
                      ||||+...+
T Consensus       248 h~~~~~~~~  256 (316)
T cd05619         248 HPFFREIDW  256 (316)
T ss_pred             CcccCCCCH
Confidence            999988653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.3e-44  Score=361.55  Aligned_cols=254  Identities=25%  Similarity=0.420  Sum_probs=203.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|++..+++.||||++....    .....+..|+.++..+     .|+||+++++.|.++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-----DNEWVVKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCE
Confidence            36999999999999999999999999999999986321    1234456677777766     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+++ +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill--~~~~~ikL~DFG~a~  149 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILI--DRDGHIKLTDFGLCT  149 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHEEE--CCCCCEEEEeCCCCc
Confidence            9999999965 8888887653  58999999999999999999995  489999999999999  678899999999974


Q ss_pred             ecCC----------------------------------------------ccccccccccccChhhhcCCCCCCcchHHH
Q psy11727        265 HVGQ----------------------------------------------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWS  298 (437)
Q Consensus       265 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS  298 (437)
                      ....                                              .....+||+.|+|||++.+..++.++||||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  229 (376)
T cd05598         150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  229 (376)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeee
Confidence            2210                                              011347899999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhh
Q psy11727        299 LGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTIL  378 (437)
Q Consensus       299 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (437)
                      |||++|||++|++||.+.+..+....+.......                                  ..|...      
T Consensus       230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------~~~~~~------  269 (376)
T cd05598         230 VGVILYEMLVGQPPFLADTPAETQLKVINWETTL----------------------------------HIPSQA------  269 (376)
T ss_pred             ccceeeehhhCCCCCCCCCHHHHHHHHhccCccc----------------------------------cCCCCC------
Confidence            9999999999999999888766555443210000                                  000000      


Q ss_pred             ccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC---CHHHHhcCCCcCcCC
Q psy11727        379 GVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI---SPTNVLRHEFFLKHS  434 (437)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~---t~~e~l~Hp~~~~~~  434 (437)
                                         .....+.+||.+|+ .+|.+|+   |+.++++||||++..
T Consensus       270 -------------------~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         270 -------------------KLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             -------------------CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence                               00114689999977 5999999   999999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.7e-44  Score=355.89  Aligned_cols=278  Identities=22%  Similarity=0.314  Sum_probs=207.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+|++.+.||+|+||.||+|.+..+++.||+|+....     ....|+.++..+     .|+||+++++++...+..++|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV-----NHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC-----CCCCCcChhheEEeCCeeEEE
Confidence            4699999999999999999999999999999986432     234577777665     789999999999999999999


Q ss_pred             EEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC--
Q psy11727        190 FELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--  267 (437)
Q Consensus       190 ~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~--  267 (437)
                      ||++.++|.+++.... ..+++..++.++.||+.||.|||++  |||||||||+|||+  +..+.+||+|||++....  
T Consensus       136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~Nill--~~~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ--RIIHRDVKTENIFI--NDVDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--CCCCCEEEecCccccccccC
Confidence            9999999999887654 4689999999999999999999964  89999999999999  678889999999987542  


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCC---------HHHHHHHHHHHhCCCChhhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKN---------EVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~---------~~~~~~~i~~~~~~p~~~~~  337 (437)
                      .......||..|+|||++.+..++.++|||||||++|||+++ .++|....         ....+..++..++..|..+.
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  290 (357)
T PHA03209        211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP  290 (357)
T ss_pred             cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence            223356789999999999999999999999999999999985 45555422         12344555555665554433


Q ss_pred             ccCC--ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGAS--KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ....  ....++.....           ..........+.                    .......+.+||.+||++||
T Consensus       291 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~--------------------~~~~~~~~~~li~~mL~~dP  339 (357)
T PHA03209        291 RDPGSRLVRGFIEYASL-----------ERQPYTRYPCFQ--------------------RVNLPIDGEFLVHKMLTFDA  339 (357)
T ss_pred             CCCccHHHHHHHhhccc-----------CCCcccccHHHh--------------------ccCCCchHHHHHHHHHcCCc
Confidence            2111  11111110000           000000000000                    00011245789999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|||+.|+|+||||++.
T Consensus       340 ~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        340 AMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             ccCcCHHHHhcCchhccC
Confidence            999999999999999874

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=9.9e-45  Score=355.39  Aligned_cols=246  Identities=27%  Similarity=0.418  Sum_probs=197.9

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||+|++.....    .......|+.++..     +.|+||++++++|...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~-----~~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-----SRHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-----CCCCCCCceEEEEEcCCEEEEEEe
Confidence            468999999999999999999999999974321    11233345444444     478999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|.+++...  ..+++..++.++.||+.||+|||+. .||+||||||+|||+  +.++.+||+|||++....   
T Consensus        76 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll--~~~~~~kL~Dfg~~~~~~~~~  150 (325)
T cd05594          76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDG  150 (325)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEE--CCCCCEEEecCCCCeecCCCC
Confidence            9965 787777654  3589999999999999999999962 489999999999999  778899999999986532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.......|              
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p--------------  216 (325)
T cd05594         151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--------------  216 (325)
T ss_pred             cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC--------------
Confidence            223346799999999999999999999999999999999999999998877655555432100000              


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                            .                           .....+.+||.+||+.||.+|+     |+.
T Consensus       217 ----------------------~---------------------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  247 (325)
T cd05594         217 ----------------------R---------------------------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAK  247 (325)
T ss_pred             ----------------------C---------------------------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHH
Confidence                                  0                           0011578999999999999997     999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++++||||++..
T Consensus       248 ~il~h~~~~~~~  259 (325)
T cd05594         248 EIMQHKFFAGIV  259 (325)
T ss_pred             HHhcCCCcCCCC
Confidence            999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.8e-44  Score=358.53  Aligned_cols=255  Identities=27%  Similarity=0.446  Sum_probs=204.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|.+..+++.||+|+++...    .....+..|+.++..+     .|++|+++++.|.+.++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-----DGAWVVKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCE
Confidence            46899999999999999999999999999999996321    1223445566666554     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||++| +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.++|+|||++.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~--~givHrDLkp~NIli--~~~~~vkL~DfG~~~  149 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQ--LGFIHRDIKPDNLLL--DAKGHVKLSDFGLCT  149 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEE--CCCCCEEEeeccCCc
Confidence            9999999965 788888764  358999999999999999999995  489999999999999  678899999999986


Q ss_pred             ecCCc--------------------------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHH
Q psy11727        265 HVGQT--------------------------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL  306 (437)
Q Consensus       265 ~~~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el  306 (437)
                      .....                                      ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel  229 (360)
T cd05627         150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM  229 (360)
T ss_pred             ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence            43210                                      1235789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCC
Q psy11727        307 HTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPG  386 (437)
Q Consensus       307 ltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (437)
                      ++|++||.+.+.......+.......                                  ..|..               
T Consensus       230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------~~p~~---------------  260 (360)
T cd05627         230 LIGYPPFCSETPQETYRKVMNWKETL----------------------------------VFPPE---------------  260 (360)
T ss_pred             ccCCCCCCCCCHHHHHHHHHcCCCce----------------------------------ecCCC---------------
Confidence            99999999988777666654310000                                  00000               


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---HHHHhcCCCcCcCCC
Q psy11727        387 GRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---PTNVLRHEFFLKHSV  435 (437)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---~~e~l~Hp~~~~~~~  435 (437)
                              .  .....+.+||.+|+. ||.+|++   ++++++||||++.++
T Consensus       261 --------~--~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~  301 (360)
T cd05627         261 --------V--PISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDW  301 (360)
T ss_pred             --------C--CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCH
Confidence                    0  001256899999874 9999994   899999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.9e-44  Score=350.12  Aligned_cols=247  Identities=29%  Similarity=0.417  Sum_probs=200.7

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..++..||||+++...    ........|..++..+.    .|+||+++++++...+++|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~----~h~~i~~~~~~~~~~~~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG----KHPFLTQLHSCFQTKDRLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999997432    12233445666655543    78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|.+.+...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  ++++.+||+|||++...   .
T Consensus        77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill--~~~~~~kl~Dfg~~~~~~~~~  150 (318)
T cd05570          77 YVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHE--RGIIYRDLKLDNVLL--DSEGHIKIADFGMCKEGILGG  150 (318)
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEccCCCHHHeEE--CCCCcEEecccCCCeecCcCC
Confidence            9965 787777654  358999999999999999999995  489999999999999  67889999999998653   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+|+..|+|||++.+..++.++|+|||||++|+|++|+.||.+.+.......+.......|              
T Consensus       151 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~--------------  216 (318)
T cd05570         151 VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP--------------  216 (318)
T ss_pred             CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--------------
Confidence            223345789999999999999999999999999999999999999998887666555532100000              


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH-----H
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP-----T  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~-----~  422 (437)
                                            .                           .....+.+||++||+.||.+|||+     .
T Consensus       217 ----------------------~---------------------------~~~~~~~~li~~~l~~dP~~R~s~~~~~~~  247 (318)
T cd05570         217 ----------------------R---------------------------WLSKEAKSILKSFLTKNPEKRLGCLPTGEQ  247 (318)
T ss_pred             ----------------------C---------------------------cCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence                                  0                           001157899999999999999999     9


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      +++.||||....+
T Consensus       248 ~ll~~~~~~~~~~  260 (318)
T cd05570         248 DIKGHPFFREIDW  260 (318)
T ss_pred             HHhcCCCcCCCCH
Confidence            9999999987643

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.5e-43  Score=345.23  Aligned_cols=283  Identities=29%  Similarity=0.521  Sum_probs=205.7

Q ss_pred             eceecccCceEEEEEEEcC--CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHE--EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNHLCLVF  190 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~~~lV~  190 (437)
                      ..+||+|+||+||+|....  ++..||+|.+... .......+|+.++..+     .|+||+++++++..  +..+++||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT-GISMSACREIALLREL-----KHPNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCC-CCcHHHHHHHHHHHhC-----CCCCeeeEEEEEeccCCCeEEEEE
Confidence            3579999999999998654  6688999998643 2334567788888876     68999999998854  56889999


Q ss_pred             EeccCcHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--CCCCCEEEEeCC
Q psy11727        191 ELLSYNLYNLIRNTN-------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKIIDFG  261 (437)
Q Consensus       191 E~~~~~L~~~l~~~~-------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--~~~~~ikL~DFG  261 (437)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++  ||+||||||+|||+..  +.++.+||+|||
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC--CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            999999988875321       22478999999999999999999964  8999999999999943  245689999999


Q ss_pred             CceecCCc------cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH
Q psy11727        262 SSCHVGQT------LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQMTKI  325 (437)
Q Consensus       262 ~s~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~---------~~~~~~i  325 (437)
                      ++......      .....+|..|+|||++.+. .++.++|||||||++|||+||.+||....+         ..++..+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~  237 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRI  237 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHH
Confidence            99765432      2235678999999999774 588999999999999999999999976543         2456677


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      ...++.+....+........+.....+  +        ........ .+...+              ..........+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~  292 (317)
T cd07867         238 FSVMGFPADKDWEDIRKMPEYPTLQKD--F--------RRTTYANS-SLIKYM--------------EKHKVKPDSKVFL  292 (317)
T ss_pred             HHhcCCCChhhhhhhhhcccchhhhhh--h--------cccccCCc-hhhhhh--------------hcccCCCChHHHH
Confidence            777777766655443322222111000  0        00000000 000000              0000111225789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        406 LILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ||.+||+.||.+|||+.|+|+||||
T Consensus       293 ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         293 LLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HHHHHhccCcccccCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.7e-44  Score=351.99  Aligned_cols=246  Identities=27%  Similarity=0.434  Sum_probs=196.4

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccc----hHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||+|++.......    .....|...    ....+.||||+++++.+...+.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~----~~~~l~hp~iv~~~~~~~~~~~~~lv~e   76 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNV----LLKNVKHPFLVGLHYSFQTADKLYFVLD   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHH----HHhhCCCCCCCCeeEEEEeCCEEEEEEc
Confidence            46899999999999999999999999996432111    111222221    1234589999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+.+ +|.+++...  ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++....   
T Consensus        77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~givH~dikp~NIll--~~~~~~kl~Dfg~~~~~~~~~  150 (323)
T cd05575          77 YVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS--LNIIYRDLKPENILL--DSQGHVVLTDFGLCKEGIEHS  150 (323)
T ss_pred             CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEE--CCCCcEEEeccCCCcccccCC
Confidence            9965 788887654  358999999999999999999995  489999999999999  678899999999986432   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+....-..+              
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--------------  216 (323)
T cd05575         151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK--------------  216 (323)
T ss_pred             CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC--------------
Confidence            223345789999999999999999999999999999999999999998877666665543100000              


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH----HH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP----TN  423 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~----~e  423 (437)
                                                                   +.    ....+.+||.+||+.||.+||++    .+
T Consensus       217 ---------------------------------------------~~----~~~~~~~li~~~l~~~p~~R~~~~~~~~~  247 (323)
T cd05575         217 ---------------------------------------------PN----ISVSARHLLEGLLQKDRTKRLGAKDDFLE  247 (323)
T ss_pred             ---------------------------------------------CC----CCHHHHHHHHHHhhcCHHhCCCCCCCHHH
Confidence                                                         00    01157899999999999999998    59


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +++||||....
T Consensus       248 il~~~~~~~~~  258 (323)
T cd05575         248 IKNHVFFSSIN  258 (323)
T ss_pred             HHcCCCcCCCC
Confidence            99999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.8e-43  Score=337.70  Aligned_cols=277  Identities=31%  Similarity=0.523  Sum_probs=216.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|++|+||+|.+..++..||+|.++...   ........|+.+++.+     .|+||+++++++.+++.++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-----QHPNIVCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-----CCCCEeeeEEEEeeCCeEE
Confidence            4889999999999999999999999999999986432   2234566788887776     6899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSYNLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||++++|.+++..... ..+++..++.++.||+.||+|||+  .|++||||||+||++  +.++.++|+|||++...
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~--~~~~~~~l~dfg~~~~~  151 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS--RRVLHRDLKPQNLLI--DNKGVIKLADFGLARAF  151 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEE--cCCCcEEECcccceeec
Confidence            9999999999888865432 458999999999999999999995  489999999999999  67888999999998765


Q ss_pred             CCcc---ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....   ....++..|+|||++.+. .++.++|+|||||++|+|+||++||.+.+..+....+....+.+....++....
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T cd07861         152 GIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS  231 (285)
T ss_pred             CCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence            4322   223567889999998764 578999999999999999999999999988888888877777766655544332


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+....+...                ...+...                  .......+.+||++||+.||.+|||+.
T Consensus       232 ~~~~~~~~~~~~----------------~~~~~~~------------------~~~~~~~~~~li~~~l~~dP~~Rpt~~  277 (285)
T cd07861         232 LPDYKNTFPKWK----------------KGSLRSA------------------VKNLDEDGLDLLEKMLIYDPAKRISAK  277 (285)
T ss_pred             hHHHHhhccccC----------------cchhHHh------------------cCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence            222211111000                0000000                  000112568999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      +++.||||
T Consensus       278 ~ll~~~~~  285 (285)
T cd07861         278 KALNHPYF  285 (285)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.7e-44  Score=352.28  Aligned_cols=254  Identities=26%  Similarity=0.437  Sum_probs=198.0

Q ss_pred             CeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      +|++.+.||+|+||+||+|++.   .+++.||+|++....     ........|+.+++.+.    +|++|+++++++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~i~~~~~~~~~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR----QSPFLVTLHYAFQT   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc----CCCCcccEEEEEec
Confidence            4889999999999999999764   478999999986321     12234556777777664    58899999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+++||||+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nili--~~~~~~kl~DfG  150 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHK--LGIVYRDIKLENILL--DSEGHVVLTDFG  150 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHeEE--CCCCCEEEeeCc
Confidence            9999999999965 888888664  358999999999999999999995  489999999999999  678899999999


Q ss_pred             CceecCC----ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChh
Q psy11727        262 SSCHVGQ----TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~p~~~  335 (437)
                      ++.....    .....+||..|+|||++.+. .++.++|||||||++|||++|..||...........+... ....+. 
T Consensus       151 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-  229 (332)
T cd05614         151 LSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP-  229 (332)
T ss_pred             CCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC-
Confidence            9875422    22346789999999999875 4789999999999999999999999754322111111111 000000 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|                           ......+.+||.+||+.||
T Consensus       230 --------------------------------~~---------------------------~~~~~~~~~li~~~l~~dp  250 (332)
T cd05614         230 --------------------------------FP---------------------------SFIGPEAQDLLHKLLRKDP  250 (332)
T ss_pred             --------------------------------CC---------------------------CCCCHHHHHHHHHHcCCCH
Confidence                                            00                           0001257899999999999


Q ss_pred             CCCC-----CHHHHhcCCCcCcCC
Q psy11727        416 KKRI-----SPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~-----t~~e~l~Hp~~~~~~  434 (437)
                      .+||     +++++++||||++..
T Consensus       251 ~~R~~~~~~~~~~~l~h~~~~~~~  274 (332)
T cd05614         251 KKRLGAGPQGASEIKEHPFFKGLD  274 (332)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCCCC
Confidence            9999     889999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=4e-44  Score=351.72  Aligned_cols=190  Identities=26%  Similarity=0.461  Sum_probs=162.3

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      ++||+|+||.||+|.+..+++.||+|+++...    ........|..+++.+.    .||||++++++|.+.+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~----~hp~Iv~~~~~~~~~~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS----NHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc----CCCCCCceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997432    12233456666666553    68999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++...   .
T Consensus        77 ~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nili--~~~~~~kL~Dfg~~~~~~~~~  150 (329)
T cd05588          77 FVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHE--RGIIYRDLKLDNVLL--DAEGHIKLTDYGMCKEGIRPG  150 (329)
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEE--CCCCCEEECcCccccccccCC
Confidence            9965 788777654  358999999999999999999995  489999999999999  67888999999998642   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ......+||+.|+|||++.+..++.++|+|||||++|+|++|++||..
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence            333456899999999999999999999999999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0611|consensus

Probab=100.00  E-value=5.7e-45  Score=343.03  Aligned_cols=250  Identities=31%  Similarity=0.509  Sum_probs=215.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .+..+|++.+.||+|.||.|-+|+....|+.||||.|++.+..    .-.+.+|+.|+..+     .||||+.++++|+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-----NHPhII~IyEVFEN  124 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-----NHPHIIQIYEVFEN  124 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-----CCCceeehhhhhcC
Confidence            3456899999999999999999999999999999999865433    23456788888877     78999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+...|||||.+ |.|++++....  .+++..++.|++||..|+.|+|.+  +++|||||.+|||+  |.++++||+|||
T Consensus       125 kdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn--rVvHRDLKLENILL--D~N~NiKIADFG  198 (668)
T KOG0611|consen  125 KDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN--RVVHRDLKLENILL--DQNNNIKIADFG  198 (668)
T ss_pred             CceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc--cceecccchhheee--cCCCCeeeeccc
Confidence            999999999995 58999998764  599999999999999999999965  79999999999999  889999999999


Q ss_pred             CceecC--CccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVG--QTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ++..+.  .-..++||++-|.+||++.|.+|. +.+|.|||||+||.|+.|..||.|.+...++.+|..+...-      
T Consensus       199 LSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE------  272 (668)
T KOG0611|consen  199 LSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE------  272 (668)
T ss_pred             hhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC------
Confidence            998764  345689999999999999999986 78999999999999999999999999888888885531111      


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                    |.             .|.               ...-||++||-.||++|
T Consensus       273 ------------------------------P~-------------~PS---------------dA~gLIRwmLmVNP~RR  294 (668)
T KOG0611|consen  273 ------------------------------PE-------------TPS---------------DASGLIRWMLMVNPERR  294 (668)
T ss_pred             ------------------------------CC-------------CCc---------------hHHHHHHHHHhcCcccc
Confidence                                          10             000               34679999999999999


Q ss_pred             CCHHHHhcCCCcC
Q psy11727        419 ISPTNVLRHEFFL  431 (437)
Q Consensus       419 ~t~~e~l~Hp~~~  431 (437)
                      .|++++..|=|+.
T Consensus       295 ATieDiAsHWWvN  307 (668)
T KOG0611|consen  295 ATIEDIASHWWVN  307 (668)
T ss_pred             hhHHHHhhhheee
Confidence            9999999998874

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-43  Score=340.78  Aligned_cols=256  Identities=29%  Similarity=0.410  Sum_probs=205.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .|++.+.||+|+||+||++.+..+++.||+|++.....    ....+..|+.+++.+     .|+||+++++.+.+++++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-----CCCCEeeeeeeecCCCeE
Confidence            48899999999999999999999999999999864321    112345577777666     689999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+.+ +|.+++.......+++..+..++.|++.||.|||+.  ||+||||||+||++  ++++.++|+|||++..
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~dlkp~Nil~--~~~~~~~l~Dfg~~~~  151 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE--RIVYRDLKPENILL--DDYGHIRISDLGLAVE  151 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC--CcEecCCCHHHEEE--CCCCCEEEeeCCCcee
Confidence            999999965 787777655445689999999999999999999964  89999999999999  6788899999999976


Q ss_pred             cCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....  ....+|+..|+|||++.+..++.++|+|||||++|+|++|+.||.+.+.......+.......+..        
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------  223 (285)
T cd05605         152 IPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEE--------  223 (285)
T ss_pred             cCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccc--------
Confidence            5322  234578999999999999899999999999999999999999999876654443333221100000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                        +                                                 .......+.+||.+||..||.+||    
T Consensus       224 --~-------------------------------------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05605         224 --Y-------------------------------------------------SEKFSEAARSICRQLLTKDPGFRLGCRG  252 (285)
T ss_pred             --c-------------------------------------------------CcccCHHHHHHHHHHccCCHHHhcCCCC
Confidence              0                                                 000112578999999999999999    


Q ss_pred             -CHHHHhcCCCcCcCC
Q psy11727        420 -SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~  434 (437)
                       |++++++||||.+..
T Consensus       253 ~~~~~l~~~~~~~~~~  268 (285)
T cd05605         253 EGAEEVKAHPFFRTAN  268 (285)
T ss_pred             CCHHHHhcCcCccCCC
Confidence             999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.3e-43  Score=347.31  Aligned_cols=251  Identities=26%  Similarity=0.401  Sum_probs=203.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +|...+.||+|+||+||+|.+..+++.||+|++.....    .......|..++..+.    +|++|+++++++.+.+.+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~i~~~~~~~~~~~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD----KPPFLTQLHSCFQTVDRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc----CCCchhheeeEEecCCEE
Confidence            37788999999999999999999999999999974321    1223444555554442    567899999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+++ +|.+++...  ..+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~--~~ivHrDikp~Nill--~~~~~ikL~Dfg~~~~  150 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHR--RGIIYRDLKLDNVML--DSEGHIKIADFGMCKE  150 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEE--CCCCCEEEeccccccc
Confidence            999999965 788887654  358999999999999999999995  489999999999999  6788999999999875


Q ss_pred             cCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   ......||+.|+|||++.+..++.++|+|||||++|+|++|++||.+.+.......+.......|..       
T Consensus       151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~-------  223 (323)
T cd05615         151 HMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS-------  223 (323)
T ss_pred             cCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc-------
Confidence            422   2234568999999999999999999999999999999999999999988777776665421110000       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC--
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS--  420 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t--  420 (437)
                                                                              ....+.+|+.+||+.||.+|++  
T Consensus       224 --------------------------------------------------------~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         224 --------------------------------------------------------LSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             --------------------------------------------------------CCHHHHHHHHHHcccCHhhCCCCC
Confidence                                                                    0015689999999999999998  


Q ss_pred             ---HHHHhcCCCcCcCC
Q psy11727        421 ---PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ---~~e~l~Hp~~~~~~  434 (437)
                         .+++++||||+...
T Consensus       248 ~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         248 PEGERDIREHAFFRRID  264 (323)
T ss_pred             CCCHHHHhcCcccCCCC
Confidence               57899999999765

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3e-43  Score=348.78  Aligned_cols=293  Identities=32%  Similarity=0.535  Sum_probs=223.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++....   ........|+.+++.+     .|+||++++++|... 
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   88 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-----NHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-----CCCCCcceeeeeccCC
Confidence            4678999999999999999999999999999999986321   1223445677777665     789999999988643 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           .+.|+||||++++|.+.+...    +++..+..++.||+.||+|||++  ||+||||||+||++  +.++.+||+
T Consensus        89 ~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~--gi~H~dlkp~Nil~--~~~~~~kL~  160 (353)
T cd07850          89 SLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKIL  160 (353)
T ss_pred             CccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHEEE--CCCCCEEEc
Confidence                 367999999999998887643    78999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||++.......  ....++..|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+...++.|+..+
T Consensus       161 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  240 (353)
T cd07850         161 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF  240 (353)
T ss_pred             cCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            999997764432  235678899999999999999999999999999999999999999998899999999999998877


Q ss_pred             hccCCccch-hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        337 LHGASKTSK-YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       337 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      +........ +....+...                ...+.++.... ..|..    ....+......+++||.+||++||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~li~~~L~~dP  299 (353)
T cd07850         241 MSRLQPTVRNYVENRPKYA----------------GYSFEELFPDV-LFPPD----SESHNKLKASQARDLLSKMLVIDP  299 (353)
T ss_pred             HHHhhhhhhHHhhcCCCCC----------------CcchhhhCccc-ccCcc----cccccccchhHHHHHHHHHcCCCh
Confidence            665443221 111111000                00000000000 00000    000011122357899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||+.|+|+||||.++.
T Consensus       300 ~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         300 EKRISVDDALQHPYINVWY  318 (353)
T ss_pred             hhCcCHHHHhcChhHhhcc
Confidence            9999999999999998643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0201|consensus

Probab=100.00  E-value=8.5e-46  Score=352.99  Aligned_cols=251  Identities=29%  Similarity=0.437  Sum_probs=206.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..|...+.||+|+||.||+|.+..+++.||+|++....  ......+.|+.++..+     .++||.++++.|..+..++
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-----~~~~it~yygsyl~g~~Lw   87 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-----DSPNITEYYGSYLKGTKLW   87 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-----CcchHHhhhhheeecccHH
Confidence            35777899999999999999999999999999997443  3345667788888776     6689999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||.| ++.++++..+  .+.+..+..++++++.||.|||.+  +.+|||||+.|||+.  ..|.+||+|||.+...
T Consensus        88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~--~kiHrDIKaanil~s--~~g~vkl~DfgVa~ql  161 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSE--KKIHRDIKAANILLS--ESGDVKLADFGVAGQL  161 (467)
T ss_pred             HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhc--ceecccccccceeEe--ccCcEEEEecceeeee
Confidence            99999965 7888887654  248888999999999999999976  699999999999994  5689999999999776


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   ..+++||++|||||++.+..|+.++||||||++.+||++|.||+....+...+..|-+  ..||.         
T Consensus       162 ~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk--~~PP~---------  230 (467)
T KOG0201|consen  162 TNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK--SAPPR---------  230 (467)
T ss_pred             echhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC--CCCCc---------
Confidence            433   2578999999999999988999999999999999999999999998776322222211  00110         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                         .+-.-...|+|||..||+.||+.||||.+
T Consensus       231 ---------------------------------------------------L~~~~S~~~kEFV~~CL~k~P~~RpsA~~  259 (467)
T KOG0201|consen  231 ---------------------------------------------------LDGDFSPPFKEFVEACLDKNPEFRPSAKE  259 (467)
T ss_pred             ---------------------------------------------------cccccCHHHHHHHHHHhhcCcccCcCHHH
Confidence                                                               00000115899999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +|+|+|++..
T Consensus       260 LLKh~FIk~a  269 (467)
T KOG0201|consen  260 LLKHKFIKRA  269 (467)
T ss_pred             HhhhHHHHhc
Confidence            9999999873

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.8e-43  Score=352.92  Aligned_cols=286  Identities=27%  Similarity=0.435  Sum_probs=215.9

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEc--CCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ...+..+|.+.+.||+|+||.||+|...  .++..||+|.+...    ....+|+.+++.+     .|+|||+++++|..
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l-----~h~~iv~~~~~~~~  157 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTI-----SHRAIINLIHAYRW  157 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhc-----CCCCccceeeeEee
Confidence            3344568999999999999999999754  35678999988643    3445788888876     68999999999999


Q ss_pred             CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        183 KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       183 ~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .+.+|+|||++.++|.+++...  ..+++..++.++.||+.||.|||+  .|||||||||+|||+  +.++.++|+|||+
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~--~givHrDlkp~Nill--~~~~~~~l~DfG~  231 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHG--RGIIHRDVKTENIFL--DEPENAVLGDFGA  231 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEE--cCCCCEEEccCcc
Confidence            9999999999999999988443  458999999999999999999995  489999999999999  6788899999999


Q ss_pred             ceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCCh
Q psy11727        263 SCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN---EVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       263 s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~p~~  334 (437)
                      ++.....     .....||..|+|||++.+..|+.++|||||||++|||++|+.||.+..   ....+..+.+.++..+.
T Consensus       232 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~  311 (392)
T PHA03207        232 ACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL  311 (392)
T ss_pred             ccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcc
Confidence            9765432     224578999999999999999999999999999999999999997653   34566777777665554


Q ss_pred             hhhccCCc-cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        335 YLLHGASK-TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       335 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .+...... ....|....   .          ...+... ....+.                .......+.+||++||.+
T Consensus       312 ~~~~~~~~~~~~~~~~~~---~----------~~~~~~~-~~~~~~----------------~~~~~~~~~~li~~ml~~  361 (392)
T PHA03207        312 EFPQNGSTNLCKHFKQYA---I----------VLRPPYT-IPPVIR----------------KYGMHMDVEYLIAKMLTF  361 (392)
T ss_pred             ccCCccchhHHHHHHhhc---c----------cccCCcc-ccchhh----------------ccCcchhHHHHHHHHhcc
Confidence            32211110 001111000   0          0000000 000000                000112578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||++|||+.|+|.||||++...
T Consensus       362 dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        362 DQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             ChhhCCCHHHHhhCchhhccch
Confidence            9999999999999999987544

>KOG0612|consensus

Probab=100.00  E-value=2.8e-45  Score=381.54  Aligned_cols=255  Identities=28%  Similarity=0.423  Sum_probs=216.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecC----CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN----KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~----~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|+++++||+|+||.|.+++.+.|++.||+|++.+    +......+..|..++-.-     +.+|||+++..|++.+
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-----ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-----NSEWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-----CcHHHHHHHHHhcCcc
Confidence            5689999999999999999999999999999999974    234445566677666432     5789999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+||||++| +|..++.+..  .++++++++|+..|..||.-||  ++|+|||||||+||||  |..|+|||+|||.+
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH--~mgyVHRDiKPDNvLl--d~~GHikLADFGsC  222 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLH--SMGYVHRDIKPDNVLL--DKSGHIKLADFGSC  222 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHH--hccceeccCCcceeEe--cccCcEeeccchhH
Confidence            99999999965 7888887654  6999999999999999999999  6899999999999999  89999999999998


Q ss_pred             eecCCc----cccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH---hCC
Q psy11727        264 CHVGQT----LYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV---LGM  331 (437)
Q Consensus       264 ~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~---~~~  331 (437)
                      ..+...    ....+|||.|+|||++..     +.|+..+|+||+||++|||+.|..||+.++-.+++.+|+.-   ++.
T Consensus       223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F  302 (1317)
T KOG0612|consen  223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF  302 (1317)
T ss_pred             HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence            766422    345789999999999963     46899999999999999999999999999999999999874   222


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      |..                                                              ....+..+|||+++|
T Consensus       303 P~~--------------------------------------------------------------~~VSeeakdLI~~ll  320 (1317)
T KOG0612|consen  303 PDE--------------------------------------------------------------TDVSEEAKDLIEALL  320 (1317)
T ss_pred             Ccc--------------------------------------------------------------cccCHHHHHHHHHHh
Confidence            210                                                              001125689999988


Q ss_pred             ccCCCCCCC---HHHHhcCCCcCcCCCCC
Q psy11727        412 TYDPKKRIS---PTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       412 ~~dP~~R~t---~~e~l~Hp~~~~~~~~~  437 (437)
                      . +|..|..   ++++-.||||.+..|+|
T Consensus       321 ~-~~e~RLgrngiedik~HpFF~g~~W~~  348 (1317)
T KOG0612|consen  321 C-DREVRLGRNGIEDIKNHPFFEGIDWDN  348 (1317)
T ss_pred             c-ChhhhcccccHHHHHhCccccCCChhh
Confidence            5 7899998   99999999999998865

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=4.4e-44  Score=350.80  Aligned_cols=250  Identities=25%  Similarity=0.434  Sum_probs=196.2

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      +.||+|+||+||+|.+..+|+.||+|++............+...........+.||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46899999999999999999999999996432111111111111111123345899999999999999999999999965


Q ss_pred             -cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---CCccc
Q psy11727        196 -NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLY  271 (437)
Q Consensus       196 -~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~~~~~  271 (437)
                       +|...+...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++...   .....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~--~givH~Dlkp~NIll--~~~~~~kL~DfG~~~~~~~~~~~~~  154 (325)
T cd05604          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS--INIVYRDLKPENILL--DSQGHVVLTDFGLCKEGIAQSDTTT  154 (325)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEE--CCCCCEEEeecCCcccCCCCCCCcc
Confidence             787777654  358999999999999999999995  489999999999999  77889999999998643   22234


Q ss_pred             cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccC
Q psy11727        272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS  351 (437)
Q Consensus       272 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  351 (437)
                      ..+||..|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+....-..+                  
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~------------------  216 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR------------------  216 (325)
T ss_pred             cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC------------------
Confidence            56789999999999999999999999999999999999999998887666655543100000                  


Q ss_pred             CCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH----HHHhcC
Q psy11727        352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP----TNVLRH  427 (437)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~----~e~l~H  427 (437)
                                                               ++    ....+.++|++||+.||.+||++    .++++|
T Consensus       217 -----------------------------------------~~----~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h  251 (325)
T cd05604         217 -----------------------------------------PG----ASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH  251 (325)
T ss_pred             -----------------------------------------CC----CCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence                                                     00    01156899999999999999987    589999


Q ss_pred             CCcCcCC
Q psy11727        428 EFFLKHS  434 (437)
Q Consensus       428 p~~~~~~  434 (437)
                      |||....
T Consensus       252 ~~f~~~~  258 (325)
T cd05604         252 PFFESLS  258 (325)
T ss_pred             CCcCCCC
Confidence            9998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0666|consensus

Probab=100.00  E-value=1.2e-44  Score=330.99  Aligned_cols=292  Identities=32%  Similarity=0.506  Sum_probs=228.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ...|+++..||+|.||.||+|..+.++.    .+|||.++..+   .....+.+|+.+++.+     .|+|++.+..+|.
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-----~h~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-----KHPNVISLVKVFL   97 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-----cCCcchhHHHHHh
Confidence            4579999999999999999997665543    68999997542   3456788899999988     7899999999998


Q ss_pred             E-CCEEEEEEEeccCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC--CCCCE
Q psy11727        182 W-KNHLCLVFELLSYNLYNLIRNTN---FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP--KRSAI  255 (437)
Q Consensus       182 ~-~~~~~lV~E~~~~~L~~~l~~~~---~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~--~~~~i  255 (437)
                      . +..+++++||.+.+|+..|+..+   .+.++...++.|+.||+.+++|||++  -|+||||||.|||+..+  ++|.|
T Consensus        98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N--WvlHRDLKPaNIlvmgdgperG~V  175 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN--WVLHRDLKPANILVMGDGPERGRV  175 (438)
T ss_pred             ccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh--heeeccCCcceEEEeccCCccCee
Confidence            7 77999999999999999886532   24589999999999999999999975  69999999999999533  45899


Q ss_pred             EEEeCCCceecCCccc------cccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCC---------HH
Q psy11727        256 KIIDFGSSCHVGQTLY------QYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKN---------EV  319 (437)
Q Consensus       256 kL~DFG~s~~~~~~~~------~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~---------~~  319 (437)
                      ||+|||+++.+.....      ..+-|..|+|||.+.|. -|+.++|||++|||+.||+|-+|.|.+..         ..
T Consensus       176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~  255 (438)
T KOG0666|consen  176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH  255 (438)
T ss_pred             EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence            9999999988765433      24568899999999986 59999999999999999999999998753         34


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      +++.+|.+.+|.|...-|+...+...+-+.+++  |.      .. +.  ....|..+.......+           +  
T Consensus       256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~--f~------~~-~~--~n~sL~~~~~~~k~k~-----------~--  311 (438)
T KOG0666|consen  256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSD--FR------RH-YY--DNVSLHKYYHKHKVKD-----------P--  311 (438)
T ss_pred             HHHHHHHHHcCCCccccchhhhhCcchHHHHHH--hH------Hh-hc--CcchHHHHHHHhcCCC-----------c--
Confidence            689999999999999888877665444222221  00      00 00  0011222222111000           0  


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                        ...+|+.+||.+||.+|+|++|||+|+||+.-
T Consensus       312 --~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  312 --SALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             --hHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence              24799999999999999999999999999864

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.2e-43  Score=348.37  Aligned_cols=189  Identities=25%  Similarity=0.460  Sum_probs=160.2

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||+|+++...    ........|+.++..+    ..||||+++++++...+.+++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhc----CCCCcCCceeeEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    1223344565555544    278999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|..++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...   .
T Consensus        77 ~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dikp~Nili--~~~~~~kL~DfG~~~~~~~~~  150 (329)
T cd05618          77 YVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER--GIIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPG  150 (329)
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCHHHEEE--CCCCCEEEeeCCccccccCCC
Confidence            9965 787777654  3589999999999999999999964  89999999999999  67889999999998653   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      .......||..|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence            22345678999999999999999999999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=7.2e-44  Score=349.30  Aligned_cols=251  Identities=27%  Similarity=0.418  Sum_probs=197.1

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      +.||+|+||+||+|++..+++.||+|++............++...+......+.|+||+++++++...+.+|+||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46899999999999999999999999997432111111111111111112345899999999999999999999999966


Q ss_pred             -cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---Cccc
Q psy11727        196 -NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLY  271 (437)
Q Consensus       196 -~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---~~~~  271 (437)
                       +|.+++...  ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++....   ....
T Consensus        81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~giiHrDlkp~Nili--~~~~~~kl~DfG~a~~~~~~~~~~~  154 (325)
T cd05602          81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILL--DSQGHIVLTDFGLCKENIEHNGTTS  154 (325)
T ss_pred             CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEE--CCCCCEEEccCCCCcccccCCCCcc
Confidence             788877654  358899999999999999999995  489999999999999  678889999999986532   2234


Q ss_pred             cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccC
Q psy11727        272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS  351 (437)
Q Consensus       272 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~  351 (437)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+.......+                  
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~------------------  216 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK------------------  216 (325)
T ss_pred             cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC------------------
Confidence            56799999999999999999999999999999999999999999887776666543100000                  


Q ss_pred             CCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH----HHhcC
Q psy11727        352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT----NVLRH  427 (437)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~----e~l~H  427 (437)
                                       +                            .....+.+||.+||+.||.+|+++.    ++++|
T Consensus       217 -----------------~----------------------------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~  251 (325)
T cd05602         217 -----------------P----------------------------NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH  251 (325)
T ss_pred             -----------------C----------------------------CCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcC
Confidence                             0                            0001578999999999999999976    89999


Q ss_pred             CCcCcCCC
Q psy11727        428 EFFLKHSV  435 (437)
Q Consensus       428 p~~~~~~~  435 (437)
                      +||....+
T Consensus       252 ~~~~~~~~  259 (325)
T cd05602         252 IFFSPINW  259 (325)
T ss_pred             cccCCCCH
Confidence            99976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.2e-43  Score=338.52  Aligned_cols=250  Identities=28%  Similarity=0.383  Sum_probs=195.1

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||+||+|.+..+++.||+|.+.....    ....+..|+.++..+     +|+||+++.++|...+++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            6999999999999999999999999864321    123344566666655     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc-
Q psy11727        194 SY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-  269 (437)
Q Consensus       194 ~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~-  269 (437)
                      ++ +|.+.+...  ....+++..+..++.||+.||+|||++  ||+||||||+||++  +.++.++|+|||++...... 
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nili--~~~~~~~l~dfg~~~~~~~~~  151 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR--RIIYRDLKPENVLL--DNDGNVRISDLGLAVELKDGQ  151 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCCEEEeeCccceecCCCC
Confidence            65 777666432  224589999999999999999999964  89999999999999  67888999999999765332 


Q ss_pred             --cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        270 --LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       270 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                        .....||+.|+|||++.+..++.++|+|||||++|+|++|+.||...........+.......+..          + 
T Consensus       152 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~-  220 (280)
T cd05608         152 SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVT----------Y-  220 (280)
T ss_pred             ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCC----------C-
Confidence              224578999999999999999999999999999999999999998765432222221111000000          0 


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                                                      +......+.+|+.+||+.||.+||     |++
T Consensus       221 ------------------------------------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~  252 (280)
T cd05608         221 ------------------------------------------------PDKFSPASKSFCEALLAKDPEKRLGFRDGNCD  252 (280)
T ss_pred             ------------------------------------------------cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence                                                            000012578999999999999999     899


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      ++++||||++..+
T Consensus       253 ~~l~h~~~~~~~~  265 (280)
T cd05608         253 GLRTHPLFRDLNW  265 (280)
T ss_pred             HHhcChhhhcCCH
Confidence            9999999988644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-43  Score=347.49  Aligned_cols=246  Identities=27%  Similarity=0.410  Sum_probs=199.4

Q ss_pred             eceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++.||+|+||.||+|.+.   .+++.||+|+++...     ........|+.+++.+     .||||++++++|..++.+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-----KHPFIVDLIYAFQTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-----CCCchhceeeEEecCCeE
Confidence            367999999999999864   478899999986422     1123345677777765     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+++ +|.+.+....  .+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~--~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          76 YLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQ--QGIIYRDLKPENILL--DAQGHVKLTDFGLCKE  149 (323)
T ss_pred             EEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEE--CCCCCEEEeeCcCCee
Confidence            999999966 7888887653  57899999999999999999995  489999999999999  6788999999999864


Q ss_pred             cC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..   .......||+.|+|||++.+..++.++|||||||++|||++|++||.+.+....+..+.......|.        
T Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~--------  221 (323)
T cd05584         150 SIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP--------  221 (323)
T ss_pred             cccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            32   2223457899999999999989999999999999999999999999988876666555431100000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC---
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI---  419 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~---  419 (437)
                                                                             .....+.+||.+||+.||.+||   
T Consensus       222 -------------------------------------------------------~~~~~~~~li~~~l~~~p~~R~~~~  246 (323)
T cd05584         222 -------------------------------------------------------YLTPEARDLLKKLLKRNPSSRLGAG  246 (323)
T ss_pred             -------------------------------------------------------CCCHHHHHHHHHHcccCHhHcCCCC
Confidence                                                                   0011578999999999999999   


Q ss_pred             --CHHHHhcCCCcCcCC
Q psy11727        420 --SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 --t~~e~l~Hp~~~~~~  434 (437)
                        +++++++||||....
T Consensus       247 ~~~~~~l~~h~~~~~~~  263 (323)
T cd05584         247 PGDAAEVQSHPFFRHVN  263 (323)
T ss_pred             CCCHHHHhcCCCcCCCC
Confidence              899999999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.3e-43  Score=351.95  Aligned_cols=255  Identities=26%  Similarity=0.395  Sum_probs=202.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .||||+++++++.+.+
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~~~~~  116 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEcCC
Confidence            578999999999999999999999999999999986321    1112334566665554     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+||||+++ +|.+++...   .+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NIll--~~~~~ikL~DfG~a  189 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTC  189 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHEEE--CCCCCEEEEeCCce
Confidence            99999999965 788887654   38999999999999999999995  489999999999999  67889999999999


Q ss_pred             eecCCc----cccccccccccChhhhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQT----LYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ....+||+.|+|||++.+..    ++.++|||||||++|||++|.+||.+.+.......++......+  
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--  267 (371)
T cd05622         190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT--  267 (371)
T ss_pred             eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc--
Confidence            765432    23467999999999997643    78999999999999999999999999888777766654211100  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|...                         .....+.+||.+||..+|
T Consensus       268 --------------------------------~~~~~-------------------------~~s~~~~~li~~~L~~~~  290 (371)
T cd05622         268 --------------------------------FPDDN-------------------------DISKEAKNLICAFLTDRE  290 (371)
T ss_pred             --------------------------------CCCcC-------------------------CCCHHHHHHHHHHcCChh
Confidence                                            00000                         001257899999998444


Q ss_pred             CC--CCCHHHHhcCCCcCcCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~  434 (437)
                      .+  |++++++++||||++..
T Consensus       291 ~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         291 VRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             hhcCCCCHHHHhcCcccCCCC
Confidence            33  78999999999998743

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=5.2e-43  Score=344.44  Aligned_cols=297  Identities=25%  Similarity=0.337  Sum_probs=210.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||.||+|.+..++..+|+|++....  .....+..|+.++..+     .|+||++++++|.+.+++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   78 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGEI   78 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCcccceeEEEEECCEE
Confidence            468999999999999999999999999999999987432  2234566788887776     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+.+ +|.+++....  .+++..+..++.|++.||.|||+. .+|+||||||+|||+  +.++.+||+|||++..
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~-~~ivH~dlkp~Nili--~~~~~~kL~Dfg~~~~  153 (333)
T cd06650          79 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILV--NSRGEIKLCDFGVSGQ  153 (333)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChhhEEE--cCCCCEEEeeCCcchh
Confidence            999999965 8998887643  488999999999999999999963 379999999999999  6778899999999875


Q ss_pred             cCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChhhhccCCcc
Q psy11727        266 VGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~p~~~~~~~~~~~  343 (437)
                      .... .....|+..|+|||++.+..++.++|+|||||++|+|++|+.||......+....+... .+.+.......... 
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  232 (333)
T cd06650         154 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR-  232 (333)
T ss_pred             hhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC-
Confidence            5332 23457899999999999989999999999999999999999999876653332221111 11111100000000 


Q ss_pred             chhhcccCCCcceeccccccccccCCCCC--chhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSK--RLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                           .....   +..   ......|...  .+.+.+...  .+...    +  .......+.+||.+||++||.+|||+
T Consensus       233 -----~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~----~--~~~~~~~~~~li~~~L~~~P~~Rpt~  293 (333)
T cd06650         233 -----PPGRP---LSS---YGPDSRPPMAIFELLDYIVNE--PPPKL----P--SGVFGAEFQDFVNKCLIKNPAERADL  293 (333)
T ss_pred             -----Cccch---hhh---hcccccccccHHHHHHHHhcC--CCccC----C--CCCcCHHHHHHHHHhccCCcccCcCH
Confidence                 00000   000   0000000000  000100000  00000    0  00112358999999999999999999


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      .|+++||||+....
T Consensus       294 ~ell~h~~~~~~~~  307 (333)
T cd06650         294 KQLMVHAFIKRSEA  307 (333)
T ss_pred             HHHhhCHHHhcCcc
Confidence            99999999987643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.9e-43  Score=337.67  Aligned_cols=256  Identities=29%  Similarity=0.435  Sum_probs=201.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .|++.+.||+|+||+||+|.+..+++.||+|.+......    ......|+.++..+     .|++|+.+++.+.+.+++
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-----CCCCeeeeeEEEecCCEE
Confidence            377889999999999999999999999999998643211    12344577776665     688999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+.+ +|.+++.......+++..+..++.|++.||.|||+  .||+||||||+||++  ++++.++|+|||++..
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nil~--~~~~~~~l~Dfg~~~~  151 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ--ERIVYRDLKPENILL--DDHGHIRISDLGLAVH  151 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEE--CCCCCEEEeeccceee
Confidence            999999965 78888865554568999999999999999999995  489999999999999  6788899999999876


Q ss_pred             cCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...  ......|+..|+|||++.+..++.++|+|||||++|+|++|++||.+.................+..        
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--------  223 (285)
T cd05630         152 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE--------  223 (285)
T ss_pred             cCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhh--------
Confidence            532  2234578999999999999999999999999999999999999998754321111111100000000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---  420 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---  420 (437)
                        +.                                                 ......+.+||.+||+.||.+|||   
T Consensus       224 --~~-------------------------------------------------~~~~~~~~~li~~~l~~~p~~R~s~~~  252 (285)
T cd05630         224 --YS-------------------------------------------------EKFSPDARSLCKMLLCKDPKERLGCQG  252 (285)
T ss_pred             --cC-------------------------------------------------ccCCHHHHHHHHHHhhcCHHHccCCCC
Confidence              00                                                 000114789999999999999999   


Q ss_pred             --HHHHhcCCCcCcCC
Q psy11727        421 --PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 --~~e~l~Hp~~~~~~  434 (437)
                        ++|+++||||++..
T Consensus       253 ~~~~~~~~h~~~~~~~  268 (285)
T cd05630         253 GGAREVKEHPLFKQIN  268 (285)
T ss_pred             CchHHHHcChhhhccC
Confidence              99999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=5.9e-43  Score=335.46  Aligned_cols=276  Identities=32%  Similarity=0.529  Sum_probs=213.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.++...   ........|+.+++.+     .|+||+++++++.+.+.++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-----CCCCeeeHHHHhccCCceE
Confidence            5889999999999999999999999999999986432   2224456688887776     6899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +|+||++++|.+++.... ..+++..++.++.||+.||.|||+  .||+||||||+||++  +.++.++|+|||++....
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dl~~~nil~--~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHS--HNVLHRDLKPQNLLI--NKNGELKLADFGLARAFG  150 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEE--cCCCcEEECccchhhccC
Confidence            999999999998887643 458999999999999999999995  489999999999999  667889999999987654


Q ss_pred             Ccc---ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL---YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPL-FSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   ....++..|+|||++.+. .++.++|+|||||++|+|++|..| |.+.+..+.+..+....+.++...++....
T Consensus       151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence            322   234568899999998775 478999999999999999998765 677777788888888877776554432221


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+ ....               ..+....+...                  .......+.+||.+||+.||.+|||++
T Consensus       231 ~~~~-~~~~---------------~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~P~~R~t~~  276 (284)
T cd07839         231 LPDY-KPYP---------------MYPATTSLVNV------------------VPKLNSTGRDLLQNLLVCNPVQRISAE  276 (284)
T ss_pred             cccc-cccC---------------CCCCcchhhhh------------------cccCCHHHHHHHHHHhcCChhhcCCHH
Confidence            1110 0000               00000000000                  000112578999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      ++++||||
T Consensus       277 ~il~h~~f  284 (284)
T cd07839         277 EALQHPYF  284 (284)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.5e-43  Score=346.31  Aligned_cols=247  Identities=28%  Similarity=0.451  Sum_probs=194.8

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccc----hHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      ++||+|+||+||+|++..+++.||+|++.......    .....|...    ....+.|+||++++++|.+.+..|+|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~----~l~~~~h~~iv~~~~~~~~~~~~~lv~e   76 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNV----LLKNLKHPFLVGLHYSFQTAEKLYFVLD   76 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHH----HHHhCCCCCccceeeEEEcCCEEEEEEc
Confidence            46899999999999999999999999996432111    111222221    1234589999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---  267 (437)
                      |+++ +|...+...  ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++....   
T Consensus        77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~~~~~~~~~  150 (321)
T cd05603          77 YVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHS--LNIIYRDLKPENILL--DSQGHVVLTDFGLCKEGVEPE  150 (321)
T ss_pred             CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEE--CCCCCEEEccCCCCccCCCCC
Confidence            9966 787777654  358999999999999999999995  489999999999999  778899999999986532   


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+.......+...   +..             
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~~~-------------  214 (321)
T cd05603         151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---PLQ-------------  214 (321)
T ss_pred             CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---CCC-------------
Confidence            2223457899999999999989999999999999999999999999988766655554321   000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH----HH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP----TN  423 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~----~e  423 (437)
                                          .|                           ......+.++|.+||+.||.+|+++    .+
T Consensus       215 --------------------~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  247 (321)
T cd05603         215 --------------------LP---------------------------GGKTVAACDLLVGLLHKDQRRRLGAKADFLE  247 (321)
T ss_pred             --------------------CC---------------------------CCCCHHHHHHHHHHccCCHhhcCCCCCCHHH
Confidence                                00                           0001156899999999999999976    49


Q ss_pred             HhcCCCcCcCCC
Q psy11727        424 VLRHEFFLKHSV  435 (437)
Q Consensus       424 ~l~Hp~~~~~~~  435 (437)
                      +++||||....+
T Consensus       248 ~~~~~~~~~~~~  259 (321)
T cd05603         248 IKNHVFFSPINW  259 (321)
T ss_pred             HhCCCCcCCCCH
Confidence            999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.2e-43  Score=332.14  Aligned_cols=252  Identities=35%  Similarity=0.525  Sum_probs=205.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHH---HHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA---QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~---~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      |++.+.||+|+||+||+|.+..+++.||+|++..........   ..|+.+++.+     .|+||+++++++.+.+..++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-----RHPNIVQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-----TBTTBCHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-----cccccccccccccccccccc
Confidence            889999999999999999999999999999998654333332   3377777777     58899999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec-
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-  266 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~-  266 (437)
                      |||++.+ +|.+++...  ..+++..+..++.||+.||++||++  ||+|+||||+||++  +.++.++|+|||.+... 
T Consensus        76 v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~--~i~H~dikp~NIl~--~~~~~~~l~Dfg~~~~~~  149 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSK--GIVHRDIKPENILL--DENGEVKLIDFGSSVKLS  149 (260)
T ss_dssp             EEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHT--TEEESSBSGGGEEE--STTSEEEESSGTTTEEST
T ss_pred             ccccccccccccccccc--ccccccccccccccccccccccccc--cccccccccccccc--cccccccccccccccccc
Confidence            9999987 899998843  3489999999999999999999964  89999999999999  67888999999999753 


Q ss_pred             --CCccccccccccccChhhhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 --GQTLYQYIQSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 --~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                        ........++..|+|||++. +..++.++|+||||+++++|++|..||...+..+....+..............    
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----  225 (260)
T PF00069_consen  150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ----  225 (260)
T ss_dssp             STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS----
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc----
Confidence              33344567899999999998 78899999999999999999999999998755555444443322111110000    


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                          +......+.+||.+||+.||.+|||+.+
T Consensus       226 ----------------------------------------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~  253 (260)
T PF00069_consen  226 ----------------------------------------------------SREKSEELRDLIKKMLSKDPEQRPSAEE  253 (260)
T ss_dssp             ----------------------------------------------------HTTSHHHHHHHHHHHSSSSGGGSTTHHH
T ss_pred             ----------------------------------------------------cchhHHHHHHHHHHHccCChhHCcCHHH
Confidence                                                                0000126899999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||||
T Consensus       254 l~~~~~~  260 (260)
T PF00069_consen  254 LLKHPWF  260 (260)
T ss_dssp             HHTSGGG
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0604|consensus

Probab=100.00  E-value=1.8e-44  Score=328.41  Aligned_cols=260  Identities=27%  Similarity=0.404  Sum_probs=212.6

Q ss_pred             ceeccCeeee-ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--
Q psy11727        106 EKFLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--  182 (437)
Q Consensus       106 ~~~~~~y~i~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--  182 (437)
                      ..++++|.+. ++||-|-.|.|..|..+.||+.+|+|++...    ..+.+|+.+.=..+    .|+|||.++++|+.  
T Consensus        57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s----~h~~iV~IidVyeNs~  128 (400)
T KOG0604|consen   57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS----GHPHIVSIIDVYENSY  128 (400)
T ss_pred             ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc----CCCceEEeehhhhhhc
Confidence            3457888885 5799999999999999999999999999743    45666777654443    78999999999864  


Q ss_pred             --CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEEE
Q psy11727        183 --KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKII  258 (437)
Q Consensus       183 --~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL~  258 (437)
                        ...+.+|||.|.| .|+..+...+...+++..+..|++||+.|+.|||+  ++|.||||||+|+|.++. .+..+||+
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~--~nIAHRDlKpENLLyt~t~~na~lKLt  206 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS--MNIAHRDLKPENLLYTTTSPNAPLKLT  206 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh--cchhhccCChhheeeecCCCCcceEec
Confidence              4689999999955 79999999888889999999999999999999996  469999999999999643 34569999


Q ss_pred             eCCCceecC--CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCC
Q psy11727        259 DFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV----DQMTKIIEVLGMP  332 (437)
Q Consensus       259 DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~----~~~~~i~~~~~~p  332 (437)
                      |||+|+...  ....+.|-|++|.|||++....|+..+|+||+|||+|-|++|.|||.+....    .+..+|..+    
T Consensus       207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g----  282 (400)
T KOG0604|consen  207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG----  282 (400)
T ss_pred             ccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc----
Confidence            999998765  4556788999999999999999999999999999999999999999876542    122233221    


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                                           .|.+..                                  ..|....+..+|+|+++|.
T Consensus       283 ---------------------qy~FP~----------------------------------pEWs~VSe~aKdlIR~LLk  307 (400)
T KOG0604|consen  283 ---------------------QYEFPE----------------------------------PEWSCVSEAAKDLIRKLLK  307 (400)
T ss_pred             ---------------------CccCCC----------------------------------hhHhHHHHHHHHHHHHHhc
Confidence                                 111111                                  1122333467999999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|.+|.|+++++.|||+.+..
T Consensus       308 t~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  308 TEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             CCchhheeHHHhhcCchhcccc
Confidence            9999999999999999998754

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-43  Score=343.52  Aligned_cols=257  Identities=26%  Similarity=0.366  Sum_probs=200.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||++.+..+++.||+|++....    .....+..|+.++..+     .|+||++++++|.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-----DRRWITNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCceEEEEecCCe
Confidence            47999999999999999999999999999999986321    1122344566555543     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+.+ +|.+++.... ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill--~~~~~~kl~Dfg~~~  150 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQ--LGYVHRDIKPDNVLL--DKNGHIRLADFGSCL  150 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--CCeEECCCCHHHEEE--CCCCCEEEEECCcee
Confidence            9999999955 8988886533 458999999999999999999995  489999999999999  678899999999987


Q ss_pred             ecCCcc----ccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        265 HVGQTL----YQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       265 ~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ....||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.+.+..+....+.......+  
T Consensus       151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--  228 (331)
T cd05597         151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ--  228 (331)
T ss_pred             ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc--
Confidence            653321    22468999999999973     4578899999999999999999999998877666665543111000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|.                        ........+++||++||..++
T Consensus       229 --------------------------------~~~------------------------~~~~~~~~~~~li~~ll~~~~  252 (331)
T cd05597         229 --------------------------------FPP------------------------DVTDVSEEAKDLIRRLICSPE  252 (331)
T ss_pred             --------------------------------CCC------------------------ccCCCCHHHHHHHHHHccCcc
Confidence                                            000                        000011257899999997654


Q ss_pred             CC--CCCHHHHhcCCCcCcCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~  434 (437)
                      .+  |++++++++||||.+..
T Consensus       253 ~r~~r~~~~~~l~hp~~~~~~  273 (331)
T cd05597         253 TRLGRNGLQDFKDHPFFEGID  273 (331)
T ss_pred             cccCCCCHHHHhcCCCCCCCC
Confidence            44  88999999999998754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.4e-42  Score=337.51  Aligned_cols=283  Identities=32%  Similarity=0.470  Sum_probs=219.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|.++....   .......|+.++..+     .|+||+++++++...  
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   80 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-----RHPNIVELKEVVVGKHL   80 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-----CCCCCcceEEEEecCCC
Confidence            5689999999999999999999999999999999864321   122345688887776     788999999998765  


Q ss_pred             CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        184 NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       184 ~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      +.+++||||++++|.+++.... ..+++..++.++.||+.||+|||+  .|++||||||+||++  +.++.+||+|||++
T Consensus        81 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~--~~~~~~kL~dfg~~  155 (309)
T cd07845          81 DSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLKVSNLLL--TDKGCLKIADFGLA  155 (309)
T ss_pred             CeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--CCCCCEEECcccee
Confidence            5789999999999988887643 468999999999999999999996  489999999999999  67888999999999


Q ss_pred             eecCCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        264 CHVGQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       264 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ......   .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..+.+..+....+.++..+++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
T cd07845         156 RTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG  235 (309)
T ss_pred             eecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchh
Confidence            776432   223345778999999876 4688999999999999999999999999999999999999888887665543


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                      ......      ...+.+...      ..   ..+...                  .......+.+||.+||++||.+||
T Consensus       236 ~~~~~~------~~~~~~~~~------~~---~~~~~~------------------~~~~~~~~~~li~~ml~~dp~~R~  282 (309)
T cd07845         236 FSDLPL------VGKFTLPKQ------PY---NNLKHK------------------FPWLSEAGLRLLNFLLMYDPKKRA  282 (309)
T ss_pred             hhcccc------cccccccCC------CC---CchHHh------------------ccccCHHHHHHHHHHhcCChhhCc
Confidence            211100      000000000      00   000000                  000122578999999999999999


Q ss_pred             CHHHHhcCCCcCcCC
Q psy11727        420 SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~  434 (437)
                      |+++++.||||++.+
T Consensus       283 t~~~il~h~~f~~~~  297 (309)
T cd07845         283 TAEEALESSYFKEKP  297 (309)
T ss_pred             CHHHHhcChhhccCC
Confidence            999999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0192|consensus

Probab=100.00  E-value=6.1e-43  Score=342.40  Aligned_cols=245  Identities=29%  Similarity=0.383  Sum_probs=198.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-E
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-H  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-~  185 (437)
                      ....+.+.||+|+||+||+|.+..+. .||||++......   ...+..|+.++.++     +|||||+++|++.... .
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRL-----RHPNIVQFYGACTSPPGS  114 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCc
Confidence            34556667999999999999875442 3999999754322   34788899999886     8999999999999887 7


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCC-eeeCCCCCCcEEEecCCCC-CEEEEeCCC
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS-IIHCDLKPENILLCSPKRS-AIKIIDFGS  262 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~g-iiHrDiKp~NIll~~~~~~-~ikL~DFG~  262 (437)
                      ++|||||+++ +|.+++.......+++..+..|+.||+.|+.|||++  + ||||||||+|||+  +.++ ++||+|||+
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~--~~iIHrDLK~~NiLv--~~~~~~~KI~DFGl  190 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE--GPIIHRDLKSDNILV--DLKGKTLKIADFGL  190 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC--CCeeecccChhhEEE--cCCCCEEEECCCcc
Confidence            9999999965 788888774446799999999999999999999975  6 9999999999999  6776 999999999


Q ss_pred             ceecCC---ccccccccccccChhhhc--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQ---TLYQYIQSRYYRSPEVLL--GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ++....   ..+...||..|||||++.  ...|+.++||||||+++|||+||+.||.+.........++.....|+-.  
T Consensus       191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--  268 (362)
T KOG0192|consen  191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--  268 (362)
T ss_pred             ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--
Confidence            987653   344478999999999999  5689999999999999999999999999988844444443221111100  


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                      .                           .-...+..|+.+||..||..
T Consensus       269 --------------------------------~---------------------------~~~~~l~~l~~~CW~~dp~~  289 (362)
T KOG0192|consen  269 --------------------------------K---------------------------ECPPHLSSLMERCWLVDPSR  289 (362)
T ss_pred             --------------------------------c---------------------------cCCHHHHHHHHHhCCCCCCc
Confidence                                            0                           01125789999999999999


Q ss_pred             CCCHHHHh
Q psy11727        418 RISPTNVL  425 (437)
Q Consensus       418 R~t~~e~l  425 (437)
                      ||+..+++
T Consensus       290 RP~f~ei~  297 (362)
T KOG0192|consen  290 RPSFLEIV  297 (362)
T ss_pred             CCCHHHHH
Confidence            99998876

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=9.7e-43  Score=333.97  Aligned_cols=277  Identities=34%  Similarity=0.570  Sum_probs=218.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||.|++|.||+|++..++..||||.+.....   ....+..|+.+++.+     .|+||+++++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-----CCCCCcchhhhcccCCcEE
Confidence            48899999999999999999999999999999864321   224566788888776     6899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||||+.++|.+++.......+++..++.++.||+.||+|||+  .|++|+||+|+||++  +.++.+||+|||++....
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~--~~i~H~~l~p~nill--~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLI--NTEGAIKLADFGLARAFG  151 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--CCCCCEEEeeccchhhcc
Confidence            9999998899988876555668999999999999999999995  489999999999999  678889999999987553


Q ss_pred             Cc---cccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   .....++..|+|||++.+.. ++.++|+|||||++|+|+||+.||.+.++.+...++.+..+.|+..+++.....
T Consensus       152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07860         152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL  231 (284)
T ss_pred             cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence            32   22345678899999987654 688999999999999999999999999998888999998888877665432221


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                      ..+-...+..                ....+..++                  ......+.+||.+||+.||.+|||+++
T Consensus       232 ~~~~~~~~~~----------------~~~~~~~~~------------------~~~~~~~~~li~~~l~~~P~~Rpt~~~  277 (284)
T cd07860         232 PDYKPSFPKW----------------ARQDFSKVV------------------PPLDEDGRDLLSQMLHYDPNKRISAKA  277 (284)
T ss_pred             HHHHhhcccc----------------cccCHHHHc------------------ccCCHHHHHHHHHhcCCCcccCCCHHH
Confidence            1111100000                000011110                  001125689999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||||
T Consensus       278 ~l~~~~f  284 (284)
T cd07860         278 ALAHPFF  284 (284)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.3e-43  Score=342.95  Aligned_cols=190  Identities=27%  Similarity=0.480  Sum_probs=162.2

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|.+..+++.||+|+++...    .....+..|..++..+.    .|++|+.+++++.+.+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~i~~~~~~~~~~~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS----SNPFLVGLHSCFQTTSRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc----CCCCEeeEEEEEEeCCEEEEEEe
Confidence            46899999999999999999999999997432    12233456666666553    68999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec---C
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---G  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~---~  267 (437)
                      |+++ +|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...   .
T Consensus        77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~--~ivHrDlkp~Nili--~~~~~~kl~Dfg~~~~~~~~~  150 (327)
T cd05617          77 YVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER--GIIYRDLKLDNVLL--DADGHIKLTDYGMCKEGLGPG  150 (327)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHEEE--eCCCCEEEeccccceeccCCC
Confidence            9965 788777654  3589999999999999999999964  89999999999999  67888999999998753   2


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||..
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         151 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence            333456799999999999999999999999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.4e-42  Score=331.65  Aligned_cols=281  Identities=31%  Similarity=0.470  Sum_probs=215.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|.+.+.||+|+||.||+|.+..++..||+|++.....  .......|+.+++.+     .|+||+++++++...+..
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~   78 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-----KHANIVLLHDIIHTKETL   78 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-----CCCCEeEEEEEEecCCeE
Confidence            4679999999999999999999999999999999864422  123456677777766     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      |+||||+++++.+.+.... ..+++..++.++.||+.||+|||++  ||+|+||||+|||+  +.++.++|+|||++...
T Consensus        79 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~--~i~H~dlkp~Nil~--~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          79 TFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ--HILHRDLKPQNLLI--SYLGELKLADFGLARAK  153 (291)
T ss_pred             EEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCChHHEEE--cCCCcEEEecccccccc
Confidence            9999999989888776543 4578899999999999999999964  89999999999999  67888999999998654


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKN-EVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+ ..+.+..+....+.|+..+.+...
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence            322   2234568899999998764 57889999999999999999999997654 346677777778877776655443


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+.........               ...+..+.                ........+.+||.+||..||.+|||+
T Consensus       234 ~~~~~~~~~~~~~~---------------~~~~~~~~----------------~~~~~~~~~~~ll~~~l~~dp~~R~t~  282 (291)
T cd07870         234 KLPNYKPEWFLPCK---------------PQQLRVVW----------------KRLSRPPKAEDLASQMLMMFPKDRISA  282 (291)
T ss_pred             hcccccchhccccC---------------Ccchhhhc----------------cccCCChHHHHHHHHHhCcCcccCcCH
Confidence            32222211100000               00000000                000012357899999999999999999


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      +|++.||||
T Consensus       283 ~~~l~h~~~  291 (291)
T cd07870         283 QDALLHPYF  291 (291)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.7e-42  Score=332.29  Aligned_cols=278  Identities=32%  Similarity=0.583  Sum_probs=219.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||+|.+..++..||+|++....   .....+..|+.+++.+     .|+||+++++++...+.++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-----QHPYVVKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-----CCCCCcceeeEEecCCeeE
Confidence            5899999999999999999999999999999987432   1234566677777666     5899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||||++++|.+++.... ..+++..++.++.||+.||+|||++  |++|+||||+||++  +.++.++|+|||++....
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~ni~~--~~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN--GIMHRDLKPANLLI--SADGVLKIADFGLARLFS  150 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCcCHHHEEE--cCCCcEEEeeeeeccccc
Confidence            999999779999887654 5689999999999999999999964  89999999999999  668889999999987664


Q ss_pred             Cc----cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QT----LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..    .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+..+...++.|....++....
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence            32    2345688899999998754 468999999999999999999999999998888999988888887665544322


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+ ..+.   +.           ......+..+                  .......+.+||++||..||.+|||++
T Consensus       231 ~~~~-~~~~---~~-----------~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~R~~~~  277 (286)
T cd07832         231 LPDY-NKIT---FP-----------ESKPIPLEEI------------------FPDASPEALDLLKGLLVYDPSKRLSAA  277 (286)
T ss_pred             cchh-hccc---CC-----------CCCcchHHHh------------------CCCccHHHHHHHHHHhccChhhCCCHH
Confidence            1111 0000   00           0000000000                  001123679999999999999999999


Q ss_pred             HHhcCCCcC
Q psy11727        423 NVLRHEFFL  431 (437)
Q Consensus       423 e~l~Hp~~~  431 (437)
                      ++|+||||.
T Consensus       278 ~~l~h~~~~  286 (286)
T cd07832         278 EALRHPYFT  286 (286)
T ss_pred             HHhhCcCcC
Confidence            999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-42  Score=332.06  Aligned_cols=281  Identities=33%  Similarity=0.527  Sum_probs=216.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|++|.||+|.+..+++.||+|.+.....  .......|+.++..+     .|+||+++++++.+.++.
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~   78 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-----KHANIVTLHDIIHTKKTL   78 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-----CCcceeeEEEEEecCCeE
Confidence            4689999999999999999999999999999999864322  123455688888776     688999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||.|||+  .||+||||||+||++  +.++.+||+|||++...
T Consensus        79 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~dl~p~nil~--~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          79 TLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQ--RRVLHRDLKPQNLLI--SERGELKLADFGLARAK  153 (291)
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCHHHEEE--cCCCCEEECcccccccc
Confidence            9999999999999887654 368999999999999999999995  489999999999999  67888999999998654


Q ss_pred             CCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKN-EVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.. ..+.+..+.+.++.|....++...
T Consensus       154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07844         154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS  233 (291)
T ss_pred             CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence            322   122346788999999876 458899999999999999999999998766 556777777778877766655444


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+......               ......+....              +  .......+.+||.+||++||.+|||+
T Consensus       234 ~~~~~~~~~~~---------------~~~~~~~~~~~--------------~--~~~~~~~~~~li~~~L~~~p~~Rps~  282 (291)
T cd07844         234 SNPEFKPYSFP---------------FYPPRPLINHA--------------P--RLDRIPHGEELALKFLQYEPKKRISA  282 (291)
T ss_pred             hcccccccccc---------------ccCChhHHHhC--------------c--CCCCchhHHHHHHHHhccCcccccCH
Confidence            32222111000               00000000000              0  00001256899999999999999999


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      .++++||||
T Consensus       283 ~e~l~~~~f  291 (291)
T cd07844         283 AEAMKHPYF  291 (291)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.3e-42  Score=333.19  Aligned_cols=279  Identities=33%  Similarity=0.521  Sum_probs=215.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE-
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH-  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~-  185 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.....   .......|+.++..+.    +|+||+++++++...+. 
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~   76 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS----ESIYIVRLLDVEHVEEKN   76 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc----CCCCccceeeeEeecCCC
Confidence            469999999999999999999999999999999864322   2345667888887774    56899999999987665 


Q ss_pred             ----EEEEEEeccCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEE
Q psy11727        186 ----LCLVFELLSYNLYNLIRNTN---FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKI  257 (437)
Q Consensus       186 ----~~lV~E~~~~~L~~~l~~~~---~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL  257 (437)
                          .|+||||++++|.+++....   ...+++..++.++.||+.||.|||+  .||+||||||+||++  +. ++.+||
T Consensus        77 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~~~nil~--~~~~~~~kl  152 (295)
T cd07837          77 GKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK--HGVMHRDLKPQNLLV--DKQKGLLKI  152 (295)
T ss_pred             CCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEE--ecCCCeEEE
Confidence                89999999999998886542   2358999999999999999999995  489999999999999  44 778999


Q ss_pred             EeCCCceecCCcc---ccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        258 IDFGSSCHVGQTL---YQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       258 ~DFG~s~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      +|||.+.......   ....+++.|+|||++.+ ..++.++|+||||+++|+|++|.+||.+.+....+..+....+.|+
T Consensus       153 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~  232 (295)
T cd07837         153 ADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPT  232 (295)
T ss_pred             eecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            9999987553221   22356788999999865 4578999999999999999999999999988888888888777776


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ...++.......+... +..              .+  ..+...                  .......+.+||.+||.+
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~--------------~~--~~~~~~------------------~~~~~~~~~~~i~~~l~~  277 (295)
T cd07837         233 EQVWPGVSKLRDWHEF-PQW--------------KP--QDLSRA------------------VPDLSPEGLDLLQKMLRY  277 (295)
T ss_pred             hhhCcchhhccchhhc-Ccc--------------cc--hhHHHh------------------ccccCHHHHHHHHHHccC
Confidence            6554433222111100 000              00  000000                  001122578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcC
Q psy11727        414 DPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~  431 (437)
                      ||.+|||+.|++.||||+
T Consensus       278 ~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         278 DPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ChhhcCCHHHHhcCCCcC
Confidence            999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.7e-42  Score=333.40  Aligned_cols=280  Identities=33%  Similarity=0.530  Sum_probs=218.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc------chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +|.+.+.||+|+||.||+|.+..+++.||||.++.....      ......|+.++..+     .|+||+++++++.+.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-----KHPNIIGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-----CCCCChhhhheeecCC
Confidence            588899999999999999999999999999999754322      22344566666555     6899999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ..++||||+.++|.+++.... ..+++..+..++.||+.||+|||++  ||+|+||||+||++  +.++.++|+|||++.
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~--~i~H~dl~p~nill--~~~~~~~l~dfg~~~  150 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN--WILHRDLKPNNLLI--ASDGVLKLADFGLAR  150 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeecCCChhhEEE--cCCCCEEEccceeee
Confidence            999999999778999887654 3589999999999999999999964  89999999999999  678889999999997


Q ss_pred             ecCCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        265 HVGQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       265 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   .....++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..+.+.++....+.|....++..
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (298)
T cd07841         151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV  230 (298)
T ss_pred             eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence            66432   223456788999999865 46789999999999999999999999998888888888887777766555433


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      .....+.......                 ......+                  .......+.+||.+||.+||.+|||
T Consensus       231 ~~~~~~~~~~~~~-----------------~~~~~~~------------------~~~~~~~~~~li~~~l~~~P~~R~s  275 (298)
T cd07841         231 TSLPDYVEFKPFP-----------------PTPLKQI------------------FPAASDDALDLLQRLLTLNPNKRIT  275 (298)
T ss_pred             ccccccccccccC-----------------Ccchhhh------------------cccccHHHHHHHHHHhcCCcccCcC
Confidence            2221111100000                 0000000                  0111236789999999999999999


Q ss_pred             HHHHhcCCCcCcCCC
Q psy11727        421 PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~  435 (437)
                      +.|++.||||++.+.
T Consensus       276 ~~e~l~~~~~~~~~~  290 (298)
T cd07841         276 ARQALEHPYFSNDPA  290 (298)
T ss_pred             HHHHhhCccccCCCC
Confidence            999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=2.8e-42  Score=332.75  Aligned_cols=284  Identities=31%  Similarity=0.507  Sum_probs=222.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|++|+||+|.+..+++.||+|.+....   .....+..|+.+++.+     .|+||+++++++.+.+++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-----QHGNIVRLQDVVHSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-----cCCCEeeEEEEEecCCeE
Confidence            57999999999999999999999999999999986432   2224566777777766     689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+.+.......+++..++.++.||+.||+|||++  |++||||+|+||+++. .++.+||+|||++...
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~i~H~dl~p~nill~~-~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH--RVLHRDLKPQNLLIDR-RTNALKLADFGLARAF  153 (294)
T ss_pred             EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCCcceEEEEC-CCCEEEEccccccccc
Confidence            999999998999888765544578899999999999999999964  8999999999999942 3456999999999755


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....++..|+|||++.+. .++.++|+|||||++|+|+||.+||.+.+..+.+.++....+.|...++.....
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (294)
T PLN00009        154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS  233 (294)
T ss_pred             CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence            332   2234568899999998764 578999999999999999999999999888888888888888888777654433


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+....+                  .+....                ...........+.+||.+||+.||.+|||+.
T Consensus       234 ~~~~~~~~~------------------~~~~~~----------------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~  279 (294)
T PLN00009        234 LPDYKSAFP------------------KWPPKD----------------LATVVPTLEPAGVDLLSKMLRLDPSKRITAR  279 (294)
T ss_pred             chhhhhhcc------------------cCCCCC----------------HHHhCcCCChHHHHHHHHHccCChhhCcCHH
Confidence            322211110                  000000                0000001112578999999999999999999


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      ++++||||.+...
T Consensus       280 ~~l~~~~~~~~~~  292 (294)
T PLN00009        280 AALEHEYFKDLGD  292 (294)
T ss_pred             HHhcCchHhHHhc
Confidence            9999999987653

>KOG0690|consensus

Probab=100.00  E-value=2.5e-44  Score=330.54  Aligned_cols=261  Identities=28%  Similarity=0.445  Sum_probs=216.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ..-.++|..+++||+|.||.|.+|+.+.+++.+|+|++++.- ..........+.+.-...+..||.+..+...|+..++
T Consensus       164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKev-iiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr  242 (516)
T KOG0690|consen  164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEV-IIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR  242 (516)
T ss_pred             eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhh-eeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence            345678999999999999999999999999999999997532 2222222222333222334589999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||..| .|+-.+...  ..++++.++.+...|..||.|||++  +||.||||.+|+|+  |++|+|||+|||+++
T Consensus       243 lCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~--~ivYRDlKLENLlL--DkDGHIKitDFGLCK  316 (516)
T KOG0690|consen  243 LCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR--NIVYRDLKLENLLL--DKDGHIKITDFGLCK  316 (516)
T ss_pred             EEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC--Ceeeeechhhhhee--ccCCceEeeecccch
Confidence            9999999954 787766654  4599999999999999999999975  79999999999999  899999999999986


Q ss_pred             e---cCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 H---VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .   .+....++|||+.|+|||++....|+.++|+|.+||++|||++|+.||...+....+..|.-.--..|..+.    
T Consensus       317 E~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls----  392 (516)
T KOG0690|consen  317 EEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLS----  392 (516)
T ss_pred             hcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCC----
Confidence            4   367778899999999999999999999999999999999999999999999988888877543222211110    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-  420 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-  420 (437)
                                                                                 .+.+.|+.++|..||.+|.. 
T Consensus       393 -----------------------------------------------------------~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  393 -----------------------------------------------------------PEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             -----------------------------------------------------------HHHHHHHHHHhhcChHhhcCC
Confidence                                                                       14589999999999999985 


Q ss_pred             ----HHHHhcCCCcCcCCCC
Q psy11727        421 ----PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       421 ----~~e~l~Hp~~~~~~~~  436 (437)
                          +.|+.+|+||..++++
T Consensus       414 GpdDakEi~~h~FF~~v~W~  433 (516)
T KOG0690|consen  414 GPDDAKEIMRHRFFASVDWE  433 (516)
T ss_pred             CchhHHHHHhhhhhccCCHH
Confidence                8899999999988764

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2e-42  Score=352.23  Aligned_cols=279  Identities=25%  Similarity=0.338  Sum_probs=205.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      ...|.+.+.||+|+||.||+|.+..+++.||||...     ......|+.+++.+     .|+|||++++++...+..++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L-----~HpnIv~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRL-----SHPAVLALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHC-----CCCCCCcEEEEEEECCEEEE
Confidence            347999999999999999999999999999999643     23456788888877     78999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||++.++|.+++.... ..+++..++.++.||+.||.|||+  .|||||||||+|||+  +.++.+||+|||+++....
T Consensus       238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDLKP~NILl--~~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHG--EGIIHRDIKTENVLV--NGPEDICLGDFGAACFARG  312 (461)
T ss_pred             EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCEEECcCCHHHEEE--CCCCCEEEcccCCceeccc
Confidence            99999999999887643 368999999999999999999995  489999999999999  6778899999999976532


Q ss_pred             c-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC-CCCCC------HHHHHHHHHHHhCCCChhh
Q psy11727        269 T-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL-FSGKN------EVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       269 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p-f~~~~------~~~~~~~i~~~~~~p~~~~  336 (437)
                      .     .....||..|+|||++.+..++.++|||||||++|||++|..| |....      ...++.+++...+.....+
T Consensus       313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~  392 (461)
T PHA03211        313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF  392 (461)
T ss_pred             ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence            2     1235689999999999999999999999999999999998754 43321      1234445554433322111


Q ss_pred             hccCCc--cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASK--TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ......  ...+.......        .......+.|..   ..                   .....+.+||.+||++|
T Consensus       393 ~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~---~~-------------------~~~~~~~dli~~mL~~D  442 (461)
T PHA03211        393 PQHAGSRLVSQYRHRAARN--------RRPAYTRPAWTR---YY-------------------KLDLDVEYLVCRALTFD  442 (461)
T ss_pred             CCCcchHHHHHHHhhhhcc--------cCCccCCcchhh---hc-------------------cccchHHHHHHHHcccC
Confidence            100000  00000000000        000000000000   00                   00125789999999999


Q ss_pred             CCCCCCHHHHhcCCCcCc
Q psy11727        415 PKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~  432 (437)
                      |.+|||+.|||+||||+.
T Consensus       443 P~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        443 GARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hhhCcCHHHHhhCcccCC
Confidence            999999999999999975

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=2.5e-42  Score=330.65  Aligned_cols=250  Identities=28%  Similarity=0.441  Sum_probs=194.9

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||+||++.+..+|+.||+|.+.....    .......|+.+++.+     .||||+++++++....++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-----NSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-----CCCcEEEEEEEEecCCeEEEEEecC
Confidence            6999999999999999999999999863221    112334467776665     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc--c
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--L  270 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~--~  270 (437)
                      +| +|.+++......++++..+..++.||+.||+|||+  .||+||||||+||++  +.++.++|+|||++......  .
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili--~~~~~~~l~Dfg~~~~~~~~~~~  151 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS--MDIVYRDMKPENVLL--DDQGNCRLSDLGLAVELKDGKTI  151 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH--CCEEEccCChHhEEE--cCCCCEEEeeceeeeecCCCcee
Confidence            65 78888766555568999999999999999999995  489999999999999  67888999999998765432  2


Q ss_pred             ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhccc
Q psy11727        271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL  350 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~  350 (437)
                      ....|+..|+|||++.+..++.++|+|||||++|+|++|.+||.+.........+....-..       ...        
T Consensus       152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~--------  216 (277)
T cd05607         152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-------EVK--------  216 (277)
T ss_pred             eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-------ccc--------
Confidence            33568899999999999899999999999999999999999997654322222221110000       000        


Q ss_pred             CCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH----HHHhc
Q psy11727        351 SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP----TNVLR  426 (437)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~----~e~l~  426 (437)
                                       .+                      ..    .....+.+||.+||+.||.+|||+    ++++.
T Consensus       217 -----------------~~----------------------~~----~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~  253 (277)
T cd05607         217 -----------------FE----------------------HQ----NFTEESKDICRLFLAKKPEDRLGSREKNDDPRK  253 (277)
T ss_pred             -----------------cc----------------------cc----cCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence                             00                      00    001157899999999999999999    77889


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||+..+
T Consensus       254 h~~f~~~~  261 (277)
T cd05607         254 HEFFKTIN  261 (277)
T ss_pred             ChhhcCCC
Confidence            99998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-43  Score=347.07  Aligned_cols=247  Identities=28%  Similarity=0.376  Sum_probs=193.8

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||+||+|++..+++.||+|++......    ......|..++.....  ..||+|+++++.|...+++|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL--DESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc--CCCCcCcceEEEEecCCeEEEEEcCC
Confidence            69999999999999999999999998632211    1122233344333221  26899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---Cc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QT  269 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---~~  269 (437)
                      ++ +|.+.+...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++....   ..
T Consensus        79 ~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~--~ivHrDlkp~Nili--~~~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          79 SGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY--DIVYRDLKPENILL--DATGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             CCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCCHHHeEE--CCCCCEEEecCCcCcCCCCCCCC
Confidence            65 788887654  3589999999999999999999964  89999999999999  678889999999986532   22


Q ss_pred             cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhc
Q psy11727        270 LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFD  348 (437)
Q Consensus       270 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~  348 (437)
                      ....+||..|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+.......+.              
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--------------  218 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK--------------  218 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC--------------
Confidence            3356799999999999765 4899999999999999999999999988776665555321100000              


Q ss_pred             ccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----CHHHH
Q psy11727        349 RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----SPTNV  424 (437)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----t~~e~  424 (437)
                                            .                          .....+.+||++||+.||.+||    ++.++
T Consensus       219 ----------------------~--------------------------~~~~~~~~li~~~L~~~P~~R~~~~~~~~~l  250 (330)
T cd05586         219 ----------------------N--------------------------VLSDEGRQFVKGLLNRNPQHRLGAHRDAVEL  250 (330)
T ss_pred             ----------------------c--------------------------cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHH
Confidence                                  0                          0001568999999999999998    79999


Q ss_pred             hcCCCcCcCC
Q psy11727        425 LRHEFFLKHS  434 (437)
Q Consensus       425 l~Hp~~~~~~  434 (437)
                      ++||||....
T Consensus       251 l~h~~~~~~~  260 (330)
T cd05586         251 KEHPFFADID  260 (330)
T ss_pred             hcCccccCCC
Confidence            9999998654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.6e-43  Score=344.30  Aligned_cols=245  Identities=29%  Similarity=0.429  Sum_probs=198.8

Q ss_pred             ceecccCceEEEEEEE---cCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFD---HEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +.||+|+||.||++.+   ..+|+.||+|++.....   .......|+.++..+     .|+||+++++++.+.+.+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-----NHPFIVKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-----CCCCcccEEEEEEcCCEEEEE
Confidence            5799999999999976   35789999999974321   122344566666655     789999999999999999999


Q ss_pred             EEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+. ++|.+.+...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.....
T Consensus        77 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~--~~~~~~kL~Dfg~~~~~~~  150 (318)
T cd05582          77 LDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESID  150 (318)
T ss_pred             EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHeEE--CCCCcEEEeeccCCcccCC
Confidence            99996 4888888654  358999999999999999999995  489999999999999  6788899999999876532


Q ss_pred             c---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 T---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      .   .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.......|.           
T Consensus       151 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~-----------  219 (318)
T cd05582         151 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ-----------  219 (318)
T ss_pred             CCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC-----------
Confidence            2   34567899999999999989999999999999999999999999988876666655331100000           


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-----
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-----  420 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-----  420 (437)
                                                                          .....+.+||++||+.||.+|||     
T Consensus       220 ----------------------------------------------------~~~~~~~~li~~~l~~~P~~R~~a~~~~  247 (318)
T cd05582         220 ----------------------------------------------------FLSPEAQSLLRALFKRNPANRLGAGPDG  247 (318)
T ss_pred             ----------------------------------------------------CCCHHHHHHHHHHhhcCHhHcCCCCCCC
Confidence                                                                00115689999999999999999     


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      +++++.||||+...
T Consensus       248 ~~~~~~~~~~~~~~  261 (318)
T cd05582         248 VEEIKRHPFFSTID  261 (318)
T ss_pred             HHHHhCCCCcCCCC
Confidence            77899999998754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.6e-42  Score=340.74  Aligned_cols=258  Identities=24%  Similarity=0.353  Sum_probs=200.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||++....+++.||+|++.....    ....+..|+.++..     ..|++|+++++++.+.++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----~~~~~i~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-----GDNQWITTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhh-----CCCCCEeeEEEEEecCCE
Confidence            479999999999999999999999999999999863211    11223344444433     488999999999999999


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+. |+|.+++.... ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~--~~iiHrDlkp~Nili--~~~~~~kL~DfG~a~  150 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILM--DMNGHIRLADFGSCL  150 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEE--CCCCCEEEeecchhe
Confidence            999999995 58999887643 358999999999999999999995  589999999999999  678899999999986


Q ss_pred             ecCCc----cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        265 HVGQT----LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       265 ~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      .....    ....+||+.|+|||++.     ...++.++|||||||++|||++|++||.+.+..+.+..+.......+  
T Consensus       151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--  228 (332)
T cd05623         151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ--  228 (332)
T ss_pred             ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc--
Confidence            54221    12357899999999986     34688999999999999999999999998887777666643110000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|..                        .......+.+||++||..+|
T Consensus       229 --------------------------------~p~~------------------------~~~~s~~~~~li~~ll~~~~  252 (332)
T cd05623         229 --------------------------------FPAQ------------------------VTDVSEDAKDLIRRLICSRE  252 (332)
T ss_pred             --------------------------------CCCc------------------------cccCCHHHHHHHHHHccChh
Confidence                                            0000                        00001257899999997655


Q ss_pred             CC--CCCHHHHhcCCCcCcCCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~~  435 (437)
                      ..  |+|++++++||||++..+
T Consensus       253 ~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         253 HRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             hhcCCCCHHHHhCCCCcCCCCH
Confidence            44  789999999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.6e-42  Score=340.76  Aligned_cols=258  Identities=25%  Similarity=0.367  Sum_probs=201.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||++.+..+++.||+|++.....    ....+..|+.++..     ..|++|+++++++.+.++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-----~~~~~i~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-----GDCQWITTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHh-----CCCCCEeeEEEEEEcCCE
Confidence            479999999999999999999999999999999863211    11223344444443     378999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .|+||||+.| +|.+++.... ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~--~~iiHrDlkp~Nill--~~~~~~kl~DfG~a~  150 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ--LHYVHRDIKPDNVLL--DMNGHIRLADFGSCL  150 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCchHHEEE--cCCCCEEEEecccee
Confidence            9999999955 8888887643 358999999999999999999995  489999999999999  678889999999987


Q ss_pred             ecCCcc----ccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        265 HVGQTL----YQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       265 ~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ....||+.|+|||++.+     ..++.++|+|||||++|+|++|+.||.+.+..+....+......++  
T Consensus       151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--  228 (331)
T cd05624         151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ--  228 (331)
T ss_pred             eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc--
Confidence            654321    23568999999999976     4678999999999999999999999998887666665543110000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|.                        ........+.+||.+||..++
T Consensus       229 --------------------------------~p~------------------------~~~~~~~~~~~li~~ll~~~~  252 (331)
T cd05624         229 --------------------------------FPS------------------------HITDVSEEAKDLIQRLICSRE  252 (331)
T ss_pred             --------------------------------CCC------------------------ccccCCHHHHHHHHHHccCch
Confidence                                            000                        000001257899999999766


Q ss_pred             CC--CCCHHHHhcCCCcCcCCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+  |++++++++||||+...+
T Consensus       253 ~~~~~~~~~~~~~h~~f~~~~~  274 (331)
T cd05624         253 RRLGQNGIEDFKKHAFFEGIDW  274 (331)
T ss_pred             hhcCCCCHHHHhcCCCcCCCCH
Confidence            55  579999999999987654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=8.6e-43  Score=345.58  Aligned_cols=250  Identities=26%  Similarity=0.390  Sum_probs=194.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|+..+.||+|+||+||+|.+..+++.||||++....  .....+..|+.++..+     .|+||+++++++...+.+
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-----NHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-----CCCCcceeeeEeccCCeE
Confidence            467888999999999999999999999999999986432  2234566777777765     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+.+ +|.+.      ...++..+..++.||+.||+|||+  .||+||||||+|||+  ++++.+||+|||++..
T Consensus       148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll--~~~~~~kL~DfG~~~~  217 (353)
T PLN00034        148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHR--RHIVHRDIKPSNLLI--NSAKNVKIADFGVSRI  217 (353)
T ss_pred             EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEE--cCCCCEEEccccccee
Confidence            999999976 55331      235678888999999999999995  489999999999999  6788899999999976


Q ss_pred             cCCc---cccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChhh
Q psy11727        266 VGQT---LYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGYL  336 (437)
Q Consensus       266 ~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~p~~~~  336 (437)
                      ....   .....||..|+|||++..     ...+.++|||||||++|||++|+.||......+....+... ...++.  
T Consensus       218 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--  295 (353)
T PLN00034        218 LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE--  295 (353)
T ss_pred             cccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC--
Confidence            5432   234578999999999843     23456899999999999999999999744332222211111 000000  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                ........+.+||.+||+.||+
T Consensus       296 ----------------------------------------------------------~~~~~~~~l~~li~~~l~~~P~  317 (353)
T PLN00034        296 ----------------------------------------------------------APATASREFRHFISCCLQREPA  317 (353)
T ss_pred             ----------------------------------------------------------CCCccCHHHHHHHHHHccCChh
Confidence                                                                      0000112579999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.|+++||||.+.
T Consensus       318 ~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        318 KRWSAMQLLQHPFILRA  334 (353)
T ss_pred             hCcCHHHHhcCcccccC
Confidence            99999999999999875

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=5.2e-42  Score=329.82  Aligned_cols=256  Identities=29%  Similarity=0.423  Sum_probs=205.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .|+..+.||+|+||+||+|.+..+++.||+|.+.....    .......|+.++..+     .|++|+.+.+.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-----NSQFVVNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-----CCcCceeEEEEEecCCEE
Confidence            37788899999999999999999999999999864321    122345677777766     678999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+.+ +|.+++.......+++..+..++.|++.||.|||+  .||+||||||+||++  ++++.++|+|||++..
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~--~~iiH~dikp~Nili--~~~~~~kl~Dfg~~~~  151 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR--ENTVYRDLKPENILL--DDYGHIRISDLGLAVK  151 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEE--CCCCCEEEecCCccee
Confidence            999999965 78777765544569999999999999999999995  489999999999999  6678899999999866


Q ss_pred             cCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...  ......|+..|+|||++.+..++.++|+|||||++|+|++|.+||.+.........+...........       
T Consensus       152 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~-------  224 (285)
T cd05632         152 IPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY-------  224 (285)
T ss_pred             cCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccccc-------
Confidence            532  22345789999999999998999999999999999999999999988766554444433211110000       


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---  420 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---  420 (437)
                                                                          +......+.+|+.+||+.||.+|||   
T Consensus       225 ----------------------------------------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05632         225 ----------------------------------------------------SAKFSEEAKSICKMLLTKDPKQRLGCQE  252 (285)
T ss_pred             ----------------------------------------------------CccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence                                                                0000115689999999999999999   


Q ss_pred             --HHHHhcCCCcCcCC
Q psy11727        421 --PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 --~~e~l~Hp~~~~~~  434 (437)
                        +.+++.||||...+
T Consensus       253 ~~~~~l~~~~~~~~~~  268 (285)
T cd05632         253 EGAGEVKRHPFFRNMN  268 (285)
T ss_pred             cChHHHHcChhhhcCC
Confidence              88999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-42  Score=335.52  Aligned_cols=285  Identities=32%  Similarity=0.532  Sum_probs=213.3

Q ss_pred             CeeeeceecccCceEEEEEEEcC--CCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHE--EKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +|.+.+.||+|+||.||+|.+..  ++..||+|.+....    ........|+.++..+     .||||+++++++.+. 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-----KHENVVSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-----CCCCccceEEEEeCCC
Confidence            58899999999999999999988  89999999997532    2335566787777766     689999999999988 


Q ss_pred             -CEEEEEEEeccCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC----CCCE
Q psy11727        184 -NHLCLVFELLSYNLYNLIRNTNF---HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK----RSAI  255 (437)
Q Consensus       184 -~~~~lV~E~~~~~L~~~l~~~~~---~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~----~~~i  255 (437)
                       +.+++||||++++|.+++.....   ..+++..++.++.||+.||+|||+  .||+||||||+||++  +.    ++.+
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~h~dlkp~Nil~--~~~~~~~~~~  151 (316)
T cd07842          76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS--NWVLHRDLKPANILV--MGEGPERGVV  151 (316)
T ss_pred             CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEE--cCCCCccceE
Confidence             89999999999988887754321   258999999999999999999995  489999999999999  55    7889


Q ss_pred             EEEeCCCceecCCcc------ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---------
Q psy11727        256 KIIDFGSSCHVGQTL------YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEV---------  319 (437)
Q Consensus       256 kL~DFG~s~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~---------  319 (437)
                      ||+|||++.......      ....++..|+|||++.+. .++.++|||||||++|+|++|++||.+....         
T Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~  231 (316)
T cd07842         152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR  231 (316)
T ss_pred             EECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence            999999987653322      234678889999998764 5889999999999999999999999876543         


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      ..+..+.+.++.+.............+.....          .......+. ..+......               ....
T Consensus       232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~---------------~~~~  285 (316)
T cd07842         232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMK----------DFKTKTYPS-NSLAKWMEK---------------HKKP  285 (316)
T ss_pred             HHHHHHHHHhCCCchhHHHHHhhcccchhhhh----------hccCCCCCC-ccHHHHHHh---------------ccCC
Confidence            35667777777776655543322222111000          000000010 011111100               0012


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ...+.++|.+||++||.+|||+.|+++||||
T Consensus       286 ~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         286 DSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            2367899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0589|consensus

Probab=100.00  E-value=2.8e-43  Score=343.65  Aligned_cols=253  Identities=30%  Similarity=0.446  Sum_probs=218.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|..++++|+|+||.+++++.+.++..+++|.+......   ...+..|+.++.++     .|||||.+.+.|..++.
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-----~hP~iv~y~ds~~~~~~   77 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-----LHPNIVEYKDSFEEDGQ   77 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-----cCCCeeeeccchhcCCc
Confidence            46799999999999999999999999999999999754332   22456677777765     89999999999999887


Q ss_pred             -EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        186 -LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       186 -~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                       +||||+||.| +|.+.++..+..-++++.+..++.||+.|+.|||+  ..|+|||||+.|||+  .+++.|||+|||+|
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~--~~iLHRDlK~~Nifl--tk~~~VkLgDfGla  153 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE--NRVLHRDLKCANIFL--TKDKKVKLGDFGLA  153 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh--hhhhcccchhhhhhc--cccCceeecchhhh
Confidence             9999999955 89999988776679999999999999999999995  479999999999999  56777999999999


Q ss_pred             eecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      +.....   ..+.+||+.|++||++.+.+|..++|+|||||++|||++-+++|.+.+-.....+|......|-..+.   
T Consensus       154 K~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~y---  230 (426)
T KOG0589|consen  154 KILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMY---  230 (426)
T ss_pred             hhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccc---
Confidence            887654   45789999999999999999999999999999999999999999999998888888876533322111   


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                 ...++.||..||..+|..|||
T Consensus       231 -----------------------------------------------------------s~el~~lv~~~l~~~P~~RPs  251 (426)
T KOG0589|consen  231 -----------------------------------------------------------SSELRSLVKSMLRKNPEHRPS  251 (426)
T ss_pred             -----------------------------------------------------------cHHHHHHHHHHhhcCCccCCC
Confidence                                                                       015789999999999999999


Q ss_pred             HHHHhcCCCcCc
Q psy11727        421 PTNVLRHEFFLK  432 (437)
Q Consensus       421 ~~e~l~Hp~~~~  432 (437)
                      +.++|.+|.++.
T Consensus       252 a~~LL~~P~l~~  263 (426)
T KOG0589|consen  252 ALELLRRPHLLR  263 (426)
T ss_pred             HHHHhhChhhhh
Confidence            999999998864

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=7e-42  Score=327.33  Aligned_cols=275  Identities=34%  Similarity=0.563  Sum_probs=211.6

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc--hHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL--NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NHLC  187 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~~~  187 (437)
                      |++.+.||+|+||.||+|.+..++..||+|.++......  .....|+.++..+.    .|+|++++++++.+.  +.++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~   76 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS----PHPNILRLIEVLFDRKTGRLA   76 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC----CCCCccceEEEEecCCCCcEE
Confidence            678899999999999999999999999999987532211  12234555555542    589999999999988  8999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||||++++|.+.+.... ..+++..++.++.||+.||+|||+  .|++||||+|+||++  +. +.+||+|||++....
T Consensus        77 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~p~ni~l--~~-~~~kl~dfg~~~~~~  150 (282)
T cd07831          77 LVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR--NGIFHRDIKPENILI--KD-DILKLADFGSCRGIY  150 (282)
T ss_pred             EEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEE--cC-CCeEEEecccccccc
Confidence            999999999999887643 458999999999999999999995  489999999999999  45 889999999997653


Q ss_pred             Cc--cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        268 QT--LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       268 ~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..  .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.+.+..+....+.+.++.++..+........
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07831         151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR  230 (282)
T ss_pred             cCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence            22  233567889999998754 457889999999999999999999999999989999998888888876632211110


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                             ...+......         ...+..+.                  ......+.+||.+||++||.+|||++++
T Consensus       231 -------~~~~~~~~~~---------~~~~~~~~------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~  276 (282)
T cd07831         231 -------HMNYNFPSKK---------GTGLRKLL------------------PNASAEGLDLLKKLLAYDPDERITAKQA  276 (282)
T ss_pred             -------cccccCcccc---------cccHHHHc------------------ccccHHHHHHHHHHhccCcccccCHHHH
Confidence                   0000000000         00000000                  0112368999999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      ++||||
T Consensus       277 l~~~~~  282 (282)
T cd07831         277 LRHPYF  282 (282)
T ss_pred             hhCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.5e-41  Score=324.20  Aligned_cols=279  Identities=32%  Similarity=0.508  Sum_probs=208.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+     .|+|++++++++...+.+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-----KHPNLVNLIEVFRRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-----CCCCEeeeeeEEeeCCEE
Confidence            47999999999999999999999999999999986432   1224456788887776     689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+++++.+.+.... ..+++..++.++.||+.+|+|||+  .|++||||||+||++  +.++.++|+|||++...
T Consensus        76 ~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~--~~i~H~dl~p~nil~--~~~~~~~l~dfg~~~~~  150 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHK--HNCIHRDVKPENILI--TKQGQIKLCDFGFARIL  150 (286)
T ss_pred             EEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCChhhEEE--cCCCcEEECccccceec
Confidence            9999999886665544332 358999999999999999999995  589999999999999  67788999999999766


Q ss_pred             CCcc---ccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....   ....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..+....+....+........... 
T Consensus       151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (286)
T cd07847         151 TGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS-  229 (286)
T ss_pred             CCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc-
Confidence            4322   23467889999999876 457899999999999999999999999988777776666554432221111000 


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...++...                ..|.......+...               .......+.+||.+||+.||++|||+.
T Consensus       230 ~~~~~~~~----------------~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~  278 (286)
T cd07847         230 TNQFFKGL----------------SIPEPETREPLESK---------------FPNISSPALSFLKGCLQMDPTERLSCE  278 (286)
T ss_pred             cccccccc----------------cCCCcccccCHHHH---------------hccCCHHHHHHHHHHhcCCccccCCHH
Confidence            00011100                00000000000000               000123678999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      |++.||||
T Consensus       279 eil~~~~f  286 (286)
T cd07847         279 ELLEHPYF  286 (286)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.4e-42  Score=352.84  Aligned_cols=253  Identities=26%  Similarity=0.292  Sum_probs=205.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-CeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ...|.+.+.||+|+||.||+|.+..+ +..||+|.+..... ....+..|+.++..+     .|||||+++++|...+++
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-----~Hpniv~~~~~~~~~~~~  140 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-----DHFGIVKHFDDFKSDDKL  140 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEEECCEE
Confidence            34599999999999999999998877 78899997753322 123445577666655     899999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        187 CLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ||||||+++ +|.+++...  ....+++..+..++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus       141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~--~ivHrDlkp~NIll--~~~~~~kL~DFgla  216 (478)
T PTZ00267        141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR--KMMHRDLKSANIFL--MPTGIIKLGDFGFS  216 (478)
T ss_pred             EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--CEEECCcCHHhEEE--CCCCcEEEEeCcCc
Confidence            999999955 888877542  234589999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        264 CHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       264 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ......     ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+......|...   
T Consensus       217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~---  293 (478)
T PTZ00267        217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPC---  293 (478)
T ss_pred             eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCc---
Confidence            876432     234578999999999999999999999999999999999999999888776666654321110000   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                 .....+.+||.+||..||.+|
T Consensus       294 -----------------------------------------------------------~~s~~~~~li~~~L~~dP~~R  314 (478)
T PTZ00267        294 -----------------------------------------------------------PVSSGMKALLDPLLSKNPALR  314 (478)
T ss_pred             -----------------------------------------------------------cCCHHHHHHHHHHhccChhhC
Confidence                                                                       000157899999999999999


Q ss_pred             CCHHHHhcCCCcCc
Q psy11727        419 ISPTNVLRHEFFLK  432 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~  432 (437)
                      ||+.+++.|||++.
T Consensus       315 ps~~~~l~~~~~~~  328 (478)
T PTZ00267        315 PTTQQLLHTEFLKY  328 (478)
T ss_pred             cCHHHHHhCHHHHH
Confidence            99999999999864

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-42  Score=359.52  Aligned_cols=293  Identities=22%  Similarity=0.343  Sum_probs=206.8

Q ss_pred             ecCceeccCeeeeceecccCceEEEEEEEcCCC-eEEEEE------------------EecCCcccchHHHHHHHHHHHh
Q psy11727        103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIK------------------IIKNKKPFLNQAQIEVQLLEKI  163 (437)
Q Consensus       103 ~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~-~~vaiK------------------~i~~~~~~~~~~~~e~~~~~~l  163 (437)
                      ..+..+.++|++.+.||+|+||+||+|..+... ..+++|                  .+.........+..|+.++..+
T Consensus       141 ~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l  220 (501)
T PHA03210        141 KHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL  220 (501)
T ss_pred             ccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC
Confidence            445567789999999999999999998754322 222222                  2222222234456777777776


Q ss_pred             hhcCCCCCcEEEecceeeECCEEEEEEEeccCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q psy11727        164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNF---HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL  240 (437)
Q Consensus       164 ~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~---~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi  240 (437)
                           .|+|||++++++...+..|+|+|++.++|++++.....   .......++.++.||+.||.|||++  |||||||
T Consensus       221 -----~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~--gIiHrDL  293 (501)
T PHA03210        221 -----NHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK--KLIHRDI  293 (501)
T ss_pred             -----CCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC--CeecCCC
Confidence                 78999999999999999999999999999887754321   2245677889999999999999964  8999999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCC-CCCC
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP-LFSG  315 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~-pf~~  315 (437)
                      ||+|||+  +.++.+||+|||++......    ....+||..|+|||++.+..++.++|||||||++|||++|.. ||..
T Consensus       294 KP~NILl--~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~  371 (501)
T PHA03210        294 KLENIFL--NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGD  371 (501)
T ss_pred             CHHHEEE--CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccC
Confidence            9999999  67888999999999766432    224579999999999999999999999999999999999875 4432


Q ss_pred             --CCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCC
Q psy11727        316 --KNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP  393 (437)
Q Consensus       316 --~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (437)
                        .+....+.+++..++.+...+....   .+.|+.+....+...            ...+...+.. .           
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~i~~~~~~~~------------~~~~~~~~~~-~-----------  424 (501)
T PHA03210        372 GGGKPGKQLLKIIDSLSVCDEEFPDPP---CKLFDYIDSAEIDHA------------GHSVPPLIRN-L-----------  424 (501)
T ss_pred             CCCCHHHHHHHHHHhcccChhhcCCcH---HHHHHHhhhhhcccC------------ccchhhHHHh-c-----------
Confidence              3445566666666554443322111   112221111000000            0001111100 0           


Q ss_pred             CCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       394 ~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                          .....+.++|.+||.+||.+|||+.|+|.||||.....
T Consensus       425 ----~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        425 ----GLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             ----CCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence                00125789999999999999999999999999987543

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=5.5e-42  Score=326.49  Aligned_cols=254  Identities=26%  Similarity=0.444  Sum_probs=202.2

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC----
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK----  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~----  183 (437)
                      ..+.|++.+.||+|+||+||+|.+..+++.||+|++............|+.++..+.    .|+||++++++|...    
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc----CCCCeeeEeeEEeecCCCC
Confidence            356799999999999999999999999999999999765444456677887777663    589999999998753    


Q ss_pred             --CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 --NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 --~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                        ..+++||||+++ +|.+++.......+++..+..++.|++.||+|||++  ||+|+||||+||++  +.++.++|+||
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~--~ivh~dl~~~nili--~~~~~~~l~Df  155 (272)
T cd06637          80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH--KVIHRDIKGQNVLL--TENAEVKLVDF  155 (272)
T ss_pred             CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCHHHEEE--CCCCCEEEccC
Confidence              578999999965 888888765545689999999999999999999964  89999999999999  67888999999


Q ss_pred             CCceecCCc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        261 GSSCHVGQT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       261 G~s~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      |++......   .....|+..|+|||++.     +..++.++|+|||||++|||++|.+||...........+...   +
T Consensus       156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~  232 (272)
T cd06637         156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---P  232 (272)
T ss_pred             CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---C
Confidence            998765322   23457889999999986     346888999999999999999999999765543332222110   0


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ...                                                      .....    -...+.+||.+||.
T Consensus       233 ~~~------------------------------------------------------~~~~~----~~~~~~~li~~~l~  254 (272)
T cd06637         233 APR------------------------------------------------------LKSKK----WSKKFQSFIESCLV  254 (272)
T ss_pred             CCC------------------------------------------------------CCCCC----cCHHHHHHHHHHcC
Confidence            000                                                      00000    00157899999999


Q ss_pred             cCCCCCCCHHHHhcCCCc
Q psy11727        413 YDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~  430 (437)
                      .||.+|||+.+++.||||
T Consensus       255 ~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         255 KNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CChhhCCCHHHHhhCCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.6e-41  Score=329.37  Aligned_cols=281  Identities=31%  Similarity=0.500  Sum_probs=213.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||||.+.....   .......|+.+++.+     .||||+++++++...+ 
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   85 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAT   85 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-----CCCCccceEEEEecccc
Confidence            5689999999999999999999999999999999864321   122345677777766     7889999999887643 


Q ss_pred             -------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        185 -------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       185 -------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                             ..++||||++++|.+.+.... ..+++..++.++.||+.||+|||++  |++|+||||+||++  +.++.+||
T Consensus        86 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--~i~H~dl~p~nil~--~~~~~~kl  160 (310)
T cd07865          86 PYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRN--KILHRDMKAANILI--TKDGILKL  160 (310)
T ss_pred             cccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHEEE--CCCCcEEE
Confidence                   469999999999988887654 3589999999999999999999964  89999999999999  67889999


Q ss_pred             EeCCCceecCCcc-------ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        258 IDFGSSCHVGQTL-------YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       258 ~DFG~s~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      +|||++.......       ....++..|+|||++.+. .++.++|+||||+++|+|++|.+||.+.+.......+....
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~  240 (310)
T cd07865         161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC  240 (310)
T ss_pred             CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            9999987553221       234567889999998764 47889999999999999999999999988888888887777


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      +.++..+.+...... .++....     ...  .       .......+                ........+.+||.+
T Consensus       241 ~~~~~~~~~~~~~~~-~~~~~~~-----~~~--~-------~~~~~~~l----------------~~~~~~~~~~dli~~  289 (310)
T cd07865         241 GSITPEVWPGVDKLE-LFKKMEL-----PQG--Q-------KRKVKERL----------------KPYVKDPHALDLIDK  289 (310)
T ss_pred             CCCChhhcccccchh-hhhhccC-----CCc--c-------chhhHHhc----------------ccccCCHHHHHHHHH
Confidence            777766655442211 1111000     000  0       00000000                000011256899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCc
Q psy11727        410 MLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ||..||.+|||+.++|+||||
T Consensus       290 ~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         290 LLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HhcCChhhccCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-42  Score=335.85  Aligned_cols=282  Identities=31%  Similarity=0.524  Sum_probs=216.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|.+...  .........|+.++..+     .|+||+++++++...  
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~   77 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-----KHENIIGILDIIRPPSF   77 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCcCchhheeecccc
Confidence            357899999999999999999999999999999998632  22334455677777766     588999999887644  


Q ss_pred             ---CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 ---NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 ---~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                         .+.++|+|+++++|.+.+...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~--~ivH~dlkp~Nill--~~~~~~kl~df  150 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSA--NVLHRDLKPSNLLL--NTNCDLKICDF  150 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCCHHHEEE--CCCCCEEECcc
Confidence               368999999999998887653   489999999999999999999964  89999999999999  67888999999


Q ss_pred             CCceecCCc------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        261 GSSCHVGQT------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       261 G~s~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |++......      .....|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+.+.++.|+
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~  230 (336)
T cd07849         151 GLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS  230 (336)
T ss_pred             cceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            998765322      123467889999998765 4689999999999999999999999999888888888888888776


Q ss_pred             hhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        334 GYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       334 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ...+......  ..++...+..                ....+....                  ......+.+||.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~------------------~~~~~~~~~li~~~l  276 (336)
T cd07849         231 QEDLNCIISLRARNYIKSLPFK----------------PKVPWNKLF------------------PNADPKALDLLDKML  276 (336)
T ss_pred             HHHHHHhhchhhhhHHhhcCcC----------------CcccHHHHh------------------cccCcHHHHHHHHHc
Confidence            5544322110  1111000000                000000000                  011235789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +.||.+|||+.|+++||||.+.-+
T Consensus       277 ~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         277 TFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             CCChhhCcCHHHHhcCccccccCC
Confidence            999999999999999999987643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=7.2e-42  Score=335.37  Aligned_cols=295  Identities=20%  Similarity=0.262  Sum_probs=200.2

Q ss_pred             eeceeccc--CceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        114 IDTLLGKG--SFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       114 i~~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +.++||+|  +||+||++.+..+|+.||+|++....   ........|+.+++.+     .||||++++++|..++..++
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~hpniv~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-----NHPNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEEECCEEEE
Confidence            56789999  78999999999999999999997432   2223455566666655     78999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++......++++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.++++||+.+....
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~--~~iiH~dlkp~Nil~--~~~~~~~l~~~~~~~~~~  152 (327)
T cd08227          77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILI--SVDGKVYLSGLRSNLSMI  152 (327)
T ss_pred             EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCChhhEEE--ecCCcEEEcccchhhccc
Confidence            9999965 78888876544568999999999999999999995  489999999999999  667789999998654321


Q ss_pred             C----------ccccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        268 Q----------TLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       268 ~----------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      .          ......++..|+|||++.+  ..++.++|||||||++|||++|.+||..............  +..+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~  230 (327)
T cd08227         153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCL  230 (327)
T ss_pred             cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCcccc
Confidence            1          0112345677999999976  4689999999999999999999999987655443332221  211111


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      + .....        +...+..+.................      ...+.................+.+||.+||++||
T Consensus       231 ~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  295 (327)
T cd08227         231 L-DTTTI--------PAEELTMKPSRSGANSGLGESTTVS------TPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNP  295 (327)
T ss_pred             c-cccch--------hhhhcccCCcccCCcCCCCcccccC------CcCccccCCcccccccccCHHHHHHHHHHHhhCc
Confidence            0 00000        0000000000000000000000000      0000000000000111223468999999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||++|+++||||++..
T Consensus       296 ~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         296 DARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             hhcCCHHHHhcChhhhhcc
Confidence            9999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0197|consensus

Probab=100.00  E-value=1.1e-42  Score=340.69  Aligned_cols=244  Identities=25%  Similarity=0.332  Sum_probs=212.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +.+.+++.||+|-||.||.|....+ ..||+|.++...-....+.+|+.+|..+     .|++||++++++..++.+|||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L-----~H~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKL-----RHEKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhC-----cccCeEEEEEEEecCCceEEE
Confidence            3466789999999999999987544 4799999987666667888999999998     788999999999998899999


Q ss_pred             EEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||| .|+|.++|+......+.......|+.|||.|++||.++  ++|||||...||||  +++..+||+|||+|+...+
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~--~~IHRDLAARNiLV--~~~~~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK--NYIHRDLAARNILV--DEDLVVKISDFGLARLIGD  355 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC--Cccchhhhhhheee--ccCceEEEcccccccccCC
Confidence            9999 56899999986667799999999999999999999975  69999999999999  7788999999999997666


Q ss_pred             cccccc-c---cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLYQYI-Q---SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~~~~-g---t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..++.. |   ...|.|||.+....++.+||||||||+|+||+| |+.||.+.+..+.++.+.++..+|.+..++     
T Consensus       356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP-----  430 (468)
T KOG0197|consen  356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCP-----  430 (468)
T ss_pred             CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCC-----
Confidence            555432 2   245999999999999999999999999999999 999999999999999998887777654332     


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                               ..+.+++..|+..+|++|||.+.
T Consensus       431 ---------------------------------------------------------~~vY~lM~~CW~~~P~~RPtF~~  453 (468)
T KOG0197|consen  431 ---------------------------------------------------------DEVYELMKSCWHEDPEDRPTFET  453 (468)
T ss_pred             ---------------------------------------------------------HHHHHHHHHHhhCCcccCCCHHH
Confidence                                                                     14678999999999999999886


Q ss_pred             Hh
Q psy11727        424 VL  425 (437)
Q Consensus       424 ~l  425 (437)
                      +.
T Consensus       454 L~  455 (468)
T KOG0197|consen  454 LR  455 (468)
T ss_pred             HH
Confidence            54

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.1e-41  Score=328.27  Aligned_cols=252  Identities=31%  Similarity=0.468  Sum_probs=209.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||++.+..+++.||+|++....    ........|+.++..+     .|+||+++++++.+.+.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-----RHPFLVNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCccceeeEEEcCCe
Confidence            47999999999999999999999999999999986422    1234455677777665     68999999999999999


Q ss_pred             EEEEEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+ +++|.+++...  ..+++..+..++.||+.||.|||+  .|++|+||+|+|||+  +.++.+||+|||++.
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~--~~i~H~dl~p~nili--~~~~~~kl~dfg~~~  149 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHS--LDIVYRDLKPENLLL--DSDGYIKITDFGFAK  149 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEE--CCCCCEEEeeCCCcc
Confidence            99999999 55899888765  358999999999999999999995  489999999999999  678889999999998


Q ss_pred             ecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..........++..|+|||.+.+..++.++|+||||+++|+|++|.+||...+.....+.+.......|.          
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------  219 (290)
T cd05580         150 RVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----------  219 (290)
T ss_pred             ccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc----------
Confidence            7766556667899999999999888999999999999999999999999887765555554321000000          


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----  419 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----  419 (437)
                                                                           .....+.++|++||+.||.+|+     
T Consensus       220 -----------------------------------------------------~~~~~l~~li~~~l~~~p~~R~~~~~~  246 (290)
T cd05580         220 -----------------------------------------------------FFSPDAKDLIRNLLQVDLTKRLGNLKN  246 (290)
T ss_pred             -----------------------------------------------------cCCHHHHHHHHHHccCCHHHccCcccC
Confidence                                                                 0012578999999999999999     


Q ss_pred             CHHHHhcCCCcCcCCC
Q psy11727        420 SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~~  435 (437)
                      +++++++||||+...+
T Consensus       247 ~~~~l~~~~~~~~~~~  262 (290)
T cd05580         247 GVNDIKNHPWFAGIDW  262 (290)
T ss_pred             CHHHHHcCcccccCCH
Confidence            9999999999987653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.1e-42  Score=365.95  Aligned_cols=264  Identities=29%  Similarity=0.438  Sum_probs=207.1

Q ss_pred             ecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       103 ~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ..++.+.++|++.+.||+|+||+||+|.+..++..||+|++....   .....+..|+.++..+     .|||||+++++
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-----~HPNIVrl~d~   80 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-----KHKNIVRYIDR   80 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEE
Confidence            456677889999999999999999999999999999999986432   2234566688877776     78999999999


Q ss_pred             eeE--CCEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCC-----CCeeeCCCCCCcEEEec
Q psy11727        180 FTW--KNHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPE-----LSIIHCDLKPENILLCS  249 (437)
Q Consensus       180 ~~~--~~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~-----~giiHrDiKp~NIll~~  249 (437)
                      |.+  ...+||||||+++ +|.++|...  ....+++..++.|+.||+.||+|||+..     .+||||||||+||||+.
T Consensus        81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            865  4579999999965 898888652  2345899999999999999999999632     35999999999999953


Q ss_pred             C---------------CCCCEEEEeCCCceecCCc--cccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCC
Q psy11727        250 P---------------KRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGE  310 (437)
Q Consensus       250 ~---------------~~~~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~  310 (437)
                      +               ..+.+||+|||++......  .....||+.|+|||++.+  ..++.++||||||||||+|++|.
T Consensus       161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk  240 (1021)
T PTZ00266        161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK  240 (1021)
T ss_pred             CccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence            2               2345999999999765432  234578999999999965  45889999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCC
Q psy11727        311 PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRR  390 (437)
Q Consensus       311 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (437)
                      +||...+....+...+...  |. ...                                                     
T Consensus       241 ~PF~~~~~~~qli~~lk~~--p~-lpi-----------------------------------------------------  264 (1021)
T PTZ00266        241 TPFHKANNFSQLISELKRG--PD-LPI-----------------------------------------------------  264 (1021)
T ss_pred             CCCCcCCcHHHHHHHHhcC--CC-CCc-----------------------------------------------------
Confidence            9998766544433322210  00 000                                                     


Q ss_pred             CCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        391 NEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       391 ~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                        .+    ....+.+||.+||..+|.+|||+.|+|.||||+..
T Consensus       265 --~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        265 --KG----KSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             --CC----CCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence              00    01257899999999999999999999999999754

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-41  Score=326.07  Aligned_cols=276  Identities=33%  Similarity=0.556  Sum_probs=217.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      |++.+.||.|++|+||+|.+..+|..||+|++.....   ....+..|+.+++.+     .|+|++++++++.+.+..++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~~~~iv~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-----NHPNIVRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-----CCCCccCHhheeccCCeEEE
Confidence            6788999999999999999999999999999874321   224456688777766     68999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      ||||++++|.+++.......+++..+..++.|++.||+|||++  +++||||+|+||++  +.++.++|+|||++.....
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~--~~~H~dl~p~nil~--~~~~~~~l~df~~~~~~~~  151 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH--RVLHRDLKPQNLLI--DREGALKLADFGLARAFGV  151 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCHHHEEE--cCCCcEEEeecccccccCC
Confidence            9999988999988776545689999999999999999999964  89999999999999  5688899999999875532


Q ss_pred             cc---ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        269 TL---YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       269 ~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   ....++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+....+..+.+..+.|....++......
T Consensus       152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07835         152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP  231 (283)
T ss_pred             CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence            21   233567889999988764 57899999999999999999999999998888888888888888776654433222


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                      .+.........             +   ....                  ........+.+||.+||+.||.+|||++|+
T Consensus       232 ~~~~~~~~~~~-------------~---~~~~------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i  277 (283)
T cd07835         232 DYKPTFPKWAR-------------Q---DLSK------------------VVPNLDEDGLDLLSKMLVYDPAKRISAKAA  277 (283)
T ss_pred             hhhhhcccccc-------------c---chhh------------------hcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            22111111000             0   0000                  000011257899999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      +.||||
T Consensus       278 l~~~~~  283 (283)
T cd07835         278 LQHPYF  283 (283)
T ss_pred             hcCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0579|consensus

Probab=100.00  E-value=8.6e-44  Score=350.26  Aligned_cols=257  Identities=32%  Similarity=0.496  Sum_probs=211.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +.|.|+..||.|+||.||+|.++.++...|.|+|..+. .....+..|+.|+...     +||+||+|++.|...+.++|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-----dHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-----DHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-----CChHHHHHHHHHhccCceEE
Confidence            45788999999999999999999999989999997543 3345566677777655     79999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec--
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--  266 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~--  266 (437)
                      +.|||+|+--+.+.-.-..+++++++..+++|++.||.|||++  .|||||||..|||+  .-+|.|+|+|||.|...  
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~--~iIHRDLKAGNiL~--TldGdirLADFGVSAKn~~  182 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ--NIIHRDLKAGNILL--TLDGDIRLADFGVSAKNKS  182 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc--chhhhhccccceEE--EecCcEeeecccccccchh
Confidence            9999988766655443346799999999999999999999986  59999999999999  45778999999998543  


Q ss_pred             -CCccccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 -GQTLYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 -~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                       .....+++||++|||||+...     .+|+.++||||||++|.||.-+.||-...+....+.+|.+  .-||...    
T Consensus       183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK--SePPTLl----  256 (1187)
T KOG0579|consen  183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPTLL----  256 (1187)
T ss_pred             HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh--cCCCccc----
Confidence             233456899999999999864     5899999999999999999999999998888777666644  1222111    


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                         .|.||..   .|.||+.+||..||..||+
T Consensus       257 ---------------------------------------------------qPS~Ws~---~F~DfLk~cL~Knp~~Rp~  282 (1187)
T KOG0579|consen  257 ---------------------------------------------------QPSHWSR---SFSDFLKRCLVKNPRNRPP  282 (1187)
T ss_pred             ---------------------------------------------------Ccchhhh---HHHHHHHHHHhcCCccCCC
Confidence                                                               1112211   5899999999999999999


Q ss_pred             HHHHhcCCCcCcCCC
Q psy11727        421 PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~  435 (437)
                      +.++|+|||++....
T Consensus       283 aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  283 AAQLLKHPFVQNAPS  297 (1187)
T ss_pred             HHHHhhCcccccCCc
Confidence            999999999997654

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.1e-42  Score=337.27  Aligned_cols=283  Identities=31%  Similarity=0.560  Sum_probs=223.9

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||.||+|++..++..||+|++....   ........|+.++..+     .|+||+++.+++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   86 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-----DHENVIGLLDVFTPA   86 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-----cCCCHHHHHHHhhcc
Confidence            34678999999999999999999999999999999986321   1223445677776665     789999999988766


Q ss_pred             CE------EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 NH------LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~~------~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +.      .++|+|+++++|.+++...   .+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nill--~~~~~~kL  159 (343)
T cd07851          87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHS--AGIIHRDLKPSNIAV--NEDCELKI  159 (343)
T ss_pred             ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEE--CCCCCEEE
Confidence            54      9999999988999988763   48999999999999999999995  589999999999999  66788999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +|||++...........++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+.+..+.|++.+
T Consensus       160 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  239 (343)
T cd07851         160 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL  239 (343)
T ss_pred             ccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence            999999877666666778899999999865 3678999999999999999999999999988888999999888888776


Q ss_pred             hccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      +.......  .|...+...             .   ...+..+                  .......+.+||.+||+.|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~------------------~~~~s~~l~dli~~~l~~~  285 (343)
T cd07851         240 LQKISSESARNYIQSLPQM-------------P---KKDFKEV------------------FSGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HhhccchhHHHHHHhcccc-------------C---CCCHHHH------------------hccCCHHHHHHHHHhCCCC
Confidence            65443210  111100000             0   0000000                  0001226899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      |.+|||+.++++||||++...
T Consensus       286 P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         286 PDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             hhhCCCHHHHhcCCCccccCC
Confidence            999999999999999988654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=7.9e-42  Score=352.36  Aligned_cols=254  Identities=28%  Similarity=0.336  Sum_probs=202.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ..++|.+.+.||+|+||+||+|.+..+++.||||++.....   .......|+.++..     +.|++|+++++.+...+
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-----~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN-----CDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc-----CCCCcEEEeecceeccc
Confidence            35699999999999999999999999999999999864322   12233445554443     47899999988776432


Q ss_pred             --------EEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        185 --------HLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       185 --------~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                              .+++||||+.+ +|.+++...  ....+++..+..++.|++.||+|||++  ||+||||||+|||+  +.++
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~--~IiHrDLKP~NILl--~~~~  180 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK--HMIHRDIKSANILL--CSNG  180 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEE--eCCC
Confidence                    47899999965 898888653  234589999999999999999999964  89999999999999  6688


Q ss_pred             CEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        254 AIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      .+||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~  260 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG  260 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence            8999999998765322     23467899999999999999999999999999999999999999988776666555331


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...+.                                   |                           ......+.+||.
T Consensus       261 ~~~~~-----------------------------------~---------------------------~~~~~~l~~li~  278 (496)
T PTZ00283        261 RYDPL-----------------------------------P---------------------------PSISPEMQEIVT  278 (496)
T ss_pred             CCCCC-----------------------------------C---------------------------CCCCHHHHHHHH
Confidence            11000                                   0                           000125789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCc
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      +||+.||.+|||+.++++|||++.
T Consensus       279 ~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        279 ALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHcccChhhCcCHHHHHhCHHHHH
Confidence            999999999999999999999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.8e-41  Score=326.95  Aligned_cols=281  Identities=35%  Similarity=0.525  Sum_probs=218.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|.++....   .......|+.++..+     .|+||+++++++...  
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~   78 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-----QHPNIVTVKEVVVGSNL   78 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-----CCCCEEEEEEEEEecCC
Confidence            3579999999999999999999999999999999974322   122345677777666     689999999999887  


Q ss_pred             CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        184 NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       184 ~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      +.+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++  |++|+||||+||++  +.++.++|+|||++
T Consensus        79 ~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--~i~H~dl~p~nili--~~~~~~~l~d~g~~  153 (293)
T cd07843          79 DKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN--WILHRDLKTSNLLL--NNRGILKICDFGLA  153 (293)
T ss_pred             CcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCCHHHEEE--CCCCcEEEeecCce
Confidence            8999999999999998887654 3589999999999999999999964  89999999999999  67889999999998


Q ss_pred             eecCCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        264 CHVGQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       264 ~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ......   .....++..|+|||++.+. .++.++|+||||+++|+|++|.+||.+.+..+.+.++....+.|+...++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (293)
T cd07843         154 REYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG  233 (293)
T ss_pred             eeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence            766443   2234568889999998764 468999999999999999999999999998888999988888887766543


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                      .......-.    ..+           ..+....+...                .........+.+||++||+.||++||
T Consensus       234 ~~~~~~~~~----~~~-----------~~~~~~~~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~R~  282 (293)
T cd07843         234 FSELPGAKK----KTF-----------TKYPYNQLRKK----------------FPALSLSDNGFDLLNRLLTYDPAKRI  282 (293)
T ss_pred             hhccchhcc----ccc-----------ccccchhhhcc----------------ccccCCChHHHHHHHHHhccCccccC
Confidence            322110000    000           00000000000                00000123578999999999999999


Q ss_pred             CHHHHhcCCCc
Q psy11727        420 SPTNVLRHEFF  430 (437)
Q Consensus       420 t~~e~l~Hp~~  430 (437)
                      |+.|+|.||||
T Consensus       283 t~~ell~~~~f  293 (293)
T cd07843         283 SAEDALKHPYF  293 (293)
T ss_pred             CHHHHhcCCCC
Confidence            99999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.3e-41  Score=324.29  Aligned_cols=277  Identities=31%  Similarity=0.531  Sum_probs=217.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +|++.+.||.|++|+||+|.+..++..||||.++....  .......|+.+++.+     .|+||+++++.+.+.+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-----KHENIVRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-----cCCCEeeeeeeEeeCCcEEE
Confidence            58899999999999999999999999999999874322  234555677777766     68999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSYNLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||++++|.+++.... ...+++..+..++.||+.||.|||+  .|++||||||+||++  ++++.++|+|||++....
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~h~dl~p~ni~~--~~~~~~~l~d~g~~~~~~  151 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE--NRVLHRDLKPQNLLI--NKRGELKLADFGLARAFG  151 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEE--CCCCcEEEeecchhhhhc
Confidence            99999999998886543 2458999999999999999999995  489999999999999  678889999999986553


Q ss_pred             Cc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..+....+.+..+.|....+......
T Consensus       152 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07836         152 IPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL  231 (284)
T ss_pred             CCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC
Confidence            32   1234568889999998764 5789999999999999999999999999988888888888777766555433322


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                      ..+....+...                ......+.                  ......+.++|.+||+.||.+|||+.+
T Consensus       232 ~~~~~~~~~~~----------------~~~~~~~~------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~  277 (284)
T cd07836         232 PEYKPTFPRYP----------------PQDLQQLF------------------PHADPLGIDLLHRLLQLNPELRISAHD  277 (284)
T ss_pred             chhcccccCCC----------------hHHHHHHh------------------hhcCcHHHHHHHHHhcCCcccCCCHHH
Confidence            11111000000                00000000                  001225789999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||||
T Consensus       278 ~l~~~~f  284 (284)
T cd07836         278 ALQHPWF  284 (284)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-41  Score=324.02  Aligned_cols=280  Identities=32%  Similarity=0.554  Sum_probs=216.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..   ......+..|+.+++.+     .|+||+++++++...+..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   75 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-----RHENIVNLKEAFRRKGRL   75 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-----CCCCeeehhheEEECCEE
Confidence            4799999999999999999999999999999998643   22345677788888877     588999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+++++.+.+.... ..+++..+..++.||+.||+|||.+  |++||||+|+||++  ++++.+||+|||++...
T Consensus        76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~--~i~H~dl~~~ni~~--~~~~~~kl~d~g~~~~~  150 (288)
T cd07833          76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH--NIIHRDIKPENILV--SESGVLKLCDFGFARAL  150 (288)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEE--CCCCCEEEEeeeccccc
Confidence            9999999887776655443 4589999999999999999999964  89999999999999  67889999999998765


Q ss_pred             CCc----cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQT----LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...    .....++..|+|||++.+. .++.++|+||||+++|+|++|++||.+.+..+.+..+....+..+..+.....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07833         151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS  230 (288)
T ss_pred             CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence            432    2345678899999999888 88999999999999999999999999988888888777776655554433222


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+- .                ...+.......+.              ..........+.+||++||..||++|||+
T Consensus       231 ~~~~~~-~----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  279 (288)
T cd07833         231 SNPRFA-G----------------VAFPEPSQPESLE--------------RRYPGKVSSPALDFLKACLRMDPKERLTC  279 (288)
T ss_pred             cCcccc-c----------------cccCCCCCcHHHH--------------HhcCCccchHHHHHHHHHhccCchhcccH
Confidence            111100 0                0000000000000              00000012367999999999999999999


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      +++++||||
T Consensus       280 ~~il~~~~f  288 (288)
T cd07833         280 DELLQHPYF  288 (288)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=8.7e-42  Score=335.77  Aligned_cols=282  Identities=30%  Similarity=0.518  Sum_probs=221.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   ........|+.+++.+     .|+||++++++|..   
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   78 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-----KHDNIIAIRDILRPPGA   78 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-----CCCCccCHHHhccccCC
Confidence            468999999999999999999999999999999987432   2234555677777776     68999999998863   


Q ss_pred             -CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 -KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 -~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       ...+++||||++++|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.+||+|||
T Consensus        79 ~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~Nil~--~~~~~~kl~dfg  152 (334)
T cd07855          79 DFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHS--ANVIHRDLKPSNLLV--NEDCELRIGDFG  152 (334)
T ss_pred             CCceEEEEEehhhhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--cCCCcEEecccc
Confidence             3578999999998998888654  348999999999999999999995  489999999999999  678899999999


Q ss_pred             CceecCCc-------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        262 SSCHVGQT-------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       262 ~s~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      ++......       .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+...++..+...+|.|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~  232 (334)
T cd07855         153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS  232 (334)
T ss_pred             cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence            98665321       123467889999999866 4688999999999999999999999999998889999999999998


Q ss_pred             hhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        334 GYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       334 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ...+......  ..++...+.                .....+.++.                  ......+.+||++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~------------------~~~~~~~~~li~~~l  278 (334)
T cd07855         233 EEVLNRIGSDRVRKYIQNLPR----------------KQPVPWSKIF------------------PKASPEALDLLSQML  278 (334)
T ss_pred             hHhhhhhchhhHHHHHhhccc----------------CCCCCHHHHc------------------ccCCHHHHHHHHHHc
Confidence            8776533211  011111000                0000000000                  011236899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +.||.+|||+.+++.||||.+...
T Consensus       279 ~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         279 QFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             cCChhhCcCHHHHHhChhhhhccC
Confidence            999999999999999999977543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.3e-41  Score=334.89  Aligned_cols=283  Identities=32%  Similarity=0.517  Sum_probs=218.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|.+.+.||+|+||+||+|.+..+++.||||.+...   .........|+.+++.+     .|+||+++++++... 
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~ni~~~~~~~~~~~   77 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-----DHENVIAIKDIMPPPH   77 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCccchHHheeccc
Confidence            356899999999999999999999999999999998642   11223455677777665     689999999988654 


Q ss_pred             ----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        184 ----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       184 ----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                          .++|+||||++++|.+++...  ..+++..+..++.||+.||.|||++  |++||||||+||++  +.++.+||+|
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~--~i~H~dlkp~Nil~--~~~~~~kL~D  151 (337)
T cd07858          78 REAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA--NVLHRDLKPSNLLL--NANCDLKICD  151 (337)
T ss_pred             ccccCcEEEEEeCCCCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEE--cCCCCEEECc
Confidence                358999999999999888764  3589999999999999999999964  89999999999999  6678899999


Q ss_pred             CCCceecCCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        260 FGSSCHVGQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       260 FG~s~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ||++......   .....++..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+.......+.+..+.++..
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  231 (337)
T cd07858         152 FGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE  231 (337)
T ss_pred             CccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence            9999765332   234567889999999875 468899999999999999999999999998888888888888877665


Q ss_pred             hhccCC--ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        336 LLHGAS--KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       336 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .+....  ....+....+..                               +.   .............+.+||++||+.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~-------------------------------~~---~~~~~~~~~~~~~~~~li~~~l~~  277 (337)
T cd07858         232 DLGFIRNEKARRYIRSLPYT-------------------------------PR---QSFARLFPHANPLAIDLLEKMLVF  277 (337)
T ss_pred             HhhhcCchhhhHHHHhcCcc-------------------------------cc---cCHHHHcccCCHHHHHHHHHHhcC
Confidence            442111  111111110000                               00   000000001123578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||.+|||++++++||||....+
T Consensus       278 ~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         278 DPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             ChhhccCHHHHHcCcchhhhcC
Confidence            9999999999999999987543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.3e-41  Score=325.81  Aligned_cols=256  Identities=25%  Similarity=0.421  Sum_probs=197.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|+||.||+|.+..++..||+|++....  .....+..|+.++..+     .||||+++++.+...+..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   75 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-----DSPYIIGFYGAFFVENRIS   75 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEECCEEE
Confidence            36888999999999999999999999999999986432  1223455677776655     7899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||||++++..+..     ..+++..+..++.|++.||.|||+  .||+|+||||+|||+  +.++.++|+|||++....
T Consensus        76 lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nill--~~~~~~~l~dfg~~~~~~  146 (279)
T cd06619          76 ICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWS--LKILHRDVKPSNMLV--NTRGQVKLCDFGVSTQLV  146 (279)
T ss_pred             EEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCCHHHEEE--CCCCCEEEeeCCcceecc
Confidence            99999977543322     236889999999999999999995  489999999999999  678899999999997654


Q ss_pred             Cc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ---MTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~---~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      .. .....|+..|+|||++.+..++.++|+|||||++|+|++|..||........   ..........+.          
T Consensus       147 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------  216 (279)
T cd06619         147 NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED----------  216 (279)
T ss_pred             cccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC----------
Confidence            33 3346789999999999999999999999999999999999999975322110   000000000000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                              .+                   ..  +  .......+.+||.+||+.||.+|||+++
T Consensus       217 ------------------------~~-------------------~~--~--~~~~~~~~~~li~~~l~~~P~~Rp~~~e  249 (279)
T cd06619         217 ------------------------PP-------------------VL--P--VGQFSEKFVHFITQCMRKQPKERPAPEN  249 (279)
T ss_pred             ------------------------CC-------------------CC--C--CCcCCHHHHHHHHHHhhCChhhCCCHHH
Confidence                                    00                   00  0  0001125789999999999999999999


Q ss_pred             HhcCCCcCcCCCC
Q psy11727        424 VLRHEFFLKHSVD  436 (437)
Q Consensus       424 ~l~Hp~~~~~~~~  436 (437)
                      +++||||+.....
T Consensus       250 il~~~~~~~~~~~  262 (279)
T cd06619         250 LMDHPFIVQYNDG  262 (279)
T ss_pred             HhcCcccccccCc
Confidence            9999999877543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.3e-41  Score=317.85  Aligned_cols=249  Identities=30%  Similarity=0.391  Sum_probs=203.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|.+.+.||+|++|.||+|.+..+++.|++|.+....   .....+..|+.++..+     .|+||+++++++...+..+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-----DSSYIIRYYESFLDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-----CCCCeehheeeeccCCEEE
Confidence            4788999999999999999999999999999986432   2233444566655554     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..+..++.|++.||.|||+  .|++|+||||+||++  +.++.++|+|||++...
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~--~~i~h~dl~~~nili--~~~~~~~l~df~~~~~~  151 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS--KKILHRDIKSLNLFL--DAYDNVKIGDLGVAKLL  151 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEE--eCCCCEEEcccccceec
Confidence            99999965 89998877644568999999999999999999995  589999999999999  56788999999998765


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....   ....++..|+|||++.+..++.++|+|||||++++|++|+.||...+.......+......+...        
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------  223 (256)
T cd08529         152 SDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ--------  223 (256)
T ss_pred             cCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc--------
Confidence            4322   23467889999999999999999999999999999999999999888665555543311100000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                            .....+.++|++||+.+|++||++.+
T Consensus       224 ------------------------------------------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~  249 (256)
T cd08529         224 ------------------------------------------------------MYSQQLAQLIDQCLTKDYRQRPDTFQ  249 (256)
T ss_pred             ------------------------------------------------------ccCHHHHHHHHHHccCCcccCcCHHH
Confidence                                                                  00125789999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++|||+
T Consensus       250 ll~~~~~  256 (256)
T cd08529         250 LLRNPSL  256 (256)
T ss_pred             HhhCCCC
Confidence            9999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2e-41  Score=333.17  Aligned_cols=280  Identities=31%  Similarity=0.516  Sum_probs=218.4

Q ss_pred             eccCeee-eceecccCceEEEEEEEcCCCeEEEEEEecCCcccc---------------hHHHHHHHHHHHhhhcCCCCC
Q psy11727        108 FLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL---------------NQAQIEVQLLEKINKADIHSR  171 (437)
Q Consensus       108 ~~~~y~i-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------~~~~~e~~~~~~l~~~~~~h~  171 (437)
                      +.++|.. .+.||+|+||+||+|.+..+++.||||+++......               ..+..|+.++..+     .|+
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~   80 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-----KHE   80 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-----CCc
Confidence            4567875 577999999999999999999999999986432211               1345677777666     689


Q ss_pred             cEEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      ||+++++++...++.++|||+++++|.+++...  ..+++..+..++.||+.||+|||+  .|++|+||+|+||++  +.
T Consensus        81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~--~~i~H~dl~~~nill--~~  154 (335)
T PTZ00024         81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHK--WYFMHRDLSPANIFI--NS  154 (335)
T ss_pred             ceeeeeEEEecCCcEEEEEeccccCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHeEE--CC
Confidence            999999999999999999999999999988764  348999999999999999999995  489999999999999  67


Q ss_pred             CCCEEEEeCCCceecCC-----------------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCC
Q psy11727        252 RSAIKIIDFGSSCHVGQ-----------------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~-----------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf  313 (437)
                      ++.++|+|||++.....                 ......++..|+|||++.+. .++.++|+|||||++|+|++|.+||
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~  234 (335)
T PTZ00024        155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF  234 (335)
T ss_pred             CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            88899999999876541                 11123457789999999764 4789999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCC
Q psy11727        314 SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP  393 (437)
Q Consensus       314 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (437)
                      .+.+..+.+..+.+..+.|+...++.......+......                 .......+.               
T Consensus       235 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~---------------  282 (335)
T PTZ00024        235 PGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR-----------------KPKDLKTIF---------------  282 (335)
T ss_pred             CCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC-----------------CcccHHHhC---------------
Confidence            999999999999998888877655443322111100000                 000000000               


Q ss_pred             CCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       394 ~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                         ......+.+||.+||+.||.+|||++|+|.||||+..
T Consensus       283 ---~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        283 ---PNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             ---cCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence               0011257899999999999999999999999999865

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=4.4e-41  Score=317.43  Aligned_cols=249  Identities=27%  Similarity=0.411  Sum_probs=200.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-CCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-KNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-~~~~  186 (437)
                      +|++.+.||+|++|.||++.+..+++.||+|.+.....   .......|+.+++.+     .|+|++++.+.+.. ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-----KHPNIVAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeecCCCCEE
Confidence            48999999999999999999999999999999864322   223445566666555     68899999998764 4478


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++.......+++..+..++.|++.||++||+  .|++|+||||+||++  +.++.++|+|||++..
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~--~~i~H~di~p~nil~--~~~~~~~l~df~~~~~  151 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE--KHILHRDLKTQNVFL--TRTNIIKVGDLGIARV  151 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCchhEEE--ecCCcEEEecccceEE
Confidence            999999965 78888876554568999999999999999999995  489999999999999  6688899999999876


Q ss_pred             cCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....   .....++..|+|||++.+..++.++|+|||||++++|++|+.||.+.+.......+......+..        
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------  223 (257)
T cd08223         152 LENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMP--------  223 (257)
T ss_pred             ecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCc--------
Confidence            5322   23456788999999999999999999999999999999999999887765555444331100000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                            ......+.+||.+||+.||.+|||+.
T Consensus       224 ------------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~  249 (257)
T cd08223         224 ------------------------------------------------------KDYSPELGELIATMLSKRPEKRPSVK  249 (257)
T ss_pred             ------------------------------------------------------cccCHHHHHHHHHHhccCcccCCCHH
Confidence                                                                  00012578999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      +++.||||
T Consensus       250 ~~l~~~~~  257 (257)
T cd08223         250 SILRQPYI  257 (257)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.9e-41  Score=329.65  Aligned_cols=291  Identities=26%  Similarity=0.383  Sum_probs=208.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....  ....++..|+.++..+     .|+||++++++|.++++++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   75 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-----NSPYIVGFYGAFYSDGEIS   75 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCEEE
Confidence            36999999999999999999999999999999986432  2234456677777765     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...  ..+++..+..++.|++.||.|||+. .+++||||||+|||+  +.++.++|+|||++...
T Consensus        76 lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~--~~~~~~~l~dfg~~~~~  150 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILV--NSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             EEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEE--ecCCcEEEccCCCcccc
Confidence            99999965 888888765  4589999999999999999999963 479999999999999  66788999999998654


Q ss_pred             CCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        267 GQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       267 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      ... .....++..|+|||++.+..++.++|+|||||++|+|++|+.||...+.... ..+.   ...+............
T Consensus       151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~  226 (308)
T cd06615         151 IDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMF---GRPVSEGEAKESHRPV  226 (308)
T ss_pred             cccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhh---cCccccccccCCcccc
Confidence            322 2345788999999999888899999999999999999999999987653322 2221   1111111000000000


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccC-CCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVD-NGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                      .......+......++.... ...+.    ..+.  ......+.+||.+||..||++|||+.++
T Consensus       227 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~l  284 (308)
T cd06615         227 ----------------SGHPPDSPRPMAIFELLDYIVNEPPP----KLPS--GAFSDEFQDFVDKCLKKNPKERADLKEL  284 (308)
T ss_pred             ----------------cCCCCCccchhhHHHHHHHHhcCCCc----cCcC--cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                            00000000000000000000 00000    0000  0122358999999999999999999999


Q ss_pred             hcCCCcCcCCCC
Q psy11727        425 LRHEFFLKHSVD  436 (437)
Q Consensus       425 l~Hp~~~~~~~~  436 (437)
                      ++||||.+.+.+
T Consensus       285 l~~~~~~~~~~~  296 (308)
T cd06615         285 TKHPFIKRAELE  296 (308)
T ss_pred             hcChhhhhcccc
Confidence            999999886543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-41  Score=334.46  Aligned_cols=281  Identities=31%  Similarity=0.579  Sum_probs=218.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|.+.+.||+|+||.||+|.+..+++.||+|.+....   ........|+.+++.+     .|+||++++++|... 
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~   87 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-----QHENVIGLLDVFTSAV   87 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-----CCCCccchhheecccc
Confidence            3578999999999999999999999999999999986421   1223456677777665     789999999998754 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ..+++|+|++..+|..+..    ..+++..+..++.|++.||+|||++  |++||||||+||++  +.++.++|+
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~--~i~H~dlkp~NIll--~~~~~~kL~  159 (342)
T cd07879          88 SGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA--GIIHRDLKPGNLAV--NEDCELKIL  159 (342)
T ss_pred             cCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCCEEEe
Confidence                 3579999999877766542    2489999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       259 DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |||++...........++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....+..+....+.++..+.
T Consensus       160 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (342)
T cd07879         160 DFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV  239 (342)
T ss_pred             eCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            99999776555555678889999999876 46889999999999999999999999999888888899888888877665


Q ss_pred             ccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      .......  .+....+               ..+ ...+...                  .......+.+||++||+.||
T Consensus       240 ~~~~~~~~~~~~~~~~---------------~~~-~~~~~~~------------------~~~~~~~~~~li~~~l~~dP  285 (342)
T cd07879         240 QKLEDKAAKSYIKSLP---------------KYP-RKDFSTL------------------FPKASPQAVDLLEKMLELDV  285 (342)
T ss_pred             HHhcccchHHHHhhcC---------------Ccc-cchHHHH------------------hcCCCHHHHHHHHHHcCCCh
Confidence            4332211  0000000               000 0000000                  00012257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCCC
Q psy11727        416 KKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+|||+++++.||||....+
T Consensus       286 ~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         286 DKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             hhCcCHHHHhcCcchhhccc
Confidence            99999999999999987643

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-41  Score=329.77  Aligned_cols=255  Identities=28%  Similarity=0.439  Sum_probs=206.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|.+..+++.||+|.+.....    ....+..|+.++..+     .|+||+++++.+...+.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-----DHPFLPTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-----CCCCchhheeeeecCCE
Confidence            379999999999999999999999999999999975432    223455566666655     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .|+||||+.+ +|.+++.......+++..++.++.|++.||+|||+  .|++|+||||+||++  +.++.++|+|||++.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili--~~~~~~~l~dfg~~~  151 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL--LGIVYRDLKPENILL--HESGHIMLSDFDLSK  151 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChHHeEE--cCCCCEEEeecchhh
Confidence            9999999965 89998876555668999999999999999999995  589999999999999  667889999999975


Q ss_pred             ecCCc--------------------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        265 HVGQT--------------------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       265 ~~~~~--------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      .....                                .....|+..|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~p  231 (316)
T cd05574         152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP  231 (316)
T ss_pred             cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence            43211                                1123678889999999998999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+.+....+..+.......+                                    ..                     
T Consensus       232 f~~~~~~~~~~~~~~~~~~~~------------------------------------~~---------------------  254 (316)
T cd05574         232 FKGSNRDETFSNILKKEVTFP------------------------------------GS---------------------  254 (316)
T ss_pred             CCCCchHHHHHHHhcCCccCC------------------------------------Cc---------------------
Confidence            998877666555432100000                                    00                     


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCC----HHHHhcCCCcCcCC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRIS----PTNVLRHEFFLKHS  434 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t----~~e~l~Hp~~~~~~  434 (437)
                          ......+.+||.+||+.||++|||    ++++|+||||++..
T Consensus       255 ----~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         255 ----PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             ----cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence                001125799999999999999999    99999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-41  Score=319.38  Aligned_cols=249  Identities=27%  Similarity=0.445  Sum_probs=199.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc------cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      +.|.+.+.||+|++|.||+|.+..+++.||+|.+.....      ....+.+|+.++..+     .|+||+++++++...
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-----QHERIVQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEccC
Confidence            468999999999999999999999999999999864321      123445566666555     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++|||++++ +|.+++....  .+++..++.++.|++.||+|||+  .||+||||+|+||++  +.++.++|+|||+
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nilv--~~~~~~~l~dfg~  150 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHS--NMIVHRDIKGANILR--DSAGNVKLGDFGA  150 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--cCCCCEEEeeccc
Confidence            999999999965 7888887653  48999999999999999999995  589999999999999  6678899999999


Q ss_pred             ceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        263 SCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       263 s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +.......      ....++..|+|||++.+..++.++||||||+++|+|++|++||...+.......+......+.   
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---  227 (263)
T cd06625         151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ---  227 (263)
T ss_pred             ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC---
Confidence            86543211      234577889999999998999999999999999999999999987655444333321100000   


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                     .|                           ......+.+||.+||..||.
T Consensus       228 -------------------------------~~---------------------------~~~~~~~~~li~~~l~~~p~  249 (263)
T cd06625         228 -------------------------------LP---------------------------SHVSPDARNFLRRTFVENAK  249 (263)
T ss_pred             -------------------------------CC---------------------------ccCCHHHHHHHHHHhhcCcc
Confidence                                           00                           00112578999999999999


Q ss_pred             CCCCHHHHhcCCCc
Q psy11727        417 KRISPTNVLRHEFF  430 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~  430 (437)
                      +|||+.++++||||
T Consensus       250 ~Rpt~~~ll~~~~~  263 (263)
T cd06625         250 KRPSAEELLRHFFV  263 (263)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.7e-41  Score=323.79  Aligned_cols=254  Identities=28%  Similarity=0.458  Sum_probs=201.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----  182 (437)
                      ..+.|++.+.||+|+||+||+|.+..+++.+|+|++............|+.++..+.    .|+||++++++|..     
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS----HHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc----CCCcEEEEeeehhcccccC
Confidence            356899999999999999999999999999999998755444455667777777763    68999999999853     


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       .+++|+||||+++ +|.+++.......+++..+..++.||+.||+|||++  ||+|+||||+||++  +.++.++|+||
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--~ivH~dl~~~nili--~~~~~~~l~df  165 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH--KVIHRDIKGQNVLL--TENAEVKLVDF  165 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCCEEEeeC
Confidence             4689999999966 788888765555688999999999999999999964  89999999999999  67788999999


Q ss_pred             CCceecCCc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        261 GSSCHVGQT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       261 G~s~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      |++......   .....|+..|+|||++.     +..++.++|+|||||++|+|++|.+||...........+..   .+
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~---~~  242 (282)
T cd06636         166 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NP  242 (282)
T ss_pred             cchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh---CC
Confidence            998755322   23456889999999986     34688899999999999999999999976554333222111   00


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +....                                                      ..    .....+.+||.+||+
T Consensus       243 ~~~~~------------------------------------------------------~~----~~~~~~~~li~~cl~  264 (282)
T cd06636         243 PPKLK------------------------------------------------------SK----KWSKKFIDFIEGCLV  264 (282)
T ss_pred             CCCCc------------------------------------------------------cc----ccCHHHHHHHHHHhC
Confidence            00000                                                      00    001257999999999


Q ss_pred             cCCCCCCCHHHHhcCCCc
Q psy11727        413 YDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~  430 (437)
                      .||.+|||+.|+++||||
T Consensus       265 ~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         265 KNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.1e-41  Score=332.28  Aligned_cols=282  Identities=28%  Similarity=0.527  Sum_probs=219.2

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +.++|++.+.||+|+||.||+|.+..++..||||++.....   ....+..|+.+++.+     .|+||+++++++....
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   87 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----KHENVIGLLDVFTPDL   87 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCccceeeeecCCc
Confidence            46789999999999999999999999999999999853221   223455677777766     6899999999987653


Q ss_pred             ------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        185 ------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       185 ------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                            .+++|||+++++|.+++...   .+++..++.++.||+.||+|||.  .||+||||||+||++  +.++.++|+
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~--~gi~H~dlkp~Nill--~~~~~~kl~  160 (343)
T cd07880          88 SLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHA--AGIIHRDLKPGNLAV--NEDCELKIL  160 (343)
T ss_pred             cccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--cCCCCEEEe
Confidence                  46999999988888887653   48999999999999999999995  589999999999999  668889999


Q ss_pred             eCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       259 DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |||++...........++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+.......+....+.++..+.
T Consensus       161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07880         161 DFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV  240 (343)
T ss_pred             ecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            99999877665555678899999999876 35889999999999999999999999998888888888887776665554


Q ss_pred             ccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ......  ..+...++..                ....+..+                  .......+.++|.+||+.||
T Consensus       241 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------~~~~~~~~~~li~~~l~~dP  286 (343)
T cd07880         241 QKLQSEDAKNYVKKLPRF----------------RKKDFRSL------------------LPNANPLAVNVLEKMLVLDA  286 (343)
T ss_pred             HhhcchhHHHHHHhcccc----------------CcchHHHh------------------ccCCChHHHHHHHHHcCCCh
Confidence            332211  0111100000                00000000                  00111257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCCC
Q psy11727        416 KKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+|||+.+++.||||+....
T Consensus       287 ~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         287 ESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             hhCCCHHHHhcCccHhhhcC
Confidence            99999999999999987654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.4e-41  Score=331.15  Aligned_cols=281  Identities=30%  Similarity=0.575  Sum_probs=220.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++.....   .......|+.+++.+     .|+||+++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~iv~~~~~~~~~   88 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPA   88 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-----CCCcccceeeeeeec
Confidence            346789999999999999999999999999999999864321   123445566666665     789999999988643


Q ss_pred             ------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 ------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                            ...|+++++++++|.+++...   .+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.+||
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll--~~~~~~kl  161 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAV--NEDCELKI  161 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEE--cCCCCEEE
Confidence                  457899999988998877653   48999999999999999999995  489999999999999  67888999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +|||++...........++..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+....+..+....+.++..+
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (345)
T cd07877         162 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL  241 (345)
T ss_pred             ecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999999877665556778999999999876 5688999999999999999999999999888888888988888888877


Q ss_pred             hccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ........  .++..++.               .|... ..+.                  .......+.+||.+||+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~------------------~~~~~~~~~~li~~~L~~d  287 (345)
T cd07877         242 LKKISSESARNYIQSLTQ---------------MPKMN-FANV------------------FIGANPLAVDLLEKMLVLD  287 (345)
T ss_pred             HhhcccHhHHHHHHHhcc---------------cCCcc-hhhh------------------cCCCCHHHHHHHHHHcCCC
Confidence            65443211  11110000               00000 0000                  0001225789999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||+.+++.||||++.
T Consensus       288 p~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         288 SDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             hhhcCCHHHHhcChhhhhc
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-41  Score=332.72  Aligned_cols=280  Identities=34%  Similarity=0.555  Sum_probs=222.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC---
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN---  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~---  184 (437)
                      +|++.+.||+|+||.||+|++..++..||||.+....   .....+..|+.++..+     .|+||+++.+++...+   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-----RHENIIGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-----CCcchhhhhhhhcccCccc
Confidence            5899999999999999999999999999999987432   2234566677777766     5899999999998775   


Q ss_pred             --EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        185 --HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       185 --~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                        .+|+||||++++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.++|+|||+
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~--gi~H~dlkp~nili--~~~~~~~L~dfg~  149 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA--NVIHRDLKPSNILV--NSNCDLKICDFGL  149 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--cCCCCEEEcccCc
Confidence              899999999988988887653  689999999999999999999964  89999999999999  6678999999999


Q ss_pred             ceecCCc------cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQT------LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +......      .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..+.+..+....+.|+..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  229 (330)
T cd07834         150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE  229 (330)
T ss_pred             eEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence            9776443      2345678899999999888 79999999999999999999999999999999999999998888766


Q ss_pred             hhccCC--ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        336 LLHGAS--KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       336 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .+....  ....+.......                ....+...                  .......+.+||++||++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------~~~~~~~~~~li~~~l~~  275 (330)
T cd07834         230 DLKFITSEKARNYLKSLPKK----------------PKKPLSKL------------------FPGASPEAIDLLEKMLVF  275 (330)
T ss_pred             HhhhccccchhhHHhhcccC----------------CcchhHHh------------------cccCCHHHHHHHHHHccC
Confidence            554211  111111110000                00000000                  000123678999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||.+|||++++++||||++...
T Consensus       276 ~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         276 DPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             ChhhCCCHHHHHhCccHHhhcc
Confidence            9999999999999999987654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0986|consensus

Probab=100.00  E-value=1.1e-42  Score=332.04  Aligned_cols=259  Identities=31%  Similarity=0.425  Sum_probs=209.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.|..-++||+||||.|+-|+.+.||+.+|.|.+.++.    ....-...|..+++++     ..+.||.+-.+|+..+
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-----~s~FiVslaYAfeTkd  258 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-----SSPFIVSLAYAFETKD  258 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-----ccCcEEEEeeeecCCC
Confidence            345888899999999999999999999999999886432    2233345677777776     5679999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||..|.| +|.-+|-+.+..++++..++.++.+|++||.+||.  .+||.|||||+||||  |+.|+|+|+|.|+|
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~--~~iVYRDLKPeNILL--Dd~GhvRISDLGLA  334 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR--RRIVYRDLKPENILL--DDHGHVRISDLGLA  334 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh--cceeeccCChhheee--ccCCCeEeeccceE
Confidence            99999999955 67666666666789999999999999999999995  589999999999999  89999999999999


Q ss_pred             eec--CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        264 CHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       264 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +.+  ++.....+||.+|||||++.+..|+...|+|||||++|||+.|+.||....+-..-+.+-...-.-+..      
T Consensus       335 vei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~e------  408 (591)
T KOG0986|consen  335 VEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEE------  408 (591)
T ss_pred             EecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhh------
Confidence            987  445566799999999999999999999999999999999999999997654432222222111101100      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-  420 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-  420 (437)
                                                                           .+..-.+++++|.+.+|..||.+|.. 
T Consensus       409 -----------------------------------------------------y~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  409 -----------------------------------------------------YSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             -----------------------------------------------------cccccCHHHHHHHHHHHccCHHHhccC
Confidence                                                                 00111125789999999999999985 


Q ss_pred             ----HHHHhcCCCcCcCCC
Q psy11727        421 ----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ----~~e~l~Hp~~~~~~~  435 (437)
                          ++++-+||||+..++
T Consensus       436 rg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  436 RGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             CCcCcchhhhCcccccCCH
Confidence                679999999998764

>KOG0596|consensus

Probab=100.00  E-value=3.4e-42  Score=335.70  Aligned_cols=253  Identities=27%  Similarity=0.402  Sum_probs=198.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecC---CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .|+++++||.||.+.||++.... ...||+|.+..   ......-+..|+.+|.++.    .|.+||+|+++-..++++|
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk----g~~~IIqL~DYEv~d~~lY  436 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLK----GHDKIIQLYDYEVTDGYLY  436 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc----CCceEEEEeeeeccCceEE
Confidence            59999999999999999998644 45677776642   2344566788999999997    5578999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+-..+|..+|..... .++.-.++.+..||+.|+.++|.+  ||||.||||.|+|+.   +|.+||+|||.|..+.
T Consensus       437 mvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~--gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  437 MVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQH--GIVHSDLKPANFLLV---KGRLKLIDFGIANAIQ  510 (677)
T ss_pred             EEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHh--ceeecCCCcccEEEE---eeeEEeeeechhcccC
Confidence            9999988899999987653 244348899999999999999975  899999999999995   6789999999998775


Q ss_pred             Cccc-----cccccccccChhhhcCCC-----------CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        268 QTLY-----QYIQSRYYRSPEVLLGIP-----------YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       268 ~~~~-----~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      ...+     +.+||+.|||||.+....           .+.++||||||||||+|+.|++||..-.  ...+++..... 
T Consensus       511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~-  587 (677)
T KOG0596|consen  511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAITD-  587 (677)
T ss_pred             ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcC-
Confidence            4433     468999999999996432           5578999999999999999999997532  12233222111 


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      |-. -+        -|.                                               ....+..++++++.||
T Consensus       588 P~~-~I--------efp-----------------------------------------------~~~~~~~li~~mK~CL  611 (677)
T KOG0596|consen  588 PNH-EI--------EFP-----------------------------------------------DIPENDELIDVMKCCL  611 (677)
T ss_pred             CCc-cc--------ccc-----------------------------------------------CCCCchHHHHHHHHHH
Confidence            100 00        000                                               0011114799999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+||.+|||+.++|+|||++..
T Consensus       612 ~rdPkkR~si~eLLqhpFl~~~  633 (677)
T KOG0596|consen  612 ARDPKKRWSIPELLQHPFLQIQ  633 (677)
T ss_pred             hcCcccCCCcHHHhcCcccccc
Confidence            9999999999999999999873

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-41  Score=321.11  Aligned_cols=254  Identities=30%  Similarity=0.484  Sum_probs=206.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++....  .....+..|+.+++.+     .|+||+++.+++.+...++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-----RSPYITKYYGSFLKGSKLW   75 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-----CCCCeeeeeEEEEECCeEE
Confidence            47889999999999999999999999999999986432  1223455677776665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+||+++ +|.+++...   .+++..++.++.|++.||.|||++  |++||||+|+||++  ++++.++|+|||++...
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~--~i~h~dl~p~ni~i--~~~~~~~l~d~g~~~~~  148 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE--GKIHRDIKAANILL--SEEGDVKLADFGVSGQL  148 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEE--CCCCCEEEcccccceee
Confidence            99999966 788888764   589999999999999999999964  79999999999999  67888999999999776


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+...  .++..        
T Consensus       149 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~--------  218 (274)
T cd06609         149 TSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPPSL--------  218 (274)
T ss_pred             cccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc--CCCCC--------
Confidence            543   23456788899999999988999999999999999999999999876654443333221  00000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               +                        ..  .....+.++|.+||..||++|||+++
T Consensus       219 -------------------------~------------------------~~--~~~~~~~~~l~~~l~~~p~~Rpt~~~  247 (274)
T cd06609         219 -------------------------E------------------------GN--KFSKPFKDFVSLCLNKDPKERPSAKE  247 (274)
T ss_pred             -------------------------c------------------------cc--ccCHHHHHHHHHHhhCChhhCcCHHH
Confidence                                     0                        00  00125789999999999999999999


Q ss_pred             HhcCCCcCcCCCC
Q psy11727        424 VLRHEFFLKHSVD  436 (437)
Q Consensus       424 ~l~Hp~~~~~~~~  436 (437)
                      +++||||++....
T Consensus       248 il~~~~~~~~~~~  260 (274)
T cd06609         248 LLKHKFIKKAKKT  260 (274)
T ss_pred             HhhChhhcCCCcc
Confidence            9999999886544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-41  Score=317.22  Aligned_cols=255  Identities=29%  Similarity=0.406  Sum_probs=196.7

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      +.||+|+||.||+|.+..+++.||+|++...................+......|+|++++++++...+.+++||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            56899999999999999999999999986432111111111111112222334789999999999999999999999965


Q ss_pred             -cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccccc
Q psy11727        196 -NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI  274 (437)
Q Consensus       196 -~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~  274 (437)
                       +|.+++...  ..+++..+..++.||+.||.|||+.  |++||||+|+||++  +.++.++|+|||++..... .....
T Consensus        82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~--~i~H~dl~p~nil~--~~~~~~~l~dfg~~~~~~~-~~~~~  154 (260)
T cd05611          82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR--GIIHRDIKPENLLI--DQTGHLKLTDFGLSRNGLE-NKKFV  154 (260)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEE--CCCCcEEEeecccceeccc-cccCC
Confidence             788888764  3589999999999999999999964  89999999999999  6678899999999876543 23456


Q ss_pred             ccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCc
Q psy11727        275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNS  354 (437)
Q Consensus       275 gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  354 (437)
                      ++..|+|||.+.+..++.++|+||||+++|+|++|.+||...+.......+.......+...                  
T Consensus       155 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------  216 (260)
T cd05611         155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEV------------------  216 (260)
T ss_pred             CCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcc------------------
Confidence            88899999999988899999999999999999999999988776655554432110000000                  


Q ss_pred             ceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH---HHHhcCCCcC
Q psy11727        355 YVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP---TNVLRHEFFL  431 (437)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~---~e~l~Hp~~~  431 (437)
                                                               .......+.++|.+||+.||++|||+   +|++.||||+
T Consensus       217 -----------------------------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~  255 (260)
T cd05611         217 -----------------------------------------KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK  255 (260)
T ss_pred             -----------------------------------------cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhh
Confidence                                                     00001257899999999999999955   7999999999


Q ss_pred             cCCCC
Q psy11727        432 KHSVD  436 (437)
Q Consensus       432 ~~~~~  436 (437)
                      +..+|
T Consensus       256 ~~~~~  260 (260)
T cd05611         256 SINWD  260 (260)
T ss_pred             cCCCC
Confidence            87665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1e-40  Score=327.47  Aligned_cols=282  Identities=31%  Similarity=0.546  Sum_probs=222.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-  182 (437)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ........|+.++..+     .||||+++.++|.. 
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~   81 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-----RHENIISLSDIFISP   81 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCeeeEeeeEecC
Confidence            35678999999999999999999999999999999885321   2234556677777766     68999999999876 


Q ss_pred             CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        183 KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       183 ~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .+..++||||++++|.+++...   .+++..+..++.||+.||+|||+  .||+||||+|+||++  ++++.++|+|||.
T Consensus        82 ~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~--~~iiH~dl~p~Nili--~~~~~~~l~dfg~  154 (328)
T cd07856          82 LEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHS--AGVVHRDLKPSNILI--NENCDLKICDFGL  154 (328)
T ss_pred             CCcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEeE--CCCCCEEeCcccc
Confidence            5688999999988888887653   47889999999999999999995  489999999999999  6788999999999


Q ss_pred             ceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        263 SCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       263 s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +...........++..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+.......+.+.++.|+..+.....
T Consensus       155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (328)
T cd07856         155 ARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC  234 (328)
T ss_pred             ccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence            9876555555678889999999866 568999999999999999999999999998888888888889988877765432


Q ss_pred             cc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        342 KT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                      ..  ..++.......            ..|    ..+.                  .......+.++|++||+.||.+||
T Consensus       235 ~~~~~~~~~~~~~~~------------~~~----~~~~------------------~~~~~~~~~~li~~~l~~~P~~R~  280 (328)
T cd07856         235 SENTLRFVQSLPKRE------------PVP----FSEK------------------FKNADPSAIDLLEKMLVFDPQKRI  280 (328)
T ss_pred             chhhHHHHhhccccC------------CCc----HHHH------------------cCCCCHHHHHHHHHHcCCChhhCC
Confidence            21  11111110000            000    0000                  000113678999999999999999


Q ss_pred             CHHHHhcCCCcCcCC
Q psy11727        420 SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~  434 (437)
                      |+++++.||||.+..
T Consensus       281 t~~ell~~~~~~~~~  295 (328)
T cd07856         281 SAAEALAHPYLAPYH  295 (328)
T ss_pred             CHHHHhcCCcccccc
Confidence            999999999997643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=6.3e-41  Score=323.12  Aligned_cols=257  Identities=32%  Similarity=0.519  Sum_probs=201.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|++.+.||+|+||.||+|.+..++..||+|.+..... ....+..|+.++..+     .|+||+++++.+..++.++
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   85 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-----NHPYIVKLLGAFYWDGKLW   85 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCcEeeeEEEEEeCCeEE
Confidence            4679999999999999999999999999999999874432 233455566666654     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|..++.... ..+++..+..++.|++.+|.|||+  .|++||||||+||++  +.++.++|+|||++...
T Consensus        86 lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nili--~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          86 IMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS--MKIIHRDLKAGNVLL--TLDGDIKLADFGVSAKN  160 (292)
T ss_pred             EEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc--CCeeecCCCcceEEE--cCCCCEEEccCccceec
Confidence            99999977 5655655433 468999999999999999999995  489999999999999  66888999999998654


Q ss_pred             CCc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ...   .....++..|+|||++.     ...++.++|+|||||++|+|++|.+||...+......++...  .++. ...
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~~-~~~  237 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPT-LSQ  237 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC--CCcc-CCC
Confidence            322   22356788999999985     345788999999999999999999999877654444333211  0000 000


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                               .......+.+||.+||..||++|
T Consensus       238 ---------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~R  260 (292)
T cd06644         238 ---------------------------------------------------------PSKWSMEFRDFLKTALDKHPETR  260 (292)
T ss_pred             ---------------------------------------------------------CcccCHHHHHHHHHHhcCCcccC
Confidence                                                                     00001157899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCC
Q psy11727        419 ISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~  435 (437)
                      ||+.++++||||.....
T Consensus       261 p~~~~il~~~~~~~~~~  277 (292)
T cd06644         261 PSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             cCHHHHhcCcccccccc
Confidence            99999999999987554

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-40  Score=318.00  Aligned_cols=276  Identities=33%  Similarity=0.495  Sum_probs=214.5

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE---
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH---  185 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~---  185 (437)
                      |++.+.||+|+||.||+|.+..++..||+|.++....   .......|+.++..+.  .+.|+|++++++++...+.   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLE--SFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhh--ccCCCCcceEEEEEeeccCCCC
Confidence            6788999999999999999988899999999974322   1223445766666663  3469999999999998776   


Q ss_pred             --EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        186 --LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       186 --~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                        ++++||+++++|.+++.......+++..++.++.|++.||.|||++  |++|+||+|+||++  +.++.++|+|||++
T Consensus        79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~--~i~h~~l~~~nili--~~~~~~~l~dfg~~  154 (287)
T cd07838          79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH--RIVHRDLKPQNILV--TSDGQVKIADFGLA  154 (287)
T ss_pred             ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCChhhEEE--ccCCCEEEeccCcc
Confidence              9999999998999888765444689999999999999999999964  89999999999999  66789999999998


Q ss_pred             eecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        264 CHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       264 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ......  .....++..|+|||++.+..++.++|+|||||++|+|++|.+||.+.+..+.+.++.+..+.+...-+....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         155 RIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             eeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence            766432  223457888999999999999999999999999999999999999999988888888776655432221111


Q ss_pred             cc-chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        342 KT-SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       342 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      .. ...+.                                     .................+.+||.+||+.||.+|||
T Consensus       235 ~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~  277 (287)
T cd07838         235 SLPRSSFP-------------------------------------SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS  277 (287)
T ss_pred             ccchhhcc-------------------------------------cccccchhhhhhhhhHHHHHHHHHHhccCCccCCC
Confidence            00 00000                                     00000000111122346789999999999999999


Q ss_pred             HHHHhcCCCc
Q psy11727        421 PTNVLRHEFF  430 (437)
Q Consensus       421 ~~e~l~Hp~~  430 (437)
                      +++++.||||
T Consensus       278 ~~~il~~~~~  287 (287)
T cd07838         278 AFEALQHPYF  287 (287)
T ss_pred             HHHHhcCcCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.2e-41  Score=323.93  Aligned_cols=259  Identities=25%  Similarity=0.400  Sum_probs=203.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|+||.||+|.+..++..||+|.++...  .....+..|+.++..+     .|+||+++++.+...+.++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-----VSPYIVDFYGAFFIEGAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-----CCCcHHhhhhheecCCeEE
Confidence            46899999999999999999999999999999886432  1224556677777665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        188 LVFELLSY-NLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +||||+++ +|.+++.... ...+++..+..++.||+.||.|||+. .||+|+||||+||++  +.++.++|+|||++..
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~--~~~~~~~l~dfg~~~~  152 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLV--NGNGQVKLCDFGVSGN  152 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEE--CCCCCEEEeecCCccc
Confidence            99999976 7777776531 23589999999999999999999963 489999999999999  5688899999999876


Q ss_pred             cCCc-cccccccccccChhhhcCC------CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        266 VGQT-LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       266 ~~~~-~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      .... .....++..|+|||++.+.      .++.++|+|||||++|+|++|..||...........+......++.... 
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  231 (286)
T cd06622         153 LVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLP-  231 (286)
T ss_pred             ccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCC-
Confidence            5332 2345678899999998654      3578999999999999999999999765544443333222111110000 


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                ......+.+||.+||+.||.+|
T Consensus       232 ----------------------------------------------------------~~~~~~~~~li~~~l~~~p~~R  253 (286)
T cd06622         232 ----------------------------------------------------------SGYSDDAQDFVAKCLNKIPNRR  253 (286)
T ss_pred             ----------------------------------------------------------cccCHHHHHHHHHHcccCcccC
Confidence                                                                      0011257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCC
Q psy11727        419 ISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~  435 (437)
                      ||+++++.||||.....
T Consensus       254 p~~~~l~~~~~~~~~~~  270 (286)
T cd06622         254 PTYAQLLEHPWLVKYKN  270 (286)
T ss_pred             CCHHHHhcChhhhhccC
Confidence            99999999999977643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=7.8e-41  Score=324.63  Aligned_cols=280  Identities=29%  Similarity=0.440  Sum_probs=215.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.....   ......+|+.+++.+     .|+||+++++.+... 
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   80 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-----KHPNVVPLIDMAVERP   80 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-----CCCCccchhhheeccc
Confidence            36899999999999999999999999999999999864321   223456788887766     688999999987543 


Q ss_pred             -------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        184 -------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       184 -------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                             ..+++||||+.+++.+.+.... ..+++..++.++.||+.||+|||+  .||+|+||||+||++  ++++.++
T Consensus        81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~--~~i~H~dl~p~nil~--~~~~~~~  155 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHE--NHILHRDIKAANILI--DNQGILK  155 (311)
T ss_pred             ccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--CCCCCEE
Confidence                   3579999999998888776543 459999999999999999999995  489999999999999  7788999


Q ss_pred             EEeCCCceecCCcc--------------ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy11727        257 IIDFGSSCHVGQTL--------------YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ  321 (437)
Q Consensus       257 L~DFG~s~~~~~~~--------------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~  321 (437)
                      |+|||++.......              ....+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~  235 (311)
T cd07866         156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ  235 (311)
T ss_pred             ECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999986543211              123457789999988654 588999999999999999999999999999888


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+....+.++...++.+......-.....               ......+...                  ......
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~------------------~~~~~~  282 (311)
T cd07866         236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSF---------------TNYPRTLEER------------------FGKLGP  282 (311)
T ss_pred             HHHHHHHhCCCChhhchhhhhcccccccccC---------------CCCCccHHHH------------------cccCCh
Confidence            8888888887776655433221111000000               0000000000                  000113


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      .+.+||.+||..||.+|||+.+++.||||
T Consensus       283 ~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         283 EGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             hHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            57899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=9.1e-41  Score=323.14  Aligned_cols=283  Identities=32%  Similarity=0.479  Sum_probs=217.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ++...++|++.+.||+|+||+||+|.++.+++.||+|.++...   ........|+.++..+     .||||+++++++.
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~i~~~~~~~~   76 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-----NHRNIVNLKEIVT   76 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-----CCCCeeeeeheec
Confidence            3455788999999999999999999999999999999996432   2223445677777665     7899999999987


Q ss_pred             ECC----------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        182 WKN----------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       182 ~~~----------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      +..          ++++|+||+++++.+.+.... ..+++..++.++.||+.||+|||+  .||+|+||||+||++  ++
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili--~~  151 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHK--KNFLHRDIKCSNILL--NN  151 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--CC
Confidence            654          899999999998888877642 468999999999999999999995  489999999999999  67


Q ss_pred             CCCEEEEeCCCceecCCcc----ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQTL----YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      ++.+||+|||++.......    ....++..|+|||++.+. .++.++|||||||++++|++|++||...+..+.+..+.
T Consensus       152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~  231 (302)
T cd07864         152 KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELIS  231 (302)
T ss_pred             CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            8899999999987653322    123457789999988754 57899999999999999999999999988888888888


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      +..+.++...++.......+.+.......               .+......              .    .....+.+|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--------------~----~~~~~~~~l  278 (302)
T cd07864         232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQY---------------RRRLREEF--------------S----FIPTPALDL  278 (302)
T ss_pred             HHhCCCChhhccccccccccccccccccc---------------ccchhhhc--------------C----CCCHHHHHH
Confidence            88877776655433322211110000000               00000000              0    001257999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCc
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      |.+||..||.+|||+.+++.||||
T Consensus       279 i~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         279 LDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HHHHccCChhhCCCHHHHhcCCCC
Confidence            999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0574|consensus

Probab=100.00  E-value=4.8e-44  Score=325.59  Aligned_cols=253  Identities=27%  Similarity=0.446  Sum_probs=209.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +-|.++.+||+|+||.||+|..+.+|..+|||.+.- .....+...|+.++...     .++++|++++.+.....++||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC-----~S~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQC-----KSKYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHc-----CCchhhhhhhhhccCCceEee
Confidence            358899999999999999999999999999999863 44456777888888876     778999999999999999999


Q ss_pred             EEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      ||||+ |+..+.++..+ ++++++.+..+++..+.+|+|||  .+.-||||||..|||+  +.+|+.||+|||.|-.+.+
T Consensus       107 MEYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH--~~~KIHRDIKAGNILL--NT~G~AKLADFGVAGQLTD  181 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLH--DLKKIHRDIKAGNILL--NTDGIAKLADFGVAGQLTD  181 (502)
T ss_pred             hhhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHH--HHHHHHhhcccccEEE--cccchhhhhhccccchhhh
Confidence            99996 57777776654 78999999999999999999999  4568999999999999  7789999999999977654


Q ss_pred             c---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 T---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      .   ..+.+||++|||||++....|+.++||||||++..||..|+|||..-.+...   |.-.-..||+.          
T Consensus       182 TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---IFMIPT~PPPT----------  248 (502)
T KOG0574|consen  182 TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---IFMIPTKPPPT----------  248 (502)
T ss_pred             hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce---eEeccCCCCCC----------
Confidence            3   3467999999999999999999999999999999999999999987655322   21111111111          


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                               .+.-+                   .|.   ..|.|||++||..+|++|-|+-+++
T Consensus       249 -------------------------F~KPE-------------------~WS---~~F~DFi~~CLiK~PE~R~TA~~L~  281 (502)
T KOG0574|consen  249 -------------------------FKKPE-------------------EWS---SEFNDFIRSCLIKKPEERKTALRLC  281 (502)
T ss_pred             -------------------------CCChH-------------------hhh---hHHHHHHHHHhcCCHHHHHHHHHHh
Confidence                                     01111                   111   2689999999999999999999999


Q ss_pred             cCCCcCcC
Q psy11727        426 RHEFFLKH  433 (437)
Q Consensus       426 ~Hp~~~~~  433 (437)
                      +|||++..
T Consensus       282 ~H~FiknA  289 (502)
T KOG0574|consen  282 EHTFIKNA  289 (502)
T ss_pred             hhhhhcCC
Confidence            99999864

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1e-40  Score=319.65  Aligned_cols=257  Identities=25%  Similarity=0.403  Sum_probs=198.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|+++....  ...+...|..+..+    ..+|+||+++++++..++..+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~----~~~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMR----SVDCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHH----HcCCCCeeeeeEEEecCCcEE
Confidence            468999999999999999999999999999999874321  11223334333222    248899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        188 LVFELLSYNLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +||||++++|.+++...  ....+++..++.++.||+.||+|||++ .+++||||||+||++  +.++.+||+|||++..
T Consensus        77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~i~h~dlkp~nil~--~~~~~~kl~dfg~~~~  153 (283)
T cd06617          77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK-LSVIHRDVKPSNVLI--NRNGQVKLCDFGISGY  153 (283)
T ss_pred             EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCeecCCCCHHHEEE--CCCCCEEEeecccccc
Confidence            99999999988887642  224589999999999999999999963 479999999999999  6788899999999876


Q ss_pred             cCCcc--ccccccccccChhhhcC----CCCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhhhc
Q psy11727        266 VGQTL--YQYIQSRYYRSPEVLLG----IPYDLAIDMWSLGCILVELHTGEPLFSGK-NEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       266 ~~~~~--~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      .....  ....++..|+|||++.+    ..++.++|+|||||++|+|++|+.||... ...+.+..+...  .++..   
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~---  228 (283)
T cd06617         154 LVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--PSPQL---  228 (283)
T ss_pred             cccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--CCCCC---
Confidence            54322  22467888999999865    45789999999999999999999999642 222333332211  00000   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                    |.                          ......+.+||.+||..||.+|
T Consensus       229 ------------------------------~~--------------------------~~~~~~l~~li~~~l~~~p~~R  252 (283)
T cd06617         229 ------------------------------PA--------------------------EKFSPEFQDFVNKCLKKNYKER  252 (283)
T ss_pred             ------------------------------Cc--------------------------cccCHHHHHHHHHHccCChhhC
Confidence                                          00                          0001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCC
Q psy11727        419 ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~  434 (437)
                      ||++++++||||.+..
T Consensus       253 p~~~~il~~~~~~~~~  268 (283)
T cd06617         253 PNYPELLQHPFFELHL  268 (283)
T ss_pred             cCHHHHhcCchhhhcc
Confidence            9999999999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.4e-40  Score=318.80  Aligned_cols=258  Identities=28%  Similarity=0.419  Sum_probs=202.5

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      ....++|++.+.||+|+||.||+|.+..+++.+|+|++............|+.++..+.    .|+|++++++++...  
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~----~h~ni~~~~~~~~~~~~   93 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP----NHPNVVKFYGMFYKADK   93 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc----CCCCeEEEEEEEEeccc
Confidence            34578899999999999999999999999999999999754444455667777777663    689999999998754  


Q ss_pred             ---CEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 ---NHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ---~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                         +.+++||||+++ +|.+++...  ....+++..++.++.|++.||+|||+  .|++||||||+||++  +.++.+||
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~nili--~~~~~~kl  169 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN--NRIIHRDVKGNNILL--TTEGGVKL  169 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEE--cCCCCEEE
Confidence               368999999965 788877532  22458999999999999999999995  489999999999999  66778999


Q ss_pred             EeCCCceecCCc---cccccccccccChhhhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        258 IDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       258 ~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      +|||++......   .....|+..|+|||++...     .++.++|+|||||++|+|++|++||...+....+..+... 
T Consensus       170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-  248 (291)
T cd06639         170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN-  248 (291)
T ss_pred             eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC-
Confidence            999998754322   2235678899999998643     3689999999999999999999999877655444433211 


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                       .++. +..                                                         .......+.+||.+
T Consensus       249 -~~~~-~~~---------------------------------------------------------~~~~~~~l~~li~~  269 (291)
T cd06639         249 -PPPT-LLH---------------------------------------------------------PEKWCRSFNHFISQ  269 (291)
T ss_pred             -CCCC-CCc---------------------------------------------------------ccccCHHHHHHHHH
Confidence             0100 000                                                         00001157899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~  431 (437)
                      ||+.||++|||+.++++||||+
T Consensus       270 ~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         270 CLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=9.3e-41  Score=320.39  Aligned_cols=279  Identities=33%  Similarity=0.542  Sum_probs=206.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.....   ....+..|+.++..+     .|+||+++++++...+..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-----RHENLVNLIEVFRRKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-----CCcchhhHHHhcccCCeE
Confidence            479999999999999999999998999999998864322   223455677776665     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+.+++.+.+.... ..+++..+..++.||+.||+|||+  .|++|+||+|+||++  ++++.++|+|||++...
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~--~~i~h~~l~p~ni~~--~~~~~~~l~dfg~~~~~  150 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHS--HNIIHRDIKPENILV--SQSGVVKLCDFGFARTL  150 (286)
T ss_pred             EEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEE--CCCCcEEEEeeeeeeec
Confidence            9999999875544443322 348999999999999999999995  489999999999999  67888999999998765


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+....+....+............
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07846         151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK  230 (286)
T ss_pred             cCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence            322   2235678899999998763 478899999999999999999999998888777777776655433221110000


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      . ..+..                ...|...........               .......+.+||.+||+.||.+|||+.
T Consensus       231 ~-~~~~~----------------~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~~P~~Rp~~~  278 (286)
T cd07846         231 N-PLFAG----------------MRLPEVKEIEPLEKR---------------FPKLSGLVLDLAKQCLRIDPDDRPSSS  278 (286)
T ss_pred             c-hHhhc----------------cccccccCcchHHHh---------------CCCcCHHHHHHHHHHhcCCcccchhHH
Confidence            0 00000                000000000000000               001123689999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      ++++||||
T Consensus       279 ~il~~~~~  286 (286)
T cd07846         279 QLLHHEFF  286 (286)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=8.9e-41  Score=314.95  Aligned_cols=250  Identities=30%  Similarity=0.476  Sum_probs=203.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|++.+.||+|+||.||+|....++..+|+|.+..... ...+..|+.++..+     .|+||+++++.+.+..++|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC-----DSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC-----CCCcEeeeeeeeecCCcEEEE
Confidence            579999999999999999999998899999999975433 56677788887776     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      +|++++ +|.+++.... ..+++..++.++.|++.||.|||+  .|++|+||+|+||++  +.++.++|+|||++.....
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~ni~~--~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS--NKKIHRDIKAGNILL--NEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEE--CCCCcEEEcccccchhccc
Confidence            999976 7888876543 468999999999999999999995  489999999999999  6678899999999876543


Q ss_pred             cc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 TL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      ..   ....++..|+|||++.+..++.++||||||+++|+|++|++||...........+..   .++..          
T Consensus       152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~----------  218 (256)
T cd06612         152 TMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPT----------  218 (256)
T ss_pred             CccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCC----------
Confidence            32   234578899999999999999999999999999999999999987655432222110   00000          


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                       +                                              ..+......+.+||.+||+.||.+|||+.|+|
T Consensus       219 -~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il  251 (256)
T cd06612         219 -L----------------------------------------------SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLL  251 (256)
T ss_pred             -C----------------------------------------------CchhhcCHHHHHHHHHHHhcChhhCcCHHHHh
Confidence             0                                              00000112578999999999999999999999


Q ss_pred             cCCCc
Q psy11727        426 RHEFF  430 (437)
Q Consensus       426 ~Hp~~  430 (437)
                      +||||
T Consensus       252 ~~~~~  256 (256)
T cd06612         252 QHPFI  256 (256)
T ss_pred             cCCCC
Confidence            99997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-40  Score=319.06  Aligned_cols=276  Identities=37%  Similarity=0.617  Sum_probs=217.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      |.+.+.||+|++|.||+|.+..+++.+|+|.+.....   .......|+.+++.+     .|++|+++++++.+.+..++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-----NHPNIIKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-----cCCCcchHHHhhccCCCEEE
Confidence            6678899999999999999999999999999864432   234556677777766     58999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      ||||++++|.+.+.... ..+++..+..++.||+.||.|||++  ||+|+||||+||++  +.++.++|+|||.+.....
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~--~i~H~dl~p~nili--~~~~~~~l~df~~~~~~~~  150 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH--GILHRDLKPENLLI--NTEGVLKLADFGLARSFGS  150 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC--CeeecCcCHHHEEE--CCCCcEEEeeeeeeEecCC
Confidence            99999999988887754 4689999999999999999999964  79999999999999  6778899999999976654


Q ss_pred             cc---ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        269 TL---YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       269 ~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   ....++..|+|||.+.+. .++.++|+||||+++|+|++|++||.+.+..+.+..+.+.++.+....+.......
T Consensus       151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence            32   234577889999999877 78999999999999999999999999999988888888888777665544332211


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                      .+..      +..                           |.................+.+||.+||.+||.+|||+.++
T Consensus       231 ~~~~------~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~l  277 (283)
T cd05118         231 RNYK------FSF---------------------------PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQA  277 (283)
T ss_pred             hhhh------hhh---------------------------ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHH
Confidence            1000      000                           0000000000011123468999999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      +.||||
T Consensus       278 l~~~~~  283 (283)
T cd05118         278 LAHPYF  283 (283)
T ss_pred             hhCCCC
Confidence            999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.8e-40  Score=313.28  Aligned_cols=249  Identities=28%  Similarity=0.430  Sum_probs=204.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||+||++.+..+++.||+|.+....   .....+..|+.+++.+     .|+||+++.+++...++.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-----KHPNIVQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-----CCCCeeeeEeeecCCCeEE
Confidence            5899999999999999999999999999999986321   2223556677776665     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+.+ +|.+.+.......+++..+..++.|++.||.|||+  .|++|+||+|+||++  +.++.++|+|||++...
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~l~~~nil~--~~~~~~~l~d~~~~~~~  151 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFL--TKDGTIKLGDFGIARVL  151 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEE--cCCCCEEEeeccceeec
Confidence            99999965 89888876544568999999999999999999995  489999999999999  66788999999999766


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....   ....|+..|+|||++.+..++.++|+|||||++++|++|..||...+..+....+......+.          
T Consensus       152 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------  221 (256)
T cd08218         152 NSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV----------  221 (256)
T ss_pred             CcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC----------
Confidence            4432   234578889999999998999999999999999999999999987776666555532110000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                          .......+.++|.+||+.+|.+|||+.+
T Consensus       222 ----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (256)
T cd08218         222 ----------------------------------------------------SSHYSYDLRNLVSQLFKRNPRDRPSVNS  249 (256)
T ss_pred             ----------------------------------------------------cccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence                                                                0000115789999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||||
T Consensus       250 vl~~~~~  256 (256)
T cd08218         250 ILEKNFI  256 (256)
T ss_pred             HhhCcCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-40  Score=316.86  Aligned_cols=254  Identities=29%  Similarity=0.439  Sum_probs=202.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.++..+.    .|+||++++++|....    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS----NHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc----CCCChheEEEEEEecCCCCc
Confidence            57899999999999999999999989999999999765554566778888888763    5899999999997644    


Q ss_pred             --EEEEEEEeccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        185 --HLCLVFELLSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       185 --~~~lV~E~~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                        .+++||||+++ +|.+++....  ...+++..++.++.|++.||.|||++  |++|+||+|+||++  +.++.++|+|
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~--~i~H~~l~p~ni~~--~~~~~~~l~d  156 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN--KVIHRDIKGQNILL--TKNAEVKLVD  156 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC--CcccCCCCHHHEEE--ccCCeEEECC
Confidence              59999999976 7888776432  34689999999999999999999964  89999999999999  6678899999


Q ss_pred             CCCceecCCc---cccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        260 FGSSCHVGQT---LYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       260 FG~s~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      ||++......   .....++..|+|||++..     ..++.++|||||||++|+|++|.+||...........+...  .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~  234 (275)
T cd06608         157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN--P  234 (275)
T ss_pred             CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc--C
Confidence            9998665332   234567889999999864     34678999999999999999999999876554444433221  0


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++ .+.                                                         ........+.+||++||
T Consensus       235 ~~-~~~---------------------------------------------------------~~~~~~~~~~~li~~~l  256 (275)
T cd06608         235 PP-TLK---------------------------------------------------------SPENWSKKFNDFISECL  256 (275)
T ss_pred             CC-CCC---------------------------------------------------------chhhcCHHHHHHHHHHh
Confidence            00 000                                                         00001125789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCc
Q psy11727        412 TYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ..||.+|||++++++|||+
T Consensus       257 ~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         257 IKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hcChhhCcCHHHHhcCCCC
Confidence            9999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.8e-40  Score=318.61  Aligned_cols=260  Identities=27%  Similarity=0.434  Sum_probs=202.0

Q ss_pred             ecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceee-
Q psy11727        103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT-  181 (437)
Q Consensus       103 ~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~-  181 (437)
                      .......++|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|..++..+.    .|+||+++++++. 
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~   86 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS----DHPNVVKFYGMYYK   86 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh----cCCCeeeeeeeeee
Confidence            34445678999999999999999999999999999999998654333456677888877764    5899999999874 


Q ss_pred             ----ECCEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        182 ----WKNHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       182 ----~~~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                          ..+.+++||||+++ +|.+++...  ....+++..++.++.|++.||.|||++  +|+||||||+||++  +.++.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~nili--~~~~~  162 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN--KTIHRDVKGNNILL--TTEGG  162 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC--CccccCCCHHhEEE--CCCCC
Confidence                44689999999965 788877532  224588999999999999999999964  89999999999999  66788


Q ss_pred             EEEEeCCCceecCCc---cccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQT---LYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       255 ikL~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      ++|+|||++......   .....|+..|+|||++..     ..++.++|+|||||++|+|++|++||...+....+..+.
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~  242 (286)
T cd06638         163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP  242 (286)
T ss_pred             EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc
Confidence            999999998765332   233568899999999853     457899999999999999999999998765433322211


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .  +.++...                                                       .+.   .....+.+|
T Consensus       243 ~--~~~~~~~-------------------------------------------------------~~~---~~~~~~~~l  262 (286)
T cd06638         243 R--NPPPTLH-------------------------------------------------------QPE---LWSNEFNDF  262 (286)
T ss_pred             c--cCCCccc-------------------------------------------------------CCC---CcCHHHHHH
Confidence            1  0000000                                                       000   001157899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCc
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      |.+||+.||.+|||+.|+++||||
T Consensus       263 i~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         263 IRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHccCCcccCCCHHHHhhcccC
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.2e-40  Score=317.32  Aligned_cols=249  Identities=26%  Similarity=0.368  Sum_probs=194.2

Q ss_pred             ccCeeeecee--cccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLL--GKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~l--G~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|.+.+.+  |+|+||.||++.++.++..+|+|.+.....  ..  .|....+.+.    .|+||+++++.|...+.+
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~--~e~~~~~~~~----~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF--NA--IEPMVHQLMK----DNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc--ch--hhHHHHHHhh----cCCCEEEEEEEEecCCee
Confidence            4567777666  999999999999999999999999864321  11  1333322222    689999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCCCce
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFGSSC  264 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG~s~  264 (437)
                      |+||||+++ +|.+++....  .+++..+..++.||+.||.|||+  .|++||||||+||++.  .++ .++|+|||++.
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~--~~~~~~~l~dfg~~~  158 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHK--HNIIHNDIKLENVLYD--RAKDRIYLCDYGLCK  158 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEe--CCCCeEEEecCccce
Confidence            999999964 8999887653  68999999999999999999995  4899999999999994  455 89999999987


Q ss_pred             ecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhhccCCcc
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ-MTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..... ....++..|+|||++.+..++.++|+|||||++|+|++|..||........ ...+......+. ...      
T Consensus       159 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~------  230 (267)
T PHA03390        159 IIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKL-PFI------  230 (267)
T ss_pred             ecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccC-Ccc------
Confidence            76543 335688999999999998999999999999999999999999986544321 111111100000 000      


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-HH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-PT  422 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-~~  422 (437)
                                                                           ......+.+||.+||+.||.+||+ .+
T Consensus       231 -----------------------------------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~  257 (267)
T PHA03390        231 -----------------------------------------------------KNVSKNANDFVQSMLKYNINYRLTNYN  257 (267)
T ss_pred             -----------------------------------------------------cccCHHHHHHHHHHhccChhhCCchHH
Confidence                                                                 001125799999999999999996 59


Q ss_pred             HHhcCCCcCc
Q psy11727        423 NVLRHEFFLK  432 (437)
Q Consensus       423 e~l~Hp~~~~  432 (437)
                      ++|+||||..
T Consensus       258 ~~l~h~~~~~  267 (267)
T PHA03390        258 EIIKHPFLKI  267 (267)
T ss_pred             HHhcCCcccC
Confidence            9999999963

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-40  Score=317.94  Aligned_cols=277  Identities=36%  Similarity=0.573  Sum_probs=215.6

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NHL  186 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~~  186 (437)
                      |++.+.||.|+||.||+|.+..+++.+|+|.+....   .....+..|+.++..+     .|+|++++++++...  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-----RHPNIVRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCeeeheeeEecCCCCcE
Confidence            678899999999999999999999999999997542   2234466677777776     689999999999988  899


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||+  .|++|+||+|+||++  ++++.++|+|||++...
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~--~~~~h~dl~p~nil~--~~~~~~~l~d~g~~~~~  150 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHS--NGILHRDIKGSNILI--NNDGVLKLADFGLARPY  150 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEE--cCCCCEEEccccceeec
Confidence            9999999999998887653 468999999999999999999995  489999999999999  67889999999999766


Q ss_pred             CCcc----ccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTL----YQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~----~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....    ....++..|+|||.+.+ ..++.++||||||+++|+|++|++||...+....+..+.+..+.|....++...
T Consensus       151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVS  230 (287)
T ss_pred             cCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccc
Confidence            4432    23456788999998765 457899999999999999999999999999888888888877776655443322


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ... ++....              ...+....+.+++..                 .....+.++|++||..||.+|||+
T Consensus       231 ~~~-~~~~~~--------------~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~~l~~~P~~Rp~~  278 (287)
T cd07840         231 KLP-WFENLK--------------PKKPYKRRLREFFKH-----------------LIDPSALDLLDKLLTLDPKKRISA  278 (287)
T ss_pred             cch-hhhhcc--------------ccccchhHHHHHhcc-----------------cCCHHHHHHHHHHcCCChhhCcCH
Confidence            210 000000              000000011111100                 012367999999999999999999


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      .++++||||
T Consensus       279 ~~~l~~~~~  287 (287)
T cd07840         279 DQALQHEYF  287 (287)
T ss_pred             HHHhhCcCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=8.5e-41  Score=317.61  Aligned_cols=252  Identities=25%  Similarity=0.376  Sum_probs=197.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|.++.... .......|+.+++.+     .|+||+++++.+...+.++
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-----~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-----KHSNIVAYFGSYLRRDKLW   82 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEeCCEEE
Confidence            4579999999999999999999999999999999874422 122345566665554     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...  ..+++..++.++.|++.||.|||+  .|++|+||||+||++  +.++.++|+|||++...
T Consensus        83 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili--~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          83 ICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHS--KGKMHRDIKGANILL--TDNGHVKLADFGVSAQI  156 (267)
T ss_pred             EEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--CCCCCEEECcceeeeEc
Confidence            99999976 788887654  358999999999999999999995  489999999999999  67888999999998765


Q ss_pred             CCcc---ccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ....   ....|+..|+|||++.   ...++.++|+|||||++|+|++|.+||...........+......++.. .   
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~---  232 (267)
T cd06645         157 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKL-K---  232 (267)
T ss_pred             cCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcc-c---
Confidence            4322   2357889999999985   4568899999999999999999999997655433322221110000000 0   


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                         +                   .......+.+||.+||..||++|||
T Consensus       233 -----------------------------------~-------------------~~~~~~~~~~li~~~l~~~P~~R~~  258 (267)
T cd06645         233 -----------------------------------D-------------------KMKWSNSFHHFVKMALTKNPKKRPT  258 (267)
T ss_pred             -----------------------------------c-------------------cCCCCHHHHHHHHHHccCCchhCcC
Confidence                                               0                   0000115789999999999999999


Q ss_pred             HHHHhcCCC
Q psy11727        421 PTNVLRHEF  429 (437)
Q Consensus       421 ~~e~l~Hp~  429 (437)
                      ++++++|||
T Consensus       259 ~~~ll~~~~  267 (267)
T cd06645         259 AEKLLQHPF  267 (267)
T ss_pred             HHHHhcCCC
Confidence            999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.8e-40  Score=314.64  Aligned_cols=255  Identities=28%  Similarity=0.431  Sum_probs=201.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||.|+||+||+|....++..+|+|++....  .....+..|+.++..+     .|+||+++++.+...+..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-----NHPNVVKYYTSFVVGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-----CCCCEEEEEEEEeeCCEEE
Confidence            47999999999999999999998899999999986432  2334566677766655     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        188 LVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +|||++++ +|.+++..... ..+++..+..++.|++.||+|||+  .|++|+||+|+||++  ++++.++|+|||++..
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~--~~i~h~~l~p~ni~~--~~~~~~~l~df~~~~~  151 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS--NGQIHRDIKAGNILL--GEDGSVKIADFGVSAS  151 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEE--cCCCCEEEcccchHHH
Confidence            99999965 78888876432 458999999999999999999995  489999999999999  6678899999999865


Q ss_pred             cCCcc-------ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        266 VGQTL-------YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       266 ~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      .....       ....|+..|+|||++... .++.++|+|||||++++|++|+.||...+....+..+...  .++. ..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~-~~  228 (267)
T cd06610         152 LADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN--DPPS-LE  228 (267)
T ss_pred             hccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC--CCCC-cC
Confidence            53321       234678899999999877 7899999999999999999999999876655444433221  0000 00


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      .                                .                    ..  .......+.+||.+||..||++
T Consensus       229 ~--------------------------------~--------------------~~--~~~~~~~~~~li~~~l~~~p~~  254 (267)
T cd06610         229 T--------------------------------G--------------------AD--YKKYSKSFRKMISLCLQKDPSK  254 (267)
T ss_pred             C--------------------------------c--------------------cc--cccccHHHHHHHHHHcCCChhh
Confidence            0                                0                    00  0000125789999999999999


Q ss_pred             CCCHHHHhcCCCc
Q psy11727        418 RISPTNVLRHEFF  430 (437)
Q Consensus       418 R~t~~e~l~Hp~~  430 (437)
                      |||+.++++||||
T Consensus       255 Rp~~~~ll~~p~~  267 (267)
T cd06610         255 RPTAEELLKHKFF  267 (267)
T ss_pred             CcCHHHHhhCCCC
Confidence            9999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0607|consensus

Probab=100.00  E-value=8.3e-42  Score=313.30  Aligned_cols=273  Identities=29%  Similarity=0.431  Sum_probs=210.8

Q ss_pred             eccCeee-eceecccCceEEEEEEEcCCCeEEEEEEecCCccc-chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        108 FLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       108 ~~~~y~i-~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      |.+-|++ .+.||+|+|+.|--|++..+|..||||+|.+.... ..++.+|+.++...+    .|+||++++++|+++..
T Consensus        75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq----gh~nilqLiefFEdd~~  150 (463)
T KOG0607|consen   75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ----GHKNILQLIEFFEDDTR  150 (463)
T ss_pred             HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc----CCccHHHHHHHhcccce
Confidence            3444665 46899999999999999999999999999755332 356778888887765    89999999999999999


Q ss_pred             EEEEEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEEEEeCCCc
Q psy11727        186 LCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSS  263 (437)
Q Consensus       186 ~~lV~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ikL~DFG~s  263 (437)
                      +|||||-| +|.|+..|.+...  +++..+.++++.|+.||.|||.  .||.||||||+|||-...+. .-|||+||.++
T Consensus       151 FYLVfEKm~GGplLshI~~~~~--F~E~EAs~vvkdia~aLdFlH~--kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQKRKH--FNEREASRVVKDIASALDFLHT--KGIAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             EEEEEecccCchHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHhh--cCcccccCCccceeecCCCCcCceeeeccccc
Confidence            99999999 5589998887653  8999999999999999999995  48999999999999854333 34999999876


Q ss_pred             eec----------CCccccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        264 CHV----------GQTLYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       264 ~~~----------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      .-.          .....+.+|+..|||||+..     ...|+.++|.||||||+|-|++|.+||.|....+-       
T Consensus       227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC-------  299 (463)
T KOG0607|consen  227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC-------  299 (463)
T ss_pred             cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC-------
Confidence            432          12234678999999999874     23689999999999999999999999988654221       


Q ss_pred             hCCCChhhhccCCcc----chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        329 LGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                             -|+.+...    .+.|..+.+|.|.+......                                  ......+
T Consensus       300 -------GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa----------------------------------hIS~eak  338 (463)
T KOG0607|consen  300 -------GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA----------------------------------HISSEAK  338 (463)
T ss_pred             -------CccCCCccHHHHHHHHHHHhccCCcCChhhhH----------------------------------HhhHHHH
Confidence                   00000000    13445555555443322111                                  1112568


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCcCcCCCC
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      |||+.+|..||..|.++.++++|||++..+.+
T Consensus       339 dlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  339 DLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             HHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            99999999999999999999999999987654

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.5e-40  Score=318.83  Aligned_cols=253  Identities=31%  Similarity=0.457  Sum_probs=200.6

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      |++.+.||+|+||.||+|.+..++..+|+|.+.... .....+..|+.++..+     .|+||+++++.+...+..++||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~~v~   81 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLWILI   81 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-----CCCCeeeEEEEEeeCCEEEEEE
Confidence            788899999999999999999999999999986433 2233455566666655     7899999999999999999999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||+++ +|..++.... ..+++..+..++.|++.||.|||+  .|++||||||+||++  +.++.++|+|||++......
T Consensus        82 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~--~~i~H~dlkp~nili--~~~~~~kl~dfg~~~~~~~~  156 (282)
T cd06643          82 EFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHE--NKIIHRDLKAGNILF--TLDGDIKLADFGVSAKNTRT  156 (282)
T ss_pred             EecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEE--ccCCCEEEcccccccccccc
Confidence            99976 5656555432 468999999999999999999996  489999999999999  67788999999998654322


Q ss_pred             ---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        270 ---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       270 ---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                         .....++..|+|||++.     +..++.++|+|||||++|+|++|.+||...+..+....+.....  +. +.    
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~-~~----  229 (282)
T cd06643         157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--PT-LA----  229 (282)
T ss_pred             ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC--CC-CC----
Confidence               23356788999999984     45678899999999999999999999988776655555433111  00 00    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                .|                           ......+.+||.+||+.||.+|||+
T Consensus       230 --------------------------~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~  256 (282)
T cd06643         230 --------------------------QP---------------------------SRWSSEFKDFLKKCLEKNVDARWTT  256 (282)
T ss_pred             --------------------------Cc---------------------------cccCHHHHHHHHHHccCChhhCcCH
Confidence                                      00                           0001257899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      .++++||||+...
T Consensus       257 ~~il~~~~~~~~~  269 (282)
T cd06643         257 TQLLQHPFVTVNS  269 (282)
T ss_pred             HHHhcCCCEeccC
Confidence            9999999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.3e-41  Score=330.59  Aligned_cols=203  Identities=28%  Similarity=0.422  Sum_probs=163.7

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|+++....  ....+..|+.++..+.    .||||+++++++.
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~   81 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG----NHLNVVNLLGACT   81 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc----cCcceeeEEeEec
Confidence            36899999999999999999974     24457899999974321  2234667887777764    6899999999887


Q ss_pred             EC-CEEEEEEEeccC-cHHHHHHhcC------------------------------------------------------
Q psy11727        182 WK-NHLCLVFELLSY-NLYNLIRNTN------------------------------------------------------  205 (437)
Q Consensus       182 ~~-~~~~lV~E~~~~-~L~~~l~~~~------------------------------------------------------  205 (437)
                      .. +.+++||||+++ +|.+++....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            64 468999999965 8888886431                                                      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc-----cccc
Q psy11727        206 ------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYI  274 (437)
Q Consensus       206 ------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~  274 (437)
                            ...+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.......     ....
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDiKp~Nil~--~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~  237 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLAS--RKCIHRDLAARNILL--SENNVVKICDFGLARDIYKDPDYVRKGSAR  237 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHH--CCEECCCCccceEEE--cCCCcEEEeecccccccccCcchhcccCCC
Confidence                  1247888899999999999999996  489999999999999  668889999999997643211     1233


Q ss_pred             ccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy11727        275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV  319 (437)
Q Consensus       275 gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~  319 (437)
                      ++..|+|||++.+..++.++|||||||++|||++ |.+||.+....
T Consensus       238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~  283 (338)
T cd05102         238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN  283 (338)
T ss_pred             CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc
Confidence            4578999999999999999999999999999997 99999876543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.8e-40  Score=319.59  Aligned_cols=253  Identities=26%  Similarity=0.395  Sum_probs=202.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+|.+.+.||+|+||.||+|++..++..||+|.+..... ....+..|+.++..+     .|+||+++++.|...++.|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~   93 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   93 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEE
Confidence            4689999999999999999999999999999999874332 234455677766654     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...   .+++..+..++.|++.||+|||+  .||+||||||+|||+  +.++.++|+|||++...
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~--~gi~H~dLkp~Nill--~~~~~~kl~dfg~~~~~  166 (296)
T cd06654          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             EeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEE--cCCCCEEECccccchhc
Confidence            99999965 788887653   37899999999999999999995  489999999999999  67788999999998654


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||.+.+..++.++|+|||||++|+|++|++||...+.......+.. .+.++.         
T Consensus       167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~---------  236 (296)
T cd06654         167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPEL---------  236 (296)
T ss_pred             cccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCCC---------
Confidence            322   2234678899999999988899999999999999999999999987765433222211 011000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               +                         ........+.+||.+||..||.+|||+.+
T Consensus       237 -------------------------~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~e  266 (296)
T cd06654         237 -------------------------Q-------------------------NPEKLSAIFRDFLNRCLDMDVEKRGSAKE  266 (296)
T ss_pred             -------------------------C-------------------------CccccCHHHHHHHHHHCcCCcccCcCHHH
Confidence                                     0                         00001125789999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +++||||...
T Consensus       267 il~~~~~~~~  276 (296)
T cd06654         267 LLQHQFLKIA  276 (296)
T ss_pred             HhhChhhhcc
Confidence            9999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=9.3e-41  Score=317.33  Aligned_cols=252  Identities=25%  Similarity=0.358  Sum_probs=196.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++.... ........|+.++..+     .|+||+++++.+...+.++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-----KHCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-----CCCCeeeeeEEEEeCCEEE
Confidence            457999999999999999999999999999999987432 2223455677766655     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...  ..+++..+..++.|++.||.|||+  .||+||||||+||++  +.++.++|+|||++...
T Consensus        83 iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nill--~~~~~~~l~dfg~~~~~  156 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHS--KGKMHRDIKGANILL--TDNGDVKLADFGVAAKI  156 (267)
T ss_pred             EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEE--CCCCCEEECcCccceee
Confidence            99999975 788887654  358999999999999999999995  489999999999999  67888999999999765


Q ss_pred             CCcc---ccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ....   ....++..|+|||.+.   ...++.++|+|||||++|||++|.+||......+....+......++.      
T Consensus       157 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------  230 (267)
T cd06646         157 TATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK------  230 (267)
T ss_pred             cccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC------
Confidence            4322   2356788999999985   345788999999999999999999999755433222111110000000      


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                    ...                      .......+.+||++||+.||++|||
T Consensus       231 ------------------------------~~~----------------------~~~~~~~~~~li~~~l~~~P~~Rp~  258 (267)
T cd06646         231 ------------------------------LKD----------------------KTKWSSTFHNFVKISLTKNPKKRPT  258 (267)
T ss_pred             ------------------------------Ccc----------------------ccccCHHHHHHHHHHhhCChhhCcC
Confidence                                          000                      0001125789999999999999999


Q ss_pred             HHHHhcCCC
Q psy11727        421 PTNVLRHEF  429 (437)
Q Consensus       421 ~~e~l~Hp~  429 (437)
                      ++++++|+|
T Consensus       259 ~~~il~~l~  267 (267)
T cd06646         259 AERLLTHLF  267 (267)
T ss_pred             HHHHhcCCC
Confidence            999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=3e-40  Score=311.70  Aligned_cols=249  Identities=27%  Similarity=0.406  Sum_probs=206.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||.+.+..++..+++|.+....   .....+..|+.+++.+     .|+||+++++++.+.+.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-----QHPNIIAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-----CCCCeeEEEeEEecCCeEE
Confidence            5899999999999999999999999999999886432   2234566788777766     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..+..++.|++.+|+|||+  .|++|+||+|+||++  +.++.+||+|||++...
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~ni~~--~~~~~~kl~d~~~~~~~  151 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK--AGILHRDIKTLNIFL--TKAGLIKLGDFGISKIL  151 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChHhEEE--eCCCCEEECcCcceEEc
Confidence            99999965 89998877544568999999999999999999995  489999999999999  66788999999998765


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....   ....++..|+|||++.+..++.++|+||||+++++|++|..||...+..+....+......+..         
T Consensus       152 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------  222 (256)
T cd08221         152 GSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---------  222 (256)
T ss_pred             ccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---------
Confidence            4332   3456889999999999888999999999999999999999999987776666655321100000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                           ......+.++|.+||..||.+|||+.+
T Consensus       223 -----------------------------------------------------~~~~~~~~~~i~~~l~~~p~~R~s~~~  249 (256)
T cd08221         223 -----------------------------------------------------SVYSSELISLVHSLLQQDPEKRPTADE  249 (256)
T ss_pred             -----------------------------------------------------cccCHHHHHHHHHHcccCcccCCCHHH
Confidence                                                                 000125789999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||||
T Consensus       250 ll~~~~l  256 (256)
T cd08221         250 VLDQPLL  256 (256)
T ss_pred             HhhCcCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2.1e-40  Score=325.63  Aligned_cols=280  Identities=34%  Similarity=0.562  Sum_probs=216.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCC--CeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEE--KCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      +|.+.+.||+|+||.||++.+..+  +..||+|.+....   ........|+.++..+.    .|+||+++++.+...  
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~   76 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR----GHKNITCLYDMDIVFPG   76 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc----CCCChheeeeeeeeccc
Confidence            588999999999999999999888  8899999986421   12345566877777763    589999999875432  


Q ss_pred             --CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 --NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 --~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                        ..+++++|+++++|.+++...  ..+++..++.++.||+.||.|||+  .||+||||||+|||+  +.++.++|+|||
T Consensus        77 ~~~~~~~~~e~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~givH~dlkp~Nili--~~~~~~kl~Dfg  150 (332)
T cd07857          77 NFNELYLYEELMEADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHS--ANVLHRDLKPGNLLV--NADCELKICDFG  150 (332)
T ss_pred             cCCcEEEEEecccCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHeEE--cCCCCEEeCcCC
Confidence              568999999999999988654  358999999999999999999995  489999999999999  678889999999


Q ss_pred             CceecCCc-------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        262 SSCHVGQT-------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       262 ~s~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      ++......       .....|+..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+....+..++..++.|+
T Consensus       151 ~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  230 (332)
T cd07857         151 LARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD  230 (332)
T ss_pred             CceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC
Confidence            99765321       123468899999998866 4689999999999999999999999999999999999999999888


Q ss_pred             hhhhccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        334 GYLLHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       334 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ..++.......  .+......               .+ ...+..+                  .......+.+||.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~~------------------~~~~~~~~~~li~~~l  276 (332)
T cd07857         231 EETLSRIGSPKAQNYIRSLPN---------------IP-KKPFESI------------------FPNANPLALDLLEKLL  276 (332)
T ss_pred             HHHHHhhhhhhHHHHHHhccc---------------cC-CcchHhh------------------CCCCCHHHHHHHHHHc
Confidence            76654332111  00000000               00 0000000                  0011236789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ++||.+|||+.+++.||||+++.
T Consensus       277 ~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         277 AFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             cCCcccCCCHHHHhcChhhhhhc
Confidence            99999999999999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2e-40  Score=314.93  Aligned_cols=247  Identities=28%  Similarity=0.440  Sum_probs=198.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----------chHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----------LNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +|.+.+.||+|+||.||+|.+..++..||+|.+......          ...+..|+.++..+     .|+||+++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-----QHENIVQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEE
Confidence            477889999999999999999989999999988643221          12345566666665     789999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      ...++.++||||+++ +|.+++...  ..+++..+..++.|++.||+|||+  .|++||||+|+||++  ++++.++|+|
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~--~~ivH~di~p~nil~--~~~~~~~l~d  149 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHN--RGIIHRDIKGANILV--DNKGGIKISD  149 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHh--cCcccccCCHHHEEE--cCCCCEEecc
Confidence            999999999999966 788888764  358999999999999999999995  489999999999999  6788899999


Q ss_pred             CCCceecCCc---------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q psy11727        260 FGSSCHVGQT---------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG  330 (437)
Q Consensus       260 FG~s~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  330 (437)
                      ||++......         .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+.... 
T Consensus       150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-  228 (267)
T cd06628         150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA-  228 (267)
T ss_pred             cCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC-
Confidence            9998655421         112457888999999998889999999999999999999999998766544333322210 


Q ss_pred             CCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       331 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                       .+.                                 .                           .......+.+||++|
T Consensus       229 -~~~---------------------------------~---------------------------~~~~~~~~~~li~~~  247 (267)
T cd06628         229 -SPE---------------------------------I---------------------------PSNISSEAIDFLEKT  247 (267)
T ss_pred             -CCc---------------------------------C---------------------------CcccCHHHHHHHHHH
Confidence             000                                 0                           000112578999999


Q ss_pred             cccCCCCCCCHHHHhcCCCc
Q psy11727        411 LTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~  430 (437)
                      |+.||.+|||+.++++||||
T Consensus       248 l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         248 FEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccCCchhCcCHHHHhhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.3e-40  Score=321.98  Aligned_cols=254  Identities=26%  Similarity=0.388  Sum_probs=201.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ....+..|+.++..+     .|+||++++++|...++.+
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   92 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   92 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCEEE
Confidence            4789999999999999999999999999999999864322 223344566665554     8899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...   .+++..+..++.|++.||.|||+  .|++||||||+|||+  +.++.++|+|||++...
T Consensus        93 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~--~~i~H~dL~p~Nili--~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHS--NQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             EeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEE--CCCCCEEECcCccceEc
Confidence            99999965 788887653   37899999999999999999995  489999999999999  67888999999998765


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||.+.+.......+.. .+.|+.         
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~---------  235 (297)
T cd06656         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPEL---------  235 (297)
T ss_pred             cCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCC---------
Confidence            332   1234678899999999998899999999999999999999999987654322211110 000000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                        .........+.+||.+||..||.+|||+.+
T Consensus       236 --------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  265 (297)
T cd06656         236 --------------------------------------------------QNPERLSAVFRDFLNRCLEMDVDRRGSAKE  265 (297)
T ss_pred             --------------------------------------------------CCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence                                                              000001124689999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +++||||+...
T Consensus       266 il~~~~~~~~~  276 (297)
T cd06656         266 LLQHPFLKLAK  276 (297)
T ss_pred             HhcCchhcccc
Confidence            99999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4236|consensus

Probab=100.00  E-value=2.9e-42  Score=333.70  Aligned_cols=256  Identities=29%  Similarity=0.432  Sum_probs=214.8

Q ss_pred             ccCeee--eceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i--~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..-|+|  .++||.|.||+||-|+.+++|+.||||+|.+.+   ....+...|+.|++.+     +||.||.+...|+..
T Consensus       561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~  635 (888)
T KOG4236|consen  561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-----HHPGIVNLECMFETP  635 (888)
T ss_pred             HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-----CCCCeeEEEEeecCC
Confidence            334666  589999999999999999999999999997432   2236677899999887     889999999999999


Q ss_pred             CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG~  262 (437)
                      +..++|||-+.|++++.|.....+.+++...+.++.||+.||.|||.+  +|+||||||+|||+.+.+ -..+||||||+
T Consensus       636 ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k--nIvHCDLKPENVLLas~~~FPQvKlCDFGf  713 (888)
T KOG4236|consen  636 ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK--NIVHCDLKPENVLLASASPFPQVKLCDFGF  713 (888)
T ss_pred             ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc--ceeeccCCchheeeccCCCCCceeeccccc
Confidence            999999999999999999887778899999999999999999999964  799999999999996543 35799999999


Q ss_pred             ceecCCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChhhhcc
Q psy11727        263 SCHVGQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG-MPPGYLLHG  339 (437)
Q Consensus       263 s~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~  339 (437)
                      |+.+++..  .+.+||+.|+|||++..+.|....||||.|||+|.-++|..||..+.+  +-.+|....- .||.     
T Consensus       714 ARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~-----  786 (888)
T KOG4236|consen  714 ARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPN-----  786 (888)
T ss_pred             eeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCC-----
Confidence            99998765  357899999999999999999999999999999999999999975432  3333332211 1221     


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                             .|.+.....+|||..+|+..-++|.
T Consensus       787 -------------------------------------------------------PW~eis~~AidlIn~LLqVkm~kRy  811 (888)
T KOG4236|consen  787 -------------------------------------------------------PWSEISPEAIDLINNLLQVKMRKRY  811 (888)
T ss_pred             -------------------------------------------------------chhhcCHHHHHHHHHHHHHHHHHhc
Confidence                                                                   1122222568999999999999999


Q ss_pred             CHHHHhcCCCcCcC
Q psy11727        420 SPTNVLRHEFFLKH  433 (437)
Q Consensus       420 t~~e~l~Hp~~~~~  433 (437)
                      |.+..|.|||+++.
T Consensus       812 svdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  812 SVDKSLSHPWLQDY  825 (888)
T ss_pred             chHhhccchhhhcc
Confidence            99999999999873

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=318.42  Aligned_cols=275  Identities=36%  Similarity=0.565  Sum_probs=214.3

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccch--HHHHHHHHHHHhhhcCCC-CCcEEEecceeeECCEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN--QAQIEVQLLEKINKADIH-SRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~~e~~~~~~l~~~~~~-h~~iv~l~~~~~~~~~~~l  188 (437)
                      |++.+.||+|+||+||+|.+..+++.||||.+........  ....|+..+..+     . |+||+++++.+.+++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~h~~i~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL-----NEHPNIVKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhc-----cCCCCchhHHHHhhcCCcEEE
Confidence            6788999999999999999999999999999864432222  223355555444     5 8999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      ||||++++|.+.+.......+++..+..++.|++.+|.|||++  |++|+||+|+||++  +.++.++|+|||.+.....
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~--~i~H~dl~~~ni~i--~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH--GFFHRDLKPENLLV--SGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChhhEEE--cCCCCEEEeecccceeccC
Confidence            9999988999988776545689999999999999999999964  89999999999999  6788999999999976643


Q ss_pred             c--cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 T--LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      .  .....++..|+|||++.+ ..++.++|+||||+++++|++|++||.+.+..+.+..+...++.|+...+........
T Consensus       152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07830         152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS  231 (283)
T ss_pred             CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence            2  234567889999998854 4578999999999999999999999999999899999888888877654433221110


Q ss_pred             hhcccCCCcceeccccccccccCCCC--CchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGS--KRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                      .+.      +           ..+..  ..+.+.                  .......+.+||++||..||.+|||++|
T Consensus       232 ~~~------~-----------~~~~~~~~~~~~~------------------~~~~~~~~~~li~~cl~~~p~~Rpt~~e  276 (283)
T cd07830         232 KLG------F-----------RFPQFAPTSLHQL------------------IPNASPEAIDLIKDMLRWDPKKRPTASQ  276 (283)
T ss_pred             ccc------c-----------cccccccccHHHH------------------cccCCHHHHHHHHHhcccCcccCCCHHH
Confidence            000      0           00000  000000                  0011236899999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      ++.||||
T Consensus       277 i~~~~~~  283 (283)
T cd07830         277 ALQHPYF  283 (283)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=2.2e-40  Score=326.90  Aligned_cols=281  Identities=29%  Similarity=0.446  Sum_probs=207.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK----  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~----  183 (437)
                      ..+|.+.+.||.|+||.||+|.+..++..||+|.+..... .......|+.+++.+     .|+||+++++.+...    
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVYEVLGPSGSDL   78 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-----CCCcchhhHhhhccccccc
Confidence            5789999999999999999999999999999999865432 234566677777766     688999999876654    


Q ss_pred             ----------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        184 ----------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       184 ----------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                                ...|+||||++++|.+++...   .+++..++.++.||+.||.|||+  .||+||||||+||+++. .++
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~--~givH~dikp~Nili~~-~~~  152 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANVFINT-EDL  152 (342)
T ss_pred             ccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEcC-CCc
Confidence                      468999999998888877643   48999999999999999999995  48999999999999942 455


Q ss_pred             CEEEEeCCCceecCCc------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        254 AIKIIDFGSSCHVGQT------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      .++|+|||++......      .....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+..+....+.
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~  232 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL  232 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            7899999998765321      112356888999998754 568899999999999999999999999988877777766


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .....+.......      +....+..         ......+....+..++                  ......+.+|
T Consensus       233 ~~~~~~~~~~~~~------~~~~~~~~---------~~~~~~~~~~~~~~~~------------------~~~~~~~~~l  279 (342)
T cd07854         233 ESVPVVREEDRNE------LLNVIPSF---------VRNDGGEPRRPLRDLL------------------PGVNPEALDF  279 (342)
T ss_pred             HhcCCCChHHhhh------hhhhhhhh---------hhhcccccCCCHHHHc------------------cCCCHHHHHH
Confidence            6543333221110      11100000         0000000000011110                  0111257899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      |++||+.||.+|||+.+++.||||+..
T Consensus       280 i~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         280 LEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HHHHhCCCchhccCHHHHhCCCccccc
Confidence            999999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.5e-40  Score=318.17  Aligned_cols=253  Identities=26%  Similarity=0.413  Sum_probs=203.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .+|++.+.||.|+||.||+|.+..+++.||+|.+..... ....+..|+.++..+     .|+||+++++++...+.+++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-----KNPNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-----CCCceeeeeeeEecCceEEE
Confidence            579999999999999999999999999999999864322 233455566666654     78999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |+||+.+ +|.+++...   .+++..+..++.|++.||+|||++  |++||||||+||++  +.++.++|+|||++....
T Consensus        94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~--~i~H~dL~p~Nili--~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655          94 VMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHAN--QVIHRDIKSDNVLL--GMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             EEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCCEEEccCccchhcc
Confidence            9999966 777777543   489999999999999999999964  89999999999999  668889999999986543


Q ss_pred             Cc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||.+.+.......+... +.++..         
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~~---------  236 (296)
T cd06655         167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPELQ---------  236 (296)
T ss_pred             cccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcccC---------
Confidence            22   12346788999999999888999999999999999999999999988765554433221 100000         


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                        .+......+.+||++||..||.+|||+.++
T Consensus       237 --------------------------------------------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~i  266 (296)
T cd06655         237 --------------------------------------------------NPEKLSPIFRDFLNRCLEMDVEKRGSAKEL  266 (296)
T ss_pred             --------------------------------------------------CcccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence                                                              000001157899999999999999999999


Q ss_pred             hcCCCcCcCC
Q psy11727        425 LRHEFFLKHS  434 (437)
Q Consensus       425 l~Hp~~~~~~  434 (437)
                      ++||||....
T Consensus       267 l~~~~~~~~~  276 (296)
T cd06655         267 LQHPFLKLAK  276 (296)
T ss_pred             hhChHhhhcc
Confidence            9999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-40  Score=318.56  Aligned_cols=256  Identities=32%  Similarity=0.475  Sum_probs=203.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++.+.||.|+||+||+|.+..++..||+|.+..... ....+..|+.++..+     .|+||+++++.+..++.++
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-----KHPNIVGLYEAYFYENKLW   78 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEEecCCeEE
Confidence            3579999999999999999999988999999999874422 233455677777665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.... ..+++..++.++.|++.||.|||+  .||+|+||||+||++  +.++.++|+|||++...
T Consensus        79 lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~nili--~~~~~~~l~d~g~~~~~  153 (280)
T cd06611          79 ILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHS--HKVIHRDLKAGNILL--TLDGDVKLADFGVSAKN  153 (280)
T ss_pred             EEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEE--CCCCCEEEccCccchhh
Confidence            99999976 7777776543 468999999999999999999995  489999999999999  67888999999998654


Q ss_pred             CCc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ...   .....++..|+|||++.     +..++.++|+|||||++|+|++|.+||.+.+....+..+..  +.++..-. 
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~-  230 (280)
T cd06611         154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--SEPPTLDQ-  230 (280)
T ss_pred             cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--CCCCCcCC-
Confidence            322   23356888999999985     34577899999999999999999999988766554443321  11100000 


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                    |                           ..-...+.+||.+||..||.+|
T Consensus       231 ------------------------------~---------------------------~~~~~~~~~li~~~l~~~p~~R  253 (280)
T cd06611         231 ------------------------------P---------------------------SKWSSSFNDFLKSCLVKDPDDR  253 (280)
T ss_pred             ------------------------------c---------------------------ccCCHHHHHHHHHHhccChhhC
Confidence                                          0                           0000157899999999999999


Q ss_pred             CCHHHHhcCCCcCcCC
Q psy11727        419 ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~  434 (437)
                      ||+.++++||||.+..
T Consensus       254 ps~~~il~~~~~~~~~  269 (280)
T cd06611         254 PTAAELLKHPFVSDQS  269 (280)
T ss_pred             cCHHHHhcChhhcccc
Confidence            9999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.7e-40  Score=312.91  Aligned_cols=248  Identities=25%  Similarity=0.419  Sum_probs=196.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-------chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      +|.+.+.||+|+||+||+|.+ .+++.+|+|.+......       ...+..|+.+++.+     .|+||+++.+++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-----KHVNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-----CCCCEeeEeeEeecC
Confidence            478899999999999999986 47889999998643211       13345566666655     688999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++||||+++ +|.+++...  ..+++..+..++.|++.||+|||+  .||+|+||+|+||++  ++++.++|+|||+
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~--~~~~~~~l~dfg~  148 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHN--NCVVHRDIKGNNVML--MPNGIIKLIDFGC  148 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHhEEE--CCCCeEEeccchh
Confidence            999999999965 888888764  358999999999999999999995  489999999999999  6788899999999


Q ss_pred             ceecCC---------ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        263 SCHVGQ---------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       263 s~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      +.....         ......++..|+|||++.+..++.++|+|||||++|+|++|.+||...+.......+....+..+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  228 (265)
T cd06631         149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP  228 (265)
T ss_pred             hHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC
Confidence            865421         12234678899999999998999999999999999999999999987665444333322111111


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ..                                                            .......+.+||++||..
T Consensus       229 ~~------------------------------------------------------------~~~~~~~~~~~i~~~l~~  248 (265)
T cd06631         229 RL------------------------------------------------------------PDSFSAAAIDFVTSCLTR  248 (265)
T ss_pred             CC------------------------------------------------------------CCCCCHHHHHHHHHHhcC
Confidence            00                                                            000112578999999999


Q ss_pred             CCCCCCCHHHHhcCCCc
Q psy11727        414 DPKKRISPTNVLRHEFF  430 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~  430 (437)
                      ||.+|||+.++++||||
T Consensus       249 ~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         249 DQHERPSALQLLRHDFL  265 (265)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.7e-40  Score=319.20  Aligned_cols=262  Identities=26%  Similarity=0.362  Sum_probs=199.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|+..+.||+|+||.||++.+..+++.||+|.+....  .....+..|+.++.++.    .|+||+++++++...+..+
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~iv~~~~~~~~~~~~~   79 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS----DCPYIVKFYGALFREGDCW   79 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc----CCCCEeeeeeEEecCCcEE
Confidence            35677889999999999999999999999999986432  12234555666665552    4899999999999999999


Q ss_pred             EEEEeccCcHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        188 LVFELLSYNLYNLIR---NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       188 lV~E~~~~~L~~~l~---~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ++||++++++.++..   ......+++..+..++.|++.||+|||+. .|++||||||+||++  +.++.++|+|||++.
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~--~~~~~~kl~dfg~~~  156 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILL--DRNGNIKLCDFGISG  156 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEE--ccCCcEEEeecchhH
Confidence            999999876655432   22235689999999999999999999963 489999999999999  667889999999986


Q ss_pred             ecCCc--cccccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChhhhc
Q psy11727        265 HVGQT--LYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG-MPPGYLLH  338 (437)
Q Consensus       265 ~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~  338 (437)
                      .....  .....|+..|+|||++.+.   .++.++|+|||||++|+|++|++||...+.  ....+.+... .++. ...
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~-~~~  233 (288)
T cd06616         157 QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPI-LSN  233 (288)
T ss_pred             HhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCc-CCC
Confidence            55332  2334678899999999876   689999999999999999999999976542  2222222111 1110 000


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                             ..+......+.+||.+||+.||.+|
T Consensus       234 -------------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~~R  258 (288)
T cd06616         234 -------------------------------------------------------SEEREFSPSFVNFINLCLIKDESKR  258 (288)
T ss_pred             -------------------------------------------------------cCCCccCHHHHHHHHHHccCChhhC
Confidence                                                                   0000011257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCCC
Q psy11727        419 ISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~~  436 (437)
                      ||+++++.||||++....
T Consensus       259 pt~~~i~~~~~~~~~~~~  276 (288)
T cd06616         259 PKYKELLEHPFIKDYEER  276 (288)
T ss_pred             cCHHHHhcChhhhchhhc
Confidence            999999999999875543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.5e-40  Score=310.13  Aligned_cols=250  Identities=30%  Similarity=0.394  Sum_probs=203.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||+|.+..++..+|+|.+....   .....+..|+.+++.+     .|+||+++++.+...+.++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-----SHPNIIEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-----CCCchhheeeeEecCCEEE
Confidence            5899999999999999999999999999999986432   1233556677777766     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..+..++.|++.+|+|||++  |++|+||+|+||+++ ++++.++|+|||.+...
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~i~h~dl~~~nil~~-~~~~~~~l~d~~~~~~~  152 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK--LILHRDLKTQNILLD-KHKMVVKIGDFGISKIL  152 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEEc-CCCCEEEEccCCCceec
Confidence            99999965 899998775545689999999999999999999964  899999999999994 23456899999999876


Q ss_pred             CCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        267 GQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       267 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ....  ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+.+.......+......+.           
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  221 (256)
T cd08220         153 SSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPI-----------  221 (256)
T ss_pred             CCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCC-----------
Confidence            5432  235678899999999988899999999999999999999999988776555444432110000           


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                            ++                                             .....+.++|.+||..||.+|||+.|+
T Consensus       222 ------~~---------------------------------------------~~~~~l~~li~~~l~~~p~~Rpt~~~l  250 (256)
T cd08220         222 ------SD---------------------------------------------RYSPDLRQLILSMLNLDPSKRPQLSQI  250 (256)
T ss_pred             ------CC---------------------------------------------CcCHHHHHHHHHHccCChhhCCCHHHH
Confidence                  00                                             001157899999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      ++||||
T Consensus       251 l~~p~~  256 (256)
T cd08220         251 MAQPIC  256 (256)
T ss_pred             hhCCCC
Confidence            999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-40  Score=315.69  Aligned_cols=275  Identities=36%  Similarity=0.584  Sum_probs=219.8

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      |++.+.||+|+||.||+|....+++.||+|++...   .........|+.+++.+     .|+|++++++++.+.+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-----KHPNIVKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-----CCCCHHHHHhhhhcCCceEE
Confidence            66788999999999999999999999999999754   22334556677777766     58999999999999999999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++++|.+++.... ..+++..+..++.|++.||+|||++  ||+||||+|+||++  ++++.++|+|||++.....
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~--~i~H~~l~~~ni~~--~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH--RILHRDLKPQNILI--NRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChheEEE--cCCCCEEEecCCcccccCC
Confidence            99999999999988753 3589999999999999999999964  89999999999999  6688999999999876543


Q ss_pred             cc---ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        269 TL---YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       269 ~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   ....++..|+|||++.+. .++.++|+|||||+++||++|.+||.+.+..+.+.++...++.+....+.......
T Consensus       151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence            32   233456789999999876 78999999999999999999999999999999999999988888877765544332


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                       +++..... +             + .....+.                  .......+.++|.+||+.||.+|||+.++
T Consensus       231 -~~~~~~~~-~-------------~-~~~~~~~------------------~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~  276 (282)
T cd07829         231 -DYKPTFPK-F-------------P-PKDLEKV------------------LPRLDPEGIDLLSKMLQYNPAKRISAKEA  276 (282)
T ss_pred             -cccccccc-c-------------C-ccchHHh------------------cccccHHHHHHHHHhhccCcccCCCHHHH
Confidence             11110000 0             0 0000000                  00112368999999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      +.||||
T Consensus       277 l~~p~~  282 (282)
T cd07829         277 LKHPYF  282 (282)
T ss_pred             hhCcCC
Confidence            999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1187|consensus

Probab=100.00  E-value=1.4e-40  Score=327.64  Aligned_cols=212  Identities=25%  Similarity=0.290  Sum_probs=181.1

Q ss_pred             CCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-chHHHHHHHHHHHhhhcCCCCCcEEE
Q psy11727         97 NYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLLEKINKADIHSRYIVK  175 (437)
Q Consensus        97 ~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~e~~~~~~l~~~~~~h~~iv~  175 (437)
                      ...|.+.+....+++|.-.+.||+|+||.||+|.... +..||||.+...... ..++..|+.++..+     +|||+|+
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-----~H~Nlv~  135 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRL-----RHPNLVK  135 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcC-----CCcCccc
Confidence            3445666667778899999999999999999998654 489999988755443 56689999999887     7899999


Q ss_pred             ecceeeECC-EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC-CCCeeeCCCCCCcEEEecCCC
Q psy11727        176 LKGHFTWKN-HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP-ELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       176 l~~~~~~~~-~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~-~~giiHrDiKp~NIll~~~~~  252 (437)
                      |+|+|.+.+ +.+||+|||+ |+|.+++.......++|..+.+|+.++|+||+|||.. ...||||||||.||||  |++
T Consensus       136 LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL--D~~  213 (361)
T KOG1187|consen  136 LLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL--DED  213 (361)
T ss_pred             EEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE--CCC
Confidence            999999988 5999999996 5899988775432789999999999999999999985 2259999999999999  889


Q ss_pred             CCEEEEeCCCceecCC-ccc--cc-cccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        253 SAIKIIDFGSSCHVGQ-TLY--QY-IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~-~~~--~~-~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      ..+||+|||+|..... ...  +. .||.+|+|||++..+..+.++|||||||+|.|++||+.+....
T Consensus       214 ~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence            9999999999966653 222  22 7999999999999989999999999999999999999888754

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.2e-40  Score=314.05  Aligned_cols=254  Identities=30%  Similarity=0.455  Sum_probs=201.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.+....  ....++..|+.+++.+     .|+||+++++.+...+.++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-----NSPYIVGFYGAFYNNGDIS   75 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-----CCCchhhhheeeecCCEEE
Confidence            36888999999999999999999999999999987542  2223455566666654     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+|++++ +|.+++.... ..+++..+..++.|++.||+|||+. .|++|+||||+||++  +.++.++|+|||.+...
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~-~~i~H~dl~~~ni~~--~~~~~~~l~d~g~~~~~  151 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEK-HKIIHRDVKPSNILV--NSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             EEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCC-CCeecCCCCHHHEEE--CCCCCEEEeecccchhh
Confidence            99999974 8888887653 5689999999999999999999961 589999999999999  66888999999998655


Q ss_pred             CCcc-ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 GQTL-YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN-----EVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .... ....++..|+|||++.+..++.++|+|||||++|+|++|..||...+     ..+.++.+..   .++...    
T Consensus       152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~----  224 (265)
T cd06605         152 VNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPPRL----  224 (265)
T ss_pred             HHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCCCCC----
Confidence            3221 12667889999999999999999999999999999999999997642     1122222211   100000    


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                  +                        .  ......+.+||.+||..||.+|||
T Consensus       225 ----------------------------~------------------------~--~~~~~~~~~li~~~l~~~p~~Rpt  250 (265)
T cd06605         225 ----------------------------P------------------------S--GKFSPDFQDFVNLCLIKDPRERPS  250 (265)
T ss_pred             ----------------------------C------------------------h--hhcCHHHHHHHHHHcCCCchhCcC
Confidence                                        0                        0  001125789999999999999999


Q ss_pred             HHHHhcCCCcCcC
Q psy11727        421 PTNVLRHEFFLKH  433 (437)
Q Consensus       421 ~~e~l~Hp~~~~~  433 (437)
                      +.+++.||||++.
T Consensus       251 ~~~ll~~~~~~~~  263 (265)
T cd06605         251 YKELLEHPFIKKY  263 (265)
T ss_pred             HHHHhhCchhhcc
Confidence            9999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-40  Score=310.54  Aligned_cols=252  Identities=30%  Similarity=0.417  Sum_probs=202.2

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++..... ....+..|+.++..+     .|+||+++++.+.+.+.+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-----RHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-----CCCChhceEEEEEeCCEEEE
Confidence            579999999999999999999999999999999874322 234566677776665     78999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +|||+++ +|.+++.... ..+++..+..++.|++.||+|||+  .|++|+||+|+||++  +.++.++|+|||++....
T Consensus        78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i--~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHE--TGKIHRDIKGANILL--TEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCChhhEEE--CCCCCEEECccccchhhh
Confidence            9999976 7777776542 458999999999999999999995  489999999999999  678889999999987654


Q ss_pred             Cc---cccccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..   .....++..|+|||.+.+.   .++.++|+|||||++|+|++|.+||.+.+.......+... ..++..+.    
T Consensus       153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~----  227 (262)
T cd06613         153 ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-NFPPPKLK----  227 (262)
T ss_pred             hhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCcccc----
Confidence            32   2335678889999999877   8899999999999999999999999887655444333221 00000000    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                           ........+.+||++||..||..|||+
T Consensus       228 -----------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~  254 (262)
T cd06613         228 -----------------------------------------------------DKEKWSPVFHDFIKKCLTKDPKKRPTA  254 (262)
T ss_pred             -----------------------------------------------------chhhhhHHHHHHHHHHcCCChhhCCCH
Confidence                                                                 000011257899999999999999999


Q ss_pred             HHHhcCCC
Q psy11727        422 TNVLRHEF  429 (437)
Q Consensus       422 ~e~l~Hp~  429 (437)
                      ++++.|||
T Consensus       255 ~~il~~~~  262 (262)
T cd06613         255 TKLLQHPF  262 (262)
T ss_pred             HHHhcCCC
Confidence            99999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3e-40  Score=315.95  Aligned_cols=249  Identities=31%  Similarity=0.424  Sum_probs=195.9

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||+||+|.+..+|+.||+|++.....    ....+..|+.++..+     .|+||+++++.+...+.+|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-----SSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-----CCCCEeeeeeEEecCCeEEEEEecC
Confidence            6999999999999999999999999864321    122334566666665     6899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC--cc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ--TL  270 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~--~~  270 (437)
                      ++ +|.+++.......+++..+..++.|++.||.|||+  .|++||||+|+||++  ++++.++|+|||.+.....  ..
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~Nil~--~~~~~~~l~dfg~~~~~~~~~~~  151 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ--RRIVYRDLKPENVLL--DDHGNVRISDLGLAVELKGGKKI  151 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEE--CCCCCEEEccCcchhhhccCCcc
Confidence            75 88888876554568999999999999999999995  489999999999999  6788899999999865532  22


Q ss_pred             ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChhhhccCCccchhhcc
Q psy11727        271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG-MPPGYLLHGASKTSKYFDR  349 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~  349 (437)
                      ....++..|+|||++.+..++.++|+|||||++|+|++|+.||...........+..... .+..               
T Consensus       152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------  216 (277)
T cd05577         152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE---------------  216 (277)
T ss_pred             ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccccc---------------
Confidence            234567889999999988899999999999999999999999987654222222211100 0000               


Q ss_pred             cCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHHHH
Q psy11727        350 LSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPTNV  424 (437)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~e~  424 (437)
                                        .                           +......+.+||.+||+.||.+||     |+.++
T Consensus       217 ------------------~---------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l  251 (277)
T cd05577         217 ------------------Y---------------------------PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEV  251 (277)
T ss_pred             ------------------C---------------------------CccCCHHHHHHHHHHccCChhHccCCCcccHHHH
Confidence                              0                           000012578999999999999999     99999


Q ss_pred             hcCCCcCcCCC
Q psy11727        425 LRHEFFLKHSV  435 (437)
Q Consensus       425 l~Hp~~~~~~~  435 (437)
                      ++||||.+.++
T Consensus       252 l~h~~~~~~~~  262 (277)
T cd05577         252 REHPLFKDLNW  262 (277)
T ss_pred             HhChhhhcCCh
Confidence            99999987664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.6e-40  Score=312.38  Aligned_cols=252  Identities=23%  Similarity=0.435  Sum_probs=198.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      +|+..+.||+|+||.||+|.+..+++.||+|++.....       ....+..|+.+++.+     .|+||+++++++.+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-----NHPHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-----CCCceehhhceeccC
Confidence            47888999999999999999999999999999864321       234556677777766     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG  261 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG  261 (437)
                      +++++||||+.+ +|.+++...  ..+++..+..++.||+.||+|||++  |++|+||+|+||++  +.++ .++|+|||
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~--~i~H~~i~~~nil~--~~~~~~~~l~dfg  149 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN--QIIHRDVKGANLLI--DSTGQRLRIADFG  149 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--cCCCCEEEEcccc
Confidence            999999999965 788888754  3589999999999999999999964  89999999999999  4444 59999999


Q ss_pred             CceecCCcc-------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQTL-------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ++.......       ....++..|+|||++.+..++.++|+|||||++++|++|.+||...........+.+...... 
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-  228 (268)
T cd06630         150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT-  228 (268)
T ss_pred             cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC-
Confidence            987654321       224578899999999988999999999999999999999999976543333332222100000 


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                                               .+.........+.++|.+||..|
T Consensus       229 ---------------------------------------------------------~~~~~~~~~~~~~~~i~~~l~~~  251 (268)
T cd06630         229 ---------------------------------------------------------APSIPEHLSPGLRDVTLRCLELQ  251 (268)
T ss_pred             ---------------------------------------------------------CCCCchhhCHHHHHHHHHHcCCC
Confidence                                                                     00000011125789999999999


Q ss_pred             CCCCCCHHHHhcCCCcC
Q psy11727        415 PKKRISPTNVLRHEFFL  431 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~  431 (437)
                      |.+|||+.++++||||+
T Consensus       252 p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         252 PEDRPPSRELLKHPVFR  268 (268)
T ss_pred             cccCcCHHHHhcCcccC
Confidence            99999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1989|consensus

Probab=100.00  E-value=9.1e-41  Score=343.54  Aligned_cols=248  Identities=26%  Similarity=0.362  Sum_probs=199.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEec-CCcccchHHHHHHHHHHHhhhcCCCCCcEEEeccee-eE----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF-TW----  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~-~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~-~~----  182 (437)
                      .-+++|.+.|.+|||+.||+|.+...|..||+|++- ......+...+|+.+++.|.    .|+|||.+++.. ..    
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~----gh~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS----GHKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc----CCCceeeEeccccccccCC
Confidence            346889999999999999999999888899999764 34555678889999999996    799999999933 21    


Q ss_pred             --CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        183 --KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       183 --~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                        .-.++|+||||. |+|.|++......+|++.++++|+.|+++|+++||.....|||||||-|||||  ..++++||||
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl--s~~g~~KLCD  189 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL--SADGNYKLCD  189 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE--cCCCCEEeCc
Confidence              136899999997 59999998765567999999999999999999999887779999999999999  6688899999


Q ss_pred             CCCceecCCcc------------ccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy11727        260 FGSSCHVGQTL------------YQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK  324 (437)
Q Consensus       260 FG~s~~~~~~~------------~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~  324 (437)
                      ||+++..-...            .....|+.|+|||++.   +.+.+.|+|||+|||+||-|+....||.......    
T Consensus       190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----  265 (738)
T KOG1989|consen  190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----  265 (738)
T ss_pred             ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----
Confidence            99997543221            1123588999999984   7789999999999999999999999998764321    


Q ss_pred             HHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      |+.                         +           +|.+|...                         .....|+
T Consensus       266 Iln-------------------------g-----------~Y~~P~~p-------------------------~ys~~l~  284 (738)
T KOG1989|consen  266 ILN-------------------------G-----------NYSFPPFP-------------------------NYSDRLK  284 (738)
T ss_pred             EEe-------------------------c-----------cccCCCCc-------------------------cHHHHHH
Confidence            111                         1           11122111                         1122689


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      +||..||+.||.+||++-|++.+
T Consensus       285 ~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  285 DLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             HHHHHHhccCcccCCCHHHHHHH
Confidence            99999999999999999998853

>KOG0577|consensus

Probab=100.00  E-value=8.3e-42  Score=334.38  Aligned_cols=252  Identities=25%  Similarity=0.380  Sum_probs=210.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .|.-++.||.|+||.||.|++..+.+.||||.+.-.    ......+..|+.++..+     .|||+|.+.++|......
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-----~HPntieYkgCyLre~Ta  101 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-----RHPNTIEYKGCYLREHTA  101 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-----cCCCcccccceeeccchH
Confidence            466778899999999999999999999999998632    12234566788888887     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||||-|+-.|++.-.. +++-+..+..|+.+.+.||+|||++  +.||||||..|||+  .+.|.|||+|||+|...
T Consensus       102 WLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~--~~IHRDiKAGNILL--se~g~VKLaDFGSAsi~  176 (948)
T KOG0577|consen  102 WLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH--NRIHRDIKAGNILL--SEPGLVKLADFGSASIM  176 (948)
T ss_pred             HHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh--hHHhhhccccceEe--cCCCeeeeccccchhhc
Confidence            9999999887777765544 5689999999999999999999976  69999999999999  77999999999998655


Q ss_pred             CCccccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTLYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      .. ..+++||++|||||+|..   +.|+-++||||||+++.||...+||.-..+....+--|...-  +|..        
T Consensus       177 ~P-AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe--sPtL--------  245 (948)
T KOG0577|consen  177 AP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--SPTL--------  245 (948)
T ss_pred             Cc-hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC--CCCC--------
Confidence            43 567899999999999974   579999999999999999999999998888777766664421  1100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                      ..++|.   +.|+.||..||+.-|.+|||.++
T Consensus       246 ------------------------------------------------qs~eWS---~~F~~Fvd~CLqKipqeRptse~  274 (948)
T KOG0577|consen  246 ------------------------------------------------QSNEWS---DYFRNFVDSCLQKIPQERPTSEE  274 (948)
T ss_pred             ------------------------------------------------CCchhH---HHHHHHHHHHHhhCcccCCcHHH
Confidence                                                            011111   25899999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +|.|+|+..-.
T Consensus       275 ll~H~fv~R~R  285 (948)
T KOG0577|consen  275 LLKHRFVLRER  285 (948)
T ss_pred             HhhcchhccCC
Confidence            99999997643

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.2e-40  Score=315.75  Aligned_cols=238  Identities=21%  Similarity=0.235  Sum_probs=193.5

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeE----CCEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW----KNHLC  187 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~----~~~~~  187 (437)
                      ..||+|++|.||+|..  +|+.||||.++.....    ...+.+|+.++..+     .|||||++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-----DSNNILKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-----CCCCEEEEeeeEEecccCCCceE
Confidence            4689999999999976  6889999999754322    24455788888776     78899999999877    45789


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+.+ +|.+++...  ..+++.....++.|++.||.|||.. .+++||||||+|||+  ++++.+||+|||++...
T Consensus        99 lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~Hrdlkp~nill--~~~~~~kl~dfg~~~~~  173 (283)
T PHA02988         99 LILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKY-TNKPYKNLTSVSFLV--TENYKLKIICHGLEKIL  173 (283)
T ss_pred             EEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhc-CCCCCCcCChhhEEE--CCCCcEEEcccchHhhh
Confidence            99999965 788888764  3589999999999999999999963 478999999999999  67889999999999876


Q ss_pred             CCccccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        267 GQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       267 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ........|+..|+|||++.+  ..++.++|||||||++|||++|+.||.+.+..+....+......++.          
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~----------  243 (283)
T PHA02988        174 SSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL----------  243 (283)
T ss_pred             ccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC----------
Confidence            655556678999999999976  68999999999999999999999999988776666555432111100          


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                              |                           ......+.+||.+||+.||.+|||++++
T Consensus       244 ------------------------~---------------------------~~~~~~l~~li~~cl~~dp~~Rps~~el  272 (283)
T PHA02988        244 ------------------------P---------------------------LDCPLEIKCIVEACTSHDSIKRPNIKEI  272 (283)
T ss_pred             ------------------------C---------------------------CcCcHHHHHHHHHHhcCCcccCcCHHHH
Confidence                                    0                           0001257899999999999999999999


Q ss_pred             hc
Q psy11727        425 LR  426 (437)
Q Consensus       425 l~  426 (437)
                      ++
T Consensus       273 l~  274 (283)
T PHA02988        273 LY  274 (283)
T ss_pred             HH
Confidence            85

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=2.2e-40  Score=313.14  Aligned_cols=249  Identities=27%  Similarity=0.397  Sum_probs=200.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +|++.+.||+|+||.||+|.+..++..||+|++....    ...+....|+.+++.+     .||||+++++.+...+.+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-----NHPFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-----CCCChHHHHHhhcCCCeE
Confidence            4899999999999999999999999999999997432    2234556677766655     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++|+||+.+ +|.+.+...  ..+++..+..++.||+.||.|||+  .|++|+||+|+||++  ++++.++|+|||++..
T Consensus        76 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~--~~~~~~~l~d~~~~~~  149 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS--KGIIHRDIKPDNILL--DEQGHVHITDFNIATK  149 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEE--cCCCCEEEeecccccc
Confidence            999999965 788888765  468999999999999999999995  489999999999999  6788999999999876


Q ss_pred             cCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....  .....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+... ...+..........        
T Consensus       150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~--------  220 (258)
T cd05578         150 VTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-RDQIRAKQETADVL--------  220 (258)
T ss_pred             cCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-HHHHHHHhcccccc--------
Confidence            5433  234567888999999998889999999999999999999999998776421 11111110000000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH--
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP--  421 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~--  421 (437)
                                              .                           +......+.++|++||..||.+|||.  
T Consensus       221 ------------------------~---------------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~  249 (258)
T cd05578         221 ------------------------Y---------------------------PATWSTEAIDAINKLLERDPQKRLGDNL  249 (258)
T ss_pred             ------------------------C---------------------------cccCcHHHHHHHHHHccCChhHcCCccH
Confidence                                    0                           00011267899999999999999999  


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      +|+++||||
T Consensus       250 ~~l~~~~~~  258 (258)
T cd05578         250 KDLKNHPYF  258 (258)
T ss_pred             HHHhcCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0983|consensus

Probab=100.00  E-value=3.8e-41  Score=303.20  Aligned_cols=256  Identities=29%  Similarity=0.401  Sum_probs=203.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++.+.+..||.|+.|+||+++.+.+|...|||.+....  ...+++...+.++-.-    .++|+||+.+|+|..+..++
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s----~dcpyIV~c~GyFi~n~dV~  167 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVQCFGYFITNTDVF  167 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc----cCCCeeeeeeeEEeeCchHH
Confidence            34556788999999999999999999999999997432  2223333344333222    26799999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +.||.|+.-...+++.- .+++++..+-++...+..||.||..+ -||||||+||+|||+  |+.|+|||||||.|-.+-
T Consensus       168 IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILl--De~GniKlCDFGIsGrlv  243 (391)
T KOG0983|consen  168 ICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILL--DERGNIKLCDFGISGRLV  243 (391)
T ss_pred             HHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEE--ccCCCEEeecccccceee
Confidence            99999986555555543 36699999999999999999999775 489999999999999  899999999999996653


Q ss_pred             C--ccccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        268 Q--TLYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       268 ~--~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +  ..+...|.+.|||||.+.-   -.|+..+||||||+.++||.||+.||.+ +.+.+++.++.+  ..||-  ++...
T Consensus       244 dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln--~ePP~--L~~~~  319 (391)
T KOG0983|consen  244 DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN--EEPPL--LPGHM  319 (391)
T ss_pred             cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh--cCCCC--CCccc
Confidence            3  3345678899999999964   3689999999999999999999999988 456677777765  22221  10000


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                     .+         ...|++|+..||..|+.+||.-
T Consensus       320 -----------------------------------------------gF---------Sp~F~~fv~~CL~kd~r~RP~Y  343 (391)
T KOG0983|consen  320 -----------------------------------------------GF---------SPDFQSFVKDCLTKDHRKRPKY  343 (391)
T ss_pred             -----------------------------------------------Cc---------CHHHHHHHHHHhhcCcccCcch
Confidence                                                           00         0168999999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      .++|+|||+...
T Consensus       344 ~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  344 NKLLEHPFIKRY  355 (391)
T ss_pred             HHHhcCcceeec
Confidence            999999999764

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=6.9e-40  Score=314.14  Aligned_cols=248  Identities=25%  Similarity=0.402  Sum_probs=190.1

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      .||+|+||.||++.+..+++.+|+|.+......    ......|..+++.+..  ..|++|+.+++++...+..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh--CCCCcEeEEEEEEecCCeEEEEEec
Confidence            479999999999999999999999998643221    1122334433333322  3689999999999999999999999


Q ss_pred             ccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc-c
Q psy11727        193 LSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-L  270 (437)
Q Consensus       193 ~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~-~  270 (437)
                      +++ +|.+++....  .+++..+..++.|++.||+|||++  ||+||||||+|||+  ++++.++|+|||++...... .
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~--~ivH~dikp~Nil~--~~~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNR--FVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CcCCCCCCHHHEEE--CCCCCEEEccCCcceeccccCc
Confidence            965 7877776543  589999999999999999999964  89999999999999  67888999999998755332 2


Q ss_pred             ccccccccccChhhhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        271 YQYIQSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD--QMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~--~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ....|+..|+|||++. +..++.++|+|||||++|+|++|..||.+.....  .......  ..++.             
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~-------------  217 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TVNVE-------------  217 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh--cCCcC-------------
Confidence            2356899999999986 4568999999999999999999999997643221  1111100  00000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHH
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPT  422 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~  422 (437)
                                          .                           +......+.+||.+||..||.+||     |++
T Consensus       218 --------------------~---------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (279)
T cd05633         218 --------------------L---------------------------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQ  250 (279)
T ss_pred             --------------------C---------------------------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence                                0                           000112578999999999999999     699


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++++||||++..
T Consensus       251 ~~~~h~~~~~~~  262 (279)
T cd05633         251 EVKEHVFFKGID  262 (279)
T ss_pred             HHHhCccccCCC
Confidence            999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=4.4e-40  Score=324.01  Aligned_cols=283  Identities=34%  Similarity=0.563  Sum_probs=216.9

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|.+...   .........|+.++..+.    .|+||++++++|...
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~ni~~~~~~~~~~   79 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG----DHPNIVKLLNVIKAE   79 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc----CCCCccceeeeeccC
Confidence            4567899999999999999999999989999999988532   112234455777776652    689999999988653


Q ss_pred             --CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 --NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 --~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                        ..+++||||++++|.+++...   .+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.+||+|||
T Consensus        80 ~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~--~~i~H~dl~p~nill--~~~~~~kl~d~g  152 (337)
T cd07852          80 NDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS--GNVIHRDLKPSNILL--NSDCRVKLADFG  152 (337)
T ss_pred             CCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--cCCCcEEEeecc
Confidence              478999999999998888764   47889999999999999999995  489999999999999  778899999999


Q ss_pred             CceecCC--------ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        262 SSCHVGQ--------TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       262 ~s~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      .+.....        ....+.|+..|+|||++.+ ..++.++|+|||||++|+|++|++||.+....+...++....+.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07852         153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP  232 (337)
T ss_pred             chhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            9865432        1223568889999998865 457899999999999999999999999998888888888888777


Q ss_pred             ChhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        333 PGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       333 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                      +...+......  ..+++.+...                ........                  .......+.+||.+|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------~~~~~~~l~~li~~~  278 (337)
T cd07852         233 SAEDIESIKSPFAATMLDSLPSR----------------PRKPLDEL------------------LPKASDDALDLLKKL  278 (337)
T ss_pred             CHHHHHHHHhhhHHHhhhhcccc----------------cccchhhh------------------ccCCCHHHHHHHHHh
Confidence            65443322110  0111100000                00000000                  001123679999999


Q ss_pred             cccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        411 LTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |+.||.+|||+.++++||||++..
T Consensus       279 l~~~P~~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         279 LVFNPNKRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             ccCCcccccCHHHHhhChhhhhhc
Confidence            999999999999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=8.9e-40  Score=312.69  Aligned_cols=252  Identities=29%  Similarity=0.459  Sum_probs=201.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..|+..+.||.|+||.||+|.+..++..||+|++....  .....+..|+.++..+     .|+||+++++++.+.++++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECCEEE
Confidence            45888899999999999999999999999999987432  2233455566666655     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...   .+++..+..++.|++.||+|||+  .+++|+||+|+||++  +.++.++|+|||++...
T Consensus        79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~--~~ivH~dl~p~Nil~--~~~~~~~l~dfg~~~~~  151 (277)
T cd06640          79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHS--EKKIHRDIKAANVLL--SEQGDVKLADFGVAGQL  151 (277)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--CCccCcCCChhhEEE--cCCCCEEEcccccceec
Confidence            99999966 788887653   48899999999999999999995  489999999999999  66788999999999665


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||++.+..++.++|+|||||++|||++|.+||...+.......+..  +.++.         
T Consensus       152 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~~---------  220 (277)
T cd06640         152 TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNPPT---------  220 (277)
T ss_pred             cCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--CCCCC---------
Confidence            432   2234578889999999988899999999999999999999999987665433322210  00000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                         ........+.+||.+||+.||.+|||+.+
T Consensus       221 ---------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (277)
T cd06640         221 ---------------------------------------------------LTGEFSKPFKEFIDACLNKDPSFRPTAKE  249 (277)
T ss_pred             ---------------------------------------------------CchhhhHHHHHHHHHHcccCcccCcCHHH
Confidence                                                               00011125789999999999999999999


Q ss_pred             HhcCCCcCcCCC
Q psy11727        424 VLRHEFFLKHSV  435 (437)
Q Consensus       424 ~l~Hp~~~~~~~  435 (437)
                      +++||||.+...
T Consensus       250 il~~~~~~~~~~  261 (277)
T cd06640         250 LLKHKFIVKNAK  261 (277)
T ss_pred             HHhChHhhhcch
Confidence            999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=6.5e-40  Score=310.67  Aligned_cols=248  Identities=27%  Similarity=0.453  Sum_probs=200.2

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||.|+||.||+|.+..+++.||+|++.....    ....+..|+.++..+     .|+||+++++.+.+++.+++||||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-----NHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-----CCCCEeeeeeeEEcCCccEEEEecC
Confidence            6999999999999999999999999864321    223455666666555     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc--c
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--L  270 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~--~  270 (437)
                      ++ +|.+++....  .+++..+..++.||+.||+|||+  .|++|+||+|+||++  +.++.++|+|||++......  .
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~--~~~~h~dl~~~nilv--~~~~~~~l~df~~~~~~~~~~~~  149 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHN--RGIIYRDLKPENLLL--DSNGYVKLVDFGFAKKLKSGQKT  149 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEE--cCCCCEEEeeCCcccccCccccc
Confidence            65 8998887653  48999999999999999999996  489999999999999  66788999999999776543  3


Q ss_pred             ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChhhhccCCccchhhc
Q psy11727        271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN--EVDQMTKIIEVLGMPPGYLLHGASKTSKYFD  348 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~  348 (437)
                      ....++..|+|||++.+..++.++|+||||+++|+|++|.+||....  ..+....+......+.               
T Consensus       150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------  214 (262)
T cd05572         150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE---------------  214 (262)
T ss_pred             ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC---------------
Confidence            34567889999999988889999999999999999999999998776  4344443321100000               


Q ss_pred             ccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-----HHH
Q psy11727        349 RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-----PTN  423 (437)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-----~~e  423 (437)
                                         .|                           ......+.+||.+||+.||.+|||     ++|
T Consensus       215 -------------------~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~  248 (262)
T cd05572         215 -------------------FP---------------------------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKD  248 (262)
T ss_pred             -------------------CC---------------------------cccCHHHHHHHHHHccCChhhCcCCcccCHHH
Confidence                               00                           000125799999999999999999     999


Q ss_pred             HhcCCCcCcCCCCC
Q psy11727        424 VLRHEFFLKHSVDN  437 (437)
Q Consensus       424 ~l~Hp~~~~~~~~~  437 (437)
                      +++||||+...++.
T Consensus       249 l~~~~~~~~~~~~~  262 (262)
T cd05572         249 IKKHKWFNGFDWEG  262 (262)
T ss_pred             HhcChhhhCCCCCC
Confidence            99999999887663

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.2e-39  Score=316.40  Aligned_cols=254  Identities=28%  Similarity=0.429  Sum_probs=201.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+.....    ....+..|+.++..+     .|+||+++++.+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-----ENPFVVSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEecCCE
Confidence            368999999999999999999999999999999864321    122344566666544     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||++| +|.+++...  ..+++..+..++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||++.
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~NIll--~~~~~~~l~dfg~~~  149 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHN--YGIVHRDLKPDNLLI--TSMGHIKLTDFGLSK  149 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHEEE--CCCCCEEEeeCCCcc
Confidence            9999999966 788888665  358999999999999999999995  489999999999999  678889999999875


Q ss_pred             ecCCc------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        265 HVGQT------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       265 ~~~~~------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      .....                  .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+..+....+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~  229 (305)
T cd05609         150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI  229 (305)
T ss_pred             ccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            31100                  012356778999999998899999999999999999999999999877666555554


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      ......|..                                                        .    ......+.+|
T Consensus       230 ~~~~~~~~~--------------------------------------------------------~----~~~~~~~~~l  249 (305)
T cd05609         230 SDDIEWPEG--------------------------------------------------------D----EALPADAQDL  249 (305)
T ss_pred             hcccCCCCc--------------------------------------------------------c----ccCCHHHHHH
Confidence            321100000                                                        0    0001157899


Q ss_pred             HHHccccCCCCCCC---HHHHhcCCCcCcCC
Q psy11727        407 ILRMLTYDPKKRIS---PTNVLRHEFFLKHS  434 (437)
Q Consensus       407 i~~~L~~dP~~R~t---~~e~l~Hp~~~~~~  434 (437)
                      |.+||+.||.+|||   +.++|+||||....
T Consensus       250 i~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         250 ISRLLRQNPLERLGTGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             HHHHhccChhhccCccCHHHHHhCccccCCC
Confidence            99999999999998   89999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.6e-40  Score=318.03  Aligned_cols=254  Identities=26%  Similarity=0.363  Sum_probs=202.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ..+|.+.+.||+|+||+||+|.+..+++.||+|.+......    ...+..|+.++..+     .|+||+++.+++.+.+
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~~~~~~~~~~   88 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-----RHPNTIEYKGCYLREH   88 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEEeCC
Confidence            46799999999999999999999999999999998633211    23345566666654     7899999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ..++||||+.+++.+++.... ..+++..+..++.||+.||.|||+  .||+||||+|+||++  ++++.++|+|||++.
T Consensus        89 ~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~--~~i~H~dl~p~nIl~--~~~~~~kL~dfg~~~  163 (307)
T cd06607          89 TAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHS--HERIHRDIKAGNILL--TEPGTVKLADFGSAS  163 (307)
T ss_pred             eEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEEE--CCCCCEEEeecCcce
Confidence            999999999999888876543 458999999999999999999995  489999999999999  678889999999986


Q ss_pred             ecCCccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..... ....++..|+|||++.   ...++.++||||||+++|||++|.+||.+.+.......+...  .++...     
T Consensus       164 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~-----  235 (307)
T cd06607         164 LVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLS-----  235 (307)
T ss_pred             ecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCCCCC-----
Confidence            55433 3456788999999985   356889999999999999999999999877655443332110  000000     


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                            ...-...+.+||.+||+.||.+|||+
T Consensus       236 ------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~  261 (307)
T cd06607         236 ------------------------------------------------------SNDWSDYFRNFVDSCLQKIPQDRPSS  261 (307)
T ss_pred             ------------------------------------------------------chhhCHHHHHHHHHHhcCChhhCcCH
Confidence                                                                  00001257899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      .+++.||||.+..
T Consensus       262 ~~il~~~~~~~~~  274 (307)
T cd06607         262 EELLKHRFVLRER  274 (307)
T ss_pred             HHHhcChhhcccC
Confidence            9999999997643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.1e-39  Score=312.65  Aligned_cols=251  Identities=24%  Similarity=0.372  Sum_probs=192.3

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEecCCcccc----hHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      .||+|+||.||+|.+..+++.||+|++.......    .....|..+++.+..  ..|++|+.+.+.+...+.+++||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEec
Confidence            4799999999999999999999999987432211    123334444444433  3789999999999999999999999


Q ss_pred             ccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC-cc
Q psy11727        193 LSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-TL  270 (437)
Q Consensus       193 ~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~-~~  270 (437)
                      +.| +|.+++...  ..+++..++.++.|++.||+|||+  .+|+||||||+||++  ++++.++|+|||++..... ..
T Consensus        79 ~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~nili--~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          79 MNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCEEcCCCCHHHEEE--CCCCCEEEccCcCccccCccCC
Confidence            965 787777654  358999999999999999999995  489999999999999  6778899999999875532 22


Q ss_pred             ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcc
Q psy11727        271 YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDR  349 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  349 (437)
                      ....|+..|+|||++.+. .++.++|+||+||++|+|++|..||.+................++.               
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------  217 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE---------------  217 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC---------------
Confidence            345789999999999754 6899999999999999999999999875322111111000000000               


Q ss_pred             cCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-----CHHHH
Q psy11727        350 LSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-----SPTNV  424 (437)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-----t~~e~  424 (437)
                                        .|.                           .....+.++|.+||..||.+||     |+.++
T Consensus       218 ------------------~~~---------------------------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~l  252 (278)
T cd05606         218 ------------------LPD---------------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV  252 (278)
T ss_pred             ------------------CCC---------------------------cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHH
Confidence                              000                           0012578999999999999999     99999


Q ss_pred             hcCCCcCcCCC
Q psy11727        425 LRHEFFLKHSV  435 (437)
Q Consensus       425 l~Hp~~~~~~~  435 (437)
                      ++||||.+...
T Consensus       253 l~~~~~~~~~~  263 (278)
T cd05606         253 KEHPFFRSLDW  263 (278)
T ss_pred             HhCccccCCCc
Confidence            99999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.1e-39  Score=307.98  Aligned_cols=246  Identities=27%  Similarity=0.449  Sum_probs=200.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +|++.+.||+|+||.||++.+..++..+|+|.++...  ........|+.+++.+     .|+||+++++.+.+.+++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-----KHPNIVAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEE
Confidence            5889999999999999999999999999999986332  2234555676666655     78999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.||+.||.|||+  .||+|+||||+||++  ++++.++|+|||++....
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dl~p~nili--~~~~~~~l~dfg~~~~~~  151 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE--KRVLHRDIKSKNIFL--TQNGKVKLGDFGSARLLT  151 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEE--CCCCcEEEcccCcceeec
Confidence            9999965 78888876554568999999999999999999995  489999999999999  678889999999987654


Q ss_pred             Cc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   .....|+..|+|||++.+..++.++|+||||+++|+|++|.+||...+.......+......+.           
T Consensus       152 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  220 (255)
T cd08219         152 SPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL-----------  220 (255)
T ss_pred             ccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC-----------
Confidence            32   2245688899999999998999999999999999999999999988776555444432110000           


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                              |                           ......+.+||.+||+.||.+|||+.++
T Consensus       221 ------------------------~---------------------------~~~~~~~~~li~~~l~~~P~~Rp~~~~i  249 (255)
T cd08219         221 ------------------------P---------------------------SHYSYELRSLIKQMFKRNPRSRPSATTI  249 (255)
T ss_pred             ------------------------C---------------------------cccCHHHHHHHHHHHhCCcccCCCHHHH
Confidence                                    0                           0001157899999999999999999999


Q ss_pred             hcC
Q psy11727        425 LRH  427 (437)
Q Consensus       425 l~H  427 (437)
                      +.-
T Consensus       250 l~~  252 (255)
T cd08219         250 LSR  252 (255)
T ss_pred             hhc
Confidence            864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0665|consensus

Probab=100.00  E-value=4.1e-41  Score=309.32  Aligned_cols=291  Identities=33%  Similarity=0.514  Sum_probs=234.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-  184 (437)
                      ..+|.-...+|.|+- .|..|.+.-+++.||+|.+...   ....+++.+|..++..+     .|+||++++.+|.... 
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-----~~~nii~l~n~ftP~~~   89 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-----NHKNIISLLNVFTPQKT   89 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-----cccceeeeeeccCcccc
Confidence            457888999999998 8889999999999999987532   23346677788887776     7789999999997653 


Q ss_pred             -----EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        185 -----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       185 -----~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                           ..|+|||+|..+|.+.+...    +.-..+..++.|+++|+.+||+  .||+||||||+||++  +.+..+||.|
T Consensus        90 l~~~~e~y~v~e~m~~nl~~vi~~e----lDH~tis~i~yq~~~~ik~lhs--~~IihRdLkPsnivv--~~~~~lKi~d  161 (369)
T KOG0665|consen   90 LEEFQEVYLVMELMDANLCQVILME----LDHETISYILYQMLCGIKHLHS--AGIIHRDLKPSNIVV--NSDCTLKILD  161 (369)
T ss_pred             HHHHHhHHHHHHhhhhHHHHHHHHh----cchHHHHHHHHHHHHHHHHHHh--cceeecccCccccee--cchhheeecc
Confidence                 68999999999999988843    6778899999999999999995  589999999999999  7788899999


Q ss_pred             CCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        260 FGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       260 FG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ||+|......  .+.++.|+.|+|||++.+..|...+||||+|||+.||++|...|.|.+..++..++.+.+|.|...+.
T Consensus       162 fg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~  241 (369)
T KOG0665|consen  162 FGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM  241 (369)
T ss_pred             chhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence            9999876544  45688999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCccch-hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        338 HGASKTSK-YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       338 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      .+...... |..-.+  .|..                    +..+.-.|+..-......+..+.-.++||+.+||..||+
T Consensus       242 ~qL~~~~r~yv~~~~--~y~~--------------------~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe  299 (369)
T KOG0665|consen  242 KQLQPTVRNYVENRP--QYQA--------------------ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPE  299 (369)
T ss_pred             HHhhHHHHHHhhcCh--Hhhc--------------------cchhhhCCcccccccccCCccchHHHHHHHHHhhccChh
Confidence            87776533 332111  1110                    011111222222233333334444678999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCCC
Q psy11727        417 KRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +|.|+++||+||||+=+.+
T Consensus       300 ~Risv~daL~HPY~~vw~~  318 (369)
T KOG0665|consen  300 KRISVDDALRHPYIKVWYD  318 (369)
T ss_pred             hcccHHHHhcCCeeeeecc
Confidence            9999999999999984443

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.2e-39  Score=308.34  Aligned_cols=253  Identities=32%  Similarity=0.445  Sum_probs=204.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|++.+.||+|++|.||+|.+..+++.||+|++.....  ....+..|+..+..+     .|+||+++++++...+.++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-----ESPYVVKCYGAFYKEGEIS   75 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEccCCeEE
Confidence            368899999999999999999999999999999875432  234566677776665     5899999999999999999


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||++ ++|.+++...  ..+++..+..++.||+.||+|||+. .|++||||+|+||++  +.++.++|+|||++...
T Consensus        76 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~-~~~~H~~l~~~ni~~--~~~~~~~l~df~~~~~~  150 (264)
T cd06623          76 IVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTK-RHIIHRDIKPSNLLI--NSKGEVKIADFGISKVL  150 (264)
T ss_pred             EEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhcc-CCCccCCCCHHHEEE--CCCCCEEEccCccceec
Confidence            9999997 5899888765  4589999999999999999999951 589999999999999  67889999999998766


Q ss_pred             CCccc---cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 GQTLY---QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN---EVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 ~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   ...++..|+|||.+.+..++.++|+||||+++|+|++|.+||....   ..+....+..   ......    
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~----  223 (264)
T cd06623         151 ENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPPPSL----  223 (264)
T ss_pred             ccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCCCCC----
Confidence            43222   3467889999999999899999999999999999999999998764   2222222221   000000    


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh-hhhHHHHHHHHccccCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA-DYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                             +.. ....+.++|++||..+|.+||
T Consensus       224 -------------------------------------------------------~~~~~~~~l~~li~~~l~~~p~~R~  248 (264)
T cd06623         224 -------------------------------------------------------PAEEFSPEFRDFISACLQKDPKKRP  248 (264)
T ss_pred             -------------------------------------------------------CcccCCHHHHHHHHHHccCChhhCC
Confidence                                                                   000 112578999999999999999


Q ss_pred             CHHHHhcCCCcCcCC
Q psy11727        420 SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~  434 (437)
                      |+.++++||||+..+
T Consensus       249 ~~~~ll~~~~~~~~~  263 (264)
T cd06623         249 SAAELLQHPFIKKAD  263 (264)
T ss_pred             CHHHHHhCHHHHhcc
Confidence            999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.3e-39  Score=310.40  Aligned_cols=252  Identities=26%  Similarity=0.437  Sum_probs=195.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-----------chHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----------LNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.++.....           .+.+..|+.++..+     .|+|+++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-----DHLNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-----CCCCcceEEEE
Confidence            588999999999999999999999999999988632111           12334455555554     78999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +...+..++||||+.+ +|.+++...  ..+++..++.++.||+.||.|||++  |++|+||+|+||++  +.++.++|+
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~~~nil~--~~~~~~~l~  150 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK--GILHRDLKADNLLV--DADGICKIS  150 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC--CeeecCCChhhEEE--cCCCeEEEe
Confidence            9999999999999965 788888765  3589999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCc-----cccccccccccChhhhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        259 DFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       259 DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      |||++......     .....++..|+|||++.+..  ++.++|+||||++++++++|..||...........+......
T Consensus       151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  230 (272)
T cd06629         151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA  230 (272)
T ss_pred             eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence            99998754322     22345788999999998754  889999999999999999999999765443322221110000


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++                                  .+.                       .........+.+||.+||
T Consensus       231 ~~----------------------------------~~~-----------------------~~~~~~~~~~~~li~~~l  253 (272)
T cd06629         231 PP----------------------------------IPP-----------------------DVSMNLSPVALDFLNACF  253 (272)
T ss_pred             Cc----------------------------------CCc-----------------------cccccCCHHHHHHHHHHh
Confidence            00                                  000                       000001126799999999


Q ss_pred             ccCCCCCCCHHHHhcCCCc
Q psy11727        412 TYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~  430 (437)
                      ..||.+|||+.++|+|||+
T Consensus       254 ~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         254 TINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cCChhhCCCHHHHhhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.3e-39  Score=309.52  Aligned_cols=249  Identities=26%  Similarity=0.442  Sum_probs=194.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc------cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-  182 (437)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+.....      ....+..|+.++..+     .|+||+++++++.. 
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   76 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-----QHERIVQYYGCLRDR   76 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-----CCCCeeeEEEEEEcC
Confidence            368899999999999999999999999999999864321      123455577666665     78999999998875 


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       .+.++++|||+++ +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.++|+||
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~--~~i~H~~l~p~nil~--~~~~~~~l~df  150 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHS--NMIVHRDIKGANILR--DSAGNVKLGDF  150 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEE--CCCCCEEEccC
Confidence             3688999999965 7988887653  48999999999999999999995  489999999999999  67888999999


Q ss_pred             CCceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        261 GSSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       261 G~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |++......      .....++..|+|||++.+..++.++|+|||||++|+|++|++||...........+..   .+..
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~~  227 (266)
T cd06651         151 GASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTN  227 (266)
T ss_pred             CCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCCC
Confidence            998654321      1224578889999999998899999999999999999999999987654333322211   0000


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                                                +.........+.+|| +||..|
T Consensus       228 ----------------------------------------------------------~~~~~~~~~~~~~li-~~~~~~  248 (266)
T cd06651         228 ----------------------------------------------------------PQLPSHISEHARDFL-GCIFVE  248 (266)
T ss_pred             ----------------------------------------------------------CCCchhcCHHHHHHH-HHhcCC
Confidence                                                                      000000112467888 677789


Q ss_pred             CCCCCCHHHHhcCCCcC
Q psy11727        415 PKKRISPTNVLRHEFFL  431 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~  431 (437)
                      |++|||++|+++||||+
T Consensus       249 p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         249 ARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hhhCcCHHHHhcCcccc
Confidence            99999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0696|consensus

Probab=100.00  E-value=6.2e-41  Score=316.44  Aligned_cols=258  Identities=28%  Similarity=0.434  Sum_probs=212.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc-CCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+|..+.+||+|+||.|.+|..+.+.+.+|||++++.-. ......|..+.++-..+ .-..|.+++++.+|+.-+.+|
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi-iQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhcccee-eecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            4578889999999999999999999999999999975422 22222233333322211 125679999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+.| +|.-.+...  +.+.+..+..++.+|+-||-+||++  |||.||||.+||||  +.+|+|||+|||+++.-
T Consensus       427 FVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~k--gIiYRDLKLDNvmL--d~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSK--GIIYRDLKLDNVML--DSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcC--CeeeeeccccceEe--ccCCceEeeeccccccc
Confidence            99999955 666666654  3588999999999999999999964  89999999999999  88999999999998643


Q ss_pred             ---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 ---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                         +....++|||+.|+|||++..++|+.++|+||+||+||||+.|++||.|.++.+.++.|++..-.-|..+.      
T Consensus       501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS------  574 (683)
T KOG0696|consen  501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS------  574 (683)
T ss_pred             ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc------
Confidence               55667899999999999999999999999999999999999999999999999999999885332222111      


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---  420 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---  420 (437)
                                                                               .+..++...+|...|.+|..   
T Consensus       575 ---------------------------------------------------------kEAv~ickg~ltK~P~kRLGcg~  597 (683)
T KOG0696|consen  575 ---------------------------------------------------------KEAVAICKGLLTKHPGKRLGCGP  597 (683)
T ss_pred             ---------------------------------------------------------HHHHHHHHHHhhcCCccccCCCC
Confidence                                                                     14578999999999999986   


Q ss_pred             --HHHHhcCCCcCcCCCC
Q psy11727        421 --PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       421 --~~e~l~Hp~~~~~~~~  436 (437)
                        -+++-.||||+..+++
T Consensus       598 ~ge~di~~H~FFR~iDWe  615 (683)
T KOG0696|consen  598 EGERDIREHPFFRRIDWE  615 (683)
T ss_pred             ccccchhhCcchhhccHH
Confidence              3678899999998775

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.3e-40  Score=314.06  Aligned_cols=262  Identities=27%  Similarity=0.414  Sum_probs=202.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||+||++.+..++..||+|++....  .....+..|+.++..+     .|+||+++++++...+.+
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~   78 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-----RSPYIVSFYGAFLNENNI   78 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-----CCCCcceEeeeEecCCEE
Confidence            357999999999999999999999999999999886432  2234566777777665     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++...  ..+++..+..++.|++.||.|||+. .|++||||||+||++  ++++.++|+|||++..
T Consensus        79 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~--~~~~~~~l~d~gl~~~  153 (284)
T cd06620          79 CMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILV--NSRGQIKLCDFGVSGE  153 (284)
T ss_pred             EEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEE--CCCCcEEEccCCcccc
Confidence            999999976 777777654  3589999999999999999999963 379999999999999  6788899999999865


Q ss_pred             cCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChhhhccC
Q psy11727        266 VGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ----MTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       266 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~p~~~~~~~~  340 (437)
                      .... .....|+..|+|||++.+..++.++|+|||||++|+|++|.+||........    ...+.+..    ..++...
T Consensus       154 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  229 (284)
T cd06620         154 LINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL----QQIVQEP  229 (284)
T ss_pred             hhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH----HHHhhcc
Confidence            4222 2345788999999999888999999999999999999999999987554211    00010000    0000000


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      ..                        ..+                          .......+.+||.+||+.||.+|||
T Consensus       230 ~~------------------------~~~--------------------------~~~~~~~~~~li~~~l~~dp~~Rpt  259 (284)
T cd06620         230 PP------------------------RLP--------------------------SSDFPEDLRDFVDACLLKDPTERPT  259 (284)
T ss_pred             CC------------------------CCC--------------------------chhcCHHHHHHHHHHhcCCcccCcC
Confidence            00                        000                          0001125789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      +.|+++||||.+..
T Consensus       260 ~~e~~~~~~~~~~~  273 (284)
T cd06620         260 PQQLCAMPPFIQAL  273 (284)
T ss_pred             HHHHhcCccccccc
Confidence            99999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.5e-39  Score=307.55  Aligned_cols=251  Identities=29%  Similarity=0.411  Sum_probs=199.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNH  185 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~  185 (437)
                      +|++.+.||.|+||.||+|.+..++..||+|++.....   ...++..|+.+++.+     .|+||+++++++..  ...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-----KHPNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-----CCCccceeeeeeecCCCCE
Confidence            58899999999999999999999999999999864321   223444566666655     78999999998764  457


Q ss_pred             EEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCC---CCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        186 LCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSP---ELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~---~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      ++++|||+++ +|.+++...  ....+++..++.++.||+.||+|||..   ..+++|+||||+||++  +.++.+||+|
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili--~~~~~~kl~d  153 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL--DANNNVKLGD  153 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE--ecCCCEEEec
Confidence            8999999965 888888653  234689999999999999999999932   3479999999999999  5678899999


Q ss_pred             CCCceecCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        260 FGSSCHVGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       260 FG~s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ||++.......   ....++..|+|||++.+..++.++|+||||+++++|++|..||...+.......+....  .+.  
T Consensus       154 ~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~--  229 (265)
T cd08217         154 FGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK--FRR--  229 (265)
T ss_pred             ccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC--CCC--
Confidence            99997764332   24568899999999999889999999999999999999999999877554444332210  000  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                   ++                                             ......+.+|+.+||+.+|.
T Consensus       230 -------------~~---------------------------------------------~~~~~~~~~l~~~~l~~~p~  251 (265)
T cd08217         230 -------------IP---------------------------------------------YRYSSELNEVIKSMLNVDPD  251 (265)
T ss_pred             -------------Cc---------------------------------------------cccCHHHHHHHHHHccCCcc
Confidence                         00                                             00012578999999999999


Q ss_pred             CCCCHHHHhcCCCc
Q psy11727        417 KRISPTNVLRHEFF  430 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~  430 (437)
                      +|||+.++++|||+
T Consensus       252 ~Rp~~~~il~~~~~  265 (265)
T cd08217         252 KRPSTEELLQLPLI  265 (265)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.9e-39  Score=310.82  Aligned_cols=259  Identities=27%  Similarity=0.439  Sum_probs=198.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~  185 (437)
                      ++|+..+.||.|++|.||+|.+..+++.+|+|.+.....  ...++.+|+.++..+     .|+||++++++|.+.  +.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-----KSPYIVKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEEccCCCe
Confidence            468999999999999999999999999999999874322  334566677776665     789999999988653  47


Q ss_pred             EEEEEEeccC-cHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        186 LCLVFELLSY-NLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +++||||+++ +|.+++..  .....+++..+..++.||+.||+|||+  .|++|+||+|+||++  +.++.++|+|||+
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~--~~i~H~dl~~~nil~--~~~~~~~l~dfg~  151 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILL--TRKGQVKLCDFGV  151 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEE--ecCCeEEEeeccc
Confidence            9999999965 78777643  223458999999999999999999995  489999999999999  5677899999999


Q ss_pred             ceecCCcc-ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChhh
Q psy11727        263 SCHVGQTL-YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE-----VDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       263 s~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~-----~~~~~~i~~~~~~p~~~~  336 (437)
                      +....... ....++..|+|||.+.+..++.++|+|||||++|+|++|..||.....     .+....+.   ..+...+
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~  228 (287)
T cd06621         152 SGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV---NMPNPEL  228 (287)
T ss_pred             cccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh---cCCchhh
Confidence            86553322 234578889999999999999999999999999999999999986532     11111111   1000000


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                       ...                                                   .. ....-...+.+||.+||..||.
T Consensus       229 -~~~---------------------------------------------------~~-~~~~~~~~~~~li~~~l~~~p~  255 (287)
T cd06621         229 -KDE---------------------------------------------------PG-NGIKWSEEFKDFIKQCLEKDPT  255 (287)
T ss_pred             -ccC---------------------------------------------------CC-CCCchHHHHHHHHHHHcCCCcc
Confidence             000                                                   00 0000112578999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.|++.||||++.
T Consensus       256 ~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         256 RRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             cCCCHHHHHhCcccccc
Confidence            99999999999999764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=6.2e-40  Score=312.03  Aligned_cols=246  Identities=19%  Similarity=0.265  Sum_probs=192.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.+.||+|+||.||+|...   ..+..||+|.++.....  ...+..|+.++..+     .||||+++++++...
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   78 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-----DHSNIVRLEGVITRG   78 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEecC
Confidence            357999999999999999999765   45678999998754221  22344566555544     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ++.++||||+++ +|.+++.... ..+++..++.++.||+.||+|||+  .|++||||||+|||+  +.++.++++|||.
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~--~~iiH~dikp~nili--~~~~~~~l~dfg~  153 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSE--MGYVHKGLAAHKVLV--NSDLVCKISGFRR  153 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCEeeccccHhhEEE--cCCCcEEECCCcc
Confidence            999999999976 6777776543 468999999999999999999995  489999999999999  6788899999998


Q ss_pred             ceecCCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      +.......    ....++..|+|||++.+..++.++|||||||++||+++ |.+||.+.+..+....+.+....|...  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--  231 (266)
T cd05064         154 LQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPR--  231 (266)
T ss_pred             cccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCC--
Confidence            76542221    11234568999999999999999999999999999775 999999888776666553321111100  


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                                                  .-...+.+++.+||+.+|.+
T Consensus       232 ------------------------------------------------------------~~~~~~~~li~~c~~~~p~~  251 (266)
T cd05064         232 ------------------------------------------------------------NCPNLLHQLMLDCWQKERGE  251 (266)
T ss_pred             ------------------------------------------------------------CCCHHHHHHHHHHcCCCchh
Confidence                                                                        00015789999999999999


Q ss_pred             CCCHHHHhc
Q psy11727        418 RISPTNVLR  426 (437)
Q Consensus       418 R~t~~e~l~  426 (437)
                      |||++++++
T Consensus       252 RP~~~~i~~  260 (266)
T cd05064         252 RPRFSQIHS  260 (266)
T ss_pred             CCCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-39  Score=311.77  Aligned_cols=255  Identities=25%  Similarity=0.448  Sum_probs=203.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....  .....+..|+.+++.+..  ..|+|++++++++......|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            4788899999999999999999999999999986432  223456778888888754  368999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+.+ +|.+++...   .+++..+..++.|++.||.|||+  .||+|+||+|+||++  +.++.++|+|||++....
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~p~ni~i--~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK--VGVIHRDIKAANILV--TNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHHEEE--cCCCCEEEccCCceeecC
Confidence            9999966 788877553   58999999999999999999995  589999999999999  668889999999987664


Q ss_pred             Cc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   .....|+..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.........+..  ..++. +       
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~--~~~~~-~-------  222 (277)
T cd06917         153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK--SKPPR-L-------  222 (277)
T ss_pred             CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc--CCCCC-C-------
Confidence            32   223468889999999875 4578999999999999999999999987654322211100  00000 0       


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               +.                          ......+.+|+.+||+.||.+|||+.+
T Consensus       223 -------------------------~~--------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~  251 (277)
T cd06917         223 -------------------------ED--------------------------NGYSKLLREFVAACLDEEPKERLSAEE  251 (277)
T ss_pred             -------------------------Cc--------------------------ccCCHHHHHHHHHHcCCCcccCcCHHH
Confidence                                     00                          000125789999999999999999999


Q ss_pred             HhcCCCcCcCCC
Q psy11727        424 VLRHEFFLKHSV  435 (437)
Q Consensus       424 ~l~Hp~~~~~~~  435 (437)
                      ++.||||++.+.
T Consensus       252 il~~~~~~~~~~  263 (277)
T cd06917         252 LLKSKWIKAHSK  263 (277)
T ss_pred             HhhChHhhcccc
Confidence            999999988664

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.4e-40  Score=318.42  Aligned_cols=254  Identities=25%  Similarity=0.403  Sum_probs=201.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|.....||+|+||.||++.+..++..||||.+..... ....+..|+.++..+     .|+||+++++.+...++.+
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-----HHENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-----CCCcHHHHHHheecCCeEE
Confidence            3456666789999999999999999999999999864321 223455566666554     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++...   .+++..+..++.||+.||+|||++  ||+||||||+||++  +.++.++|+|||++...
T Consensus        96 lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~--~ivH~dlkp~Nill--~~~~~~kL~dfg~~~~~  168 (292)
T cd06658          96 VVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQ--GVIHRDIKSDSILL--TSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             EEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--CEeecCCCHHHEEE--cCCCCEEEccCcchhhc
Confidence            99999976 677776543   489999999999999999999964  89999999999999  66788999999998654


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||++.+..++.++|+||||+++|||++|..||.+.+....+..+..........        
T Consensus       169 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------  240 (292)
T cd06658         169 SKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKD--------  240 (292)
T ss_pred             ccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcccc--------
Confidence            322   223568889999999998899999999999999999999999998877655544443211100000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                 .                         ......+.+||.+||..||.+|||+++
T Consensus       241 ---------------------------~-------------------------~~~~~~~~~li~~~l~~~P~~Rpt~~~  268 (292)
T cd06658         241 ---------------------------S-------------------------HKVSSVLRGFLDLMLVREPSQRATAQE  268 (292)
T ss_pred             ---------------------------c-------------------------cccCHHHHHHHHHHccCChhHCcCHHH
Confidence                                       0                         000115789999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +++||||....
T Consensus       269 il~~~~~~~~~  279 (292)
T cd06658         269 LLQHPFLKLAG  279 (292)
T ss_pred             HhhChhhhccC
Confidence            99999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.2e-39  Score=309.39  Aligned_cols=246  Identities=23%  Similarity=0.349  Sum_probs=200.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|++.........+..|+.+++.+     .|+||+++++++...+.+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-----CCCChhheEEEEcCCCCcEEE
Confidence            468999999999999999999999999999999875544445667788887776     689999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.......+++..++.++.|++.||+|||+  .|++||||||+||++  ++++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~nil~--~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLV--GENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEE--cCCCcEEeCCCcccccccc
Confidence            999965 89988876555568999999999999999999995  489999999999999  6788899999999876644


Q ss_pred             cccc----ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLYQ----YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~~----~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....    ..++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+......+.          
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------  226 (263)
T cd05052         157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMER----------  226 (263)
T ss_pred             ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------
Confidence            3221    123457999999999999999999999999999998 9999998776555444422110000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               |                           ......+.+||.+||+.||.+|||+.+
T Consensus       227 -------------------------~---------------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~  254 (263)
T cd05052         227 -------------------------P---------------------------EGCPPKVYELMRACWQWNPSDRPSFAE  254 (263)
T ss_pred             -------------------------C---------------------------CCCCHHHHHHHHHHccCCcccCCCHHH
Confidence                                     0                           000125789999999999999999999


Q ss_pred             Hhc
Q psy11727        424 VLR  426 (437)
Q Consensus       424 ~l~  426 (437)
                      +++
T Consensus       255 l~~  257 (263)
T cd05052         255 IHQ  257 (263)
T ss_pred             HHH
Confidence            975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0669|consensus

Probab=100.00  E-value=6.1e-42  Score=305.09  Aligned_cols=284  Identities=29%  Similarity=0.471  Sum_probs=227.3

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecC---CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--  182 (437)
                      ..+.|+-..+||+|.||.||+|+.+.+++.||+|++-.   +..+.....+|+.+++.+     .|+|++.+++.|..  
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-----kHenv~nliEic~tk~   89 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKA   89 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-----cchhHHHHHHHHhhcc
Confidence            35678888999999999999999999999999987643   455667788899999988     67788888877753  


Q ss_pred             ------CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        183 ------KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       183 ------~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                            ...+|+||.+|..+|..++.+.. ..++...+.+++.++..+|.|+|..  .|+|||+||+|+||  +++|.+|
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~--kilHRDmKaaNvLI--t~dgilk  164 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN--KILHRDMKAANVLI--TKDGILK  164 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh--hHHhhcccHhhEEE--cCCceEE
Confidence                  24699999999999999887654 5699999999999999999999954  69999999999999  7899999


Q ss_pred             EEeCCCceecCCc-------cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        257 IIDFGSSCHVGQT-------LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       257 L~DFG~s~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      |+|||+++.++..       .+..+-|..|++||.+.|. .|+++.|+|.-|||+.||.||.|.|.+.++..++..|...
T Consensus       165 lADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L  244 (376)
T KOG0669|consen  165 LADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL  244 (376)
T ss_pred             eeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH
Confidence            9999999655322       1223558999999999985 6999999999999999999999999999999999999999


Q ss_pred             hCCCChhhhccCCccchhhc----ccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFD----RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      .|...++.|++......+-.    .++.+.+                +.+.+++.     |.       +.    .....
T Consensus       245 cGs~tkevWP~~d~lpL~~sie~ePl~~~~~----------------rkv~n~~k-----p~-------~k----d~~a~  292 (376)
T KOG0669|consen  245 CGSITKEVWPNVDNLPLYQSIELEPLPKGQK----------------RKVKNRLK-----PY-------VK----DDEAL  292 (376)
T ss_pred             hccCCcccCCCcccchHHHhccCCCCCcchh----------------hhhhhhcc-----cc-------cC----ChhHH
Confidence            99888888877655432211    0111111                11111111     00       00    11457


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      ||+.+||.+||.+|+++++||+|.||.+-
T Consensus       293 dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  293 DLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             HHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            99999999999999999999999999753

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.7e-39  Score=306.18  Aligned_cols=249  Identities=27%  Similarity=0.459  Sum_probs=196.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc------cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+.....      ....+..|+.+++.+     .|+||+++++++.+.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-----LHERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-----CCCCeeeEEeEeccC
Confidence            468999999999999999999999999999998853211      123455677777766     789999999998763


Q ss_pred             --CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 --NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 --~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                        ..+++||||+++ +|.+++....  .+++..+..++.|++.||+|||++  |++|+||||+||++  +.++.++|+||
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~--~i~H~dl~p~nil~--~~~~~~~l~Df  150 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSN--MIVHRDIKGANILR--DSVGNVKLGDF  150 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEe--cCCCCEEECcC
Confidence              578999999965 7888887543  478999999999999999999954  89999999999999  67888999999


Q ss_pred             CCceecCC------ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        261 GSSCHVGQ------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       261 G~s~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |++.....      ......++..|+|||++.+..++.++|+|||||++|+|++|++||...........+.   ..+..
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~  227 (265)
T cd06652         151 GASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQPTN  227 (265)
T ss_pred             ccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCCCC
Confidence            99875432      1223467889999999998889999999999999999999999998765443333221   11110


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ..                                                          ........+.++|++|+ .+
T Consensus       228 ~~----------------------------------------------------------~~~~~~~~~~~~i~~~l-~~  248 (265)
T cd06652         228 PV----------------------------------------------------------LPPHVSDHCRDFLKRIF-VE  248 (265)
T ss_pred             CC----------------------------------------------------------CchhhCHHHHHHHHHHh-cC
Confidence            00                                                          00011125789999999 49


Q ss_pred             CCCCCCHHHHhcCCCcC
Q psy11727        415 PKKRISPTNVLRHEFFL  431 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~  431 (437)
                      |.+|||++++++|||+.
T Consensus       249 p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         249 AKLRPSADELLRHTFVH  265 (265)
T ss_pred             hhhCCCHHHHhcCcccC
Confidence            99999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=8e-40  Score=316.58  Aligned_cols=251  Identities=26%  Similarity=0.462  Sum_probs=199.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      |.....||+|+||.||+|.+..++..||+|.+..... ....+..|+.++..+     .||||+++++.+...+..++||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHQNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-----CCCchhhhhhheeeCCeEEEEE
Confidence            4455678999999999999999999999999864322 223444566555544     7899999999999999999999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||+++ +|.+++...   .+++..++.++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||++......
T Consensus        98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dl~p~Nill--~~~~~~kL~dfg~~~~~~~~  170 (297)
T cd06659          98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHS--QGVIHRDIKSDSILL--TLDGRVKLSDFGFCAQISKD  170 (297)
T ss_pred             ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHeEE--ccCCcEEEeechhHhhcccc
Confidence            99976 677766543   48999999999999999999995  489999999999999  67889999999998654322


Q ss_pred             ---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        270 ---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       270 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                         .....++..|+|||++.+..++.++|+|||||++|||++|++||...+..+.+..+...   ++.... .       
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~-~-------  239 (297)
T cd06659         171 VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPPKLK-N-------  239 (297)
T ss_pred             cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CCCCcc-c-------
Confidence               23456889999999999989999999999999999999999999887766555443210   100000 0       


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                                                                       .......+.+||.+||+.||.+|||+.++++
T Consensus       240 -------------------------------------------------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         240 -------------------------------------------------AHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             -------------------------------------------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                                                             0000115789999999999999999999999


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||.+..
T Consensus       271 ~~~~~~~~  278 (297)
T cd06659         271 HPFLLQTG  278 (297)
T ss_pred             ChhhccCC
Confidence            99998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2e-39  Score=305.94  Aligned_cols=248  Identities=29%  Similarity=0.476  Sum_probs=199.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +|+..+.||+|+||+||+|.+..++..||+|.+....      .....+..|+.+++.+     .|+||+++++++...+
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-----QHPNIVQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-----CCCCchheeeeEecCC
Confidence            4778899999999999999999899999999986432      1234455677666655     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+++||||+++ +|.+++...  ..+++..+..++.||+.||+|||+  .|++|+||+|+||++  +.++.+||+|||++
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~~~ni~~--~~~~~~kl~d~~~~  149 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHD--RNTVHRDIKGANILV--DTNGVVKLADFGMA  149 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEE--CCCCCEEEccCccc
Confidence            99999999976 888888764  358899999999999999999995  489999999999999  67888999999998


Q ss_pred             eecCCc--cccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQT--LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ......  .....++..|+|||.+.... ++.++|+|||||++|+|++|++||...........+......+.       
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------  222 (258)
T cd06632         150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP-------  222 (258)
T ss_pred             eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCC-------
Confidence            765432  23456788999999998776 89999999999999999999999987664443333321110000       


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                            .+......+.+||++||+.||.+|||
T Consensus       223 ------------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~  248 (258)
T cd06632         223 ------------------------------------------------------IPDHLSDEAKDFILKCLQRDPSLRPT  248 (258)
T ss_pred             ------------------------------------------------------cCCCcCHHHHHHHHHHhhcCcccCcC
Confidence                                                                  00001125789999999999999999


Q ss_pred             HHHHhcCCCc
Q psy11727        421 PTNVLRHEFF  430 (437)
Q Consensus       421 ~~e~l~Hp~~  430 (437)
                      +.+++.|||+
T Consensus       249 ~~~~l~~~~~  258 (258)
T cd06632         249 AAELLEHPFV  258 (258)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.8e-40  Score=316.00  Aligned_cols=251  Identities=28%  Similarity=0.465  Sum_probs=199.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +.|+..+.||+|+||.||+|.+..++..||+|.+....  .....+..|+.++..+     .|+||+++++++...+.++
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYITRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-----CCCccHhhhcccccCCceE
Confidence            45778899999999999999999999999999986332  2223455666666654     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++..   ..+++..++.++.||+.||.|||+  .|++|+||+|+||++  ++++.++|+|||++...
T Consensus        79 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~ivH~dl~p~ni~i--~~~~~~~l~dfg~~~~~  151 (277)
T cd06642          79 IIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHS--ERKIHRDIKAANVLL--SEQGDVKLADFGVAGQL  151 (277)
T ss_pred             EEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhc--CCeeccCCChheEEE--eCCCCEEEccccccccc
Confidence            99999976 78777754   348999999999999999999995  489999999999999  56788999999998765


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....   ....++..|+|||++.+..++.++|+|||||++|||++|.+||...........+...  .++.         
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~---------  220 (277)
T cd06642         152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--SPPT---------  220 (277)
T ss_pred             cCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--CCCC---------
Confidence            4322   2345788899999999989999999999999999999999999866544333221110  0000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                         ........+.+||.+||..+|.+|||+.+
T Consensus       221 ---------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (277)
T cd06642         221 ---------------------------------------------------LEGQYSKPFKEFVEACLNKDPRFRPTAKE  249 (277)
T ss_pred             ---------------------------------------------------CCcccCHHHHHHHHHHccCCcccCcCHHH
Confidence                                                               00001125789999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +++||||....
T Consensus       250 il~~~~~~~~~  260 (277)
T cd06642         250 LLKHKFITRYT  260 (277)
T ss_pred             HHHhHHHHHHh
Confidence            99999997643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.5e-39  Score=306.83  Aligned_cols=249  Identities=30%  Similarity=0.445  Sum_probs=200.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||+|.+..++..||+|.+....   ........|+.+++.+     .|+||+++++.+...+..+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-----KHPNIVTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-----CCCChhhhhheeccCCeEE
Confidence            5889999999999999999999999999999986431   2234555677777665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEEEEeCCCcee
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ikL~DFG~s~~  265 (437)
                      +|+||+++ +|.+++.......+++..+..++.|++.||+|||+  .+++|+||||+||+++  ++ ..++|+|||.+..
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~  151 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD--RKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQ  151 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEc--CCCCeEEecccccchh
Confidence            99999965 89888876554568999999999999999999995  4899999999999994  44 3579999999876


Q ss_pred             cCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .....   ....|+..|+|||++.+..++.++|+||||+++++|++|..||...+..+....+....             
T Consensus       152 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------  218 (257)
T cd08225         152 LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-------------  218 (257)
T ss_pred             ccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-------------
Confidence            54322   23457889999999988889999999999999999999999998776554443332110             


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                          +....                                             ......+.++|.+||..+|++|||+.
T Consensus       219 ----~~~~~---------------------------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~  249 (257)
T cd08225         219 ----FAPIS---------------------------------------------PNFSRDLRSLISQLFKVSPRDRPSIT  249 (257)
T ss_pred             ----CCCCC---------------------------------------------CCCCHHHHHHHHHHhccChhhCcCHH
Confidence                00000                                             00012578999999999999999999


Q ss_pred             HHhcCCCc
Q psy11727        423 NVLRHEFF  430 (437)
Q Consensus       423 e~l~Hp~~  430 (437)
                      ++++||||
T Consensus       250 ~ll~~~~~  257 (257)
T cd08225         250 SILKRPFL  257 (257)
T ss_pred             HHhhCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2.3e-39  Score=314.17  Aligned_cols=209  Identities=23%  Similarity=0.326  Sum_probs=167.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC----------------CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE----------------EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHS  170 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h  170 (437)
                      .++|.+.+.||+|+||.||+|.+..                ++..||+|++.....  ....+..|+.++..+     .|
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h   78 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-----KD   78 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-----CC
Confidence            4689999999999999999997532                345799999875321  223466777777765     78


Q ss_pred             CcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy11727        171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF-----------------HGVSLNLTKKFAQQLCCALAFLSSPE  232 (437)
Q Consensus       171 ~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~-----------------~~ls~~~~~~i~~qi~~aL~~LH~~~  232 (437)
                      +||+++++++.+.+..++||||+++ +|.+++.....                 ..+++..+..++.||+.||.|||++ 
T Consensus        79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-  157 (304)
T cd05096          79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-  157 (304)
T ss_pred             CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence            9999999999999999999999965 88888754321                 2367888999999999999999964 


Q ss_pred             CCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHH
Q psy11727        233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELH  307 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell  307 (437)
                       ||+||||||+|||+  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||+
T Consensus       158 -~ivH~dlkp~Nill--~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~  234 (304)
T cd05096         158 -NFVHRDLATRNCLV--GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL  234 (304)
T ss_pred             -CccccCcchhheEE--cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence             89999999999999  677889999999997653321     1233467899999999889999999999999999998


Q ss_pred             h--CCCCCCCCCHHHHHHHHH
Q psy11727        308 T--GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       308 t--g~~pf~~~~~~~~~~~i~  326 (437)
                      +  +..||.+.+..+....+.
T Consensus       235 ~~~~~~p~~~~~~~~~~~~~~  255 (304)
T cd05096         235 MLCKEQPYGELTDEQVIENAG  255 (304)
T ss_pred             HccCCCCCCcCCHHHHHHHHH
Confidence            7  568888776655555443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0608|consensus

Probab=100.00  E-value=5.2e-41  Score=330.92  Aligned_cols=255  Identities=24%  Similarity=0.403  Sum_probs=201.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .-|..++.||-|+||+|.++....|...||+|.+++....    ...+..|..||...     ++++||+|+..|++++.
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-----Dn~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDN  703 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-----CCcceEEEEEEeccCCc
Confidence            4588899999999999999999999999999999854322    22334466666544     78899999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||+|.+| ++..+|...+  -|.++.++.++.++.+|+++.|  ++|+|||||||+||||  |.+|+|||+|||+++
T Consensus       704 LYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVH--kmGFIHRDiKPDNILI--DrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVH--KMGFIHRDIKPDNILI--DRDGHIKLTDFGLCT  777 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHH--hccceecccCccceEE--ccCCceeeeeccccc
Confidence            9999999965 7888776653  3899999999999999999999  7899999999999999  889999999999975


Q ss_pred             ecCCc---------------------------------------------cccccccccccChhhhcCCCCCCcchHHHH
Q psy11727        265 HVGQT---------------------------------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSL  299 (437)
Q Consensus       265 ~~~~~---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  299 (437)
                      -+...                                             ....+||+.|+|||++...+|+..+|+||.
T Consensus       778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~  857 (1034)
T KOG0608|consen  778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV  857 (1034)
T ss_pred             cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence            33210                                             123478999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhc
Q psy11727        300 GCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILG  379 (437)
Q Consensus       300 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (437)
                      |||||||+.|++||......++..+++.                                           |+..-+|.-
T Consensus       858 gvil~em~~g~~pf~~~tp~~tq~kv~n-------------------------------------------w~~~l~~~~  894 (1034)
T KOG0608|consen  858 GVILYEMLVGQPPFLADTPGETQYKVIN-------------------------------------------WRNFLHIPY  894 (1034)
T ss_pred             hHHHHHHhhCCCCccCCCCCcceeeeee-------------------------------------------hhhcccccc
Confidence            9999999999999998877655444432                                           111111100


Q ss_pred             cCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---HHHHhcCCCcCcCCC
Q psy11727        380 VDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---PTNVLRHEFFLKHSV  435 (437)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---~~e~l~Hp~~~~~~~  435 (437)
                      +.                ....++.+||.++ ..+++.|..   ++|+-.||||+..+.
T Consensus       895 ~~----------------~ls~e~~~li~kL-c~sad~RLGkng~d~vKaHpfFkgIDf  936 (1034)
T KOG0608|consen  895 QG----------------NLSKEALDLIQKL-CCSADSRLGKNGADQVKAHPFFKGIDF  936 (1034)
T ss_pred             cc----------------ccCHHHHHHHHHH-hcChhhhhcccchhhhhcCccccccch
Confidence            00                0012568888885 457888885   788999999998754

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.3e-39  Score=310.99  Aligned_cols=248  Identities=34%  Similarity=0.529  Sum_probs=202.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|.+.+.||+|+||.||+|.+..++..||+|++.....    .......|..++..+.    .|+||+++++++.+.+.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~   76 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN----GHPGIIKLYYTFQDEEN   76 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc----cCCCchhHHHHhcCCce
Confidence            479999999999999999999999999999999864221    1234455666665552    48999999999999999


Q ss_pred             EEEEEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .++|||++ +++|.+++....  .+++..++.++.|++.||.+||+  .|++|+||+|+||++  +.++.++|+|||++.
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~--~~~~H~dl~~~ni~i--~~~~~~~l~df~~~~  150 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHS--KGIIHRDLKPENILL--DKDMHIKITDFGTAK  150 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEE--CCCCCEEecCCcccc
Confidence            99999999 558999887653  58999999999999999999995  489999999999999  667889999999987


Q ss_pred             ecCCcc-----------------------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy11727        265 HVGQTL-----------------------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ  321 (437)
Q Consensus       265 ~~~~~~-----------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~  321 (437)
                      ......                       ....++..|+|||++.+..++.++|+||||++++++++|++||...+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  230 (280)
T cd05581         151 VLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT  230 (280)
T ss_pred             ccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            653322                       123567889999999988899999999999999999999999998876655


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ++.+.......|..                                                               ...
T Consensus       231 ~~~~~~~~~~~~~~---------------------------------------------------------------~~~  247 (280)
T cd05581         231 FQKILKLEYSFPPN---------------------------------------------------------------FPP  247 (280)
T ss_pred             HHHHHhcCCCCCCc---------------------------------------------------------------cCH
Confidence            55554321111100                                                               012


Q ss_pred             HHHHHHHHccccCCCCCCCH----HHHhcCCCc
Q psy11727        402 KFKDLILRMLTYDPKKRISP----TNVLRHEFF  430 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~----~e~l~Hp~~  430 (437)
                      .+.+||++||+.||.+|||+    +++++||||
T Consensus       248 ~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         248 DAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            57899999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0584|consensus

Probab=100.00  E-value=1.4e-40  Score=329.88  Aligned_cols=253  Identities=26%  Similarity=0.429  Sum_probs=208.4

Q ss_pred             cCee-eeceecccCceEEEEEEEcCCCeEEEEEEec-----CCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYE-IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~-i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~-----~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|. ...+||+|+|-+||+|.|..+|..||.-.++     +......++..|+.+|+.|     .|+|||+++++|.+.
T Consensus        39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-----~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-----KHPNIIRFYDSWVDT  113 (632)
T ss_pred             CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-----CCCceeeeeeheecC
Confidence            3443 3568999999999999999999999875543     2233346777788888776     789999999999876


Q ss_pred             C--EEEEEEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 N--HLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 ~--~~~lV~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      .  ...+|+|++ +|+|..++++.+  .++...++.|++||+.||.|||+++..|||||||-+||||+ ...|.|||+|+
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin-G~~G~VKIGDL  190 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN-GNLGEVKIGDL  190 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc-CCcCceeecch
Confidence            5  588999999 679999998864  48999999999999999999999999999999999999995 56789999999


Q ss_pred             CCceecCCcc-ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQTL-YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |+|+...... ...+|||.|||||++. ..|+..+||||||++|.||+|+..||+. .+...++.++..  |..|..+. 
T Consensus       191 GLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~sl~-  266 (632)
T KOG0584|consen  191 GLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAALS-  266 (632)
T ss_pred             hHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHHhh-
Confidence            9998876544 3469999999999998 5899999999999999999999999964 556666666654  22332211 


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                ++.                                                +.+.++||.+||.. ..+|
T Consensus       267 ----------kV~------------------------------------------------dPevr~fIekCl~~-~~~R  287 (632)
T KOG0584|consen  267 ----------KVK------------------------------------------------DPEVREFIEKCLAT-KSER  287 (632)
T ss_pred             ----------ccC------------------------------------------------CHHHHHHHHHHhcC-chhc
Confidence                      110                                                12679999999999 9999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      +|+.|+|+||||+.-
T Consensus       288 ~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  288 LSAKELLKDPFFDED  302 (632)
T ss_pred             cCHHHHhhChhhccc
Confidence            999999999999874

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=7.8e-39  Score=299.74  Aligned_cols=249  Identities=35%  Similarity=0.538  Sum_probs=203.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +|.+.+.||+|++|.||++.+..++..+++|++..... ....+..|+.++..+     .|++++++.+++...+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-----KHPNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCCeEEEE
Confidence            48889999999999999999998999999999975433 345666777777766     589999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      +||+++ +|.+++.... ..+++..+..++.|++.||++||.  .|++||||+|+||++  +.++.++|+|||.+.....
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~--~~i~h~dl~p~ni~i--~~~~~~~l~d~~~~~~~~~  150 (253)
T cd05122          76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS--NGIIHRDIKAANILL--TSDGEVKLIDFGLSAQLSD  150 (253)
T ss_pred             EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc--CCEecCCCCHHHEEE--ccCCeEEEeeccccccccc
Confidence            999985 8888877653 468999999999999999999996  589999999999999  6678899999999977655


Q ss_pred             cc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        269 TL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       269 ~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                      ..  ....++..|+|||++.+..++.++|+||||+++|+|++|++||...+.......+..  ...+..           
T Consensus       151 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~-----------  217 (253)
T cd05122         151 TKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGPPGL-----------  217 (253)
T ss_pred             cccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCCCCc-----------
Confidence            43  456788899999999988899999999999999999999999987755444333321  000000           


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                                            +.                         .......+.++|.+||+.||.+|||+.++++
T Consensus       218 ----------------------~~-------------------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         218 ----------------------RN-------------------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             ----------------------Cc-------------------------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                  00                         0000125789999999999999999999999


Q ss_pred             CCC
Q psy11727        427 HEF  429 (437)
Q Consensus       427 Hp~  429 (437)
                      |||
T Consensus       251 ~~~  253 (253)
T cd05122         251 HPF  253 (253)
T ss_pred             CCC
Confidence            999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=4.3e-39  Score=304.83  Aligned_cols=250  Identities=29%  Similarity=0.457  Sum_probs=198.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.++....   ....+..|+.++..+     .|+||+++++.+...+.++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-----KHPNLVKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-----CCCChhheeeeEecCCEEE
Confidence            58999999999999999999998999999999975433   344566677776665     7889999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+||+++ +|.+++....  .+++..+..++.|++.||.|||+  .||+|+||+|+||++  +.++.+||+|||++...
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~~~nil~--~~~~~~kl~d~g~~~~~  149 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHS--HGIVHRDIKPANIFL--DHNGVIKLGDFGCAVKL  149 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEE--CCCCCEEEccccccccc
Confidence            99999965 7888887643  47899999999999999999995  489999999999999  66888999999998765


Q ss_pred             CCccc-------cccccccccChhhhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        267 GQTLY-------QYIQSRYYRSPEVLLGIP---YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       267 ~~~~~-------~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      .....       ...++..|+|||++.+..   ++.++||||||++++++++|+.||............... +.++.  
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~--  226 (264)
T cd06626         150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP--  226 (264)
T ss_pred             CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC--
Confidence            43221       245678899999998766   889999999999999999999999765322221111110 11100  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                     .|..                         ......+.+||.+||+.||.
T Consensus       227 -------------------------------~~~~-------------------------~~~~~~~~~li~~~l~~~p~  250 (264)
T cd06626         227 -------------------------------IPDS-------------------------LQLSPEGKDFLDRCLESDPK  250 (264)
T ss_pred             -------------------------------CCcc-------------------------cccCHHHHHHHHHHccCCcc
Confidence                                           0000                         00012568999999999999


Q ss_pred             CCCCHHHHhcCCCc
Q psy11727        417 KRISPTNVLRHEFF  430 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~  430 (437)
                      +|||+.+++.|||+
T Consensus       251 ~R~~~~~i~~~~~~  264 (264)
T cd06626         251 KRPTASELLQHPFV  264 (264)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=2.3e-39  Score=306.67  Aligned_cols=246  Identities=21%  Similarity=0.314  Sum_probs=199.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||.||+|... ++..||+|.+.........+..|+.++..+     .|+||+++++.+...+..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL-----QHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCcEE
Confidence            467999999999999999999865 456799999875444445667788887766     68999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||++....
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nili--~~~~~~~l~dfg~~~~~~  154 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER--KNYIHRDLRAANVLV--SESLMCKIADFGLARVIE  154 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEe--cCCCcEEECCCccceecC
Confidence            9999964 89998876555568999999999999999999995  489999999999999  678889999999997764


Q ss_pred             Cccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....    ...++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.........+......|..        
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  226 (261)
T cd05072         155 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRM--------  226 (261)
T ss_pred             CCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            3221    2234567999999998889999999999999999998 99999887766655554321111000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                            ......+.+||.+||..||++|||++
T Consensus       227 ------------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~  252 (261)
T cd05072         227 ------------------------------------------------------ENCPDELYDIMKTCWKEKAEERPTFD  252 (261)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHccCCcccCcCHH
Confidence                                                                  00012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       253 ~i~~  256 (261)
T cd05072         253 YLQS  256 (261)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0586|consensus

Probab=100.00  E-value=2.6e-40  Score=327.56  Aligned_cols=251  Identities=29%  Similarity=0.425  Sum_probs=210.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+.|.+.+.||+|.|+.|.+|+...++..||||++.+....   .....+|+.++..+     .|||||+++.+.+....
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-----~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-----NHPNIVKLFSVIETEAT  129 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-----CCcceeeeeeeeeecce
Confidence            56799999999999999999999999999999999754322   22356788888776     78999999999999999


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+||||+. |.+++++.+..  .+.+..++.++.|+..|++|||++  +|||||||++||||  +.+.++||+|||+|.
T Consensus       130 lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k--~ivHrdLk~eNilL--~~~mnikIaDfgfS~  203 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK--NIVHRDLKAENILL--DENMNIKIADFGFST  203 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc--ceeccccchhhccc--ccccceeeeccccce
Confidence            999999995 58999998875  377799999999999999999976  69999999999999  788889999999998


Q ss_pred             ecC--CccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVG--QTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .+.  ....++||++.|.|||++.+..|+ +++|+||+|+++|.|+.|..||.|.+-.+.-.+.+.              
T Consensus       204 ~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~--------------  269 (596)
T KOG0586|consen  204 FFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR--------------  269 (596)
T ss_pred             eecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee--------------
Confidence            774  445689999999999999998876 789999999999999999999998765333222211              


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                            .++++|....                           ..+.+||+++|..+|.+|+++
T Consensus       270 ----------------------gk~rIp~~ms---------------------------~dce~lLrk~lvl~Pskr~~~  300 (596)
T KOG0586|consen  270 ----------------------GKYRIPFYMS---------------------------CDCEDLLRKFLVLNPSKRGPC  300 (596)
T ss_pred             ----------------------eeecccceee---------------------------chhHHHHHHhhccCccccCCH
Confidence                                  1122221111                           157899999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      ++++.|.|....
T Consensus       301 dqim~~~W~n~~  312 (596)
T KOG0586|consen  301 DQIMKDRWRNDL  312 (596)
T ss_pred             HHhhhhcccchh
Confidence            999999998654

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=5.4e-39  Score=307.29  Aligned_cols=250  Identities=27%  Similarity=0.459  Sum_probs=200.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      -|++.+.||.|+||.||+|.+..+++.||+|++.....  ....+..|+.++..+     .|+||+++++++..++++++
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-----CCCCEeEEEEEEEeCCeEEE
Confidence            47788899999999999999998999999999863321  223455566666655     78999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++...   .+++..+..++.|++.++.+||+  .|++|+||+|+||++  +.++.++|+|||++....
T Consensus        80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~Ni~i--~~~~~~~l~dfg~~~~~~  152 (277)
T cd06641          80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLL--SEHGEVKLADFGVAGQLT  152 (277)
T ss_pred             EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHcc--CCeecCCCCHHhEEE--CCCCCEEEeecccceecc
Confidence            9999976 777777643   48999999999999999999995  489999999999999  677889999999986653


Q ss_pred             Cc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..   .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||...+.......+...  .++. .        
T Consensus       153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~-~--------  221 (277)
T cd06641         153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NPPT-L--------  221 (277)
T ss_pred             cchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CCCC-C--------
Confidence            32   12346788899999999888999999999999999999999999876654444333110  0000 0        


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                         .......+.++|.+||..||.+||++.++
T Consensus       222 ---------------------------------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  250 (277)
T cd06641         222 ---------------------------------------------------EGNYSKPLKEFVEACLNKEPSFRPTAKEL  250 (277)
T ss_pred             ---------------------------------------------------CcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence                                                               00001257899999999999999999999


Q ss_pred             hcCCCcCcCC
Q psy11727        425 LRHEFFLKHS  434 (437)
Q Consensus       425 l~Hp~~~~~~  434 (437)
                      ++||||.+..
T Consensus       251 l~~~~~~~~~  260 (277)
T cd06641         251 LKHKFIVRFA  260 (277)
T ss_pred             HhCHHHhhhh
Confidence            9999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.5e-39  Score=309.38  Aligned_cols=253  Identities=26%  Similarity=0.448  Sum_probs=202.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .|...+.||+|++|.||++.+..+++.+|+|.+..... ....+.+|+.+++.+     .|+||+++++++...++.++|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v   94 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVV   94 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEE
Confidence            35556799999999999999999999999998864322 123455666666655     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      +||+.+ +|.+++..   ..+++..+..++.|++.||+|||++  |++||||+|+||++  +.++.++|+|||.+.....
T Consensus        95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648          95 MEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ--GVIHRDIKSDSILL--TSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             EeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCChhhEEE--cCCCcEEEcccccchhhcc
Confidence            999965 88888776   3489999999999999999999964  89999999999999  6788899999998765432


Q ss_pred             c---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 T---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      .   .....|+..|+|||++.+..++.++|+|||||++|+|++|.+||...+.......+...  .++. ...       
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~~~-~~~-------  237 (285)
T cd06648         168 EVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LPPK-LKN-------  237 (285)
T ss_pred             CCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc--CCCC-Ccc-------
Confidence            2   12346888999999999888999999999999999999999999887766555544321  1100 000       


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                                                        .......+.+||++||+.||.+|||+.+++
T Consensus       238 --------------------------------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il  267 (285)
T cd06648         238 --------------------------------------------------LHKVSPRLRSFLDRMLVRDPAQRATAAELL  267 (285)
T ss_pred             --------------------------------------------------cccCCHHHHHHHHHHcccChhhCcCHHHHc
Confidence                                                              000012578999999999999999999999


Q ss_pred             cCCCcCcCCC
Q psy11727        426 RHEFFLKHSV  435 (437)
Q Consensus       426 ~Hp~~~~~~~  435 (437)
                      +||||++...
T Consensus       268 ~~~~~~~~~~  277 (285)
T cd06648         268 NHPFLAKAGP  277 (285)
T ss_pred             cCcccccCCC
Confidence            9999987653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.3e-39  Score=325.31  Aligned_cols=204  Identities=26%  Similarity=0.416  Sum_probs=165.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-----CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-----KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|++..+     +..||+|+++....  ....+..|+.+++.+.    .|+|||+++++|.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~----~h~nIv~~~~~~~  112 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG----QHKNIVNLLGACT  112 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc----cCCceeeEeeEec
Confidence            35799999999999999999986443     35799999974321  2234566888777663    6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC-------------------------------------------------------
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN-------------------------------------------------------  205 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~-------------------------------------------------------  205 (437)
                      ..+.+++||||+++ +|.+++....                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            99999999999965 8888875421                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccc-
Q psy11727        206 -------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-  271 (437)
Q Consensus       206 -------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~-  271 (437)
                                   ...+++..++.++.||+.||+|||++  ||+||||||+|||+  ++++.+||+|||++........ 
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--giiHrDLkp~Nil~--~~~~~~kL~DfGla~~~~~~~~~  268 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK--NCIHRDVAARNVLL--TDGRVAKICDFGLARDIMNDSNY  268 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC--CEEeccCchheEEE--eCCCeEEEeeceeeeeccCCcce
Confidence                         12478889999999999999999964  89999999999999  5678899999999876533211 


Q ss_pred             ----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy11727        272 ----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVD  320 (437)
Q Consensus       272 ----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~  320 (437)
                          ...++..|+|||++.+..++.++|||||||++|+|++ |++||.......
T Consensus       269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~  322 (374)
T cd05106         269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS  322 (374)
T ss_pred             eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence                1223567999999999899999999999999999997 999998765443

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0603|consensus

Probab=100.00  E-value=3.2e-40  Score=328.47  Aligned_cols=247  Identities=29%  Similarity=0.401  Sum_probs=205.4

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.+.|.+...+|.|+|+.|-.|.+..+++..++|++....   .....|+.++....    .|+||+++.+.+.+..+.
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~----~h~niv~~~~v~~~~~~~  391 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR----DHPNIVKSHDVYEDGKEI  391 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc----CCCcceeecceecCCcee
Confidence            46788999999999999999999999999999999997542   33445665655553    789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++|||.+.| .+.+.+....   .....+..|+.+|+.|+.|||.+  |+|||||||+|||+. +..++++|+|||.++.
T Consensus       392 ~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~--gvvhRDLkp~NIL~~-~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQ--GVVHRDLKPGNILLD-GSAGHLRLTYFGFWSE  465 (612)
T ss_pred             eeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhc--CeeecCCChhheeec-CCCCcEEEEEechhhh
Confidence            999999966 5666666554   22377788999999999999974  899999999999995 4678899999999988


Q ss_pred             cCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        266 VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       266 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      ......+.+-|..|.|||++...+|+.++|+||||++||+|++|+.||......   ..|....+.|+..          
T Consensus       466 ~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s----------  532 (612)
T KOG0603|consen  466 LERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS----------  532 (612)
T ss_pred             CchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc----------
Confidence            877766677889999999999999999999999999999999999999876655   3333333333211          


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                                                         ......++|||++||++||.+|+|+.+++
T Consensus       533 ---------------------------------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~  561 (612)
T KOG0603|consen  533 ---------------------------------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIG  561 (612)
T ss_pred             ---------------------------------------------------cccCHHHHHHHHHhccCChhhCcChhhhc
Confidence                                                               00111579999999999999999999999


Q ss_pred             cCCCc
Q psy11727        426 RHEFF  430 (437)
Q Consensus       426 ~Hp~~  430 (437)
                      .||||
T Consensus       562 ~h~w~  566 (612)
T KOG0603|consen  562 AHPWF  566 (612)
T ss_pred             cCcch
Confidence            99999

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3e-39  Score=311.90  Aligned_cols=254  Identities=26%  Similarity=0.408  Sum_probs=200.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|.+.+.||+|+||.||++.+..++..||+|.+.... .....+..|+.++..     +.||||+++++.+...+..+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~-----l~hp~i~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE-----NKHPNIVNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhh-----cCCCCeeehhheeeeCCcEE
Confidence            478999999999999999999998899999999986332 222344556655554     47899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+||+++ +|.+++...   .+++..+..++.|++.||+|||+  .|++|+||||+||++  +.++.++|+|||++...
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~--~gi~H~dL~p~Nili--~~~~~~kL~dfg~~~~~  165 (293)
T cd06647          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh--CCEeeccCCHHHEEE--cCCCCEEEccCcceecc
Confidence            99999965 888887654   37899999999999999999995  489999999999999  66788999999988655


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||++.+..++.++|+|||||++|++++|++||...+....+..+.. .+.+.          
T Consensus       166 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~----------  234 (293)
T cd06647         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE----------  234 (293)
T ss_pred             cccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCC----------
Confidence            322   2234678889999999988899999999999999999999999987655333222110 00000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                         +                     +                         .+......+.+||++||..||.+|||+.+
T Consensus       235 ---~---------------------~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~  265 (293)
T cd06647         235 ---L---------------------Q-------------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKE  265 (293)
T ss_pred             ---C---------------------C-------------------------CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence               0                     0                         00001125789999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      ++.||||+...
T Consensus       266 il~h~~~~~~~  276 (293)
T cd06647         266 LLQHPFLKIAK  276 (293)
T ss_pred             HhcCHHHhcCc
Confidence            99999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=2.3e-39  Score=323.59  Aligned_cols=250  Identities=25%  Similarity=0.351  Sum_probs=192.7

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|..     ..++..||||+++....  ....+..|+.++..+.    .||||++++++|.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~----~HpnIv~l~~~~~  109 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHINIVNLLGACT  109 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc----CCcceeeeeeeec
Confidence            34799999999999999999964     35677899999864321  2234567888877763    6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC-------------------------------------------------------
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN-------------------------------------------------------  205 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~-------------------------------------------------------  205 (437)
                      ..+..++||||+++ +|.+++....                                                       
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            99999999999965 8888886432                                                       


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        206 ------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       206 ------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                                        ...+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~Nill--~~~~~~kl~DfG~a~~~~  265 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK--NCIHRDLAARNILL--THGRITKICDFGLARDIR  265 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCchhhEEE--ECCCcEEEecCccceecc
Confidence                              12478888999999999999999964  89999999999999  567789999999997654


Q ss_pred             Cccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        268 QTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       268 ~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....     ...++..|+|||++.+..++.++|||||||++|||++ |.+||.+........+.+.....+.        
T Consensus       266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------  337 (375)
T cd05104         266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--------  337 (375)
T ss_pred             CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--------
Confidence            3221     1223567999999999999999999999999999998 8999987654433333222100000        


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                .|                        .   .....+.+||.+||+.||.+|||+
T Consensus       338 --------------------------~~------------------------~---~~~~~l~~li~~cl~~dP~~RPs~  364 (375)
T cd05104         338 --------------------------SP------------------------E---CAPSEMYDIMKSCWDADPLKRPTF  364 (375)
T ss_pred             --------------------------CC------------------------C---CCCHHHHHHHHHHccCChhHCcCH
Confidence                                      00                        0   001257899999999999999999


Q ss_pred             HHHhcC
Q psy11727        422 TNVLRH  427 (437)
Q Consensus       422 ~e~l~H  427 (437)
                      .|+++.
T Consensus       365 ~eil~~  370 (375)
T cd05104         365 KQIVQL  370 (375)
T ss_pred             HHHHHH
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.3e-39  Score=310.40  Aligned_cols=248  Identities=23%  Similarity=0.331  Sum_probs=197.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC-----eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK-----CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|.....+     ..||+|.++....  ....+..|+.++..+     .|+||+++++++.
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~   78 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-----QHPNIVCLLGVCT   78 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-----CCcccceEEEEEc
Confidence            357899999999999999999876555     6899999864321  223456677777665     7899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      ..+..+++|||+++ +|.+++.....              ..+++..+..++.||+.||+|||++  |++||||||+||+
T Consensus        79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~--~i~H~dlkp~Nil  156 (283)
T cd05048          79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH--HFVHRDLAARNCL  156 (283)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC--CeeccccccceEE
Confidence            99999999999965 89988875421              4578899999999999999999964  8999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVD  320 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~  320 (437)
                      +  ++++.++|+|||++......     .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus       157 ~--~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~  234 (283)
T cd05048         157 V--GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE  234 (283)
T ss_pred             E--cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            9  66788999999998765322     123345778999999998899999999999999999998 999999887766


Q ss_pred             HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       321 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      ....+......+.                                   |                           ....
T Consensus       235 ~~~~i~~~~~~~~-----------------------------------~---------------------------~~~~  252 (283)
T cd05048         235 VIEMIRSRQLLPC-----------------------------------P---------------------------EDCP  252 (283)
T ss_pred             HHHHHHcCCcCCC-----------------------------------c---------------------------ccCC
Confidence            6555433111000                                   0                           0001


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ..+.+|+.+||+.||.+|||++++++|
T Consensus       253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         253 ARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            257899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.6e-39  Score=304.64  Aligned_cols=244  Identities=25%  Similarity=0.336  Sum_probs=197.2

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|++.+.||+|+||.||++.... +..+|+|.+.........+..|+.+++.+     .||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKL-----SHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHC-----CCCCceeEEEEEccCCCEEEE
Confidence            468899999999999999998754 55799999875544445677788888876     689999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.... ..+++..+..++.|++.||+|||+  .||+||||||+||++  ++++.+||+|||.+.....
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i--~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLER--NSFIHRDLAARNCLV--SSTGVVKVSDFGMTRYVLD  152 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcceEEE--cCCCeEEECCCCCccccCC
Confidence            999964 7888887543 358999999999999999999995  489999999999999  6788899999999876532


Q ss_pred             ccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...    ...++..|+|||++.+..++.++|+||||+++|+|++ |++||...+..+....+......+.          
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----------  222 (256)
T cd05114         153 DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----------  222 (256)
T ss_pred             CceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------
Confidence            221    1233457999999998899999999999999999999 9999998887766666543211000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               |.                           .....+.+||.+||+.||.+|||+++
T Consensus       223 -------------------------~~---------------------------~~~~~~~~li~~c~~~~p~~Rps~~~  250 (256)
T cd05114         223 -------------------------PK---------------------------LASMTVYEVMYSCWHEKPEGRPTFAE  250 (256)
T ss_pred             -------------------------CC---------------------------CCCHHHHHHHHHHccCCcccCcCHHH
Confidence                                     00                           00125789999999999999999999


Q ss_pred             Hhc
Q psy11727        424 VLR  426 (437)
Q Consensus       424 ~l~  426 (437)
                      +++
T Consensus       251 l~~  253 (256)
T cd05114         251 LLR  253 (256)
T ss_pred             HHH
Confidence            985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0193|consensus

Probab=100.00  E-value=1.9e-40  Score=327.07  Aligned_cols=249  Identities=26%  Similarity=0.319  Sum_probs=195.6

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      +...+...+...||+|+||+||+|.+..+   ||||++....   .....+..|+..+++-     +|.||+-+.|++..
T Consensus       388 eIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-----RH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  388 EIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKT-----RHENILLFMGACMN  459 (678)
T ss_pred             ccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhc-----chhhheeeehhhcC
Confidence            44456678899999999999999998664   9999997543   3345566777777766     78899999999998


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      +.+ .||+.+|+| +|+.++.-.. ..|.+..++.|++||++|+.|||.+  +|||||||..|||+  .+++.|||+|||
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK--~IIHrDLKSnNIFl--~~~~kVkIgDFG  533 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK--NIIHRDLKSNNIFL--HEDLKVKIGDFG  533 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh--hhhhhhccccceEE--ccCCcEEEeccc
Confidence            877 999999988 8999887654 4589999999999999999999976  69999999999999  667899999999


Q ss_pred             CceecC-----CccccccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        262 SSCHVG-----QTLYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       262 ~s~~~~-----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      ++....     .......|+..|||||+++.+   +|++.+||||||+++|||+||..||...+.+.++-.+-.++.+|.
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd  613 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD  613 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc
Confidence            986542     233345678889999999854   699999999999999999999999995554433333222222221


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ..-.                                           ...+               ..++++|+..|+.+
T Consensus       614 ~s~~-------------------------------------------~s~~---------------pk~mk~Ll~~C~~~  635 (678)
T KOG0193|consen  614 LSKI-------------------------------------------RSNC---------------PKAMKRLLSDCWKF  635 (678)
T ss_pred             chhh-------------------------------------------hccC---------------HHHHHHHHHHHHhc
Confidence            1000                                           0000               12679999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy11727        414 DPKKRISPTNVLR  426 (437)
Q Consensus       414 dP~~R~t~~e~l~  426 (437)
                      +|++||+..++|.
T Consensus       636 ~~~eRP~F~~il~  648 (678)
T KOG0193|consen  636 DREERPLFPQLLS  648 (678)
T ss_pred             CcccCccHHHHHH
Confidence            9999999988875

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.9e-39  Score=304.07  Aligned_cols=246  Identities=22%  Similarity=0.337  Sum_probs=199.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||.||+|.+.. +..||+|.++........+..|+.++..+     .|+||+++++++...+..++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKL-----RHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHC-----CCCCccceeEEEecCCCeee
Confidence            4679999999999999999998754 56899999975544445677788888776     68899999999999999999


Q ss_pred             EEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||++ +++|.+++.......+++..+..++.|++.||.+||+  .||+||||||+||++  ++++.++|+|||++....
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~--~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA--QNYIHRDLAARNVLV--GENNICKVADFGLARVIK  154 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCcceEEE--cCCCCEEECCcceEEEcc
Confidence            99999 5689999877554568999999999999999999995  489999999999999  678889999999997765


Q ss_pred             Cccc-cccc---cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY-QYIQ---SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~-~~~g---t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .... ...+   +..|+|||++.+..++.++|+||||+++|+|++ |++||.+.+.......+......+..        
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  226 (261)
T cd05068         155 EDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP--------  226 (261)
T ss_pred             CCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            3322 1222   346999999999899999999999999999999 99999988766655554322111100        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                            ......+.+++.+||+.||.+|||++
T Consensus       227 ------------------------------------------------------~~~~~~~~~li~~~l~~~P~~Rp~~~  252 (261)
T cd05068         227 ------------------------------------------------------PGCPKELYDIMLDCWKEDPDDRPTFE  252 (261)
T ss_pred             ------------------------------------------------------CcCCHHHHHHHHHHhhcCcccCCCHH
Confidence                                                                  00012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05068         253 TLQW  256 (261)
T ss_pred             HHHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=5e-39  Score=309.34  Aligned_cols=257  Identities=21%  Similarity=0.320  Sum_probs=197.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ..++|++.+.||+|+||.||+|..+.     .+..||+|.+......  ...+..|+.+++.+     .|+||+++++++
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-----TCHHVVRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            35789999999999999999997542     3558999988643221  12234455555544     789999999999


Q ss_pred             eECCEEEEEEEecc-CcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        181 TWKNHLCLVFELLS-YNLYNLIRNTN--------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       181 ~~~~~~~lV~E~~~-~~L~~~l~~~~--------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      ...+..|+||||++ |+|.+++....        ....+...+..++.||+.||.|||++  ||+||||||+||++  ++
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~i~H~dikp~nili--~~  154 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK--KFVHRDLAARNCMV--AH  154 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CCcCCCCChheEEE--cC
Confidence            99999999999996 48999886532        12346778899999999999999964  89999999999999  66


Q ss_pred             CCCEEEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      ++.++|+|||++........     ...++..|+|||.+.+..++.++|+|||||++|||++ |.+||.+.+..+....+
T Consensus       155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (288)
T cd05061         155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV  234 (288)
T ss_pred             CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            88899999999875432211     1234567999999998899999999999999999999 78999887766555444


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      ..... ++                                  .+                           ......+.+
T Consensus       235 ~~~~~-~~----------------------------------~~---------------------------~~~~~~~~~  252 (288)
T cd05061         235 MDGGY-LD----------------------------------QP---------------------------DNCPERVTD  252 (288)
T ss_pred             HcCCC-CC----------------------------------CC---------------------------CCCCHHHHH
Confidence            32100 00                                  00                           000125799


Q ss_pred             HHHHccccCCCCCCCHHHHhc------CCCcCcCCC
Q psy11727        406 LILRMLTYDPKKRISPTNVLR------HEFFLKHSV  435 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~------Hp~~~~~~~  435 (437)
                      +|.+||+.||.+|||+.++++      ||||...++
T Consensus       253 li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         253 LMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence            999999999999999999987      999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.1e-39  Score=311.16  Aligned_cols=257  Identities=28%  Similarity=0.392  Sum_probs=198.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||.++....  .......|+.++...    ..|+||+++++++.+...+
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~i~~~~~~~~~~~~~   89 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVKCYGYFITDSDV   89 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc----cCCCchHhhheeeecCCeE
Confidence            4679999999999999999999998899999999974321  112233344433332    2689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      |+||||+++.+.+++.... ..+++..+..++.||+.||+|||+. .||+||||+|+||++  ++++.+||+|||++...
T Consensus        90 ~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill--~~~~~~kL~dfg~~~~~  165 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILL--DASGNVKLCDFGISGRL  165 (296)
T ss_pred             EEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEE--cCCCCEEECccccchhc
Confidence            9999999888877776543 3689999999999999999999963 389999999999999  67889999999998765


Q ss_pred             CCc--cccccccccccChhhhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChhhhcc
Q psy11727        267 GQT--LYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFSGKNE-VDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       267 ~~~--~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ...  .....++..|+|||++.+..    ++.++|+||||+++|+|++|+.||..... .+.+..+....  .+.     
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~-----  238 (296)
T cd06618         166 VDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE--PPS-----  238 (296)
T ss_pred             cCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--CCC-----
Confidence            332  12334678899999997654    78999999999999999999999976432 22333322110  000     


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                  .+..                         ......+.+||.+||..||.+||
T Consensus       239 ----------------------------~~~~-------------------------~~~~~~l~~li~~~l~~~p~~Rp  265 (296)
T cd06618         239 ----------------------------LPPN-------------------------EGFSPDFCSFVDLCLTKDHRKRP  265 (296)
T ss_pred             ----------------------------CCCC-------------------------CCCCHHHHHHHHHHccCChhhCC
Confidence                                        0000                         00012579999999999999999


Q ss_pred             CHHHHhcCCCcCcC
Q psy11727        420 SPTNVLRHEFFLKH  433 (437)
Q Consensus       420 t~~e~l~Hp~~~~~  433 (437)
                      |++++++||||+..
T Consensus       266 ~~~~il~~~~~~~~  279 (296)
T cd06618         266 KYRELLQHPFIRRY  279 (296)
T ss_pred             CHHHHhcChhhhcc
Confidence            99999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=3.2e-39  Score=305.27  Aligned_cols=246  Identities=32%  Similarity=0.466  Sum_probs=198.0

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||.|+||.||+|.+..+++.+|+|.+.....    .......|+.++..+     .|+||+++++.+...+..|+|||++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-----QSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-----CCcchhHHHHheecCcEEEEEEecC
Confidence            6899999999999999999999999864332    233445555655554     6899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc---
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---  269 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~---  269 (437)
                      .+ +|.+++....  .+++..+..++.||+.||+|||.  .|++|+||+|+||++  +.++.++|+|||++......   
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~--~~i~H~di~~~nil~--~~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHS--NGIIHRDLKPDNILI--DSNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCCCHHHeEE--cCCCCEEEEecccchhcccCccc
Confidence            65 8888887654  58999999999999999999995  489999999999999  67888999999998654222   


Q ss_pred             --------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        270 --------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       270 --------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                              .....++..|+|||+..+..++.++|+||||+++|++++|..||...........+......++..      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------  223 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED------  223 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc------
Confidence                    123457788999999998889999999999999999999999998887766655543311000000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                             ......+.+||.+||+.+|.+|||+
T Consensus       224 -------------------------------------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~  248 (265)
T cd05579         224 -------------------------------------------------------VEVSDEAIDLISKLLVPDPEKRLGA  248 (265)
T ss_pred             -------------------------------------------------------ccCCHHHHHHHHHHhcCCHhhcCCC
Confidence                                                                   0001257899999999999999999


Q ss_pred             ---HHHhcCCCcCcCCC
Q psy11727        422 ---TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ---~e~l~Hp~~~~~~~  435 (437)
                         .++|+||||++.++
T Consensus       249 ~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         249 KSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             ccHHHHhcCccccCCCC
Confidence               99999999987653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.2e-39  Score=301.39  Aligned_cols=249  Identities=32%  Similarity=0.485  Sum_probs=203.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|.+.+.||.|+||.||++.+..++..||+|++....   ........|+.++..+     .|+|++++.+.+...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~~~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-----NHPNIIKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-----CCCChhheEEEEecCCEEE
Confidence            5889999999999999999999999999999987432   2234455677666665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        188 LVFELLSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|+|++++ +|.+.+....  ...+++..+..++.|++.||+|||++  |++|+||+|+||++  +.++.++|+|||.+.
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~~H~dl~~~nil~--~~~~~~~l~d~~~~~  151 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR--KILHRDIKPQNIFL--TSNGLVKLGDFGISK  151 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC--CEecccCChHHeEE--cCCCcEEECCcccee
Confidence            99999976 8988887643  35689999999999999999999964  89999999999999  667889999999987


Q ss_pred             ecCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ......   ....|+..|+|||.+.+..++.++|+||+|+++++|++|..||...+.......+......+.        
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------  223 (258)
T cd08215         152 VLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI--------  223 (258)
T ss_pred             ecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC--------
Confidence            664432   235678899999999998999999999999999999999999988775554444322110000        


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                               +.                                             .....+.++|.+||..||.+|||+
T Consensus       224 ---------~~---------------------------------------------~~~~~~~~~i~~~l~~~p~~Rp~~  249 (258)
T cd08215         224 ---------PS---------------------------------------------QYSSELRNLVSSLLQKDPEERPSI  249 (258)
T ss_pred             ---------CC---------------------------------------------CCCHHHHHHHHHHcCCChhhCcCH
Confidence                     00                                             001257899999999999999999


Q ss_pred             HHHhcCCCc
Q psy11727        422 TNVLRHEFF  430 (437)
Q Consensus       422 ~e~l~Hp~~  430 (437)
                      .++|+||||
T Consensus       250 ~~ll~~~~~  258 (258)
T cd08215         250 AQILQSPFI  258 (258)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=2.6e-39  Score=317.40  Aligned_cols=293  Identities=20%  Similarity=0.215  Sum_probs=194.9

Q ss_pred             ceeccc--CceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        116 TLLGKG--SFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       116 ~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      ..||+|  +||+||+|.+..+++.||+|++......   .+.+..|+.+++.+     .|+||++++++|...+..++||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-----RHPNIMTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcceEeeeEecCCceEEEE
Confidence            456666  9999999999999999999998643221   23445555555444     7899999999999999999999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC-
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-  268 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~-  268 (437)
                      ||+.+ ++.+++.......+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.++++||+.+..... 
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~--~~ivHrDlkp~Nill--~~~~~~~~~~~~~~~~~~~~  154 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ--NGYIHRNIKASHILI--SGDGLVSLSGLSHLYSLVRN  154 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEE--eCCCcEEEechHHHhhhhcc
Confidence            99965 88888876544568999999999999999999995  489999999999999  5678899999985432211 


Q ss_pred             --c-------cccccccccccChhhhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        269 --T-------LYQYIQSRYYRSPEVLLGI--PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       269 --~-------~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                        .       .....++..|+|||++.+.  .++.++|||||||++|+|++|.+||.+.........+.......|....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (328)
T cd08226         155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT  234 (328)
T ss_pred             CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence              0       0112245669999999763  4789999999999999999999999887665544443332111111000


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      ........+..    ............ ...+..  ....        .... .....+......+.+||++||++||.+
T Consensus       235 ~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~--~~~~--------~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~  298 (328)
T cd08226         235 TFPCEESRMKN----SQSGVDSGIGES-VVAAGM--TQTM--------TSER-LRTPSSKTFSPAFQNLVELCLQQDPEK  298 (328)
T ss_pred             ccchhhhhhcc----chhhhhcccccc-hhcccc--cccc--------cccc-ccchhhhhhhHHHHHHHHHHccCCccc
Confidence            00000000000    000000000000 000000  0000        0000 000111223347899999999999999


Q ss_pred             CCCHHHHhcCCCcCcC
Q psy11727        418 RISPTNVLRHEFFLKH  433 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~  433 (437)
                      |||+.|+|+||||.+.
T Consensus       299 Rpta~e~l~~~~~~~~  314 (328)
T cd08226         299 RPSASSLLSHAFFKQV  314 (328)
T ss_pred             CCCHHHHhhCHHHHHH
Confidence            9999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG4279|consensus

Probab=100.00  E-value=2.6e-40  Score=328.63  Aligned_cols=248  Identities=26%  Similarity=0.432  Sum_probs=199.7

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEecCC-cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      +||+|.||+||-|++..|...+|||.+..+ +........|+.+...+     .|.|||+++|.+..++++-|.||-++|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-----rHkNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-----RHKNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-----hhHhHHHHhhccCCCCeEEEEeecCCC
Confidence            689999999999999999999999999754 34455677888888887     678899999999999999999999976


Q ss_pred             -cHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---Cc
Q psy11727        196 -NLYNLIRNTNFHGV--SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QT  269 (437)
Q Consensus       196 -~L~~~l~~~~~~~l--s~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---~~  269 (437)
                       +|.+++... -+++  .++.+-.+.+||+.||.|||..  .|||||||-+|||+. .-.|.+||+|||.++...   .-
T Consensus       657 GSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen--~IVHRDIKGDNVLvN-TySGvlKISDFGTsKRLAginP~  732 (1226)
T KOG4279|consen  657 GSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHEN--KIVHRDIKGDNVLVN-TYSGVLKISDFGTSKRLAGINPC  732 (1226)
T ss_pred             CcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhc--ceeeccccCCcEEEe-eccceEEecccccchhhccCCcc
Confidence             677777653 3456  8899999999999999999965  699999999999996 477899999999998763   23


Q ss_pred             cccccccccccChhhhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        270 LYQYIQSRYYRSPEVLLGI--PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       270 ~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      ..++.||..|||||++..+  +|+.++|||||||++.||.||+|||......             ...|..     ..+|
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp-------------qAAMFk-----VGmy  794 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP-------------QAAMFK-----VGMY  794 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-------------hHhhhh-----hcce
Confidence            3468899999999999765  5999999999999999999999999753321             111110     0011


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ...                                          |.-+.+...+.+.||.+|+.+||.+||+|+++|+.
T Consensus       795 KvH------------------------------------------P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  795 KVH------------------------------------------PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             ecC------------------------------------------CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            110                                          01112223367899999999999999999999999


Q ss_pred             CCcCcC
Q psy11727        428 EFFLKH  433 (437)
Q Consensus       428 p~~~~~  433 (437)
                      ||++..
T Consensus       833 pFlq~~  838 (1226)
T KOG4279|consen  833 PFLQHN  838 (1226)
T ss_pred             cccccC
Confidence            999864

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.8e-39  Score=309.12  Aligned_cols=247  Identities=25%  Similarity=0.341  Sum_probs=196.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.++....  ....+..|+.+++.+     .|+||+++++++.
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~   78 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-----QHENIVKFYGVCT   78 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-----CCCCchheeeEEe
Confidence            3568899999999999999998743     467899999874432  234667788887776     6889999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      ..+..++||||+++ +|.+++....            ...+++..+..++.||+.||.|||++  |++||||||+||++ 
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~--~i~h~dlkp~nili-  155 (280)
T cd05049          79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ--HFVHRDLATRNCLV-  155 (280)
T ss_pred             cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC--CeeccccccceEEE-
Confidence            99999999999965 8988886542            23478899999999999999999954  89999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                       +.++.++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus       156 -~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~  234 (280)
T cd05049         156 -GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI  234 (280)
T ss_pred             -cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence             677899999999987543221     12334678999999999999999999999999999998 99999887776655


Q ss_pred             HHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhH
Q psy11727        323 TKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMK  402 (437)
Q Consensus       323 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (437)
                      ..+......++..                                                              .....
T Consensus       235 ~~~~~~~~~~~~~--------------------------------------------------------------~~~~~  252 (280)
T cd05049         235 ECITQGRLLQRPR--------------------------------------------------------------TCPSE  252 (280)
T ss_pred             HHHHcCCcCCCCC--------------------------------------------------------------CCCHH
Confidence            5543211000000                                                              00015


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q psy11727        403 FKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       403 ~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      +.+||++||+.||.+|||+.|+++
T Consensus       253 ~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         253 VYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHH
Confidence            789999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG2345|consensus

Probab=100.00  E-value=9.5e-40  Score=290.68  Aligned_cols=199  Identities=26%  Similarity=0.329  Sum_probs=163.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK----  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~----  183 (437)
                      .+||.+.+.||+|||+.||+++...+++.+|+|++.-.. ...+...+|+...+++     .|||+++++++...+    
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-----~s~~vl~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-----NSPNVLRLVDHQLREEKDG   94 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-----CCcchHHHHHHHHHhhccC
Confidence            468999999999999999999999999999999986433 3334455566665555     789999999987543    


Q ss_pred             -CEEEEEEEec-cCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        184 -NHLCLVFELL-SYNLYNLIRNTNF--HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       184 -~~~~lV~E~~-~~~L~~~l~~~~~--~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                       ...||+++|. .|+|.+.+.....  ..+++..+..|+.+|++||.+||.....+.||||||.|||+  .+.+.++|.|
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl--s~~~~~vl~D  172 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL--SDSGLPVLMD  172 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe--cCCCceEEEe
Confidence             3599999999 5679998865433  34899999999999999999999875569999999999999  5578899999


Q ss_pred             CCCceecCCccc------------cccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        260 FGSSCHVGQTLY------------QYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       260 FG~s~~~~~~~~------------~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      ||+++...-...            .-..|..|+|||.+.-+   ..+.++|||||||+||+|+.|..||.
T Consensus       173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence            999976543221            22457889999998644   56789999999999999999999996

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1e-38  Score=306.72  Aligned_cols=257  Identities=26%  Similarity=0.410  Sum_probs=208.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|++.........+..|+.++..+     .|+|++++++.+...+..+
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   91 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-----KHPNIVDYYDSYLVGDELW   91 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-----CCCCeeEEEEEEEECCEEE
Confidence            45679999999999999999999998899999999975443344566677777665     6889999999999999999


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+||++ ++|.+++.... ..+++..+..++.|++.||+|||+  .|++|+||+|+||++  +.++.++|+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~--~gi~H~dl~p~ni~i--~~~~~~~l~d~~~~~~~  166 (286)
T cd06614          92 VVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS--QNVIHRDIKSDNILL--SKDGSVKLADFGFAAQL  166 (286)
T ss_pred             EEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCChhhEEE--cCCCCEEECccchhhhh
Confidence            9999997 58999988754 368999999999999999999995  589999999999999  67888999999988654


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....++..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+... +.++...       
T Consensus       167 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~-------  238 (286)
T cd06614         167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPPLKN-------  238 (286)
T ss_pred             ccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCCcc-------
Confidence            322   12345678899999999989999999999999999999999999887765544443221 0000000       


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                          ...-...+.+||++||+.+|.+|||+.+
T Consensus       239 ----------------------------------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~  266 (286)
T cd06614         239 ----------------------------------------------------PEKWSPEFKDFLNKCLVKDPEKRPSAEE  266 (286)
T ss_pred             ----------------------------------------------------hhhCCHHHHHHHHHHhccChhhCcCHHH
Confidence                                                                0000125789999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +++||||++..
T Consensus       267 il~~~~~~~~~  277 (286)
T cd06614         267 LLQHPFLKKAC  277 (286)
T ss_pred             HhhChHhhccC
Confidence            99999998843

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=8.3e-39  Score=302.88  Aligned_cols=246  Identities=21%  Similarity=0.316  Sum_probs=197.3

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|++.++||+|+||.||+|... +++.||+|.+.........+..|+.++..+     .|+||+++++++. .+..+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~   76 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL-----QHPRLVRLYAVVT-QEPIY   76 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc-----CCcCeeeEEEEEc-cCCcE
Confidence            4568999999999999999999864 567899999976554456677788887776     6889999998764 56789


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|||++. ++|.+++.......+++..+..++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||++...
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~--~~i~H~dl~p~ni~i--~~~~~~~l~dfg~~~~~  152 (260)
T cd05067          77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER--KNYIHRDLRAANILV--SETLCCKIADFGLARLI  152 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHHhEEE--cCCCCEEEccCcceeec
Confidence            9999995 489998876555568999999999999999999995  589999999999999  67888999999999765


Q ss_pred             CCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .....    ...++..|+|||++.+..++.++|+||||+++|||++ |++||.+.+..+....+......+...      
T Consensus       153 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------  226 (260)
T cd05067         153 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPD------  226 (260)
T ss_pred             CCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCC------
Confidence            42211    2234567999999998889999999999999999999 999999877665555443211111000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                              .....+.+||.+||+.||++|||+
T Consensus       227 --------------------------------------------------------~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         227 --------------------------------------------------------NCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             --------------------------------------------------------CCCHHHHHHHHHHccCChhhCCCH
Confidence                                                                    001157999999999999999999


Q ss_pred             HHHhc
Q psy11727        422 TNVLR  426 (437)
Q Consensus       422 ~e~l~  426 (437)
                      ++++.
T Consensus       251 ~~l~~  255 (260)
T cd05067         251 EYLRS  255 (260)
T ss_pred             HHHHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.4e-38  Score=310.26  Aligned_cols=254  Identities=24%  Similarity=0.354  Sum_probs=201.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.|...+.||+|+||+||+|++..++..||+|++......    ...+..|+.+++.+     .|+|++++++++.+.+
T Consensus        20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   94 (313)
T cd06633          20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-----KHPNTIEYKGCYLKEH   94 (313)
T ss_pred             HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCC
Confidence            34477788899999999999999999999999998643221    12344566666554     7899999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ..++||||+.+++.+++.... ..+++..+..++.||+.||.|||+  .|++|+||+|+||++  +.++.+||+|||++.
T Consensus        95 ~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dl~p~nili--~~~~~~kL~dfg~~~  169 (313)
T cd06633          95 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILL--TEPGQVKLADFGSAS  169 (313)
T ss_pred             EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChhhEEE--CCCCCEEEeecCCCc
Confidence            999999999999888876644 458999999999999999999995  489999999999999  667889999999986


Q ss_pred             ecCCccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .... .....|+..|+|||++.   +..++.++|+|||||++|+|++|.+||...+.......+...  .++....    
T Consensus       170 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~----  242 (313)
T cd06633         170 KSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQS----  242 (313)
T ss_pred             ccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCc----
Confidence            5432 23457888999999984   356889999999999999999999999887665555444221  0100000    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                             ......+.+||.+||+.+|.+|||+
T Consensus       243 -------------------------------------------------------~~~~~~l~~li~~~l~~~P~~Rp~~  267 (313)
T cd06633         243 -------------------------------------------------------NEWTDSFRGFVDYCLQKIPQERPAS  267 (313)
T ss_pred             -------------------------------------------------------cccCHHHHHHHHHHccCChhhCcCH
Confidence                                                                   0000147899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      .+++.||||+...
T Consensus       268 ~~~l~~~~~~~~~  280 (313)
T cd06633         268 AELLRHDFVRRDR  280 (313)
T ss_pred             HHHhcCcccCCCc
Confidence            9999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.2e-38  Score=303.03  Aligned_cols=248  Identities=27%  Similarity=0.437  Sum_probs=190.2

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      ....||+|+||.||+|.+..++..||+|.+..... ....+..|+.+++.+     .|+||+++++++...+..++||||
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-----KHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-----CCCCeeeeeeeeccCCEEEEEEec
Confidence            34579999999999999999999999999864432 234566777777665     789999999999999999999999


Q ss_pred             ccC-cHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        193 LSY-NLYNLIRNTNFHGV--SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       193 ~~~-~L~~~l~~~~~~~l--s~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      +++ +|.+++.... ..+  ++..+..++.||+.||+|||+  .||+||||||+||+++. ..+.++|+|||++......
T Consensus        87 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          87 VPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHD--NQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGI  162 (268)
T ss_pred             CCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcC-CCCeEEEecchhheecccC
Confidence            965 8888887542 234  788899999999999999995  48999999999999942 3568999999998765321


Q ss_pred             ---cccccccccccChhhhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        270 ---LYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       270 ---~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                         .....++..|+|||++.+..  ++.++|+||||+++|+|++|.+||...................+           
T Consensus       163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  231 (268)
T cd06624         163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP-----------  231 (268)
T ss_pred             CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC-----------
Confidence               22345788999999987643  78999999999999999999999975432111110000000000           


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                       ..+......+.+|+++||+.+|.+|||+.|+
T Consensus       232 -------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l  262 (268)
T cd06624         232 -------------------------------------------------EIPESLSAEAKNFILRCFEPDPDKRASAHDL  262 (268)
T ss_pred             -------------------------------------------------CCCcccCHHHHHHHHHHcCCCchhCCCHHHH
Confidence                                                             0000011257899999999999999999999


Q ss_pred             hcCCCc
Q psy11727        425 LRHEFF  430 (437)
Q Consensus       425 l~Hp~~  430 (437)
                      +.||||
T Consensus       263 l~~~~~  268 (268)
T cd06624         263 LQDPFL  268 (268)
T ss_pred             HhCCCC
Confidence            999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=7.4e-39  Score=302.88  Aligned_cols=245  Identities=23%  Similarity=0.312  Sum_probs=196.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|.+.+.||+|+||+||+|.+.. +..+|+|.+.........+..|+.+++.+     .||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL-----SHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC-----CCCCeeeEEEEEccCCCcEEE
Confidence            468999999999999999997654 45699999875544345667777777665     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+.+ +|.+++.... ..+++..++.++.||+.||+|||+  .|++|+||||+||++  +.++.+||+|||++.....
T Consensus        78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~nili--~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLES--KQFIHRDLAARNCLV--DDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEE--cCCCCEEECCCccceecCC
Confidence            999965 7888887643 358999999999999999999995  489999999999999  6678899999999875533


Q ss_pred             ccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...    ...++..|+|||++.+..++.++|+|||||++|+|++ |..||...+..+....+......+...        
T Consensus       153 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------  224 (256)
T cd05113         153 DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPH--------  224 (256)
T ss_pred             CceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCC--------
Confidence            221    1234467999999998889999999999999999999 999998877665555553321110000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                            .....+.+++.+||+.||.+|||+.+
T Consensus       225 ------------------------------------------------------~~~~~~~~li~~cl~~~p~~Rp~~~~  250 (256)
T cd05113         225 ------------------------------------------------------LASEKVYAIMYSCWHEKAEERPTFQQ  250 (256)
T ss_pred             ------------------------------------------------------CCCHHHHHHHHHHcCCCcccCCCHHH
Confidence                                                                  00125789999999999999999999


Q ss_pred             HhcC
Q psy11727        424 VLRH  427 (437)
Q Consensus       424 ~l~H  427 (437)
                      ++.+
T Consensus       251 ll~~  254 (256)
T cd05113         251 LLSS  254 (256)
T ss_pred             HHHh
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.8e-38  Score=298.57  Aligned_cols=249  Identities=29%  Similarity=0.483  Sum_probs=201.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NH  185 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~  185 (437)
                      +|.+.+.||+|++|.||+|.+..++..|++|++....   .....+..|+.+++.+     .|+||+++++.+...  +.
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-----QHPNIVRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEecCCCCe
Confidence            4788899999999999999999899999999987544   2345566777777776     589999999999988  89


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++|+|+++ ++|.+++....  .+++..+..++.|++.||+|||+  .|++|+||+|+||++  +.++.++|+|||.+.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~--~~~~h~dl~p~ni~i--~~~~~~~l~d~~~~~  149 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS--NGIVHRDIKGANILV--DSDGVVKLADFGCAK  149 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEE--cCCCCEEEcccccEE
Confidence            999999995 58988887654  68999999999999999999996  589999999999999  567889999999998


Q ss_pred             ecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ......     ....++..|+|||.+.+..++.++|+||||+++++|++|..||...+.  ....+........      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~------  221 (260)
T cd06606         150 RLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIGSSGE------  221 (260)
T ss_pred             ecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhccccCC------
Confidence            765442     345678899999999988899999999999999999999999987662  1111111100000      


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                             ..                  ..|                           ......+.+||.+||+.||.+||
T Consensus       222 -------~~------------------~~~---------------------------~~~~~~l~~~i~~~l~~~p~~Rp  249 (260)
T cd06606         222 -------PP------------------EIP---------------------------EHLSEEAKDFLRKCLRRDPKKRP  249 (260)
T ss_pred             -------Cc------------------CCC---------------------------cccCHHHHHHHHHhCcCChhhCC
Confidence                   00                  000                           00012679999999999999999


Q ss_pred             CHHHHhcCCCc
Q psy11727        420 SPTNVLRHEFF  430 (437)
Q Consensus       420 t~~e~l~Hp~~  430 (437)
                      |+.++++||||
T Consensus       250 ~~~~ll~~~~~  260 (260)
T cd06606         250 TADELLQHPFL  260 (260)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=6e-39  Score=308.87  Aligned_cols=255  Identities=29%  Similarity=0.468  Sum_probs=200.3

Q ss_pred             CeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .|++.+.||+|+||.||+|.+.   .+|..||+|+++...     ........|+.+++.+.    +|++|+.++++|..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~i~~~~~~~~~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAFQT   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc----cCCChhceeeEeec
Confidence            4889999999999999999874   478999999986422     12345566888887764    57899999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      +..+|+||||+++ +|.+++....  .+++..+..++.|++.||.|||+  .|++||||+|+|||+  +.++.+||+|||
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nil~--~~~~~~kl~dfg  150 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHK--LGIIYRDIKLENILL--DSNGHVVLTDFG  150 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEE--CCCCCEEEeeCc
Confidence            9999999999975 8988887653  58899999999999999999995  589999999999999  667889999999


Q ss_pred             CceecCCc----cccccccccccChhhhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC--CCC
Q psy11727        262 SSCHVGQT----LYQYIQSRYYRSPEVLLGI--PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG--MPP  333 (437)
Q Consensus       262 ~s~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--~p~  333 (437)
                      ++......    .....|+..|+|||++.+.  .++.++|+||||+++|+|++|..||...........+.+...  .++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (290)
T cd05613         151 LSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP  230 (290)
T ss_pred             cceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC
Confidence            98765332    2235688899999998753  477899999999999999999999975433222222222110  000


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                                                        .|                           ......+.+|+++||+.
T Consensus       231 ----------------------------------~~---------------------------~~~~~~~~~ll~~~l~~  249 (290)
T cd05613         231 ----------------------------------YP---------------------------QEMSALAKDIIQRLLMK  249 (290)
T ss_pred             ----------------------------------CC---------------------------ccCCHHHHHHHHHHhcC
Confidence                                              00                           00012578999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCcCcCCCC
Q psy11727        414 DPKKRI-----SPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       414 dP~~R~-----t~~e~l~Hp~~~~~~~~  436 (437)
                      ||.+||     ++++++.||||++..++
T Consensus       250 ~p~~R~~~~~~~~~~l~~~~~~~~~~~~  277 (290)
T cd05613         250 DPKKRLGCGPSDADEIKKHPFFQKINWD  277 (290)
T ss_pred             CHHHhcCCCCCCHHHHHcCcccccCCHH
Confidence            999997     89999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.1e-38  Score=310.68  Aligned_cols=275  Identities=22%  Similarity=0.266  Sum_probs=191.7

Q ss_pred             CceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cH
Q psy11727        122 SFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NL  197 (437)
Q Consensus       122 ~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L  197 (437)
                      ++|.||.++...+++.||||++...   ......+..|+.++..+     .|+||++++++|...+..+++|||+++ +|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-----QHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            4566666666779999999998743   22334666777777766     689999999999999999999999975 78


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc--------
Q psy11727        198 YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--------  269 (437)
Q Consensus       198 ~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~--------  269 (437)
                      .+++.......+++..+..++.|++.||+|||++  ||+||||||+||++  +.++.+||+|||.+......        
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~--~ivH~dlk~~Nili--~~~~~~kl~d~~~~~~~~~~~~~~~~~~  162 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK--GFIHRSVKASHILL--SGDGKVVLSGLRYSVSMIKHGKRQRVVH  162 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCcceEEE--ecCCceEEecCccceeeccccccccccc
Confidence            8888765445689999999999999999999964  89999999999999  56788999999988654211        


Q ss_pred             --cccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        270 --LYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       270 --~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                        .....++..|+|||++.+  ..++.++|+|||||++|+|++|.+||............  ..+..+..+.. ... ..
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~-~~~-~~  238 (314)
T cd08216         163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK--VRGTVPCLLDK-STY-PL  238 (314)
T ss_pred             cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhccCcccccc-Cch-hh
Confidence              122346778999999976  35889999999999999999999999876654332221  12222111110 000 00


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                      .......       ..  .....                +.................+.+||.+||.+||++|||++++|
T Consensus       239 ~~~~~~~-------~~--~~~~~----------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll  293 (314)
T cd08216         239 YEDSMSQ-------SR--SSNEH----------------PNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL  293 (314)
T ss_pred             hcCCcCc-------cc--ccccc----------------cchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence            0000000       00  00000                00000000011112223688999999999999999999999


Q ss_pred             cCCCcCcCC
Q psy11727        426 RHEFFLKHS  434 (437)
Q Consensus       426 ~Hp~~~~~~  434 (437)
                      +||||++..
T Consensus       294 ~~p~~~~~~  302 (314)
T cd08216         294 NHSFFKQCK  302 (314)
T ss_pred             cCchHhhhc
Confidence            999998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.7e-38  Score=310.09  Aligned_cols=252  Identities=26%  Similarity=0.359  Sum_probs=201.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ..|...+.||+|+||.||++++..++..||+|.+......    ...+..|+.+++.+     .|+|++++++++.+.+.
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   99 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-----KHPNSIEYKGCYLREHT   99 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEeeCCe
Confidence            4588899999999999999999999999999998643221    22344566666554     78999999999999999


Q ss_pred             EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        186 LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       186 ~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      .++||||++|+|.+.+.... ..+++..+..++.||+.||.|||+  .||+||||+|+||++  +.++.++|+|||++..
T Consensus       100 ~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~i~H~dL~p~Nil~--~~~~~~kl~dfg~~~~  174 (317)
T cd06635         100 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILL--TEPGQVKLADFGSASI  174 (317)
T ss_pred             EEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcccEEE--CCCCCEEEecCCCccc
Confidence            99999999999888776543 458999999999999999999995  489999999999999  6678899999999865


Q ss_pred             cCCccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .... ....++..|+|||++.   +..++.++|||||||++|+|++|.+||...+.......+......+..        
T Consensus       175 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  245 (317)
T cd06635         175 ASPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ--------  245 (317)
T ss_pred             cCCc-ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCC--------
Confidence            5432 3456888999999984   456889999999999999999999999887665555544332110000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                           .......+.+||.+||+.+|.+|||+.
T Consensus       246 -----------------------------------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~  272 (317)
T cd06635         246 -----------------------------------------------------SNEWSDYFRNFVDSCLQKIPQDRPTSE  272 (317)
T ss_pred             -----------------------------------------------------CccccHHHHHHHHHHccCCcccCcCHH
Confidence                                                                 000011478999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      ++++|||+...
T Consensus       273 ~il~~~~~~~~  283 (317)
T cd06635         273 ELLKHMFVLRE  283 (317)
T ss_pred             HHHhChhhhcc
Confidence            99999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.4e-39  Score=309.62  Aligned_cols=248  Identities=23%  Similarity=0.324  Sum_probs=194.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe--EEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC--QVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.++...  .....+..|+.++.++.    +||||+++++++...+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~   77 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG----HHPNIINLLGACENRGY   77 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc----CCCchhheEEEEccCCc
Confidence            579999999999999999999877764  47888876321  22345666777777663    58999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        186 LCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      +++||||+++ +|.+++....              ...+++..++.++.||+.||+|||+  .||+||||||+|||+  +
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~Nill--~  153 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE--KQFIHRDLAARNVLV--G  153 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCcCCcceEEE--C
Confidence            9999999964 8998886532              1248899999999999999999995  489999999999999  6


Q ss_pred             CCCCEEEEeCCCceecCCccccc--cccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Q psy11727        251 KRSAIKIIDFGSSCHVGQTLYQY--IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIE  327 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~  327 (437)
                      .++.+||+|||++..........  ..+..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+..
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~  233 (297)
T cd05089         154 ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  233 (297)
T ss_pred             CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence            67889999999986443222222  22456999999999899999999999999999998 9999998877666555432


Q ss_pred             HhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q psy11727        328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI  407 (437)
Q Consensus       328 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  407 (437)
                      ....+..                                                              ......+.+||
T Consensus       234 ~~~~~~~--------------------------------------------------------------~~~~~~~~~li  251 (297)
T cd05089         234 GYRMEKP--------------------------------------------------------------RNCDDEVYELM  251 (297)
T ss_pred             CCCCCCC--------------------------------------------------------------CCCCHHHHHHH
Confidence            1110000                                                              00012578999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q psy11727        408 LRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       408 ~~~L~~dP~~R~t~~e~l~H  427 (437)
                      .+||+.||.+|||++++++.
T Consensus       252 ~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         252 RQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=9.9e-39  Score=308.24  Aligned_cols=251  Identities=25%  Similarity=0.430  Sum_probs=199.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      |.-...||+|+||.||++....+++.||+|.+..... ....+..|+.++..+     .|+||+++++.|...++.++||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-----CCcchhheeeEEEeCCEEEEEE
Confidence            3344678999999999999999999999999864322 223455566666655     6899999999999999999999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||+++ +|.+++...   .+++..++.++.|++.||+|||+.  |++|+||+|+||++  ++++.++|+|||++......
T Consensus        97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~--givH~dl~p~Nilv--~~~~~~~l~dfg~~~~~~~~  169 (292)
T cd06657          97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQ--GVIHRDIKSDSILL--THDGRVKLSDFGFCAQVSKE  169 (292)
T ss_pred             ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--CCCCCEEEcccccceecccc
Confidence            99976 677766443   479999999999999999999964  89999999999999  67788999999998655332


Q ss_pred             ---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        270 ---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       270 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                         .....++..|+|||++.+..++.++|+||||+++|+|++|.+||.+.........+....  ++..           
T Consensus       170 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~-----------  236 (292)
T cd06657         170 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PPKL-----------  236 (292)
T ss_pred             cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--Cccc-----------
Confidence               223567889999999988889999999999999999999999999877665554443211  1000           


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                       ..+                                              ......+.++|.+||+.||.+|||+.++++
T Consensus       237 -~~~----------------------------------------------~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         237 -KNL----------------------------------------------HKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             -CCc----------------------------------------------ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence             000                                              000114689999999999999999999999


Q ss_pred             CCCcCcCC
Q psy11727        427 HEFFLKHS  434 (437)
Q Consensus       427 Hp~~~~~~  434 (437)
                      ||||.+.-
T Consensus       270 ~~~~~~~~  277 (292)
T cd06657         270 HPFLAKAG  277 (292)
T ss_pred             ChHHhccC
Confidence            99998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.3e-38  Score=301.61  Aligned_cols=245  Identities=23%  Similarity=0.352  Sum_probs=196.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|++.+.||+|+||+||+|.+. ++..+|+|.+.........+..|+.+++.+     .|++++++++++. .+..+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~   76 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL-----RHDKLVQLYAVVS-EEPIY   76 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc-----CCCceEEEEeEEC-CCCcE
Confidence            3568999999999999999999865 456799999976544445677888888776     6789999999875 45688


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..++.++.|++.||+|||+  .|++||||||+||++  ++++.++|+|||++...
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~Nili--~~~~~~~l~dfg~~~~~  152 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER--MNYIHRDLRSANILV--GDGLVCKIADFGLARLI  152 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEE--eCCceEEeCCceeeeec
Confidence            99999965 89998876554568999999999999999999995  489999999999999  56788999999999765


Q ss_pred             CCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .....    ...++..|+|||++.+..++.++|+||||+++|+|++ |.+||.+.+..+....+......+.        
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------  224 (260)
T cd05070         153 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC--------  224 (260)
T ss_pred             cCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--------
Confidence            43221    1234557999999998899999999999999999999 8999988776666555432111000        


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                            +......+.+||.+||..||.+|||+
T Consensus       225 ------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         225 ------------------------------------------------------PQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             ------------------------------------------------------CCcCCHHHHHHHHHHcccCcccCcCH
Confidence                                                                  00001257899999999999999999


Q ss_pred             HHHh
Q psy11727        422 TNVL  425 (437)
Q Consensus       422 ~e~l  425 (437)
                      .+++
T Consensus       251 ~~l~  254 (260)
T cd05070         251 EYLQ  254 (260)
T ss_pred             HHHH
Confidence            9886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.7e-39  Score=311.44  Aligned_cols=249  Identities=25%  Similarity=0.313  Sum_probs=193.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeE--EEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQ--VAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|.+..++..  +|+|.++...  .....+..|+.++..+.    .|+||+++++++...+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~----~h~~iv~~~~~~~~~~   81 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRG   81 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc----CCCCcceEEEEECCCC
Confidence            35799999999999999999998877754  5777765321  22335566877777763    6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      .+++||||+++ +|.+++....              ...+++..++.++.||+.||+|||+  .|++||||||+|||+  
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dlkp~Nili--  157 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILV--  157 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEe--
Confidence            99999999964 8999886542              1247899999999999999999995  489999999999999  


Q ss_pred             CCCCCEEEEeCCCceecCCcccc--ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        250 PKRSAIKIIDFGSSCHVGQTLYQ--YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      +.++.+||+|||++.........  ..++..|+|||++.+..++.++|||||||++|||+| |.+||.+.+..+....+.
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  237 (303)
T cd05088         158 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  237 (303)
T ss_pred             cCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence            67788999999998643222122  223567999999988889999999999999999998 999998877655544331


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      ...  .+.                                 .+                           ......+.+|
T Consensus       238 ~~~--~~~---------------------------------~~---------------------------~~~~~~~~~l  255 (303)
T cd05088         238 QGY--RLE---------------------------------KP---------------------------LNCDDEVYDL  255 (303)
T ss_pred             cCC--cCC---------------------------------CC---------------------------CCCCHHHHHH
Confidence            100  000                                 00                           0001157899


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~H  427 (437)
                      |.+||+.||++|||+++++++
T Consensus       256 i~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         256 MRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.5e-39  Score=301.91  Aligned_cols=245  Identities=21%  Similarity=0.300  Sum_probs=195.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.........+..|+.+++.+     .|+||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL-----SHPNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEEEEEEEEcCCCceEEE
Confidence            35889999999999999999875 466899999875444345666788877765     689999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .|++||||||+||++  +.++.+||+|||++.....
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~ni~i--~~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLES--NGFIHRDLAARNCLV--GEDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHhhEEE--CCCCcEEECCcccceeccc
Confidence            999965 7999887644 358999999999999999999995  489999999999999  6788899999999876543


Q ss_pred             ccc-ccc---ccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLY-QYI---QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~-~~~---gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ... ...   ++..|+|||++.+..++.++|+||||+++|+|++ |.+||.+.+..+....+......+.          
T Consensus       153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  222 (256)
T cd05059         153 DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR----------  222 (256)
T ss_pred             ccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCC----------
Confidence            221 112   2346999999999899999999999999999999 8999988776655544432111000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               |                           ......+.+++.+||..+|++|||+.+
T Consensus       223 -------------------------~---------------------------~~~~~~~~~li~~cl~~~p~~Rpt~~~  250 (256)
T cd05059         223 -------------------------P---------------------------KLAPTEVYTIMYSCWHEKPEDRPAFKK  250 (256)
T ss_pred             -------------------------C---------------------------CCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence                                     0                           000125789999999999999999999


Q ss_pred             HhcC
Q psy11727        424 VLRH  427 (437)
Q Consensus       424 ~l~H  427 (437)
                      +++.
T Consensus       251 ~l~~  254 (256)
T cd05059         251 LLSQ  254 (256)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.6e-38  Score=301.71  Aligned_cols=245  Identities=22%  Similarity=0.335  Sum_probs=195.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+..++ .||+|+++........+..|+.+++.+     .|+||+++++.+. .+..++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVS-EEPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC-----CCCCcceEEEEEC-CCCcEE
Confidence            467999999999999999999886654 599999975444445677788888776     6889999998775 456899


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||.+....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~Nill--~~~~~~~L~dfg~~~~~~  153 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV--GENLVCKVADFGLARLIE  153 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcccEEE--cCCCcEEeccCCceeecc
Confidence            9999965 89888876544458999999999999999999995  489999999999999  667889999999997654


Q ss_pred             Cccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....    ...++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.........+......+.         
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---------  224 (262)
T cd05071         154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC---------  224 (262)
T ss_pred             ccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCC---------
Confidence            3322    2334567999999998899999999999999999999 8999988776555544422110000         


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                           +......+.+||.+||+.||.+|||+.
T Consensus       225 -----------------------------------------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~  251 (262)
T cd05071         225 -----------------------------------------------------PPECPESLHDLMCQCWRKEPEERPTFE  251 (262)
T ss_pred             -----------------------------------------------------ccccCHHHHHHHHHHccCCcccCCCHH
Confidence                                                                 000112578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       252 ~~~~  255 (262)
T cd05071         252 YLQA  255 (262)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.5e-38  Score=300.44  Aligned_cols=199  Identities=26%  Similarity=0.452  Sum_probs=167.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+.....    ....+..|+.+++.+     .||||+++++++.+.+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-----NHPNVIKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-----CCcceeeeeeeEEECCe
Confidence            579999999999999999999999999999998753221    122345577766665     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        186 LCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .++||||+++ +|.+++...  ....+++..+..++.||+.||+|||+  .|++|+||||+||++  +.++.++|+|||+
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~nil~--~~~~~~~l~d~g~  152 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS--RRVMHRDIKPANVFI--TATGVVKLGDLGL  152 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCCHHHEEE--cCCCCEEECcccc
Confidence            9999999975 788777532  22347899999999999999999995  489999999999999  6678899999999


Q ss_pred             ceecCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        263 SCHVGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       263 s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.......   ....++..|+|||++.+..++.++|+||||+++|+|++|+.||....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         153 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence            87664322   23467889999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=9e-39  Score=301.07  Aligned_cols=198  Identities=23%  Similarity=0.374  Sum_probs=162.6

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      +.||+|+||.||+|.+..+++.||+|.+....  .....+..|+.+++.+     .|+||+++++++...+..++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeec
Confidence            46899999999999999999999999886332  2234566777777665     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ  272 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~  272 (437)
                      ++ +|.+++.... ..+++..++.++.|++.||+|||+  .|++||||||+|||+  +.++.+||+|||++.........
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~--~~~~~~kl~dfg~~~~~~~~~~~  150 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLES--KHCIHRDLAARNCLV--TEKNVLKISDFGMSREEEDGVYA  150 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEE--cCCCcEEECccccCccccccccc
Confidence            65 7888886543 358999999999999999999995  489999999999999  66788999999998754432211


Q ss_pred             c-----cccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy11727        273 Y-----IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMT  323 (437)
Q Consensus       273 ~-----~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~  323 (437)
                      .     ..+..|+|||.+.+..++.++|+|||||++|+|++ |.+||..........
T Consensus       151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence            1     12346999999998899999999999999999998 899998766544433

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.3e-38  Score=300.03  Aligned_cols=245  Identities=23%  Similarity=0.341  Sum_probs=195.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|.+.+.||+|+||+||+|.+..++ .+|+|.+.........+..|+.+++.+     .|++++++++++. .+..++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL-----RHDKLVPLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC-----CCCCeeeEEEEEc-CCCcEE
Confidence            467999999999999999999876654 699999875544445677788888776     6889999998875 466899


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.|++.||+|||+  .|++|+||||+||++  ++++.++|+|||++....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dl~~~Nill--~~~~~~~l~dfg~~~~~~  153 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER--MNYIHRDLRAANILV--GDNLVCKIADFGLARLIE  153 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEE--cCCCeEEECCCccceEcc
Confidence            9999965 89999876544458999999999999999999995  489999999999999  678889999999997654


Q ss_pred             Cccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....    ...++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+....+....+......+.         
T Consensus       154 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------  224 (260)
T cd05069         154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPC---------  224 (260)
T ss_pred             CCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---------
Confidence            3221    2234567999999998899999999999999999999 9999998776665555432111000         


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                           +......+.+|+++||..||.+|||++
T Consensus       225 -----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~  251 (260)
T cd05069         225 -----------------------------------------------------PQGCPESLHELMKLCWKKDPDERPTFE  251 (260)
T ss_pred             -----------------------------------------------------CcccCHHHHHHHHHHccCCcccCcCHH
Confidence                                                                 000012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       252 ~i~~  255 (260)
T cd05069         252 YIQS  255 (260)
T ss_pred             HHHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.3e-38  Score=306.38  Aligned_cols=246  Identities=25%  Similarity=0.345  Sum_probs=195.0

Q ss_pred             cCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|.+.+.||+|+||+||++.+     ..++..+|+|.+.... .....+..|+.++..+     .|+||+++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecC
Confidence            4689999999999999999975     3356679999987433 2234566777777765     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN-----------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~-----------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      +.+++||||+++ +|.+++....           ...+++..+..++.||+.||+|||+  .|++||||||+|||+  ++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--~~i~H~dlkp~Nili--~~  155 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCLV--GE  155 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEE--cc
Confidence            999999999965 8888886542           1248999999999999999999995  489999999999999  67


Q ss_pred             CCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      ++.++|+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.+..+....+
T Consensus       156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i  235 (288)
T cd05093         156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI  235 (288)
T ss_pred             CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            8889999999987553221     12334668999999999899999999999999999998 99999888776665555


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      ......+.                                   +                        .   .....+.+
T Consensus       236 ~~~~~~~~-----------------------------------~------------------------~---~~~~~l~~  253 (288)
T cd05093         236 TQGRVLQR-----------------------------------P------------------------R---TCPKEVYD  253 (288)
T ss_pred             HcCCcCCC-----------------------------------C------------------------C---CCCHHHHH
Confidence            33110000                                   0                        0   00015799


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q psy11727        406 LILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~  426 (437)
                      |+.+||+.||.+|||+++++.
T Consensus       254 li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         254 LMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-38  Score=296.31  Aligned_cols=247  Identities=29%  Similarity=0.491  Sum_probs=201.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|++|.||++.+..+++.||+|.+.....   ....+..|+.++..+     .|+|++++++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-----KHPNIVKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-----CCCCccEEEEEEEeCCEEE
Confidence            58899999999999999999999999999999975542   334556677766665     6889999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|||++++ +|.+++...  ..+++..+..++.|++.||.+||+  .||+||||+|+||++  +.++.++|+|||.+...
T Consensus        76 ~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i--~~~~~~~l~d~~~~~~~  149 (254)
T cd06627          76 IILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHE--QGVIHRDIKAANILT--TKDGVVKLADFGVATKL  149 (254)
T ss_pred             EEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEE--CCCCCEEEeccccceec
Confidence            99999976 888888765  458999999999999999999995  489999999999999  56788999999999776


Q ss_pred             CCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....   ....++..|+|||...+..++.++|+||||+++|+|++|.+||...+.......+.... .++          
T Consensus       150 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~----------  218 (254)
T cd06627         150 NDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD-HPP----------  218 (254)
T ss_pred             CCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC-CCC----------
Confidence            4433   23567889999999988888999999999999999999999998766544433332100 000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                              .                           +......+.++|.+||..+|++|||+.+
T Consensus       219 ------------------------~---------------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~  247 (254)
T cd06627         219 ------------------------L---------------------------PEGISPELKDFLMQCFQKDPNLRPTAKQ  247 (254)
T ss_pred             ------------------------C---------------------------CCCCCHHHHHHHHHHHhCChhhCcCHHH
Confidence                                    0                           0000125789999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      ++.||||
T Consensus       248 ~l~~~~~  254 (254)
T cd06627         248 LLKHPWI  254 (254)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.4e-38  Score=309.37  Aligned_cols=254  Identities=26%  Similarity=0.359  Sum_probs=201.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ...|...+.||+|+||+||+|++..++..+|+|.+.....    ....+..|+.+++.+     .|+|++++.+++...+
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   88 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLREH   88 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCcccEEEEEEcCC
Confidence            3458888999999999999999999999999999863211    122344566666655     7899999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ..++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+  .|++||||+|+||++  +.++.++|+|||++.
T Consensus        89 ~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nil~--~~~~~~kl~dfg~~~  163 (308)
T cd06634          89 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILL--SEPGLVKLGDFGSAS  163 (308)
T ss_pred             eeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHhEEE--CCCCcEEECCcccce
Confidence            999999999988888776543 458999999999999999999995  489999999999999  667889999999987


Q ss_pred             ecCCccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..... ....++..|+|||++.   ...++.++|||||||++|+|++|..||...+..+....+..... |. ..     
T Consensus       164 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~-~~-----  235 (308)
T cd06634         164 IMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PA-LQ-----  235 (308)
T ss_pred             eecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-CC-cC-----
Confidence            65433 3456888999999985   34678899999999999999999999987665544443322100 00 00     


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                            .......+.+||.+||+.+|.+|||+
T Consensus       236 ------------------------------------------------------~~~~~~~~~~li~~cl~~~P~~Rp~~  261 (308)
T cd06634         236 ------------------------------------------------------SGHWSEYFRNFVDSCLQKIPQDRPTS  261 (308)
T ss_pred             ------------------------------------------------------cccccHHHHHHHHHHhhCCcccCCCH
Confidence                                                                  00001257899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      ++++.|||+....
T Consensus       262 ~~ll~~~~~~~~~  274 (308)
T cd06634         262 EVLLKHRFVLRER  274 (308)
T ss_pred             HHHhhCccccccC
Confidence            9999999997754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.2e-38  Score=304.77  Aligned_cols=249  Identities=23%  Similarity=0.332  Sum_probs=192.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ..++|++.+.||+|+||+||+|.+.     .++..||+|.+.....  ....+..|+.++..+     .|+||+++++++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~   78 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLGVV   78 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            3578999999999999999999764     2456799999863321  122345566666554     789999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTN--------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~--------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      ......++||||+++ +|.+++....        ...+++..+..++.|++.||+|||+  .|++||||||+||++  ++
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~vH~dlkp~Nil~--~~  154 (277)
T cd05062          79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMV--AE  154 (277)
T ss_pred             cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCcchheEEE--cC
Confidence            999999999999965 8888886532        1235778889999999999999995  489999999999999  67


Q ss_pred             CCCEEEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      ++.++|+|||++........     ...++..|+|||++.+..++.++|+|||||++|||++ |.+||.+.+.......+
T Consensus       155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (277)
T cd05062         155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV  234 (277)
T ss_pred             CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            88899999999865432211     1234677999999999899999999999999999999 78999887776555544


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      .+.. .++.                                  +                           ......+.+
T Consensus       235 ~~~~-~~~~----------------------------------~---------------------------~~~~~~~~~  252 (277)
T cd05062         235 MEGG-LLDK----------------------------------P---------------------------DNCPDMLFE  252 (277)
T ss_pred             HcCC-cCCC----------------------------------C---------------------------CCCCHHHHH
Confidence            3210 0000                                  0                           000115789


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q psy11727        406 LILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ||.+||+.||.+|||+.|++++
T Consensus       253 li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         253 LMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.4e-38  Score=304.34  Aligned_cols=250  Identities=21%  Similarity=0.307  Sum_probs=193.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.+......  ...+..|+.++..+     .|+||+++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-----NHQNIVRLIGVSF   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEc
Confidence            4679999999999999999999877     7789999988633211  22345566666554     7899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNF-----HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSA  254 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~-----~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~  254 (437)
                      +.+..++||||+. ++|.+++.....     ..+++..+..++.||+.||+|||++  |++||||||+||+++... ...
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~dlkp~nil~~~~~~~~~  157 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN--HFIHRDIAARNCLLTCKGPGRV  157 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CEeecccchheEEEeccCCCcc
Confidence            9999999999995 489988866431     2489999999999999999999964  799999999999995322 236


Q ss_pred             EEEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||++........     ....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~  237 (277)
T cd05036         158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG  237 (277)
T ss_pred             eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999976532221     1223457999999998899999999999999999997 99999987765554433221


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      .....                                   |                           ......+.+++.
T Consensus       238 ~~~~~-----------------------------------~---------------------------~~~~~~~~~~i~  255 (277)
T cd05036         238 GRLDP-----------------------------------P---------------------------KGCPGPVYRIMT  255 (277)
T ss_pred             CcCCC-----------------------------------C---------------------------CCCCHHHHHHHH
Confidence            00000                                   0                           000115789999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q psy11727        409 RMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~H  427 (437)
                      +||+.||++|||+.++++|
T Consensus       256 ~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         256 DCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0668|consensus

Probab=100.00  E-value=5.3e-40  Score=289.00  Aligned_cols=285  Identities=27%  Similarity=0.490  Sum_probs=219.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~~  186 (437)
                      .++|++.+++|+|.|++||.|.+..+++.++||+++.-+  .+.+.+|+.+++.+.    .||||+++++...+.  ...
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~----gg~NIi~L~DiV~Dp~Sktp  110 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLR----GGPNIIKLLDIVKDPESKTP  110 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhcc----CCCCeeehhhhhcCccccCc
Confidence            578999999999999999999999999999999997433  477889999999886    689999999998865  478


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      .||+|++.+.-+..+-    ..++.-.++.++.+++.||.|+|+  +||+|||+||.|++++. ..-.++|+|+|+|...
T Consensus       111 aLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS--~GImHRDVKPhNvmIdh-~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  111 SLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHS--MGIMHRDVKPHNVMIDH-ELRKLRLIDWGLAEFY  183 (338)
T ss_pred             hhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHh--cCcccccCCcceeeech-hhceeeeeecchHhhc
Confidence            8999999875444332    347888999999999999999995  59999999999999963 4456999999999765


Q ss_pred             C--CccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 G--QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .  ....-.+.|+.|--||.+... .|+.+.|+|||||++..|+..+ |-|.|.+..+++-+|.+.+|.-.  +.     
T Consensus       184 Hp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e--l~-----  256 (338)
T KOG0668|consen  184 HPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE--LY-----  256 (338)
T ss_pred             CCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH--HH-----
Confidence            3  333335678999999999764 5899999999999999999976 55689999999999999888431  11     


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                        .|.                .++.+...+.+.+|++.....|-.+.-...+.. -...+..|||.++|.+|..+|+||+
T Consensus       257 --~Yl----------------~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~h-l~~peaiDlldklLrYDHqeRlTak  317 (338)
T KOG0668|consen  257 --AYL----------------NKYQIDLDPQFEDILGRHSRKPWSRFINSENQH-LVSPEAIDLLDKLLRYDHQERLTAK  317 (338)
T ss_pred             --HHH----------------HHHccCCChhHhhHhhccccccHHHhCCccccc-cCChHHHHHHHHHHhhccccccchH
Confidence              111                112222233344455444433332222111111 1123568999999999999999999


Q ss_pred             HHhcCCCcCc
Q psy11727        423 NVLRHEFFLK  432 (437)
Q Consensus       423 e~l~Hp~~~~  432 (437)
                      ||+.||||..
T Consensus       318 Eam~HpyF~~  327 (338)
T KOG0668|consen  318 EAMAHPYFAP  327 (338)
T ss_pred             HHhcCchHHH
Confidence            9999999975

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=7.1e-39  Score=303.22  Aligned_cols=246  Identities=23%  Similarity=0.357  Sum_probs=200.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+|++.+.||.|+||.||+|.+.. +..+|+|++..... ....+..|+.++..+     .|+||+++++++.+.+..+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL-----RHKHLISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC-----CCcchhheeeeEecCCCeE
Confidence            4579999999999999999999877 88999999875433 244566677766655     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..+..++.||+.||.|||+  .||+|+||||+||++  +.++.+||+|||.+...
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~h~dl~~~nilv--~~~~~~kl~d~g~~~~~  154 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE--QNSIHRDLAARNILV--GEDLVCKVADFGLARLI  154 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccCcceEEE--cCCceEEEccccchhhc
Confidence            99999965 89999987655568999999999999999999995  489999999999999  66788999999999765


Q ss_pred             CCccc---cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQTLY---QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .....   ...++..|+|||++.+..++.++|+||||+++|+|++ |++||.+.+..+.+..+......+..        
T Consensus       155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  226 (261)
T cd05148         155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCP--------  226 (261)
T ss_pred             CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCC--------
Confidence            43322   2234567999999998899999999999999999998 89999988876666665432111100        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                            ......+.++|.+||+.||.+|||+.
T Consensus       227 ------------------------------------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~  252 (261)
T cd05148         227 ------------------------------------------------------AKCPQEIYKIMLECWAAEPEDRPSFK  252 (261)
T ss_pred             ------------------------------------------------------CCCCHHHHHHHHHHcCCCchhCcCHH
Confidence                                                                  00012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05148         253 ALRE  256 (261)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-38  Score=298.37  Aligned_cols=246  Identities=24%  Similarity=0.338  Sum_probs=200.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|.+.+.||+|+||.||+|.+. ++..||||.+.........+..|+.+++.+     .|+||+++++++......++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-----RHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC-----CCCCEeeeeeeeecCCceEE
Confidence            568999999999999999999875 457799999986555556777888888776     68999999999998899999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||++.+ +|.+++.......+++..+..++.||+.||.|||.  .|++|+||||+||++  +.++.++|+|||++....
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~--~~i~h~di~p~nili--~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES--RNYIHRDLAARNILV--GENLVCKIADFGLARLIE  154 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcchheEEE--cCCCCEEECccccceecc
Confidence            9999965 89998877654568999999999999999999995  489999999999999  667889999999987664


Q ss_pred             Cccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....    ...++..|+|||.+.+..++.++|+|||||++|+|++ |++||.+.+....+..+......+..        
T Consensus       155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  226 (261)
T cd05034         155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP--------  226 (261)
T ss_pred             chhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            3221    1223467999999998889999999999999999999 99999988776666665432111100        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                        ..    ....+.+++.+||+.||.+|||++
T Consensus       227 --------------------------------------------------~~----~~~~~~~~i~~~l~~~p~~Rp~~~  252 (261)
T cd05034         227 --------------------------------------------------PN----CPEELYDLMLQCWDKDPEERPTFE  252 (261)
T ss_pred             --------------------------------------------------CC----CCHHHHHHHHHHcccCcccCCCHH
Confidence                                                              00    012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05034         253 YLQS  256 (261)
T ss_pred             HHHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=6e-39  Score=316.04  Aligned_cols=249  Identities=24%  Similarity=0.374  Sum_probs=189.6

Q ss_pred             cCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ++|++.+.||+|+||.||+|...     .+++.||+|+++....  .......|+.++..+.    .|+||+++++++..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~----~h~niv~~~~~~~~   82 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG----HHLNVVNLLGACTK   82 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc----cCcchhheeeeEec
Confidence            58999999999999999999743     3457899999864321  1234556777776663    68999999998865


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcC-------------------------------------------------------
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTN-------------------------------------------------------  205 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~-------------------------------------------------------  205 (437)
                       ...++++|||+++ +|.+++....                                                       
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence             4578999999965 8888875422                                                       


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc-----cccccc
Q psy11727        206 ----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQS  276 (437)
Q Consensus       206 ----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt  276 (437)
                          ...+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.++|+|||++.......     ....++
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~~ivHrDikp~Nill--~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~  238 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLAS--RKCIHRDLAARNILL--SENNVVKICDFGLARDIYKDPDYVRKGDARLP  238 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEE--eCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence                1257899999999999999999995  489999999999999  567889999999997653211     123446


Q ss_pred             ccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcc
Q psy11727        277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSY  355 (437)
Q Consensus       277 ~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  355 (437)
                      ..|+|||++.+..++.++|||||||++|||++ |.+||.+....+.+.........+.                      
T Consensus       239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------  296 (337)
T cd05054         239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR----------------------  296 (337)
T ss_pred             ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC----------------------
Confidence            67999999999999999999999999999998 9999987554333322221100000                      


Q ss_pred             eeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        356 VLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                                  .|                           ......+.+++.+||+.+|++|||+.|+++|
T Consensus       297 ------------~~---------------------------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         297 ------------AP---------------------------EYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ------------CC---------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                        00                           0001257899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.9e-38  Score=304.38  Aligned_cols=247  Identities=22%  Similarity=0.310  Sum_probs=193.5

Q ss_pred             cCeeeeceecccCceEEEEEEE----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFD----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|++.+.||+|+||+||+|.+    ..++..||+|.+.....  ....+..|+.+++.+     .|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-----HHPNIVCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCCeeeEEEEEecC
Confidence            5789999999999999999985    34567899999874322  223456677777765     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN---------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~---------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      +..|+||||+++ +|.+++....               ...+++..+..++.||+.||+|||+  .|++||||||+|||+
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~nili  157 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS--HFFVHKDLAARNILI  157 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--cCeehhccccceEEE
Confidence            999999999965 8888875321               1247888999999999999999995  489999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQ  321 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~  321 (437)
                        +.++.+||+|||++......     .....++..|+|||++.+..++.++|+|||||++|||++ |.+||.+.+..+.
T Consensus       158 --~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~  235 (283)
T cd05090         158 --GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV  235 (283)
T ss_pred             --cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence              66778999999999765322     122344667999999998889999999999999999998 9999988776555


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+......+.                                                              +.....
T Consensus       236 ~~~~~~~~~~~~--------------------------------------------------------------~~~~~~  253 (283)
T cd05090         236 IEMVRKRQLLPC--------------------------------------------------------------SEDCPP  253 (283)
T ss_pred             HHHHHcCCcCCC--------------------------------------------------------------CCCCCH
Confidence            444432110000                                                              000012


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      .+.+++.+||+.||.+||++.+++++
T Consensus       254 ~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         254 RMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHH
Confidence            57899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-38  Score=298.78  Aligned_cols=245  Identities=20%  Similarity=0.293  Sum_probs=198.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||.||+|..  .|+.||+|.+........++..|+.++..+     .|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTL-----RHPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhc-----CCcceeeeEEEEcCCCCeEE
Confidence            35789999999999999999976  478899999975544345666777777766     68899999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.|++.||.|||++  |++|+||||+||++  +.++.++|+|||.+....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~--~i~H~di~p~Nili--~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK--NFVHRDLAARNVLV--SEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CccchhcccceEEE--eCCCCEEEcccccccccc
Confidence            9999975 899998776545689999999999999999999954  89999999999999  678889999999997765


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                      ........+..|+|||++.+..++.++|+||||+++|+|++ |..||...+..+....+.....  +.            
T Consensus       154 ~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~------------  219 (256)
T cd05039         154 QGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR--ME------------  219 (256)
T ss_pred             cccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--CC------------
Confidence            44333444667999999998889999999999999999997 9999988766554443322100  00            


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                         .+                                             ......+.+||.+||..+|.+|||+.++++
T Consensus       220 ---~~---------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         220 ---AP---------------------------------------------EGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             ---Cc---------------------------------------------cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence               00                                             000125789999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.7e-38  Score=298.72  Aligned_cols=243  Identities=21%  Similarity=0.294  Sum_probs=194.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceee-ECCEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT-WKNHLCL  188 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~-~~~~~~l  188 (437)
                      .+|++.+.||+|+||.||++..  .+..||+|.++.. .....+..|+.++..+     .|++++++++++. ..+..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-chHHHHHHHHHHHHhC-----CCCCeeeEEEEEEcCCCceEE
Confidence            5789999999999999999975  4678999998643 2344566787777766     6889999998754 5568999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.||+.||+|||++  |++||||||+||++  ++++.+||+|||++....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~nil~--~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN--NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CEeccccchheEEE--cCCCcEEecCCccceecc
Confidence            9999965 899998776545589999999999999999999964  89999999999999  678889999999987665


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                      .......++..|+|||++.+..++.++|||||||++|+|++ |++||...+..+....+....  ++.            
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~------------  219 (256)
T cd05082         154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KMD------------  219 (256)
T ss_pred             ccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CCC------------
Confidence            44444455678999999999899999999999999999998 999998776655444432210  000            


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                         ..                                             ......+.++|.+||+.||.+|||+.++++
T Consensus       220 ---~~---------------------------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         220 ---AP---------------------------------------------DGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             ---CC---------------------------------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence               00                                             000125789999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=4.2e-38  Score=296.53  Aligned_cols=249  Identities=28%  Similarity=0.368  Sum_probs=199.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+.....   .......|+.+++.+     .|+||+++.+++.+....+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-----NHPNIISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-----CCCCchhhhhhhccCCEEE
Confidence            58899999999999999999999999999999864321   122334455555544     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        188 LVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +||||+++ +|.+++...  ....+++..+..++.|++.||+|||+  .|++|+||+|+||++  +.++.+||+|||++.
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~--~~i~h~~l~~~ni~~--~~~~~~kl~d~g~~~  151 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE--QKILHRDLKSANILL--VANDLVKIGDLGISK  151 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEE--ecCCcEEEeeccchh
Confidence            99999966 788887652  22458999999999999999999995  489999999999999  457789999999987


Q ss_pred             ecCCcc-ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        265 HVGQTL-YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       265 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...... ....++..|+|||.+.+..++.++|+||||+++++|++|+.||...+..+....+......+.          
T Consensus       152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  221 (256)
T cd08530         152 VLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPI----------  221 (256)
T ss_pred             hhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----------
Confidence            654432 234578899999999998999999999999999999999999998776554443322100000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                          +......+.++|.+||..+|.+|||+.+
T Consensus       222 ----------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (256)
T cd08530         222 ----------------------------------------------------PPIYSQDLQNFIRSMLQVKPKLRPNCDK  249 (256)
T ss_pred             ----------------------------------------------------chhhCHHHHHHHHHHcCCCcccCCCHHH
Confidence                                                                0011125799999999999999999999


Q ss_pred             HhcCCCc
Q psy11727        424 VLRHEFF  430 (437)
Q Consensus       424 ~l~Hp~~  430 (437)
                      +++||++
T Consensus       250 ~l~~p~~  256 (256)
T cd08530         250 ILASPAV  256 (256)
T ss_pred             HhcCCCC
Confidence            9999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.4e-38  Score=337.10  Aligned_cols=200  Identities=25%  Similarity=0.386  Sum_probs=168.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.++||+|+||.||+|++..+++.||+|+++....    ...++.+|+.++..+     .||||+++++++.+.+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-----~HPNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-----IHPGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-----CCcCcCeEEEEEeeCCE
Confidence            689999999999999999999999999999999974321    233456677777665     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        186 LCLVFELLSY-NLYNLIRNTN---------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~---------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      .++||||++| +|.+++....         ...+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~--GIIHRDLKPeNILL--d~dg~v  152 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK--GVLHRDLKPDNILL--GLFGEV  152 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC--CccccCCchheEEE--cCCCCE
Confidence            9999999965 8888876421         12356778889999999999999964  89999999999999  678889


Q ss_pred             EEEeCCCceecCCc---------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        256 KIIDFGSSCHVGQT---------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       256 kL~DFG~s~~~~~~---------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      +|+|||++......                     ....+||+.|+|||++.+..++.++|||||||++|||+||++||.
T Consensus       153 KLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~  232 (932)
T PRK13184        153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR  232 (932)
T ss_pred             EEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            99999999755110                     112468999999999999999999999999999999999999998


Q ss_pred             CCCH
Q psy11727        315 GKNE  318 (437)
Q Consensus       315 ~~~~  318 (437)
                      +...
T Consensus       233 ~~~~  236 (932)
T PRK13184        233 RKKG  236 (932)
T ss_pred             Ccch
Confidence            7544

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.2e-38  Score=310.87  Aligned_cols=245  Identities=21%  Similarity=0.307  Sum_probs=189.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeE----EEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQ----VAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|++.+.||+|+||+||+|.+..++..    ||+|+++...  ....++..|+.++..+     .|+||+++++++...
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~g~~~~~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLTS   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEcCC
Confidence            5799999999999999999988766654    8999986432  2234455666666655     789999999988764


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                       ..++|+|++. |+|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~--~iiH~dlkp~Nill--~~~~~~kl~DfG~  155 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER--RLVHRDLAARNVLV--KTPQHVKITDFGL  155 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc--CeeccccchhheEe--cCCCcEEEccccc
Confidence             5679999995 48999887654 3588999999999999999999964  89999999999999  6678899999999


Q ss_pred             ceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        263 SCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       263 s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +........     ...++..|+|||++.+..++.++|||||||++|||++ |.+||.+....+... +......++.  
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~--  232 (316)
T cd05108         156 AKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQ--  232 (316)
T ss_pred             cccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCCC--
Confidence            976543221     1223567999999999999999999999999999998 999998876554332 2221100000  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                      +                       +    .....+.+++.+||..||.
T Consensus       233 --------------------------------~-----------------------~----~~~~~~~~li~~cl~~~p~  253 (316)
T cd05108         233 --------------------------------P-----------------------P----ICTIDVYMIMVKCWMIDAD  253 (316)
T ss_pred             --------------------------------C-----------------------C----CCCHHHHHHHHHHccCChh
Confidence                                            0                       0    0001578999999999999


Q ss_pred             CCCCHHHHhcC
Q psy11727        417 KRISPTNVLRH  427 (437)
Q Consensus       417 ~R~t~~e~l~H  427 (437)
                      +|||+.+++.+
T Consensus       254 ~Rps~~~l~~~  264 (316)
T cd05108         254 SRPKFRELIIE  264 (316)
T ss_pred             hCcCHHHHHHH
Confidence            99999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4.4e-38  Score=296.71  Aligned_cols=241  Identities=25%  Similarity=0.361  Sum_probs=195.5

Q ss_pred             ceecccCceEEEEEEEcCC---CeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      +.||+|+||.||+|.+...   +..||+|++......  ...+..|+.++..+     .|+||+++++++.....+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-----GHPNVVRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-----CCCChheeeeeecCCCceEEEE
Confidence            4689999999999998866   889999999754332  34566677777665     5899999999999999999999


Q ss_pred             Eec-cCcHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        191 ELL-SYNLYNLIRNTN-------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       191 E~~-~~~L~~~l~~~~-------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ||+ +++|.+++....       ...+++..++.++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||.
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~nili--~~~~~~~l~dfg~  151 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFVHRDLAARNCLV--GEDLVVKISDFGL  151 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc--CCcccCccCcceEEE--CCCCcEEEccccc
Confidence            999 568999887652       2568999999999999999999996  489999999999999  6778999999999


Q ss_pred             ceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        263 SCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       263 s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +......     .....++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+....+....+......+.   
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---  228 (262)
T cd00192         152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPK---  228 (262)
T ss_pred             ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC---
Confidence            9766443     233456788999999998889999999999999999999 6999998877666555543100000   


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                      |                           ......+.++|.+||..||.
T Consensus       229 --------------------------------~---------------------------~~~~~~~~~li~~~l~~~p~  249 (262)
T cd00192         229 --------------------------------P---------------------------EYCPDELYELMLSCWQLDPE  249 (262)
T ss_pred             --------------------------------C---------------------------ccCChHHHHHHHHHccCCcc
Confidence                                            0                           00012678999999999999


Q ss_pred             CCCCHHHHhcC
Q psy11727        417 KRISPTNVLRH  427 (437)
Q Consensus       417 ~R~t~~e~l~H  427 (437)
                      +|||+.|+++|
T Consensus       250 ~Rps~~~l~~~  260 (262)
T cd00192         250 DRPTFSELVER  260 (262)
T ss_pred             cCcCHHHHHHh
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-38  Score=296.54  Aligned_cols=248  Identities=25%  Similarity=0.456  Sum_probs=196.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+....      .....+..|+.+++.+     .|+||+++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-----RHDRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-----CCCCcceEEEEEEcC
Confidence            47999999999999999999999999999999875321      1223455677777766     688999999998764


Q ss_pred             --CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 --NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 --~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                        ..+++||||+++ +|.+++....  .+++..+..++.||+.||.|||++  |++|+||||+||++  +.++.++|+||
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~--~i~H~dl~p~ni~i--~~~~~~~l~df  150 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSN--MIVHRDIKGANILR--DSAGNVKLGDF  150 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEE--cCCCCEEECcc
Confidence              578999999965 7888887643  488999999999999999999954  89999999999999  66788999999


Q ss_pred             CCceecCC------ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        261 GSSCHVGQ------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       261 G~s~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |++.....      ......++..|+|||++.+..++.++|+|||||++|+|++|++||..........++   ...+..
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~  227 (264)
T cd06653         151 GASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKI---ATQPTK  227 (264)
T ss_pred             ccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHH---HcCCCC
Confidence            99875432      112356788999999999988999999999999999999999999876554433332   222211


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ...+                                                          ......+.++|++||. +
T Consensus       228 ~~~p----------------------------------------------------------~~~~~~~~~~i~~~l~-~  248 (264)
T cd06653         228 PMLP----------------------------------------------------------DGVSDACRDFLKQIFV-E  248 (264)
T ss_pred             CCCC----------------------------------------------------------cccCHHHHHHHHHHhc-C
Confidence            1110                                                          0011257899999999 5


Q ss_pred             CCCCCCHHHHhcCCCc
Q psy11727        415 PKKRISPTNVLRHEFF  430 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~  430 (437)
                      |..|||+.+++.|||.
T Consensus       249 ~~~r~~~~~~~~~~~~  264 (264)
T cd06653         249 EKRRPTAEFLLRHPFV  264 (264)
T ss_pred             cccCccHHHHhcCCCC
Confidence            7999999999999994

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG4721|consensus

Probab=100.00  E-value=5.6e-40  Score=320.43  Aligned_cols=235  Identities=27%  Similarity=0.438  Sum_probs=191.1

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      -++.||.|+-|.||+|+.  .++.||||.++      ..-..++.-|++|     .|+||+.+.|+|...-.+|||||||
T Consensus       128 ELeWlGSGaQGAVF~Grl--~netVAVKKV~------elkETdIKHLRkL-----kH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRL--HNETVAVKKVR------ELKETDIKHLRKL-----KHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhccCcccceeeeec--cCceehhHHHh------hhhhhhHHHHHhc-----cCcceeeEeeeecCCceeEEeeecc
Confidence            467899999999999975  46789999886      3334566667766     8899999999999999999999999


Q ss_pred             c-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc--c
Q psy11727        194 S-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--L  270 (437)
Q Consensus       194 ~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~--~  270 (437)
                      . |-|+..|+..+  .++......|..+|+.++.|||.|+  |||||||.-||||+  .+..|||+|||.+....+.  .
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs--~~d~VKIsDFGTS~e~~~~STk  268 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILIS--YDDVVKISDFGTSKELSDKSTK  268 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEee--ccceEEeccccchHhhhhhhhh
Confidence            5 57999998764  5889999999999999999999884  99999999999995  4557999999999876544  3


Q ss_pred             ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhccc
Q psy11727        271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL  350 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~  350 (437)
                      ..++||..|||||+|...+.+.|+|||||||+|||||||..||...+...+    +.+.|                    
T Consensus       269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwGVG--------------------  324 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWGVG--------------------  324 (904)
T ss_pred             hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----EEecc--------------------
Confidence            468999999999999999999999999999999999999999987653211    11111                    


Q ss_pred             CCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCC
Q psy11727        351 SDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHE  428 (437)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp  428 (437)
                       .+.                   |.  |.+....|+               -|+=||++||+-.|..|||..++|.|=
T Consensus       325 -sNs-------------------L~--LpvPstcP~---------------GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  325 -SNS-------------------LH--LPVPSTCPD---------------GFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             -CCc-------------------cc--ccCcccCch---------------HHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence             000                   00  111112233               478899999999999999999999983

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=4e-38  Score=335.51  Aligned_cols=145  Identities=28%  Similarity=0.431  Sum_probs=124.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||||+++....    ....+..|+.++..+     .|+||+++++++...+
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~~   77 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-----KSPFIVHLYYSLQSAN   77 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-----CCCCcCeEEEEEEECC
Confidence            4689999999999999999999999999999999974322    123455566666554     7899999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++||||||+. ++|.+++....  .+++..++.++.||+.||.|||.+  |||||||||+|||+  +.++.+||+|||++
T Consensus        78 ~~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~--gIiHrDLKP~NILl--~~~g~vkL~DFGls  151 (669)
T cd05610          78 NVYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRH--GIIHRDLKPDNMLI--SNEGHIKLTDFGLS  151 (669)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CEEeCCccHHHEEE--cCCCCEEEEeCCCC
Confidence            9999999995 48988887643  488999999999999999999964  89999999999999  66788999999986


Q ss_pred             e
Q psy11727        264 C  264 (437)
Q Consensus       264 ~  264 (437)
                      .
T Consensus       152 ~  152 (669)
T cd05610         152 K  152 (669)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.4e-38  Score=299.53  Aligned_cols=248  Identities=31%  Similarity=0.464  Sum_probs=193.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +|.+.+.||+|+||+||++.+..++..+++|+++...      ....+...|..++..+     .||||+++++++.+.+
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-----DHPAIVKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-----CCCcHHHHHHHHhcCC
Confidence            6899999999999999999998887777777765321      1112344455555544     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        185 HLCLVFELLSY-NLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ..++||||+++ +|.+++..  .....+++..++.++.|++.||.|||+  .|++|+||+|+||+++   ++.++|+|||
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~~l~~~nili~---~~~~~l~d~g  150 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ--RRILHRDLKAKNIFLK---NNLLKIGDFG  150 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH--cCccccCCChhheEee---cCCEeecccC
Confidence            99999999976 78777754  223458999999999999999999995  5899999999999994   3459999999


Q ss_pred             CceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ++......   .....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+.+.......+..  +.++..   
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~---  225 (260)
T cd08222         151 VSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GPTPSL---  225 (260)
T ss_pred             ceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CCCCCC---
Confidence            98665322   2234578899999999888899999999999999999999999987665544444322  111100   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                               +......+.++|.+||..||++|
T Consensus       226 ---------------------------------------------------------~~~~~~~~~~li~~~l~~~p~~R  248 (260)
T cd08222         226 ---------------------------------------------------------PETYSRQLNSIMQSMLNKDPSLR  248 (260)
T ss_pred             ---------------------------------------------------------cchhcHHHHHHHHHHhcCChhhC
Confidence                                                                     00001257899999999999999


Q ss_pred             CCHHHHhcCCCc
Q psy11727        419 ISPTNVLRHEFF  430 (437)
Q Consensus       419 ~t~~e~l~Hp~~  430 (437)
                      ||+.++++||||
T Consensus       249 p~~~~il~~~~~  260 (260)
T cd08222         249 PSAAEILRNPFI  260 (260)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.3e-38  Score=299.69  Aligned_cols=199  Identities=26%  Similarity=0.454  Sum_probs=167.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|.+.+.||+|+||.||+|.+..++..+|||.+.....    ....+..|+.++..+     .|+||+++++++...+.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-----cCCchhhhhheeEeCCe
Confidence            578999999999999999999999999999998864221    123455566666655     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        186 LCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .++||||+.+ +|.+++...  ....+++..++.++.||+.||+|||+  .|++|+||||+||++  +.++.++|+|||+
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili--~~~~~~~l~dfg~  152 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFI--TATGVVKLGDLGL  152 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEE--cCCCCEEECcchh
Confidence            9999999965 888887642  22458999999999999999999995  489999999999999  6788899999999


Q ss_pred             ceecCCcc---ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        263 SCHVGQTL---YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       263 s~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.......   ....++..|+|||++.+..++.++|+||||+++|+|++|..||.+..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         153 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             hhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence            87654322   23468889999999999899999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4.6e-38  Score=298.80  Aligned_cols=246  Identities=20%  Similarity=0.321  Sum_probs=194.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ++|++.+.||+|+||.||+|.+..+   ...||+|.++....  ....+..|+.++..+     .|+||+++++.+...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-----DHPNIIRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCcceEeEEEecCC
Confidence            5799999999999999999988644   45799999864322  123445566666655     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+  .||+||||||+|||+  ++++.++|+|||++
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~di~p~nili--~~~~~~~l~dfg~~  153 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSE--MNYVHRDLAARNILV--NSNLVCKVSDFGLS  153 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEE--cCCCCEEECccchh
Confidence            99999999965 8888887644 358999999999999999999995  589999999999999  67888999999999


Q ss_pred             eecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        264 CHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       264 ~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ........     ...++..|+|||.+.+..++.++||||||+++|+|++ |..||......+....+......|...  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--  231 (266)
T cd05033         154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPM--  231 (266)
T ss_pred             hcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCC--
Confidence            77642111     1223567999999998899999999999999999998 999998776655555443211111000  


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                                                  .....+.+|+.+||+.||++
T Consensus       232 ------------------------------------------------------------~~~~~l~~li~~cl~~~p~~  251 (266)
T cd05033         232 ------------------------------------------------------------DCPSALYQLMLDCWQKDRNE  251 (266)
T ss_pred             ------------------------------------------------------------CCCHHHHHHHHHHcCCCccc
Confidence                                                                        00125789999999999999


Q ss_pred             CCCHHHHhcC
Q psy11727        418 RISPTNVLRH  427 (437)
Q Consensus       418 R~t~~e~l~H  427 (437)
                      |||+.+++++
T Consensus       252 Rp~~~ei~~~  261 (266)
T cd05033         252 RPTFSQIVST  261 (266)
T ss_pred             CcCHHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-38  Score=300.71  Aligned_cols=247  Identities=23%  Similarity=0.353  Sum_probs=193.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-----CeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-----KCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+...     +..||+|.+......  ...+..|+.++..+     .|+||+++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~   79 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-----NCHHVVRLLGVVS   79 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEEc
Confidence            46899999999999999999987643     478999998643211  12344565555544     7899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTN--------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~--------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~  252 (437)
                      .....++||||++ ++|.+++....        ...+++..+..++.||+.||.|||+  .||+||||||+|||+  +.+
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~di~p~nill--~~~  155 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KKFVHRDLAARNCMV--AED  155 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccChheEEE--cCC
Confidence            9999999999996 58988886532        1236888999999999999999995  489999999999999  678


Q ss_pred             CCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        253 SAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      +.+||+|||++......     .....++..|+|||.+.+..++.++|||||||++||+++ |.+||.+.+..+....+.
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  235 (277)
T cd05032         156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI  235 (277)
T ss_pred             CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence            89999999998755322     122345678999999998889999999999999999998 999998877666555443


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .. +.++                                  .|..                           ....+.+|
T Consensus       236 ~~-~~~~----------------------------------~~~~---------------------------~~~~~~~l  253 (277)
T cd05032         236 DG-GHLD----------------------------------LPEN---------------------------CPDKLLEL  253 (277)
T ss_pred             cC-CCCC----------------------------------CCCC---------------------------CCHHHHHH
Confidence            11 0000                                  0000                           01257899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q psy11727        407 ILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~  426 (437)
                      |.+||+.+|.+|||+.++++
T Consensus       254 i~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         254 MRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=5.9e-38  Score=304.24  Aligned_cols=249  Identities=24%  Similarity=0.379  Sum_probs=195.1

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+     ..++..||+|+++....  ....+..|+.++..+.    .|+||+++++++.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~  109 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG----NHENIVNLLGACT  109 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc----CCCCcceEEEEEe
Confidence            46899999999999999999975     33456899999874321  1234566777777663    5899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      ..+..++||||++ ++|.+++.......+++..+..++.||+.||.|||++  ||+|+||||+|||+  +.++.++|+||
T Consensus       110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~ivH~dlkp~Nil~--~~~~~~~l~df  185 (302)
T cd05055         110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNVLL--THGKIVKICDF  185 (302)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CeehhhhccceEEE--cCCCeEEECCC
Confidence            9999999999996 5899988765444589999999999999999999964  79999999999999  66778999999


Q ss_pred             CCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        261 GSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       261 G~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |++........     ...++..|+|||++.+..++.++|||||||++|+|++ |.+||.+....+........ +.++.
T Consensus       186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~  264 (302)
T cd05055         186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE-GYRMA  264 (302)
T ss_pred             cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc-CCcCC
Confidence            99876533211     2234677999999999899999999999999999998 99999877654444333221 00000


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                                               .+.   .....+.+|+.+||+.+
T Consensus       265 ---------------------------------------------------------~~~---~~~~~~~~li~~cl~~~  284 (302)
T cd05055         265 ---------------------------------------------------------QPE---HAPAEIYDIMKTCWDAD  284 (302)
T ss_pred             ---------------------------------------------------------CCC---CCCHHHHHHHHHHcCCC
Confidence                                                                     000   00125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |++|||+.|+++
T Consensus       285 p~~Rpt~~ell~  296 (302)
T cd05055         285 PLKRPTFKQIVQ  296 (302)
T ss_pred             chhCcCHHHHHH
Confidence            999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.3e-38  Score=302.69  Aligned_cols=207  Identities=27%  Similarity=0.366  Sum_probs=169.4

Q ss_pred             cCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCccc-chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPF-LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~-~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|.+.+.||+|+||.||+|.+.     .++..+++|.+...... ...+.+|+.++..+     .|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-----QHEHIVKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-----CCCCcceEEEEEccC
Confidence            46899999999999999999753     34567999998644322 23466677776665     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      +..++||||+++ +|.+++....              ...+++..++.++.||+.||+|||+  .||+||||||+|||+ 
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~Nil~-  156 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS--QHFVHRDLATRNCLV-  156 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEEE-
Confidence            999999999965 8998886542              1347899999999999999999995  489999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                       +.++.++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|+| |.+||...+..+..
T Consensus       157 -~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~  235 (291)
T cd05094         157 -GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI  235 (291)
T ss_pred             -ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             678889999999997553321     22345778999999999999999999999999999999 99999887776655


Q ss_pred             HHH
Q psy11727        323 TKI  325 (437)
Q Consensus       323 ~~i  325 (437)
                      ..+
T Consensus       236 ~~~  238 (291)
T cd05094         236 ECI  238 (291)
T ss_pred             HHH
Confidence            443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-38  Score=294.94  Aligned_cols=239  Identities=35%  Similarity=0.533  Sum_probs=196.7

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ||+|+||.||++.+..+++.+|+|++.....    ....+..|+.+++.+     .|+||+++++.+..++..|+|||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-----NHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-----CCCcHHHHHHHeecCCeeEEEEecC
Confidence            6999999999999988899999999875432    233566677777766     5899999999999999999999999


Q ss_pred             -cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc---
Q psy11727        194 -SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---  269 (437)
Q Consensus       194 -~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~---  269 (437)
                       +++|.+++....  .+++..+..++.|++.||.|||+  .+++|+||+|+||++  +.++.++|+|||++......   
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~--~~~~H~~l~p~ni~~--~~~~~~~l~d~~~~~~~~~~~~~  149 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHS--LGIIYRDLKPENILL--DADGHIKLTDFGLAKELSSEGSR  149 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcceEEE--cCCCcEEEeecCcceecccCCCc
Confidence             558999887653  48999999999999999999995  589999999999999  66788999999999776442   


Q ss_pred             cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcc
Q psy11727        270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDR  349 (437)
Q Consensus       270 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  349 (437)
                      .....++..|+|||.+.+..++.++|+||||+++|++++|..||...+.......+...  .++                
T Consensus       150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------  211 (250)
T cd05123         150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PLR----------------  211 (250)
T ss_pred             ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CCC----------------
Confidence            34456788999999999888899999999999999999999999887765444444320  000                


Q ss_pred             cCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH---HHHhc
Q psy11727        350 LSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP---TNVLR  426 (437)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~---~e~l~  426 (437)
                                        .|.                           .....+.+||++||..||++|||+   +++++
T Consensus       212 ------------------~~~---------------------------~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         212 ------------------FPE---------------------------FLSPEARDLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             ------------------CCC---------------------------CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh
Confidence                              000                           001257899999999999999999   99999


Q ss_pred             CCCc
Q psy11727        427 HEFF  430 (437)
Q Consensus       427 Hp~~  430 (437)
                      ||||
T Consensus       247 ~~~f  250 (250)
T cd05123         247 HPFF  250 (250)
T ss_pred             CCCC
Confidence            9998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2e-37  Score=293.97  Aligned_cols=199  Identities=28%  Similarity=0.457  Sum_probs=168.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++...    .....+..|+.+++.+     .|++++++++.+...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-----~~~~i~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-----DHPNVIKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-----CCCCeeeeeeeeecCCe
Confidence            57999999999999999999999899999999886321    1134556677777665     68899999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        186 LCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .++||||+++ +|.+++...  ....+++..+..++.|++.||+|||+  .||+||||+|+||++  +.++.++|+|||+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~nil~--~~~~~~~l~d~~~  152 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS--KRIMHRDIKPANVFI--TATGVVKLGDLGL  152 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecCCcChhhEEE--CCCCcEEEeccce
Confidence            9999999965 888888642  22458999999999999999999995  489999999999999  6788899999999


Q ss_pred             ceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        263 SCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       263 s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +......   .....++..|+|||++.+..++.++|+|||||++|+|++|..||....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         153 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             eeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence            8765432   233567889999999999899999999999999999999999997643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=8.5e-38  Score=294.53  Aligned_cols=244  Identities=26%  Similarity=0.371  Sum_probs=196.4

Q ss_pred             eeeeceecccCceEEEEEEEcCCC----eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEK----CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +.+.+.||+|+||.||+|.+..++    ..||+|.+.....  ....+..|+.++..+     .|+||+++++++.+.+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-----DHPNIVKLLGVCTEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-----CCCchheEEEEEcCCCe
Confidence            356789999999999999998766    8999999975432  244666677777665     68899999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .++|||++++ +|.+++.......+++..+..++.||+.||++||+  .|++|+||||+||++  +.++.++|+|||++.
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~--~~~~h~dl~~~nil~--~~~~~~~l~dfg~~~  151 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES--KNFIHRDLAARNCLV--GENLVVKISDFGLSR  151 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc--CCeeecccccceEEE--ccCCeEEEcccCCce
Confidence            9999999965 88888876543338999999999999999999995  489999999999999  667789999999997


Q ss_pred             ecCCcccc----ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQTLYQ----YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ........    ..++..|+|||.+.+..++.++|+||||+++++|++ |.+||.+.+.....+.+......+..     
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----  226 (258)
T smart00219      152 DLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKP-----  226 (258)
T ss_pred             ecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC-----
Confidence            66443211    225678999999988889999999999999999998 89999887776666655331110000     


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                               ......+.+++.+||..||.+||
T Consensus       227 ---------------------------------------------------------~~~~~~~~~~i~~~l~~~p~~Rp  249 (258)
T smart00219      227 ---------------------------------------------------------ENCPPEIYKLMLQCWAEDPEDRP  249 (258)
T ss_pred             ---------------------------------------------------------CcCCHHHHHHHHHHCcCChhhCc
Confidence                                                                     00112578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |+.|+++
T Consensus       250 t~~~ll~  256 (258)
T smart00219      250 TFSELVE  256 (258)
T ss_pred             CHHHHHh
Confidence            9999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.9e-38  Score=304.21  Aligned_cols=247  Identities=22%  Similarity=0.275  Sum_probs=192.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .+|++.+.||+|+||.||+|.+..     ++..||+|+++....  ....+..|+.++..+     .|+||+++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~iv~~~~~~~~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-----QHPNIVCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEcC
Confidence            468899999999999999998754     357899999974332  123344555555544     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      .+..++++||+.+ +|.+++....              ...+++..+..++.|++.||.|||+  .||+||||||+||++
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~--~gi~H~dlkp~Nil~  157 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS--HHVVHKDLATRNVLV  157 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--cCccccccchhheEe
Confidence            9999999999965 7888875321              1347888899999999999999995  489999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQ  321 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~  321 (437)
                        ++++.+||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+.
T Consensus       158 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  235 (283)
T cd05091         158 --FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV  235 (283)
T ss_pred             --cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence              567789999999987553221     12344678999999998889999999999999999998 8899998877666


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+......+..                                                              .....
T Consensus       236 ~~~i~~~~~~~~~--------------------------------------------------------------~~~~~  253 (283)
T cd05091         236 IEMIRNRQVLPCP--------------------------------------------------------------DDCPA  253 (283)
T ss_pred             HHHHHcCCcCCCC--------------------------------------------------------------CCCCH
Confidence            6655432111000                                                              00011


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      .+.+|+.+||+.||.+|||+.+++..
T Consensus       254 ~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         254 WVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            46899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=5e-38  Score=302.80  Aligned_cols=249  Identities=26%  Similarity=0.354  Sum_probs=194.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-----CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-----KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||++.....     ...+|+|.+.....  ....+..|+.+++.+.    .|+||+++++++.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~   86 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGVCT   86 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc----CCCCeeeEEEEEc
Confidence            46799999999999999999987643     37899999874321  1234556777776653    6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNT--------------NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~--------------~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      ..+.+++||||+++ +|.+++...              ....+++..+..++.||+.||+|||+  .||+||||||+|||
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp~Nil  164 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS--KKCIHRDLAARNVL  164 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCccccccceeeEE
Confidence            99999999999955 888888642              23458999999999999999999995  48999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVD  320 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~  320 (437)
                      +  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+
T Consensus       165 ~--~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  242 (293)
T cd05053         165 V--TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE  242 (293)
T ss_pred             E--cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence            9  668889999999997654321     11223567999999998899999999999999999998 999998877665


Q ss_pred             HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       321 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      ....+......+.                                                              +....
T Consensus       243 ~~~~~~~~~~~~~--------------------------------------------------------------~~~~~  260 (293)
T cd05053         243 LFKLLKEGYRMEK--------------------------------------------------------------PQNCT  260 (293)
T ss_pred             HHHHHHcCCcCCC--------------------------------------------------------------CCCCC
Confidence            5554432110000                                                              00001


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ..+.+|+.+||..||.+|||+++++++
T Consensus       261 ~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         261 QELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            257899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=8.7e-38  Score=294.91  Aligned_cols=245  Identities=25%  Similarity=0.361  Sum_probs=196.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+|++.+.||+|+||.||+|.+. .+..+|+|.+.........+..|+.+++.+     .|++++++++++......++|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKL-----SHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhC-----CCCCeeeEEEEEccCCceEEE
Confidence            47889999999999999999875 467899999875544445677888888876     688999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+.+ +|.+++.... ..+++..++.++.|++.+|+|||+  .|++||||||+||++  +.++.++|+|||.+.....
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~dl~p~ni~i--~~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112          78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLES--SNVIHRDLAARNCLV--GENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccccceEEE--cCCCeEEECCCcceeeccc
Confidence            999965 7887776543 357899999999999999999995  489999999999999  6678899999999876543


Q ss_pred             ccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 TLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...    ...++..|+|||++.+..++.++|+||||+++|||++ |.+||...........+.+......          
T Consensus       153 ~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------  222 (256)
T cd05112         153 DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK----------  222 (256)
T ss_pred             CcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC----------
Confidence            322    1234567999999998899999999999999999998 9999988776665555422110000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               |                       ..    ....+.+|+.+||+.+|.+|||+++
T Consensus       223 -------------------------~-----------------------~~----~~~~~~~l~~~~l~~~p~~Rp~~~~  250 (256)
T cd05112         223 -------------------------P-----------------------RL----ASQSVYELMQHCWKERPEDRPSFSL  250 (256)
T ss_pred             -------------------------C-----------------------CC----CCHHHHHHHHHHcccChhhCCCHHH
Confidence                                     0                       00    0025789999999999999999999


Q ss_pred             HhcC
Q psy11727        424 VLRH  427 (437)
Q Consensus       424 ~l~H  427 (437)
                      ++++
T Consensus       251 ~l~~  254 (256)
T cd05112         251 LLHQ  254 (256)
T ss_pred             HHHh
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=5.5e-38  Score=304.98  Aligned_cols=249  Identities=24%  Similarity=0.327  Sum_probs=193.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-------CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|.+.+.||+|+||.||+|.+..       +...+|+|.+....  .....+..|+.++..+.    .|+||++++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~   92 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLLGA   92 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc----CCCCEeeEEEE
Confidence            4789999999999999999997643       23579999987432  12234556777776653    58999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +...+..++||||+++ +|.+++.....              ..+++..+..++.||+.||+|||+  .|++||||||+|
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~N  170 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS--KKCIHRDLAARN  170 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHHh
Confidence            9999999999999965 89999876421              247889999999999999999995  489999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      |++  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+...
T Consensus       171 ill--~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~  248 (307)
T cd05098         171 VLV--TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  248 (307)
T ss_pred             eEE--cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence            999  677889999999987553211     11223467999999999899999999999999999998 8899988766


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+......+.                                                              +..
T Consensus       249 ~~~~~~~~~~~~~~~--------------------------------------------------------------~~~  266 (307)
T cd05098         249 EELFKLLKEGHRMDK--------------------------------------------------------------PSN  266 (307)
T ss_pred             HHHHHHHHcCCCCCC--------------------------------------------------------------CCc
Confidence            554444322100000                                                              000


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||..+|.+|||+.+++++
T Consensus       267 ~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         267 CTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            01257899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4645|consensus

Probab=100.00  E-value=3.2e-40  Score=347.87  Aligned_cols=255  Identities=27%  Similarity=0.420  Sum_probs=206.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .-+++-...||.|.||.||-|.+..||+..|+|.++..   ........+|..+++.+     .|||+|+.+|+-.+.+.
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-----nHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-----NHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-----cCccccccCceeecHHH
Confidence            44677788999999999999999999999999988632   34456778899999988     78999999999999999


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ++|.||||. |+|.+++....  -.++...+.+..|++.|++|||.+  |||||||||+||||  +.+|.||++|||+|.
T Consensus      1309 v~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~--gIVHRDIK~aNI~L--d~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH--GIVHRDIKPANILL--DFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             HHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc--CceecCCCccceee--ecCCcEEeeccccee
Confidence            999999995 57888877653  368889999999999999999965  89999999999999  778899999999998


Q ss_pred             ecCCcc-------ccccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCC
Q psy11727        265 HVGQTL-------YQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNE-VDQMTKIIEVLGMPP  333 (437)
Q Consensus       265 ~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~p~  333 (437)
                      .+....       ..+.||+.|||||++.+.   +...+.|||||||++.||+||+.||...+. ..++-..-.+. .|+
T Consensus      1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh-~Pq 1461 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH-KPQ 1461 (1509)
T ss_pred             EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC-CCC
Confidence            775443       357899999999999863   466899999999999999999999986443 33333321111 111


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                                                        +|..  +                         ...-+|||..||+.
T Consensus      1462 ----------------------------------~P~~--l-------------------------s~~g~dFle~Cl~~ 1480 (1509)
T KOG4645|consen 1462 ----------------------------------IPER--L-------------------------SSEGRDFLEHCLEQ 1480 (1509)
T ss_pred             ----------------------------------Cchh--h-------------------------hHhHHHHHHHHHhc
Confidence                                              0000  0                         00237999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      ||..||++.|+|+|.|=+-..++
T Consensus      1481 dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1481 DPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             CchhhhHHHHHHHhhcccccccc
Confidence            99999999999999998776654

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.2e-38  Score=298.41  Aligned_cols=245  Identities=20%  Similarity=0.292  Sum_probs=188.4

Q ss_pred             eeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      |.+.+.||+|+||.||+|....+   +..||+|.++....   ....+..|+.+++.+     .|+||+++++.+...+.
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-----DHPNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEeeeccCCc
Confidence            56789999999999999987653   47899999874322   123455676666655     78999999998765443


Q ss_pred             ------EEEEEEeccC-cHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        186 ------LCLVFELLSY-NLYNLIRNTN----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       186 ------~~lV~E~~~~-~L~~~l~~~~----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                            .++||||+.+ +|..++....    ...+++..+..++.|++.||.|||+  .|++||||||+||++  ++++.
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~--~~i~H~dlkp~Nil~--~~~~~  151 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCML--REDMT  151 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchheEEE--CCCCe
Confidence                  8999999965 7887774432    2358999999999999999999995  489999999999999  67788


Q ss_pred             EEEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||++........     ...++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+.+..+...
T Consensus       152 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05035         152 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG  231 (273)
T ss_pred             EEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999976533221     1234567999999988899999999999999999999 89999887765554444321


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...+                                   .|                           ......+.++|.
T Consensus       232 ~~~~-----------------------------------~~---------------------------~~~~~~~~~li~  249 (273)
T cd05035         232 NRLK-----------------------------------QP---------------------------EDCLDELYDLMY  249 (273)
T ss_pred             CCCC-----------------------------------CC---------------------------cCCCHHHHHHHH
Confidence            0000                                   00                           001125789999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q psy11727        409 RMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~H  427 (437)
                      +||+.||.+|||+.+++.+
T Consensus       250 ~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         250 SCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=8.3e-38  Score=297.21  Aligned_cols=246  Identities=20%  Similarity=0.284  Sum_probs=193.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe---EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC---QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|+..+.||+|+||.||+|.+..++.   .+|+|.+.....  ....+..|+.++..+     .|+||+++.+++...
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-----SHHNIIRLEGVVTKF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-----CCCCeeEEEEEEccC
Confidence            3578899999999999999999876554   799999864321  123345566555544     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+  .|++||||||+||++  +.++.+||+|||+
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nili--~~~~~~kl~dfg~  153 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD--MNYVHRDLAARNILV--NSNLECKVSDFGL  153 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEE--cCCCcEEECCCcc
Confidence            999999999976 7888876543 458999999999999999999995  489999999999999  6688899999999


Q ss_pred             ceecCCcccc------ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQTLYQ------YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +.........      ...+..|+|||++.+..++.++|+|||||++|||++ |..||...+..+....+......|...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~  233 (268)
T cd05063         154 SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPM  233 (268)
T ss_pred             ceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCC
Confidence            8765332111      112346999999998889999999999999999998 999998877766666654321111100


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                    .....+.+|+.+||..||
T Consensus       234 --------------------------------------------------------------~~~~~~~~li~~c~~~~p  251 (268)
T cd05063         234 --------------------------------------------------------------DCPSAVYQLMLQCWQQDR  251 (268)
T ss_pred             --------------------------------------------------------------CCCHHHHHHHHHHcCCCc
Confidence                                                                          001257899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+||+++++++
T Consensus       252 ~~Rp~~~~i~~  262 (268)
T cd05063         252 ARRPRFVDIVN  262 (268)
T ss_pred             ccCcCHHHHHH
Confidence            99999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=6.6e-38  Score=295.68  Aligned_cols=242  Identities=24%  Similarity=0.329  Sum_probs=192.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|.+.+.||+|+||.||++.  .+++.||+|.++.. .....+..|+.++..+     .|+|++++++++... ..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-VTAQAFLEETAVMTKL-----HHKNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-chHHHHHHHHHHHHhC-----CCCCcCeEEEEEcCC-CcEEE
Confidence            579999999999999999985  47788999998643 2334566777777665     789999999988754 57999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.......+++..+..++.|++.||.|||+  .|++||||||+||++  +.++.++|+|||++.....
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~~~H~dl~p~nili--~~~~~~kl~Dfg~~~~~~~  152 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES--KKLVHRDLAARNILV--SEDGVAKVSDFGLARVGSM  152 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEE--cCCCcEEECCCccceeccc
Confidence            999965 89999877655568999999999999999999995  589999999999999  6678899999999876544


Q ss_pred             ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       269 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                      .......+..|+|||++.+..++.++|+|||||++|+|++ |++||...+..+....+......++.             
T Consensus       153 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------  219 (254)
T cd05083         153 GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPP-------------  219 (254)
T ss_pred             cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCC-------------
Confidence            3333444667999999998899999999999999999998 99999887765544433221100000             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                                                                       ......+.+||.+||+.+|.+|||+++++.
T Consensus       220 -------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         220 -------------------------------------------------EGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             -------------------------------------------------CcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                                                             000125789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1035|consensus

Probab=100.00  E-value=7.6e-39  Score=336.06  Aligned_cols=254  Identities=30%  Similarity=0.453  Sum_probs=193.8

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      ....+|+..+.||+||||.||+++++-+|+.||||+|...  ........+|+.++.++     +|||||+++..|... 
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-----nHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-----NHPNVVRYYSAWVEST  550 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-----CCcceeeeehhhhccC
Confidence            4567789999999999999999999999999999999765  34455677899999888     789999988755210 


Q ss_pred             --------------------------------------------------------------------------------
Q psy11727        184 --------------------------------------------------------------------------------  183 (437)
Q Consensus       184 --------------------------------------------------------------------------------  183 (437)
                                                                                                      
T Consensus       551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~  630 (1351)
T KOG1035|consen  551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL  630 (1351)
T ss_pred             CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence                                                                                            


Q ss_pred             --------------------------------------CEEEEEEEeccCcHHHHH-HhcCCCCCCHHHHHHHHHHHHHH
Q psy11727        184 --------------------------------------NHLCLVFELLSYNLYNLI-RNTNFHGVSLNLTKKFAQQLCCA  224 (437)
Q Consensus       184 --------------------------------------~~~~lV~E~~~~~L~~~l-~~~~~~~ls~~~~~~i~~qi~~a  224 (437)
                                                            -.+||-||||..++.+.+ ..+.+ .-.....+++++||+.|
T Consensus       631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEG  709 (1351)
T ss_pred             ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHH
Confidence                                                  127999999988655554 44432 11468889999999999


Q ss_pred             HHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC---------------------CccccccccccccChh
Q psy11727        225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---------------------QTLYQYIQSRYYRSPE  283 (437)
Q Consensus       225 L~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~---------------------~~~~~~~gt~~y~aPE  283 (437)
                      |+|+|+  .|||||||||.|||+  +++..|||+|||+|+...                     ...++.+||..|+|||
T Consensus       710 LaYIH~--~giIHRDLKP~NIFL--d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE  785 (1351)
T KOG1035|consen  710 LAYIHD--QGIIHRDLKPRNIFL--DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE  785 (1351)
T ss_pred             HHHHHh--CceeeccCCcceeEE--cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence            999995  589999999999999  678889999999997621                     1234578999999999


Q ss_pred             hhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceecc
Q psy11727        284 VLLGIP---YDLAIDMWSLGCILVELHTGEPLFSGKNEVD-QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKK  359 (437)
Q Consensus       284 ~~~~~~---~~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (437)
                      ++.+..   |+.|+||||||+|++||+   .||...-+.. .+..+.  -|..|..        ..||+           
T Consensus       786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR--~g~iP~~--------~~f~~-----------  841 (1351)
T KOG1035|consen  786 LLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLR--KGSIPEP--------ADFFD-----------  841 (1351)
T ss_pred             HhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcc--cCCCCCC--------ccccc-----------
Confidence            998765   999999999999999999   4687543332 222221  1111110        01110           


Q ss_pred             ccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        360 STDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                                                            .....-..+|++||+.||.+||||.|+|+|.||-.
T Consensus       842 --------------------------------------~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  842 --------------------------------------PEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             --------------------------------------ccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                                                  01112368999999999999999999999999974

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.2e-37  Score=295.08  Aligned_cols=207  Identities=23%  Similarity=0.377  Sum_probs=171.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|++.+.||+|+||.||++.+. .+..+|+|.+.........+..|+.+++.+     .|+||+++++.+.. ...+
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~-~~~~   76 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVTK-EPIY   76 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc-----CCCCcceEEEEEcC-CCeE
Confidence            4578999999999999999999865 455699999875544445667788887765     68899999999887 7889


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++|||+++ +|.+++.......+++..+..++.||+.||.|||+  .|++|+||||+||++  +.++.+||+|||.+...
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~ni~i--~~~~~~~l~d~~~~~~~  152 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILV--SASLVCKIADFGLARVI  152 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEE--cCCCcEEECCCcceeec
Confidence            99999964 89999877554568889999999999999999995  489999999999999  67889999999998765


Q ss_pred             CCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        267 GQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       267 ~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      .....    ...++..|+|||++.+..++.++|+|||||++|++++ |.+||.+.+.......+
T Consensus       153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  216 (260)
T cd05073         153 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL  216 (260)
T ss_pred             cCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            43211    1234567999999998889999999999999999999 99999987766555544

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-37  Score=293.95  Aligned_cols=237  Identities=25%  Similarity=0.369  Sum_probs=185.0

Q ss_pred             ceecccCceEEEEEEEcCCC---eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      +.||+|+||.||+|....++   ..+|+|.+.....  ....+..|+.+++.+     .|+||+++++++. .+.+++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-----DHPCIVRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEc-CCceEEEE
Confidence            46899999999999876555   7899999875443  234556677776655     7899999999876 45689999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||+.+ +|.+++....  .+++..+..++.|++.||+|||.  .|++|+||||+|||+  +.++.+||+|||++......
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~nili--~~~~~~kl~df~~~~~~~~~  148 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES--KHFVHRDLAARNVLL--VNRHQAKISDFGMSRALGAG  148 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh--cCeeccCcccceEEE--cCCCcEEeccccccceeecC
Confidence            99964 8999887654  58999999999999999999995  489999999999999  67888999999999766433


Q ss_pred             cccc------cccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        270 LYQY------IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       270 ~~~~------~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....      .++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+......+.         
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------  219 (257)
T cd05060         149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPR---------  219 (257)
T ss_pred             CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCC---------
Confidence            2211      12357999999998899999999999999999998 9999988766554444322100000         


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                |.                           .....+.++|.+||..||.+|||+.
T Consensus       220 --------------------------~~---------------------------~~~~~l~~li~~cl~~~p~~Rp~~~  246 (257)
T cd05060         220 --------------------------PE---------------------------ECPQEIYSIMLSCWKYRPEDRPTFS  246 (257)
T ss_pred             --------------------------CC---------------------------CCCHHHHHHHHHHhcCChhhCcCHH
Confidence                                      00                           0001578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       247 ~l~~  250 (257)
T cd05060         247 ELES  250 (257)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6.8e-38  Score=298.29  Aligned_cols=245  Identities=19%  Similarity=0.274  Sum_probs=186.6

Q ss_pred             eeeeceecccCceEEEEEEEcCCCe--EEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC---
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKC--QVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK---  183 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~---  183 (437)
                      |.+.+.||+|+||.||+|.+..++.  .||+|.++...   .....+..|..++..+     .|+||+++++.+...   
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-----DHPNVMRLIGVCLQTVES   75 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEccCCcc
Confidence            3567899999999999999877765  69999886432   2233445566666555     789999999876432   


Q ss_pred             ---CEEEEEEEecc-CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        184 ---NHLCLVFELLS-YNLYNLIRNTN----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       184 ---~~~~lV~E~~~-~~L~~~l~~~~----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                         ...++||||+. ++|.+++....    ...+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+
T Consensus        76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~  151 (272)
T cd05075          76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK--SFIHRDLAARNCML--NENMNV  151 (272)
T ss_pred             cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC--CeeccccchhheEE--cCCCCE
Confidence               35789999996 47888764322    23489999999999999999999964  89999999999999  678889


Q ss_pred             EEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHh
Q psy11727        256 KIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       256 kL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~  329 (437)
                      ||+|||++........     ...++..|+|||++.+..++.++|+|||||++|+|++ |++||.+.........+....
T Consensus       152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  231 (272)
T cd05075         152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN  231 (272)
T ss_pred             EECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999976543221     2234667999999999899999999999999999999 899998876655544443210


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      ..+.                                                              .......+.++|.+
T Consensus       232 ~~~~--------------------------------------------------------------~~~~~~~~~~li~~  249 (272)
T cd05075         232 RLKQ--------------------------------------------------------------PPDCLDGLYSLMSS  249 (272)
T ss_pred             CCCC--------------------------------------------------------------CCCCCHHHHHHHHH
Confidence            0000                                                              00001157899999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q psy11727        410 MLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~H  427 (437)
                      ||+.||++|||+.+++++
T Consensus       250 ~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         250 CWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.4e-37  Score=300.42  Aligned_cols=202  Identities=22%  Similarity=0.239  Sum_probs=158.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCcccchHHHHHHHH----------HHHhhhcCCCCCcE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKPFLNQAQIEVQL----------LEKINKADIHSRYI  173 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~e~~~----------~~~l~~~~~~h~~i  173 (437)
                      ...++|++.++||+|+||+||+|.+..+   +..+|+|+......   ....|...          ........+.|+++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~---~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i   85 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE---TIVMETLVYNNIYDIDKIALWKNIHNIDHLGI   85 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC---chhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence            3456899999999999999999998877   66778886542221   11111111          11122345689999


Q ss_pred             EEecceeeECC----EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        174 VKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       174 v~l~~~~~~~~----~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      +++++++....    +.++++|++..++.+.+....  ..++..++.++.|++.||+|||++  ||+||||||+|||+  
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~iiHrDiKp~Nill--  159 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEH--GISHGDIKPENIMV--  159 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--
Confidence            99998766543    568899998888877766542  357888999999999999999964  89999999999999  


Q ss_pred             CCCCCEEEEeCCCceecCC----------ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        250 PKRSAIKIIDFGSSCHVGQ----------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.++.++|+|||+|.....          ......||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+
T Consensus       160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence            6678899999999976521          1123468999999999999999999999999999999999999998774

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=3.3e-38  Score=295.20  Aligned_cols=180  Identities=25%  Similarity=0.293  Sum_probs=152.1

Q ss_pred             cCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHH
Q psy11727        121 GSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYN  199 (437)
Q Consensus       121 G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~  199 (437)
                      |.||.||++++..+++.||+|.+....    ....|...+.     ...||||+++++++...+..++||||+++ +|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTII-----PHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHH-----hcCCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            899999999999999999999997542    1222322221     12589999999999999999999999965 8988


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccc
Q psy11727        200 LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY  279 (437)
Q Consensus       200 ~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y  279 (437)
                      ++....  .+++..+..++.|++.||+|||.  .||+||||||+||++  +.++.++|+|||.+...........++..|
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nil~--~~~~~~~l~df~~~~~~~~~~~~~~~~~~y  148 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHR--EGIVCRDLNPNNILL--DDRGHIQLTYFSRWSEVEDSCDGEAVENMY  148 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEE--cCCCCEEEecccchhccccccccCCcCccc
Confidence            887653  48999999999999999999995  589999999999999  677889999999887665555555667889


Q ss_pred             cChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       280 ~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      +|||.+.+..++.++|+||+||++|+|++|..||..
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~  184 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC  184 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence            999999888899999999999999999999988753

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.6e-37  Score=302.76  Aligned_cols=248  Identities=25%  Similarity=0.349  Sum_probs=193.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-------CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|.+.+.||+|+||.||+|...       .....+|+|.++....  ....+..|+.++..+.    .|+||++++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~   86 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG----KHKNIINLLGV   86 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc----CCCCeeeEEEE
Confidence            468999999999999999999753       2345799999874322  2234556777766652    58999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +.+.+.+++||||+++ +|.+++....              ...+++..+..++.||+.||.|||+  .|++||||||+|
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dlkp~N  164 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES--RRCIHRDLAARN  164 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH--CCeeecccccee
Confidence            9999999999999965 8998886532              1348899999999999999999995  489999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+.
T Consensus       165 ill--~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         165 VLV--TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             EEE--cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence            999  667889999999997654321     11223457999999999899999999999999999999 8999988776


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+........                                   +                           ..
T Consensus       243 ~~~~~~~~~~~~~~~-----------------------------------~---------------------------~~  260 (314)
T cd05099         243 EELFKLLREGHRMDK-----------------------------------P---------------------------SN  260 (314)
T ss_pred             HHHHHHHHcCCCCCC-----------------------------------C---------------------------CC
Confidence            665555432100000                                   0                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      ....+.+||.+||..||.+|||+.++++
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         261 CTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            0115789999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.2e-37  Score=299.43  Aligned_cols=257  Identities=27%  Similarity=0.440  Sum_probs=196.3

Q ss_pred             CeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      +|++.+.||+|+||.||++.+.   .+++.||||+++...     ........|+.++..+.    +|++|+++++.+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~~~~~~~~   76 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR----RCPFLVTLHYAFQT   76 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc----CCcchhhhheeeec
Confidence            4889999999999999999864   467889999986422     12234556777777664    58999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+++||||+++ +|.+.+...  ..+++..++.++.|++.+|.|||+  .|++||||||+||++  +.++.++|+|||
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~--~~~~H~dl~p~nil~--~~~~~~~l~dfg  150 (288)
T cd05583          77 DTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQ--LGIIYRDIKLENILL--DSEGHVVLTDFG  150 (288)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEE--CCCCCEEEEECc
Confidence            9999999999965 788887654  348999999999999999999995  489999999999999  667889999999


Q ss_pred             CceecCCcc----ccccccccccChhhhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQTL----YQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++.......    ....|+..|+|||.+.+..  .+.++|+||||+++|+|++|..||...........+....      
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~------  224 (288)
T cd05583         151 LSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI------  224 (288)
T ss_pred             cccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH------
Confidence            986543221    2345788999999987765  7889999999999999999999997543222222221110      


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                       .....                         ..|                           ......+.+||.+||+.||
T Consensus       225 -~~~~~-------------------------~~~---------------------------~~~~~~l~~li~~~l~~~p  251 (288)
T cd05583         225 -LKSKP-------------------------PFP---------------------------KTMSAEARDFIQKLLEKDP  251 (288)
T ss_pred             -HccCC-------------------------CCC---------------------------cccCHHHHHHHHHHhcCCH
Confidence             00000                         000                           0001156899999999999


Q ss_pred             CCCCC---HHHHhcCCCcCcCCCC
Q psy11727        416 KKRIS---PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       416 ~~R~t---~~e~l~Hp~~~~~~~~  436 (437)
                      ++|||   +.++|+||||+...++
T Consensus       252 ~~R~t~~~~~~~l~~~~~~~~~~~  275 (288)
T cd05583         252 KKRLGANGADEIKNHPFFQGIDWD  275 (288)
T ss_pred             hhccCcchHHHHhcCcccccCCHH
Confidence            99999   5677999999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.5e-37  Score=297.82  Aligned_cols=201  Identities=24%  Similarity=0.324  Sum_probs=159.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|++.+.||+|+||+||+|.+..+++    .+++|.+.....  ....+..|+..+     ..+.|+||+++++++. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-----~~l~h~~iv~~~~~~~-~   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAM-----GSLDHAYIVRLLGICP-G   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHH-----hcCCCCCcceEEEEEC-C
Confidence            578899999999999999999877776    477777753221  112222333333     3458999999999875 4


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ...++|+|+++ |+|.+++.... ..+++..+..++.||+.||+|||+  .|++||||||+|||+  +.++.+||+|||+
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~nili--~~~~~~kl~Dfg~  155 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE--HRMVHRNLAARNILL--KSDSIVQIADFGV  155 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEE--cCCCcEEEcCCcc
Confidence            56788999996 58999887643 458999999999999999999995  479999999999999  6788899999999


Q ss_pred             ceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q psy11727        263 SCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQ  321 (437)
Q Consensus       263 s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~  321 (437)
                      +.......     ....++..|+|||++.+..++.++|||||||++|||++ |.+||.+......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~  220 (279)
T cd05111         156 ADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV  220 (279)
T ss_pred             ceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            97653221     22345678999999998899999999999999999998 9999988765443

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=1.1e-37  Score=324.66  Aligned_cols=272  Identities=20%  Similarity=0.272  Sum_probs=181.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC----CeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecce-----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE----KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH-----  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~----~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~-----  179 (437)
                      .++|.+.+.||+|+||.||+|.+..+    +..||+|.+....      ..|..+.+.+.+.  .+.+++.+...     
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e~~~~e~l~~~--~~~~~~~~~~~~~~~~  202 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVEIWMNERVRRA--CPNSCADFVYGFLEPV  202 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhHHHHHHHHHhh--chhhHHHHHHhhhccc
Confidence            57899999999999999999999988    8999999886322      1233333333221  11112222211     


Q ss_pred             -eeECCEEEEEEEeccC-cHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q psy11727        180 -FTWKNHLCLVFELLSY-NLYNLIRNTNFH------------------GVSLNLTKKFAQQLCCALAFLSSPELSIIHCD  239 (437)
Q Consensus       180 -~~~~~~~~lV~E~~~~-~L~~~l~~~~~~------------------~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrD  239 (437)
                       ......+++||||+++ +|.+++......                  ......+..++.||+.||+|||++  ||+|||
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~--gIiHRD  280 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST--GIVHRD  280 (566)
T ss_pred             ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC--CEEeCc
Confidence             2456689999999966 788887654311                  112345678999999999999964  899999


Q ss_pred             CCCCcEEEecCCCCCEEEEeCCCceecCC----ccccccccccccChhhhcCC----------------------CCCCc
Q psy11727        240 LKPENILLCSPKRSAIKIIDFGSSCHVGQ----TLYQYIQSRYYRSPEVLLGI----------------------PYDLA  293 (437)
Q Consensus       240 iKp~NIll~~~~~~~ikL~DFG~s~~~~~----~~~~~~gt~~y~aPE~~~~~----------------------~~~~~  293 (437)
                      |||+|||++ +.++.+||+|||+|.....    .....++++.|+|||.+...                      .++.+
T Consensus       281 LKP~NILl~-~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k  359 (566)
T PLN03225        281 VKPQNIIFS-EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR  359 (566)
T ss_pred             CCHHHEEEe-CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence            999999994 2457899999999975432    22356789999999976432                      23456


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCc
Q psy11727        294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKR  373 (437)
Q Consensus       294 ~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (437)
                      +|||||||++|||+++..++  .+....+..+....+.....|.......  +                     .+....
T Consensus       360 ~DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~---------------------~~~~~~  414 (566)
T PLN03225        360 FDIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLVEPR--A---------------------SPDLRR  414 (566)
T ss_pred             cccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhhccc--c---------------------chhhhh
Confidence            79999999999999966553  4444555555554443332221110000  0                     000000


Q ss_pred             hhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        374 LDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .-+++                  ..+.....|||.+||++||.+|||+.|+|+||||++..
T Consensus       415 ~~~~~------------------d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        415 GFEVL------------------DLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             hhhhc------------------cccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence            00000                  00112457999999999999999999999999998754

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-37  Score=296.87  Aligned_cols=241  Identities=26%  Similarity=0.325  Sum_probs=187.4

Q ss_pred             ceecccCceEEEEEEEcCCCe--EEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKC--QVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~--~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||+|.+..++.  .+|+|.++...  .....+..|+.++.++.    .||||+++++++...+.+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc----cCCCeeeEEEEEecCCCceEEEE
Confidence            468999999999999988775  46888876322  22345667888777764    68999999999999999999999


Q ss_pred             ecc-CcHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        192 LLS-YNLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       192 ~~~-~~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                      |++ ++|.+++....              ...+++..+..++.|++.||+|||+  .|++||||||+|||+  ++++.+|
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nili--~~~~~~k  152 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILV--GENYVAK  152 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccccceEEE--cCCCeEE
Confidence            996 48999886532              1247899999999999999999995  489999999999999  6788899


Q ss_pred             EEeCCCceecCCcccc--ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        257 IIDFGSSCHVGQTLYQ--YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       257 L~DFG~s~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |+|||++.........  ...+..|+|||++.+..++.++|+|||||++|||++ |..||.+.+..+....+......+.
T Consensus       153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~  232 (270)
T cd05047         153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK  232 (270)
T ss_pred             ECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCC
Confidence            9999998533221111  223557999999998899999999999999999997 9999988776555544321100000


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                                                         +                           ......+.+|+.+||..
T Consensus       233 -----------------------------------~---------------------------~~~~~~~~~li~~~l~~  250 (270)
T cd05047         233 -----------------------------------P---------------------------LNCDDEVYDLMRQCWRE  250 (270)
T ss_pred             -----------------------------------C---------------------------CcCCHHHHHHHHHHccc
Confidence                                               0                           00011578999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy11727        414 DPKKRISPTNVLR  426 (437)
Q Consensus       414 dP~~R~t~~e~l~  426 (437)
                      ||.+|||+.+++.
T Consensus       251 ~p~~Rps~~~il~  263 (270)
T cd05047         251 KPYERPSFAQILV  263 (270)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.3e-37  Score=312.84  Aligned_cols=203  Identities=25%  Similarity=0.377  Sum_probs=164.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+..     ++..||||+++....  ....+..|+.++..+.    .|||||++++++.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~----~HpnIv~l~~~~~  111 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG----PHLNIVNLLGACT  111 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC----CCCCeeeEEEEEc
Confidence            4578899999999999999998643     335799999964322  2234667888777763    4899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC-------------------------------------------------------
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN-------------------------------------------------------  205 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~-------------------------------------------------------  205 (437)
                      ..+..||||||+++ +|.+++....                                                       
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence            99999999999965 8888775421                                                       


Q ss_pred             ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        206 ---------------------------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       206 ---------------------------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                                                             ...+++..+..++.||+.||+|||+  .||+||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dikp~Nil  269 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS--KNCVHRDLAARNVL  269 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHhEE
Confidence                                                   1247888899999999999999996  48999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV  319 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~  319 (437)
                      +  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus       270 l--~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~  346 (400)
T cd05105         270 L--AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD  346 (400)
T ss_pred             E--eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence            9  567789999999997653221     12345678999999999899999999999999999997 99999875443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0614|consensus

Probab=100.00  E-value=7.2e-40  Score=316.16  Aligned_cols=260  Identities=27%  Similarity=0.453  Sum_probs=217.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      ..+.+++..||-||||.|=++........+|+|++++. ...+.-+.|....++-.+...++++||+++..|.+..++|+
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~-hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKK-HIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHh-hccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence            45677788999999999999987766667999999743 33344444444444433334478999999999999999999


Q ss_pred             EEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||-| +|.+...+....  .+....++.++.-++.|++|||.+  |||.|||||+|.++  +.+|-+||.|||+|+.++
T Consensus       498 LmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k--~iIYRDLKPENllL--d~~Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  498 LMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK--GIIYRDLKPENLLL--DNRGYLKLVDFGFAKKIG  571 (732)
T ss_pred             hHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc--CceeccCChhheee--ccCCceEEeehhhHHHhc
Confidence            99999 778999888764  589999999999999999999965  89999999999999  889999999999998874


Q ss_pred             --CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        268 --QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       268 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                        ....++|||+.|.|||++.++..+.++|.||||+++|||++|.|||++.++..+++.|.++..+..            
T Consensus       572 ~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~------------  639 (732)
T KOG0614|consen  572 SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE------------  639 (732)
T ss_pred             cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh------------
Confidence              455689999999999999999999999999999999999999999999999999999988653211            


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-----
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-----  420 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-----  420 (437)
                                            +|..  .                         .....+||+++...+|.+|..     
T Consensus       640 ----------------------~Pr~--I-------------------------~k~a~~Lik~LCr~~P~ERLG~~~~g  670 (732)
T KOG0614|consen  640 ----------------------FPRR--I-------------------------TKTATDLIKKLCRDNPTERLGYQKGG  670 (732)
T ss_pred             ----------------------cccc--c-------------------------chhHHHHHHHHHhcCcHhhhccccCC
Confidence                                  0000  0                         003579999999999999997     


Q ss_pred             HHHHhcCCCcCcCCCC
Q psy11727        421 PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~~  436 (437)
                      +.++-+|.||..-+++
T Consensus       671 I~DIkkH~Wf~gfdwe  686 (732)
T KOG0614|consen  671 INDIKKHRWFEGFDWE  686 (732)
T ss_pred             hHHHHhhhhhhcCChh
Confidence            8899999999988776

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.3e-38  Score=298.44  Aligned_cols=243  Identities=30%  Similarity=0.377  Sum_probs=189.1

Q ss_pred             eeeceecccCceEEEEEEEc----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        113 EIDTLLGKGSFGQVVKAFDH----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.+.||.|+||.||+|...    ..+..|+||.++....  ....+..|+..+..+     .||||+++++++...+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-----RHPNIVKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-----cccccccccccccccccc
Confidence            46789999999999999887    4567899999964322  245666677777666     789999999999988889


Q ss_pred             EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||++ |+|.+++.......+++..+..|+.||+.||+|||++  +++|+||+++|||+  ++++.+||+|||++..
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~--~iiH~~l~~~nill--~~~~~~Kl~~f~~~~~  152 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN--NIIHGNLSPSNILL--DSNGQVKLSDFGLSRP  152 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT--TEEEST-SGGGEEE--ETTTEEEEESTTTGEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccc--cccccccccccccccc
Confidence            99999997 5899999887456699999999999999999999964  79999999999999  6688999999999977


Q ss_pred             cCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        266 VGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       266 ~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      .....     ........|+|||.+.+..++.++||||||+++||+++ |+.||...+..+....+.+....+...    
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----  228 (259)
T PF07714_consen  153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPD----  228 (259)
T ss_dssp             TTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBT----
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecc----
Confidence            63211     12345678999999998889999999999999999999 789999888877776663321111100    


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                .....+.++|.+||+.||.+||
T Consensus       229 ----------------------------------------------------------~~~~~~~~li~~C~~~~p~~RP  250 (259)
T PF07714_consen  229 ----------------------------------------------------------NCPKDIYSLIQQCWSHDPEKRP  250 (259)
T ss_dssp             ----------------------------------------------------------TSBHHHHHHHHHHT-SSGGGS-
T ss_pred             ----------------------------------------------------------chhHHHHHHHHHHcCCChhhCc
Confidence                                                                      0011578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |++++++
T Consensus       251 s~~~i~~  257 (259)
T PF07714_consen  251 SFQEILQ  257 (259)
T ss_dssp             -HHHHHH
T ss_pred             CHHHHHh
Confidence            9999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.8e-37  Score=299.21  Aligned_cols=209  Identities=23%  Similarity=0.323  Sum_probs=170.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC----------------eEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK----------------CQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHS  170 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~----------------~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h  170 (437)
                      .++|++.+.||+|+||.||+|.+..++                ..||+|.+....  .....+..|+.++..+     .|
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~~   78 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-----SD   78 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-----CC
Confidence            457999999999999999999876543                568999987432  2234566688877776     68


Q ss_pred             CcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q psy11727        171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTN---------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL  240 (437)
Q Consensus       171 ~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~---------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi  240 (437)
                      +||+++++++..++..++|||++.+ +|.+++....         ...+++..++.++.|++.||+|||+  .||+||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~--~~i~H~dl  156 (296)
T cd05051          79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES--LNFVHRDL  156 (296)
T ss_pred             CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH--cCcccccc
Confidence            9999999999999999999999965 8888886543         1258999999999999999999995  48999999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh--CCCCC
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLF  313 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~pf  313 (437)
                      ||+||++  +.++.++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++  |..||
T Consensus       157 kp~Nili--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~  234 (296)
T cd05051         157 ATRNCLV--GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY  234 (296)
T ss_pred             chhceee--cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence            9999999  667889999999987543221     22345678999999998889999999999999999998  77899


Q ss_pred             CCCCHHHHHHHHH
Q psy11727        314 SGKNEVDQMTKII  326 (437)
Q Consensus       314 ~~~~~~~~~~~i~  326 (437)
                      ...+....+..+.
T Consensus       235 ~~~~~~~~~~~~~  247 (296)
T cd05051         235 EHLTDQQVIENAG  247 (296)
T ss_pred             CCcChHHHHHHHH
Confidence            8776655555443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.7e-37  Score=297.04  Aligned_cols=245  Identities=19%  Similarity=0.262  Sum_probs=187.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|++.+.||+|+||+||+|.+..++.    .||+|+++....  ....+..|..++..     +.|+||+++++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-----~~~~~i~~~~~~~~~   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-----VGSPYVCRLLGICLT   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHh-----cCCCCCceEEEEEcC
Confidence            3579999999999999999999877765    489999864321  12334445555444     478999999998875


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       ...+++||+++ |+|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  ++++.+||+|||
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~--~iiH~dlkp~Nil~--~~~~~~kL~dfG  154 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV--RLVHRDLAARNVLV--KSPNHVKITDFG  154 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeeccccccceEEE--cCCCcEEECCCC
Confidence             45789999995 58988887643 3589999999999999999999964  89999999999999  567789999999


Q ss_pred             CceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++........     ...++..|+|||.+.+..++.++|||||||++|||++ |.+||...........+......+.. 
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-  233 (279)
T cd05109         155 LARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP-  233 (279)
T ss_pred             ceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC-
Confidence            9976643221     1223567999999999899999999999999999998 99999876655443333211100000 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                   ......+.++|.+||..||
T Consensus       234 -------------------------------------------------------------~~~~~~~~~li~~~l~~dp  252 (279)
T cd05109         234 -------------------------------------------------------------PICTIDVYMIMVKCWMIDS  252 (279)
T ss_pred             -------------------------------------------------------------ccCCHHHHHHHHHHcCCCh
Confidence                                                                         0001257899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      +.|||+.+++.
T Consensus       253 ~~Rp~~~~l~~  263 (279)
T cd05109         253 ECRPRFRELVD  263 (279)
T ss_pred             hhCcCHHHHHH
Confidence            99999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.7e-37  Score=298.97  Aligned_cols=245  Identities=24%  Similarity=0.365  Sum_probs=190.5

Q ss_pred             CeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+.....  ....+..|+.++..+     .||||+++++.+...
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-----NHPHVIKLYGACSQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-----CCCCEeeEEEEEecC
Confidence            47889999999999999998753     335799998864332  123456677777665     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN----------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL  240 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~----------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi  240 (437)
                      +..++||||+.+ +|.+++....                      ...+++..+..++.|++.||.|||+  .||+||||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~ivH~di  153 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE--MKLVHRDL  153 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH--CCeehhhh
Confidence            999999999964 8888875421                      1247889999999999999999995  48999999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFS  314 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~  314 (437)
                      ||+|||+  ++++.+||+|||++.......     ....++..|+|||++.+..++.++||||||+++|||++ |.+||.
T Consensus       154 kp~nill--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  231 (290)
T cd05045         154 AARNVLV--AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  231 (290)
T ss_pred             hhheEEE--cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999  667889999999987542211     12234668999999998899999999999999999998 999998


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      +.......+.+......+..                                                            
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------  251 (290)
T cd05045         232 GIAPERLFNLLKTGYRMERP------------------------------------------------------------  251 (290)
T ss_pred             CCCHHHHHHHHhCCCCCCCC------------------------------------------------------------
Confidence            87765544433221100000                                                            


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                        ......+.+||.+||+.||.+|||+.++++
T Consensus       252 --~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         252 --ENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             --CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence              000125789999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.6e-37  Score=295.42  Aligned_cols=245  Identities=21%  Similarity=0.296  Sum_probs=192.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCC---eEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ++|++.+.||+|+||.||+|.+..++   ..+|+|.++...  .....+..|+.++..+     .||||+++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCC
Confidence            57899999999999999999876444   379999886432  1123455566666554     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+  .|++||||||+|||+  +.++.++|+|||++
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~--~~i~h~dlkp~nili--~~~~~~~l~dfg~~  153 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILV--NSNLVCKVSDFGLS  153 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCEeehhhchhcEEE--CCCCeEEeCCCCcc
Confidence            99999999965 7888887643 458999999999999999999995  489999999999999  67888999999998


Q ss_pred             eecCCccc---c---ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        264 CHVGQTLY---Q---YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       264 ~~~~~~~~---~---~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ........   .   ..++..|+|||++.+..++.++|+|||||++|++++ |..||...+..+....+.+....|..  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~--  231 (267)
T cd05066         154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP--  231 (267)
T ss_pred             cccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCC--
Confidence            76533211   1   122457999999998899999999999999999887 99999887766655555332111100  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                  ......+.+|+.+||+.+|.
T Consensus       232 ------------------------------------------------------------~~~~~~~~~li~~~l~~~p~  251 (267)
T cd05066         232 ------------------------------------------------------------MDCPAALHQLMLDCWQKDRN  251 (267)
T ss_pred             ------------------------------------------------------------CCCCHHHHHHHHHHcccCch
Confidence                                                                        00011578999999999999


Q ss_pred             CCCCHHHHhc
Q psy11727        417 KRISPTNVLR  426 (437)
Q Consensus       417 ~R~t~~e~l~  426 (437)
                      +|||+.++++
T Consensus       252 ~Rp~~~~i~~  261 (267)
T cd05066         252 ERPKFEQIVS  261 (267)
T ss_pred             hCCCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.8e-37  Score=293.35  Aligned_cols=236  Identities=24%  Similarity=0.348  Sum_probs=184.0

Q ss_pred             eecccCceEEEEEEE--cCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        117 LLGKGSFGQVVKAFD--HEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      .||+|+||.||+|..  ..++..+|+|+++....   ....+..|+.++..+     .|+||+++++++. .+..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~-~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-----DNPYIVRMIGICE-AESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEc-CCCcEEEEe
Confidence            589999999999964  46778999999864322   223455666666655     7899999999875 457799999


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL  270 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~  270 (437)
                      |+++ +|.+++....  .+++..+..++.|++.||+|||+  .||+||||||.||++  +.++.+||+|||++.......
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~nill--~~~~~~kl~Dfg~~~~~~~~~  149 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEE--TNFVHRDLAARNVLL--VTQHYAKISDFGLSKALGADE  149 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchhhEEE--cCCCeEEECCCccccccCCCC
Confidence            9975 7888886543  58999999999999999999995  489999999999999  667889999999987654322


Q ss_pred             c------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        271 Y------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       271 ~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      .      ...++..|+|||.+.+..++.++|+|||||++|||++ |.+||.+.+..+....+......+.          
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~----------  219 (257)
T cd05116         150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMEC----------  219 (257)
T ss_pred             CeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC----------
Confidence            1      1223568999999988889999999999999999998 9999998777666555432111000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                               |                           ......+.+||++||+.||++|||+.+
T Consensus       220 -------------------------~---------------------------~~~~~~l~~li~~~~~~~p~~Rp~~~~  247 (257)
T cd05116         220 -------------------------P---------------------------QRCPPEMYDLMKLCWTYGVDERPGFAV  247 (257)
T ss_pred             -------------------------C---------------------------CCCCHHHHHHHHHHhccCchhCcCHHH
Confidence                                     0                           000125789999999999999999998


Q ss_pred             Hhc
Q psy11727        424 VLR  426 (437)
Q Consensus       424 ~l~  426 (437)
                      +.+
T Consensus       248 i~~  250 (257)
T cd05116         248 VEL  250 (257)
T ss_pred             HHH
Confidence            864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2e-37  Score=296.97  Aligned_cols=246  Identities=24%  Similarity=0.348  Sum_probs=192.4

Q ss_pred             cCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+|.+.+.||+|+||.||++...     .++..+|+|.+.... .....+..|+.++..+     .|+||+++++++.+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-----QHQHIVRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-----CCCCCceEEEEEecC
Confidence            46888999999999999999643     356789999886432 2234566677777665     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNF-------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~-------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      +..++||||+++ +|.+++.....             ..+++..+..++.||+.||+|||+  .|++||||||+|||+  
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~nil~--  155 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS--LHFVHRDLATRNCLV--  155 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH--CCeecccccHhhEEE--
Confidence            999999999965 88888865421             247899999999999999999995  489999999999999  


Q ss_pred             CCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy11727        250 PKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMT  323 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~  323 (437)
                      ++++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |.+||......+...
T Consensus       156 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  235 (280)
T cd05092         156 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE  235 (280)
T ss_pred             cCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence            567889999999987553221     12234678999999999999999999999999999998 999998777665555


Q ss_pred             HHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHH
Q psy11727        324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKF  403 (437)
Q Consensus       324 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (437)
                      .+........                                   +                           ......+
T Consensus       236 ~~~~~~~~~~-----------------------------------~---------------------------~~~~~~~  253 (280)
T cd05092         236 CITQGRELER-----------------------------------P---------------------------RTCPPEV  253 (280)
T ss_pred             HHHcCccCCC-----------------------------------C---------------------------CCCCHHH
Confidence            4432110000                                   0                           0000146


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy11727        404 KDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       404 ~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      .+||.+||+.||.+|||+.+++.
T Consensus       254 ~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         254 YAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHHHHccCChhhCCCHHHHHH
Confidence            89999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.2e-37  Score=300.20  Aligned_cols=249  Identities=24%  Similarity=0.345  Sum_probs=195.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-------CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|.+.+.||+|+||.||+|+..       .++..||+|.+....  .....+..|+.++..+.    .|+||++++++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~   89 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA   89 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc----cCCCchheeEE
Confidence            568999999999999999999742       245679999986432  22345667888777663    68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +...+..++||||+++ +|.+++....              ...+++..+..++.||+.||.|||++  |++||||||+|
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--givH~dlkp~N  167 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ--KCIHRDLAARN  167 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC--Ceeecccccce
Confidence            9999999999999965 8888887532              13478888999999999999999964  89999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      |++  +.++.+||+|||++.......     ....++..|+|||++.+..++.++||||||+++|+|++ |..||.+.+.
T Consensus       168 ili--~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  245 (304)
T cd05101         168 VLV--TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  245 (304)
T ss_pred             EEE--cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence            999  667889999999997654321     12234567999999999889999999999999999998 8899988776


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+........                                   +                           ..
T Consensus       246 ~~~~~~~~~~~~~~~-----------------------------------~---------------------------~~  263 (304)
T cd05101         246 EELFKLLKEGHRMDK-----------------------------------P---------------------------AN  263 (304)
T ss_pred             HHHHHHHHcCCcCCC-----------------------------------C---------------------------CC
Confidence            665554432110000                                   0                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||..+|.+|||+.++++.
T Consensus       264 ~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         264 CTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            01257899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=3.1e-37  Score=291.26  Aligned_cols=240  Identities=25%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             ceecccCceEEEEEEEcC-CC--eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHE-EK--CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~-~~--~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      +.||+|++|.||+|.+.. ++  ..||||.+.....  ....+..|+.++..+     .|+||+++++.+.. ..+++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-----DHENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-----CCCCccceeEEEcC-CeEEEEE
Confidence            468999999999998765 33  3699999975433  234566677777665     78999999999988 8999999


Q ss_pred             Eecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      |++. ++|.+++.......+++..++.++.|++.||+|||+  .|++|+||||+||++  +.++.+||+|||++......
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~di~p~nil~--~~~~~~kl~dfg~~~~~~~~  150 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES--KRFIHRDLAARNILL--ASDDKVKIGDFGLMRALPQN  150 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh--CCccccccCcccEEE--ecCCEEEecccccccccccc
Confidence            9995 589998877543468999999999999999999995  489999999999999  56788999999998766432


Q ss_pred             c------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        270 L------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       270 ~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .      ....++..|+|||++.+..++.++|||||||++|+|++ |.+||...+..+....+......++         
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------  221 (257)
T cd05040         151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE---------  221 (257)
T ss_pred             ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC---------
Confidence            1      12345678999999999899999999999999999999 9999988777766555532100000         


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                               .+                           ......+.+++.+||+.+|.+|||+.
T Consensus       222 -------------------------~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps~~  249 (257)
T cd05040         222 -------------------------RP---------------------------EACPQDIYNVMLQCWAHNPADRPTFA  249 (257)
T ss_pred             -------------------------CC---------------------------ccCCHHHHHHHHHHCCCCcccCCCHH
Confidence                                     00                           00012578999999999999999999


Q ss_pred             HHhc
Q psy11727        423 NVLR  426 (437)
Q Consensus       423 e~l~  426 (437)
                      ++++
T Consensus       250 ~~~~  253 (257)
T cd05040         250 ALRE  253 (257)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2e-37  Score=297.99  Aligned_cols=247  Identities=24%  Similarity=0.339  Sum_probs=193.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|++.....  ....+..|+.++..+     .|+||+++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~iv~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DHPNIVKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-----CCCchheEEEEEc
Confidence            4579999999999999999998743     678899999864321  234466677777766     7899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN--------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL  240 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~--------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi  240 (437)
                      +.+.+++||||+++ +|.+++....                    ...+++..+..++.||+.||+|||.  .|++||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~--~~i~H~dl  156 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE--RKFVHRDL  156 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCeecccc
Confidence            99999999999965 8988886431                    1246788899999999999999995  48999999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFS  314 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~  314 (437)
                      ||+||++  +.++.++|+|||++.......     .....+..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       157 ~p~nil~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~  234 (288)
T cd05050         157 ATRNCLV--GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY  234 (288)
T ss_pred             cHhheEe--cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999  678889999999986543221     12234567999999998899999999999999999998 889998


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      +.+..+....+......+.                                   |                         
T Consensus       235 ~~~~~~~~~~~~~~~~~~~-----------------------------------~-------------------------  254 (288)
T cd05050         235 GMAHEEVIYYVRDGNVLSC-----------------------------------P-------------------------  254 (288)
T ss_pred             CCCHHHHHHHHhcCCCCCC-----------------------------------C-------------------------
Confidence            8776655544422100000                                   0                         


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                        ......+.+||.+||+.||.+|||+.|+++
T Consensus       255 --~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         255 --DNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             --CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence              000125789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.9e-37  Score=294.98  Aligned_cols=245  Identities=21%  Similarity=0.328  Sum_probs=193.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe---EEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC---QVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +.|++.+.||+|+||.||+|....+++   .||||.+....  .....+..|+.++..+     .||||+++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCcCcceEEEEECCCC
Confidence            468999999999999999999877664   69999986432  1233555677666655     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+++||||+++ +|.+++.... ..+++..++.++.|++.||+|||+  .|++|+||||+||++  +.++.++|+|||++
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~--~g~~H~dl~p~nili--~~~~~~kl~dfg~~  153 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSE--MNYVHRDLAARNILV--NSNLVCKVSDFGLS  153 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccChheEEE--cCCCcEEECCCccc
Confidence            99999999966 7877776543 458999999999999999999995  489999999999999  67888999999998


Q ss_pred             eecCCccc--cc---c---ccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        264 CHVGQTLY--QY---I---QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       264 ~~~~~~~~--~~---~---gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ........  ..   .   .+..|+|||++.+..++.++|||||||++|||++ |.+||...+..+....+......|..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~  233 (269)
T cd05065         154 RFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPP  233 (269)
T ss_pred             cccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCc
Confidence            65432211  11   1   1346999999999899999999999999999887 99999887776665555321111110


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      .                                                              .....+.+++.+||..+
T Consensus       234 ~--------------------------------------------------------------~~~~~~~~li~~~l~~~  251 (269)
T cd05065         234 M--------------------------------------------------------------DCPTALHQLMLDCWQKD  251 (269)
T ss_pred             c--------------------------------------------------------------cCCHHHHHHHHHHcCCC
Confidence            0                                                              00115789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.+++.
T Consensus       252 p~~Rp~~~~i~~  263 (269)
T cd05065         252 RNARPKFGQIVS  263 (269)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=5.1e-37  Score=291.96  Aligned_cols=249  Identities=26%  Similarity=0.378  Sum_probs=194.0

Q ss_pred             CeeeeceecccCceEEEEEEEcC-CCeEEEEEEecCCcc-----------cchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKKP-----------FLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~-----------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+.....           .......|+.++..    .+.|+||+++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~----~~~h~~i~~~~~   76 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKE----QLRHPNIVRYYK   76 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhh----cCCCCCeeeEEe
Confidence            47889999999999999999887 688999998863211           11122334443332    247999999999


Q ss_pred             eeeECCEEEEEEEeccC-cHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        179 HFTWKNHLCLVFELLSY-NLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~~-~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      ++...++.++||||+++ +|.+++..  .....+++..++.++.|++.+|.|||+. .|++|+||+|+||++  +.++.+
T Consensus        77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~--~~~~~~  153 (269)
T cd08528          77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIML--GEDDKV  153 (269)
T ss_pred             eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEE--CCCCcE
Confidence            99999999999999965 78887743  2234589999999999999999999963 479999999999999  678889


Q ss_pred             EEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        256 KIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       256 kL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      +|+|||.+......  .....|+..|+|||++.+..++.++|+||||+++|+|++|.+||...+.......+.+....|.
T Consensus       154 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  233 (269)
T cd08528         154 TITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL  233 (269)
T ss_pred             EEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC
Confidence            99999999765433  2345678899999999998899999999999999999999999987766555544433211110


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ..                                                             ......+.+||.+||+.
T Consensus       234 ~~-------------------------------------------------------------~~~~~~l~~li~~cl~~  252 (269)
T cd08528         234 PE-------------------------------------------------------------GMYSEDVTDVITSCLTP  252 (269)
T ss_pred             Cc-------------------------------------------------------------ccCCHHHHHHHHHHCCC
Confidence            00                                                             00001578999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy11727        414 DPKKRISPTNVLRH  427 (437)
Q Consensus       414 dP~~R~t~~e~l~H  427 (437)
                      ||++|||+.|+..+
T Consensus       253 ~p~~Rp~~~e~~~~  266 (269)
T cd08528         253 DAEARPDIIQVSAM  266 (269)
T ss_pred             CCccCCCHHHHHHH
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.9e-37  Score=306.06  Aligned_cols=202  Identities=28%  Similarity=0.431  Sum_probs=162.0

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++....  ....+..|+.++..+.    +|+||+++++++.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~   81 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT   81 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc----CCccHhhhcceee
Confidence            36899999999999999999984     34678999999974321  2334567888877764    5789999999876


Q ss_pred             EC-CEEEEEEEeccC-cHHHHHHhcC------------------------------------------------------
Q psy11727        182 WK-NHLCLVFELLSY-NLYNLIRNTN------------------------------------------------------  205 (437)
Q Consensus       182 ~~-~~~~lV~E~~~~-~L~~~l~~~~------------------------------------------------------  205 (437)
                      .. ..+++||||+++ +|.+++....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            54 578999999965 8888876431                                                      


Q ss_pred             -----------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc----
Q psy11727        206 -----------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL----  270 (437)
Q Consensus       206 -----------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~----  270 (437)
                                 ...+++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++.......    
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dikp~Nil~--~~~~~~kl~dfg~~~~~~~~~~~~~  237 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS--RKCIHRDLAARNILL--SENNVVKICDFGLARDIYKDPDYVR  237 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCccCeEEE--cCCCcEEEEecccccccccCcchhh
Confidence                       0236788889999999999999996  489999999999999  678889999999987642211    


Q ss_pred             -ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        271 -YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       271 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                       ....++..|+|||++.+..++.++|+|||||++|+|++ |..||.+...
T Consensus       238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  287 (343)
T cd05103         238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  287 (343)
T ss_pred             cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence             12234567999999999899999999999999999997 9999977543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-37  Score=298.19  Aligned_cols=207  Identities=23%  Similarity=0.361  Sum_probs=166.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCC--------------CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEE--------------KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYI  173 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~--------------~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~i  173 (437)
                      ++|++.+.||+|+||.||+|.+..+              ...||+|.++....  ....+..|+.++..+     .|+|+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i   79 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-----KNPNI   79 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCc
Confidence            5899999999999999999987543              23589999874321  223466687877766     78999


Q ss_pred             EEecceeeECCEEEEEEEeccC-cHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q psy11727        174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF----------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKP  242 (437)
Q Consensus       174 v~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~----------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp  242 (437)
                      +++++++...+..++||||+++ +|.+++.....          ..+++..+..++.|++.||+|||+  .|++||||||
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp  157 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS--LNFVHRDLAT  157 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh--cCeeccccCh
Confidence            9999999999999999999965 88888754321          136888999999999999999995  4899999999


Q ss_pred             CcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh--CCCCCCC
Q psy11727        243 ENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSG  315 (437)
Q Consensus       243 ~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~pf~~  315 (437)
                      +||++  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+|++  |..||..
T Consensus       158 ~Nill--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~  235 (295)
T cd05097         158 RNCLV--GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL  235 (295)
T ss_pred             hhEEE--cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            99999  567789999999986543221     11233568999999998899999999999999999998  6789988


Q ss_pred             CCHHHHHHHH
Q psy11727        316 KNEVDQMTKI  325 (437)
Q Consensus       316 ~~~~~~~~~i  325 (437)
                      .+..+....+
T Consensus       236 ~~~~~~~~~~  245 (295)
T cd05097         236 LSDEQVIENT  245 (295)
T ss_pred             cChHHHHHHH
Confidence            7766655544

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4.5e-37  Score=294.77  Aligned_cols=197  Identities=28%  Similarity=0.373  Sum_probs=160.4

Q ss_pred             ccCe-eeeceecccCceEEEEEE----EcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRY-EIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y-~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++| .+.+.||+|+||+||++.    ...++..||+|.++....  ....+..|+.++..+     .|+||+++++++.
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~   76 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-----YHENIVKYKGCCS   76 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEe
Confidence            3566 899999999999998864    345778999999974322  234456677777766     7899999999877


Q ss_pred             EC--CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        182 WK--NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       182 ~~--~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      ..  ..+++||||+++ +|.+++...   .+++..++.++.|++.||.|||++  ||+||||||+|||+  +.++.++|+
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~--~i~H~dlkp~Nili--~~~~~~~l~  149 (283)
T cd05080          77 EQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ--HYIHRDLAARNVLL--DNDRLVKIG  149 (283)
T ss_pred             cCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC--CeeccccChheEEE--cCCCcEEEe
Confidence            53  478999999965 788888654   389999999999999999999964  89999999999999  667889999


Q ss_pred             eCCCceecCCccc------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        259 DFGSSCHVGQTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       259 DFG~s~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      |||++........      ...++..|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus       150 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~  214 (283)
T cd05080         150 DFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP  214 (283)
T ss_pred             ecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence            9999876543221      1234567999999998889999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.6e-37  Score=292.53  Aligned_cols=194  Identities=22%  Similarity=0.289  Sum_probs=149.4

Q ss_pred             ceecccCceEEEEEEEcC------------CCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        116 TLLGKGSFGQVVKAFDHE------------EKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~------------~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      +.||+|+||+||+|....            ....||+|.+..... ....+..|..++..+     .||||+++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-----~hp~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-----SHKHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            468999999999997532            233588998764322 122334455555544     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-----CCEE
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-----SAIK  256 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-----~~ik  256 (437)
                      +...++||||+++ +|..++... ...+++..+..++.||+.||+|||++  ||+||||||+|||+..+..     ..++
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~Nill~~~~~~~~~~~~~~  152 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK--DLVHGNVCTKNILLAREGIDGECGPFIK  152 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC--CeECCCCCcccEEEecCCccCCCCceeE
Confidence            9999999999976 555555443 24589999999999999999999964  8999999999999953221     1389


Q ss_pred             EEeCCCceecCCccccccccccccChhhhc-CCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCH
Q psy11727        257 IIDFGSSCHVGQTLYQYIQSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELH-TGEPLFSGKNE  318 (437)
Q Consensus       257 L~DFG~s~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~ell-tg~~pf~~~~~  318 (437)
                      ++|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|.+||.....
T Consensus       153 l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  215 (262)
T cd05077         153 LSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL  215 (262)
T ss_pred             eCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence            9999998655332 2346788899999987 467899999999999999997 58899887543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=4e-37  Score=302.66  Aligned_cols=249  Identities=24%  Similarity=0.337  Sum_probs=194.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-------CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ..+|.+.+.||+|+||.||+|.+..       ++..||+|.++...  .....+..|+.+++.+.    .|+||++++++
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~   86 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG----KHKNIINLLGA   86 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc----CCCCeeeeeEE
Confidence            3579999999999999999997643       23479999886432  22345667888777663    58899999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +...+..++||||+++ +|.+++....              ...+++..+..++.||+.||+|||.  .|++||||||+|
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~givH~dlkp~N  164 (334)
T cd05100          87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS--QKCIHRDLAARN  164 (334)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccce
Confidence            9999999999999965 8998886532              1247888899999999999999995  489999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+.
T Consensus       165 ill--~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  242 (334)
T cd05100         165 VLV--TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV  242 (334)
T ss_pred             EEE--cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence            999  667889999999987654321     11223457999999999999999999999999999998 8999988776


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+......+.                                   +                           ..
T Consensus       243 ~~~~~~~~~~~~~~~-----------------------------------~---------------------------~~  260 (334)
T cd05100         243 EELFKLLKEGHRMDK-----------------------------------P---------------------------AN  260 (334)
T ss_pred             HHHHHHHHcCCCCCC-----------------------------------C---------------------------CC
Confidence            665555432110000                                   0                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||+.+|.+|||+.+++.+
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         261 CTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            01157899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1e-37  Score=295.34  Aligned_cols=196  Identities=21%  Similarity=0.337  Sum_probs=154.7

Q ss_pred             ceecccCceEEEEEEEcCCCeE-------EEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQ-------VAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~-------vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +.||+|+||+||+|.+..++..       ||+|.+.... .....+..|..+++.+     .|+||+++++++...+..+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-----SHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-----CCCChhheeeEEEeCCCcE
Confidence            4689999999999988665443       8888875432 1223445566665554     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC------CCEEEEeC
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR------SAIKIIDF  260 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~------~~ikL~DF  260 (437)
                      +||||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .||+||||||+||+++.+..      +.++++||
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~  152 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLED--KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP  152 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEecccccccCCCceEEeccc
Confidence            99999966 7888877654 358999999999999999999995  48999999999999964322      13799999


Q ss_pred             CCceecCCccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHH
Q psy11727        261 GSSCHVGQTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTG-EPLFSGKNEVD  320 (437)
Q Consensus       261 G~s~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~  320 (437)
                      |.+...... ....++..|+|||++.+. .++.++|+|||||++|+|++| .+||...+...
T Consensus       153 g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~  213 (258)
T cd05078         153 GISITVLPK-EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK  213 (258)
T ss_pred             ccccccCCc-hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH
Confidence            998665432 335678899999999864 589999999999999999998 57776655443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.9e-37  Score=287.50  Aligned_cols=238  Identities=26%  Similarity=0.396  Sum_probs=188.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ++||+|+||.||+|.+.. ++.||+|.+.....  ....+..|+.+++.+     .|+||+++++++...+..++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcC
Confidence            468999999999999877 89999999874332  223455677776665     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ  272 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~  272 (437)
                      .+ +|.+++.... ..+++..+..++.|++.||+|||++  |++||||||+|||+  +.++.++|+|||++.........
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~--~i~h~di~p~nili--~~~~~~~l~d~g~~~~~~~~~~~  149 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK--NCIHRDLAARNCLV--GENNVLKISDFGMSREEEGGIYT  149 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC--CEehhhcCcceEEE--cCCCcEEEeeccccccccCCcce
Confidence            65 7888886643 3588999999999999999999954  89999999999999  67888999999998765422111


Q ss_pred             -----ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchh
Q psy11727        273 -----YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY  346 (437)
Q Consensus       273 -----~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  346 (437)
                           ...+..|+|||++.+..++.++|+|||||++|+|++ |..||.+.........+......+..            
T Consensus       150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~------------  217 (251)
T cd05041         150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAP------------  217 (251)
T ss_pred             eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCC------------
Confidence                 122456999999998899999999999999999999 88999887765544443221110000            


Q ss_pred             hcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        347 FDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                                                                        ......+.+|+.+||+.+|.+|||++|+++
T Consensus       218 --------------------------------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         218 --------------------------------------------------QLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             --------------------------------------------------ccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                                                              000115789999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=7.9e-37  Score=287.32  Aligned_cols=238  Identities=26%  Similarity=0.374  Sum_probs=186.6

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ++||+|+||.||+|... ++..+|+|.+......  ...+..|+.++..+     .|+||+++++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECC
Confidence            46899999999999854 6788999998643211  22355677666655     7899999999999999999999999


Q ss_pred             cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccc
Q psy11727        194 SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ  272 (437)
Q Consensus       194 ~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~  272 (437)
                      ++ +|.+++.... ..+++..+..++.|++.||.|||+  .|++||||||+||++  +.++.+||+|||++.........
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~~H~dl~p~nili--~~~~~~~l~d~g~~~~~~~~~~~  149 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLES--KNCIHRDLAARNCLV--GENNVLKISDFGMSRQEDDGIYS  149 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccChheEEE--cCCCeEEECCCccceeccccccc
Confidence            65 7888776543 457899999999999999999995  489999999999999  67888999999998765433221


Q ss_pred             ----ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        273 ----YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       273 ----~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                          ..++..|+|||++.+..++.++|+||||+++|++++ |..||.+.........+........              
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------  215 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSC--------------  215 (250)
T ss_pred             cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCC--------------
Confidence                233457999999998889999999999999999998 9999988776655444422110000              


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                                                                      +......+.+|+.+||+.+|++|||+.++++
T Consensus       216 ------------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         216 ------------------------------------------------PQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             ------------------------------------------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                                                            0000126789999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=8.9e-37  Score=294.86  Aligned_cols=206  Identities=24%  Similarity=0.344  Sum_probs=165.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC----------------CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE----------------EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHS  170 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~----------------~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h  170 (437)
                      .++|++.+.||+|+||+||++.+..                ++..||+|.+....  .....+..|+.+++.+     .|
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-----~~   78 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-----KD   78 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CC
Confidence            3579999999999999999985432                34579999987432  1234566788887766     68


Q ss_pred             CcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q psy11727        171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNF---------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL  240 (437)
Q Consensus       171 ~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~---------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi  240 (437)
                      +||+++++++...+..++||||+++ +|.+++.....         ..+++..+..++.||+.||+|||++  |++||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~--~i~H~dl  156 (296)
T cd05095          79 PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL--NFVHRDL  156 (296)
T ss_pred             CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC--CeecccC
Confidence            9999999999999999999999964 89888865321         2367889999999999999999954  8999999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh--CCCCC
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLF  313 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~pf  313 (437)
                      ||+|||+  +.++.++|+|||++.......     ....++..|+|||+..+..++.++|+|||||++|||++  |..||
T Consensus       157 kp~Nili--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~  234 (296)
T cd05095         157 ATRNCLV--GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY  234 (296)
T ss_pred             ChheEEE--cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence            9999999  668889999999987653221     11233567999999988899999999999999999998  77999


Q ss_pred             CCCCHHHHHH
Q psy11727        314 SGKNEVDQMT  323 (437)
Q Consensus       314 ~~~~~~~~~~  323 (437)
                      ...+..+...
T Consensus       235 ~~~~~~~~~~  244 (296)
T cd05095         235 SQLSDEQVIE  244 (296)
T ss_pred             cccChHHHHH
Confidence            8766655443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.1e-36  Score=288.37  Aligned_cols=237  Identities=22%  Similarity=0.319  Sum_probs=183.3

Q ss_pred             eecccCceEEEEEEEc--CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        117 LLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      .||+|+||.||+|.+.  .++..||+|++.....  ....+..|+.+++.+     .|+||+++++++. .+..++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-----DNPYIVRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEc-CCCeEEEEEe
Confidence            3799999999999765  4556799999875422  123466777777776     7899999999876 4578999999


Q ss_pred             ccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccc
Q psy11727        193 LSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY  271 (437)
Q Consensus       193 ~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~  271 (437)
                      +++ +|.+++.... ..+++..+..++.||+.||+|||++  |++||||||+|||+  +.++.+||+|||++........
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~nil~--~~~~~~kl~dfg~~~~~~~~~~  150 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGK--NFVHRDLAARNVLL--VNQHYAKISDFGLSKALGADDS  150 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhc--CeeecccchheEEE--cCCCcEEeccCCccccccCCcc
Confidence            965 7888876533 4689999999999999999999964  89999999999999  6678899999999875432211


Q ss_pred             ------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        272 ------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       272 ------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                            ...++..|+|||++.+..++.++|+|||||++|++++ |.+||.+....+....+......+.           
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  219 (257)
T cd05115         151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDC-----------  219 (257)
T ss_pred             ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCC-----------
Confidence                  1122467999999998889999999999999999996 9999988776655444322110000           


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                         +......+.++|.+||..||++|||..++
T Consensus       220 ---------------------------------------------------~~~~~~~l~~li~~c~~~~~~~Rp~~~~i  248 (257)
T cd05115         220 ---------------------------------------------------PAECPPEMYALMKDCWIYKWEDRPNFAKV  248 (257)
T ss_pred             ---------------------------------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence                                                               00011267899999999999999999998


Q ss_pred             hc
Q psy11727        425 LR  426 (437)
Q Consensus       425 l~  426 (437)
                      .+
T Consensus       249 ~~  250 (257)
T cd05115         249 EE  250 (257)
T ss_pred             HH
Confidence            65

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.4e-37  Score=289.65  Aligned_cols=191  Identities=24%  Similarity=0.343  Sum_probs=155.7

Q ss_pred             ceecccCceEEEEEEEcCCC----------eEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEK----------CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~----------~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +.||+|+||.||+|.+..++          ..+++|.+.........+.+|+.+++.+     .|+||+++++++.. +.
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-----SHKHLVKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-----CCcchhheeeEEec-CC
Confidence            46899999999999998776          4588888764433245566677666654     78999999999888 77


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-------CEEE
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-------AIKI  257 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-------~ikL  257 (437)
                      .++||||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .||+||||||+|||++  .++       .+||
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dlkp~Nill~--~~~~~~~~~~~~kl  149 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLED--KKLVHGNVCGKNILVA--RYGLNEGYVPFIKL  149 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhh--CCeecccCccceEEEe--cCccccCCceeEEe
Confidence            8999999965 7888877654 258999999999999999999995  4899999999999995  344       6999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcCC--CCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI--PYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      +|||++..... .....++..|+|||++.+.  .++.++|+|||||++|+|++ |.+||...+.
T Consensus       150 ~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         150 SDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             CCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence            99999976644 2234567789999999876  78999999999999999999 5788877643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=6.7e-37  Score=291.42  Aligned_cols=245  Identities=26%  Similarity=0.361  Sum_probs=190.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|.+.+.||+|+||.||+|.+...   ...||||......  .....+..|+.++..+     .|+||+++++++.+ 
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~-   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-----DHPHIVKLIGVITE-   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCchhceeEEEcC-
Confidence            35688999999999999999987544   4569999886443  1233556677776665     78999999998875 


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .|++||||||+||++  +.++.++|+|||+
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~~H~dl~p~nili--~~~~~~~l~d~g~  153 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES--KRFVHRDIAARNVLV--SSPDCVKLGDFGL  153 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccChheEEE--ecCCCeEEccCce
Confidence            567899999965 8998887643 358999999999999999999995  489999999999999  5678899999999


Q ss_pred             ceecCCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      +........    ...++..|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+.    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~----  229 (270)
T cd05056         154 SRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM----  229 (270)
T ss_pred             eeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCC----
Confidence            876533211    1223457999999988889999999999999999996 9999988876655544422110000    


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                     +                       .    .....+.++|.+||.++|.+
T Consensus       230 -------------------------------~-----------------------~----~~~~~~~~li~~~l~~~P~~  251 (270)
T cd05056         230 -------------------------------P-----------------------P----NCPPTLYSLMTKCWAYDPSK  251 (270)
T ss_pred             -------------------------------C-----------------------C----CCCHHHHHHHHHHcCCChhh
Confidence                                           0                       0    00115789999999999999


Q ss_pred             CCCHHHHhc
Q psy11727        418 RISPTNVLR  426 (437)
Q Consensus       418 R~t~~e~l~  426 (437)
                      |||+.+++.
T Consensus       252 Rpt~~~~~~  260 (270)
T cd05056         252 RPRFTELKA  260 (270)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=7.4e-37  Score=307.26  Aligned_cols=250  Identities=22%  Similarity=0.328  Sum_probs=192.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+.     .++..||+|+++....  ....+..|+.++..+.    .|+|||++++++.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~----~H~niv~~~~~~~  111 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG----PHLNIVNLLGACT  111 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC----CCCCeEEEEEEEc
Confidence            456889999999999999999854     3557899999974321  1234566888877763    3899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC-------------------------------------------------------
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN-------------------------------------------------------  205 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~-------------------------------------------------------  205 (437)
                      ..+..++||||+++ +|.+++....                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            99999999999965 8998886432                                                       


Q ss_pred             -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        206 -----------------------------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       206 -----------------------------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                                                               ...+++..+..++.||+.||+|||+  .|++||||||+|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrdlkp~N  269 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS--KNCVHRDLAARN  269 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcCcccCCcce
Confidence                                                     1236778889999999999999995  489999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  ++.+.+||+|||++......     .....++..|+|||++.+..++.++|+|||||++|||++ |..||.....
T Consensus       270 iLl--~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~  347 (401)
T cd05107         270 VLI--CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM  347 (401)
T ss_pred             EEE--eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence            999  56778999999999754221     122346778999999999899999999999999999998 8999987654


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+.....+.. +..+.                                 .|                           ..
T Consensus       348 ~~~~~~~~~~-~~~~~---------------------------------~p---------------------------~~  366 (401)
T cd05107         348 NEQFYNAIKR-GYRMA---------------------------------KP---------------------------AH  366 (401)
T ss_pred             hHHHHHHHHc-CCCCC---------------------------------CC---------------------------CC
Confidence            4443332221 00000                                 00                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||..||.+|||+.++++.
T Consensus       367 ~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         367 ASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            01257899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7.8e-37  Score=292.56  Aligned_cols=247  Identities=19%  Similarity=0.287  Sum_probs=191.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|.+.....  ....+..|+.+++.+     .|+||+++++++..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~   79 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-----SHQNILPILHVCIE   79 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEec
Confidence            4689999999999999999999876    357899998864321  123344566665554     88999999998765


Q ss_pred             -CCEEEEEEEecc-CcHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        183 -KNHLCLVFELLS-YNLYNLIRNTNF------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       183 -~~~~~lV~E~~~-~~L~~~l~~~~~------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                       ....++++|+++ ++|.+++.....      ..+++..+..++.||+.||+|||+  .+++||||||+||++  ++++.
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i~H~di~p~nil~--~~~~~  155 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK--RGVIHKDIAARNCVI--DEELQ  155 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCHhhEEE--cCCCc
Confidence             578899999996 488888865422      358999999999999999999995  489999999999999  66788


Q ss_pred             EEEEeCCCceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||++........     ...++..|+|||++.+..++.++|||||||++||+++ |++||...+..+....+...
T Consensus       156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  235 (280)
T cd05043         156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG  235 (280)
T ss_pred             EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence            99999999975532211     2234667999999998899999999999999999999 99999887765544433221


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...+                                     ..                         ......+.+++.
T Consensus       236 ~~~~-------------------------------------~~-------------------------~~~~~~~~~li~  253 (280)
T cd05043         236 YRLA-------------------------------------QP-------------------------INCPDELFAVMA  253 (280)
T ss_pred             CCCC-------------------------------------CC-------------------------CcCCHHHHHHHH
Confidence            1000                                     00                         000015789999


Q ss_pred             HccccCCCCCCCHHHHhc
Q psy11727        409 RMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~  426 (437)
                      +||..||++|||+.++++
T Consensus       254 ~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         254 CCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHcCCChhhCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=5.3e-37  Score=291.66  Aligned_cols=203  Identities=22%  Similarity=0.362  Sum_probs=161.2

Q ss_pred             ceecccCceEEEEEEEcCCC------eEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEK------CQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~------~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +.||+|+||.||+|......      ..+|+|.+....  .....+..|+.++..+     .|+||+++++++...+..+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-----NHPNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-----CCCCeeeEeeeecCCCCeE
Confidence            36899999999999876543      789999886432  2234556677776655     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC---CCCEEEE
Q psy11727        188 LVFELLSY-NLYNLIRNTN-----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK---RSAIKII  258 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~-----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~---~~~ikL~  258 (437)
                      +||||+++ +|.+++....     ...+++..+..++.||+.||+|||+  .+++|+||||+||+++.+.   ...++|+
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~~~~~l~  153 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ--MHFIHRDLAARNCLVSEKGYDADRVVKIG  153 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh--CCcccCCCChheEEEecCCCCCCcceEEC
Confidence            99999965 8988886532     2347889999999999999999995  4899999999999995322   1279999


Q ss_pred             eCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        259 DFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       259 DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      |||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~  226 (269)
T cd05044         154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV  226 (269)
T ss_pred             CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH
Confidence            999986553221     12234678999999999899999999999999999998 99999887765554443

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=290.70  Aligned_cols=206  Identities=23%  Similarity=0.333  Sum_probs=167.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+|++.+.||+|+||+||+|.+..++.    .+|+|.+.....  ....+..|+.++..+     .|+||+++++++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-----DHPHVVRLLGICLS   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEec
Confidence            3579999999999999999999876664    589998864432  223455666666665     78999999999887


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       ...++||||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .|++||||||+||++  +.++.+||+|||
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~--~~i~H~di~p~nil~--~~~~~~kL~dfg  154 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEE--KRLVHRDLAARNVLV--KTPQHVKITDFG  154 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh--CCEEecccCcceEEE--cCCCeEEECCCc
Confidence             789999999964 8988887653 348999999999999999999996  489999999999999  667789999999


Q ss_pred             CceecCCccc--c---ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        262 SSCHVGQTLY--Q---YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       262 ~s~~~~~~~~--~---~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      ++........  .   ..++..|+|||.+....++.++|+|||||++||+++ |.+||.+....+....+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~  224 (279)
T cd05057         155 LAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLL  224 (279)
T ss_pred             ccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            9976543221  1   122467999999988899999999999999999999 99999987766655544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.5e-37  Score=292.34  Aligned_cols=195  Identities=21%  Similarity=0.264  Sum_probs=149.1

Q ss_pred             eecccCceEEEEEEEcC------------------------CCeEEEEEEecCCccc-chHHHHHHHHHHHhhhcCCCCC
Q psy11727        117 LLGKGSFGQVVKAFDHE------------------------EKCQVAIKIIKNKKPF-LNQAQIEVQLLEKINKADIHSR  171 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~------------------------~~~~vaiK~i~~~~~~-~~~~~~e~~~~~~l~~~~~~h~  171 (437)
                      .||+|+||.||+|....                        ....||+|++...... ...+..|..++..     +.|+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-----l~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQ-----VSHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhc-----CCCC
Confidence            58999999999997432                        1245889988643211 1233344444443     4799


Q ss_pred             cEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      ||+++++++.+....++||||+++ +|..++... ...+++..+..++.||+.||+|||+  .||+||||||+|||++..
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~Nill~~~  153 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLED--KNLVHGNVCAKNILLARL  153 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHc--CCccCCCCCcccEEEecc
Confidence            999999999999999999999976 566666543 2458999999999999999999995  489999999999999532


Q ss_pred             C-----CCCEEEEeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHH-hCCCCCCCCCHHH
Q psy11727        251 K-----RSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELH-TGEPLFSGKNEVD  320 (437)
Q Consensus       251 ~-----~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~ell-tg~~pf~~~~~~~  320 (437)
                      .     .+.+|++|||++...... ....++..|+|||.+.+ ..++.++|+|||||++|||+ +|.+||.+....+
T Consensus       154 ~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  229 (274)
T cd05076         154 GLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE  229 (274)
T ss_pred             CcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence            1     234899999988544222 23457788999999875 56899999999999999985 6999998765543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-36  Score=290.26  Aligned_cols=248  Identities=21%  Similarity=0.306  Sum_probs=194.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ++|++.+.||+|+||+||+|+.+.     +.+.||+|.+.....  ....+..|+.+++.+     .|+||+++++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-----SHKNVVRLLGLCRE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-----CCcceeeeEEEECC
Confidence            578999999999999999998654     356799998864332  235677788888776     68899999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNF-------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~-------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      .+..++||||++ ++|.+++.....       ..+++..+..++.||+.||+|||+.  ||+||||||+||++  +.++.
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~--~i~H~dlkp~Nili--~~~~~  155 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA--RFVHRDLAARNCLV--SSQRE  155 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc--CcccCcCccceEEE--eCCCc
Confidence            999999999996 489888876541       1589999999999999999999954  79999999999999  66788


Q ss_pred             EEEEeCCCceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHh
Q psy11727        255 IKIIDFGSSCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       255 ikL~DFG~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~  329 (437)
                      ++|+|||++......    .....++..|+|||.+.+..++.++||||||+++|+|++ |.+||.+.........+....
T Consensus       156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~  235 (275)
T cd05046         156 VKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK  235 (275)
T ss_pred             EEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC
Confidence            999999998644221    112345677999999988889999999999999999999 889998766554444432110


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      ...                                    +.                         .......+.++|.+
T Consensus       236 ~~~------------------------------------~~-------------------------~~~~~~~l~~~i~~  254 (275)
T cd05046         236 LEL------------------------------------PV-------------------------PEGCPSRLYKLMTR  254 (275)
T ss_pred             cCC------------------------------------CC-------------------------CCCCCHHHHHHHHH
Confidence            000                                    00                         00001257899999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q psy11727        410 MLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~H  427 (437)
                      ||+.||.+|||+.|++.+
T Consensus       255 ~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         255 CWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HcCCCcccCCCHHHHHHH
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0587|consensus

Probab=100.00  E-value=3.3e-37  Score=314.85  Aligned_cols=257  Identities=28%  Similarity=0.455  Sum_probs=214.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----C
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----K  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----~  183 (437)
                      .+.|++.+.||.|.+|.||+++...+++.+|+|+.........+.+.|..+++.+.    +|||++.++++|..     +
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~----~hpnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS----HHPNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc----CCCCcceEEEEEEEecCCCC
Confidence            46799999999999999999999999999999999877666677777888887765    89999999999874     4


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.++||||||+| +..|++++.....+.|..+.-|++.++.||.+||.+  .++|||||-.|||+  ..++.|||+|||.
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n--kviHRDikG~NiLL--T~e~~VKLvDFGv  169 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN--KVIHRDIKGQNVLL--TENAEVKLVDFGV  169 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc--ceeeecccCceEEE--eccCcEEEeeeee
Confidence            689999999955 889999887777899999999999999999999965  59999999999999  6788999999999


Q ss_pred             ceecCC---ccccccccccccChhhhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        263 SCHVGQ---TLYQYIQSRYYRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       263 s~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |.....   ...+.+||++|||||++...     .|+..+|+||||++..||.-|.||+........+-.|-   .-||.
T Consensus       170 SaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip---RNPPP  246 (953)
T KOG0587|consen  170 SAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---RNPPP  246 (953)
T ss_pred             eeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---CCCCc
Confidence            976643   33568999999999999753     47788999999999999999999999887755544442   22222


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      .+.. ..+                                                        =..+|.|||+.||..|
T Consensus       247 kLkr-p~k--------------------------------------------------------Ws~~FndFIs~cL~Kd  269 (953)
T KOG0587|consen  247 KLKR-PKK--------------------------------------------------------WSKKFNDFISTCLVKD  269 (953)
T ss_pred             cccc-hhh--------------------------------------------------------HHHHHHHHHHHHHhhc
Confidence            1110 000                                                        0126899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      -..||+..++|+|||++..
T Consensus       270 ~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  270 YEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             cccCcchhhhccCCccccc
Confidence            9999999999999999853

>KOG1026|consensus

Probab=100.00  E-value=1.2e-37  Score=319.35  Aligned_cols=211  Identities=27%  Similarity=0.401  Sum_probs=178.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..+-...+.||+|+||+||+|+-.     .+...||||.++....  ...++++|+.++..+     +|||||+++|.|.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-----~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-----QHPNIVRLLGVCR  559 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-----cCCCeEEEEEEEc
Confidence            345667889999999999999753     2446799999985543  356788999999887     7899999999999


Q ss_pred             ECCEEEEEEEec-cCcHHHHHHhcC--------CC----CCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        182 WKNHLCLVFELL-SYNLYNLIRNTN--------FH----GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       182 ~~~~~~lV~E~~-~~~L~~~l~~~~--------~~----~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      .++-+|+|+||| .|+|.++|....        ..    +++..+...|+.|||.|+.||.++  .+|||||-..|+|| 
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~--~FVHRDLATRNCLV-  636 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH--HFVHRDLATRNCLV-  636 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--cccccchhhhhcee-
Confidence            999999999999 569999986532        11    278899999999999999999865  59999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCccccccc-----cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQTLYQYIQ-----SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                       .++..|||+|||+++..-...+...+     ...|||||.|...+||++|||||+||+|||+++ |..||.+-++.+.+
T Consensus       637 -ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI  715 (774)
T KOG1026|consen  637 -GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI  715 (774)
T ss_pred             -ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH
Confidence             67889999999999876443333233     356999999999999999999999999999999 99999999999998


Q ss_pred             HHHHHH
Q psy11727        323 TKIIEV  328 (437)
Q Consensus       323 ~~i~~~  328 (437)
                      +.|.++
T Consensus       716 e~i~~g  721 (774)
T KOG1026|consen  716 ECIRAG  721 (774)
T ss_pred             HHHHcC
Confidence            888653

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1e-36  Score=292.54  Aligned_cols=195  Identities=28%  Similarity=0.397  Sum_probs=160.2

Q ss_pred             CeeeeceecccCceEEEEEEE----cCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFD----HEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      -|++.+.||+|+||.||+|..    ..++..||+|.++...  .....+..|+.+++.+     .|+||+++.+++... 
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   79 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKYKGICTEDG   79 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEecCC
Confidence            368899999999999999974    4578899999986432  2234566788777766     789999999998875 


Q ss_pred             -CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 -NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 -~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       ...++||||++| +|.+++.... ..+++..+..++.||+.||+|||+  .|++||||||+||++  +.++.++|+|||
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~--~gi~H~dlkp~Nil~--~~~~~~~l~dfg  154 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLV--ESEHQVKIGDFG  154 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccchheEEE--cCCCCEEECCCc
Confidence             678999999965 7888886543 358999999999999999999995  489999999999999  567889999999


Q ss_pred             CceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        262 SSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       262 ~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ++.......      ....++..|+|||++.+..++.++|||||||++|+|+++..|+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~  214 (284)
T cd05079         155 LTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESS  214 (284)
T ss_pred             cccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcc
Confidence            987653321      123456679999999988999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0695|consensus

Probab=100.00  E-value=2.4e-37  Score=285.54  Aligned_cols=255  Identities=26%  Similarity=0.473  Sum_probs=209.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|.+.++||+|+|++|.+++.++|.+.+|+|++++.    ....+..+.|..+.+...    .||.+|-++.+|+...
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as----n~pflvglhscfqtes  324 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NNPFLVGLHSCFQTES  324 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc----CCCeEEehhhhhcccc
Confidence            46899999999999999999999999999999999743    344566778888887764    7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+++|.||++| +|.-.+..+  ..++++.++.+...|+.||.|||+  .|||.||||.+|||+  |..|+|||+|+|++
T Consensus       325 rlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~--rgiiyrdlkldnvll--daeghikltdygmc  398 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHE--RGIIYRDLKLDNVLL--DAEGHIKLTDYGMC  398 (593)
T ss_pred             eEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhh--cCeeeeeccccceEE--ccCCceeecccchh
Confidence            99999999976 554444444  359999999999999999999995  599999999999999  88999999999998


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC-------CCHHHH-HHHHHHHhCCC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG-------KNEVDQ-MTKIIEVLGMP  332 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~-------~~~~~~-~~~i~~~~~~p  332 (437)
                      +.-   +...+++|||+.|+|||++.+..|...+|+|+|||+++||+.|+.||.-       .+.++. ++-|.+.    
T Consensus       399 ke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek----  474 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK----  474 (593)
T ss_pred             hcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh----
Confidence            653   5667889999999999999999999999999999999999999999953       122222 3333332    


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                                                      +.++|+..+.                           .....++..|+
T Consensus       475 --------------------------------qiriprslsv---------------------------kas~vlkgfln  495 (593)
T KOG0695|consen  475 --------------------------------QIRIPRSLSV---------------------------KASHVLKGFLN  495 (593)
T ss_pred             --------------------------------cccccceeeh---------------------------hhHHHHHHhhc
Confidence                                            1222222111                           34578899999


Q ss_pred             cCCCCCCC------HHHHhcCCCcCcCCCC
Q psy11727        413 YDPKKRIS------PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       413 ~dP~~R~t------~~e~l~Hp~~~~~~~~  436 (437)
                      .||.+|..      ..++-.||||+..++|
T Consensus       496 kdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  496 KDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             CCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            99999976      5788999999977664

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.8e-36  Score=286.97  Aligned_cols=239  Identities=21%  Similarity=0.295  Sum_probs=178.7

Q ss_pred             ceecccCceEEEEEEEcC---CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee-ECCEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT-WKNHLCLV  189 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~-~~~~~~lV  189 (437)
                      +.||+|+||+||+|.+..   ++..||+|.+....  .....+..|+.+++.     +.||||+++++++. .++..++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-----l~h~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKD-----FSHPNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHcc-----CCCCCcceEEEEeecCCCCcEEE
Confidence            468999999999998653   34679999885322  112344445555444     48999999999765 45578999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+.+ +|.+++.... ...++..+..++.||+.||+|||+  .|++||||||+|||+  +.++.+||+|||++.....
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlk~~nili--~~~~~~kl~dfg~~~~~~~  150 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS--KKFVHRDLAARNCML--DESFTVKVADFGLARDIYD  150 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEE--cCCCcEEECCccccccccC
Confidence            999964 8888886543 346778888999999999999995  489999999999999  6678899999999875432


Q ss_pred             cc-------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        269 TL-------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       269 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ..       ....++..|+|||++.+..++.++|||||||++|||++ |.+||...+..+....+......+.       
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  223 (262)
T cd05058         151 KEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ-------  223 (262)
T ss_pred             CcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC-------
Confidence            11       12344668999999998899999999999999999999 5788887665554433321100000       


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                  +                        .   .....+.+++.+||..+|++|||
T Consensus       224 ----------------------------~------------------------~---~~~~~~~~li~~cl~~~p~~Rp~  248 (262)
T cd05058         224 ----------------------------P------------------------E---YCPDPLYEVMLSCWHPKPEMRPT  248 (262)
T ss_pred             ----------------------------C------------------------C---cCCHHHHHHHHHHcCCChhhCCC
Confidence                                        0                        0   00015789999999999999999


Q ss_pred             HHHHhc
Q psy11727        421 PTNVLR  426 (437)
Q Consensus       421 ~~e~l~  426 (437)
                      +.++++
T Consensus       249 ~~~il~  254 (262)
T cd05058         249 FSELVS  254 (262)
T ss_pred             HHHHHH
Confidence            999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.8e-36  Score=287.02  Aligned_cols=202  Identities=20%  Similarity=0.276  Sum_probs=155.8

Q ss_pred             ceecccCceEEEEEEEcC--CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHE--EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||+||+|....  ....+|+|.+.....  ....+..|+.+++.+     .|+||+++++.+...+.+++|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~h~nii~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-----NHPNVLQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-----CCCCcceEEEEECCCCceEEEEE
Confidence            358999999999996433  445788888753321  122344566665544     78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        192 LLSY-NLYNLIRNTNF---HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~---~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |+++ +|.+++.....   ...++..+..++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill--~~~~~~kl~dfg~~~~~~  151 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ--ADFIHSDLALRNCQL--TADLSVKIGDYGLALEQY  151 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh--cCEecccccHhheEe--cCCCcEEEeccccccccc
Confidence            9965 89888866432   234678889999999999999995  489999999999999  678889999999986532


Q ss_pred             Cc-----cccccccccccChhhhcC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        268 QT-----LYQYIQSRYYRSPEVLLG-------IPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       268 ~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      ..     .....++..|+|||++..       ..++.++|||||||++|||++ |.+||......+.+..+.
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  223 (269)
T cd05042         152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV  223 (269)
T ss_pred             cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence            21     112234567999999753       356789999999999999999 789998877666555543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=5e-36  Score=285.38  Aligned_cols=198  Identities=21%  Similarity=0.274  Sum_probs=155.6

Q ss_pred             ceecccCceEEEEEEEc--CCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      +.||+|+||.||+|...  .++..+|+|.++.....  ...+..|+.++..+     .|+||+++++++.+....++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-----QHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEcCCCCcEEEEE
Confidence            36899999999999754  35567999988744321  22455566666655     78999999999999999999999


Q ss_pred             eccC-cHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        192 LLSY-NLYNLIRNTN---FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~---~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |+++ +|.+++....   ....++..+..++.|++.||+|||+  .|++||||||+||++  +.++.++|+|||++....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dlkp~nil~--~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK--NNFIHSDLALRNCLL--TADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEE--cCCCcEEECCcccccccc
Confidence            9964 8888886532   1235677888999999999999995  489999999999999  667889999999986543


Q ss_pred             Ccc-----ccccccccccChhhhcCC-------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        268 QTL-----YQYIQSRYYRSPEVLLGI-------PYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       268 ~~~-----~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                      ...     ....++..|+|||++.+.       .++.++|+|||||++|||++ |.+||......+..
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  219 (269)
T cd05087         152 KEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL  219 (269)
T ss_pred             CcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH
Confidence            221     123457789999998642       35789999999999999996 99999876655443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG1095|consensus

Probab=100.00  E-value=9.5e-37  Score=323.03  Aligned_cols=249  Identities=23%  Similarity=0.353  Sum_probs=202.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC-----eEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK-----CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ...-++.+.||+|+||.||.|......     ..||||.++...   +....+..+.|.+.+.++.|||||+++|.+.+.
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~---~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS---SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS  767 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence            345778899999999999999765432     248999887432   344445556666666777999999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTN-----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~-----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      ...+|++|||. |+|..+|++.+     ...++......|+.|||+|+.||+++  ++|||||...|+||  +.+..+||
T Consensus       768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~--~fvHRDLAaRNCLL--~~~r~VKI  843 (1025)
T KOG1095|consen  768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK--HFVHRDLAARNCLL--DERRVVKI  843 (1025)
T ss_pred             CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC--CCcCcchhhhheee--cccCcEEE
Confidence            99999999995 58999998762     23589999999999999999999964  79999999999999  67789999


Q ss_pred             EeCCCceecCCccccccc-----cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        258 IDFGSSCHVGQTLYQYIQ-----SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      +|||+|+.+....+...+     ...|||||.+..+.++.++|||||||+|||++| |..||.+.+..+.+.-.++.-.+
T Consensus       844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL  923 (1025)
T KOG1095|consen  844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL  923 (1025)
T ss_pred             cccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc
Confidence            999999855433332222     246999999999999999999999999999999 99999999999888877665444


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      +++..++                                                              ..+.+++..||
T Consensus       924 ~~P~~CP--------------------------------------------------------------~~ly~lM~~CW  941 (1025)
T KOG1095|consen  924 DPPSYCP--------------------------------------------------------------EKLYQLMLQCW  941 (1025)
T ss_pred             CCCCCCC--------------------------------------------------------------hHHHHHHHHHc
Confidence            4433322                                                              14679999999


Q ss_pred             ccCCCCCCCHHHHhc
Q psy11727        412 TYDPKKRISPTNVLR  426 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~  426 (437)
                      ..+|++||+...+++
T Consensus       942 ~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  942 KHDPEDRPSFRTIVE  956 (1025)
T ss_pred             cCChhhCccHHHHHh
Confidence            999999999998886

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.2e-36  Score=288.10  Aligned_cols=196  Identities=27%  Similarity=0.397  Sum_probs=159.7

Q ss_pred             cCeeeeceecccCceEEEEEE----EcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--  182 (437)
                      .+|++.+.||+|+||+||+|.    +..++..||+|.+..... ....+..|+.++..+     .|+||+++++++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-----QHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEEccCC
Confidence            478999999999999999997    445788999999864432 234566788877765     78999999997653  


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ...+++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+  .||+||||||+||++  ++++.+||+|||
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~--~~i~H~dlkp~nili--~~~~~~~l~dfg  153 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGS--KRYVHRDLATRNILV--ESENRVKIGDFG  153 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHhhEEE--CCCCeEEECCCc
Confidence            357899999996 48998886543 358999999999999999999995  489999999999999  677889999999


Q ss_pred             CceecCCccc------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        262 SSCHVGQTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       262 ~s~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ++........      ...++..|+|||++.+..++.++|+|||||++|||++|..|+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~  213 (284)
T cd05081         154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS  213 (284)
T ss_pred             ccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence            9976533211      11234469999999988999999999999999999999877654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1151|consensus

Probab=100.00  E-value=5.8e-38  Score=298.61  Aligned_cols=273  Identities=28%  Similarity=0.376  Sum_probs=203.5

Q ss_pred             ecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHH---HHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ---IEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       103 ~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~---~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .....+.++|-++.+||+|||+.||+|.+...++.||+|+-...+.+.++-.   .....-+.-.|..++||.||+++++
T Consensus       456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDy  535 (775)
T KOG1151|consen  456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDY  535 (775)
T ss_pred             ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeee
Confidence            4455678899999999999999999999999999999999764433322211   1222233333555699999999999


Q ss_pred             ee-ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEE
Q psy11727        180 FT-WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKI  257 (437)
Q Consensus       180 ~~-~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL  257 (437)
                      |. +.+.+|-|+|||+|+-+++..+.. ..+++..++.|+.||+.||.||......|||-||||.||||.+. ..|.|||
T Consensus       536 fslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI  614 (775)
T KOG1151|consen  536 FSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI  614 (775)
T ss_pred             eeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence            97 567899999999986555444433 45999999999999999999999877889999999999999643 2478999


Q ss_pred             EeCCCceecCCcc----------ccccccccccChhhhcCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy11727        258 IDFGSSCHVGQTL----------YQYIQSRYYRSPEVLLGI----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT  323 (437)
Q Consensus       258 ~DFG~s~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~  323 (437)
                      +|||+++.+....          ....||.+|++||.+.-.    ..+.++||||+|||+|.++.|+-||..+-.   .+
T Consensus       615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---QQ  691 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---QQ  691 (775)
T ss_pred             eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---HH
Confidence            9999998764432          235789999999998643    467899999999999999999999975422   22


Q ss_pred             HHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHH
Q psy11727        324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKF  403 (437)
Q Consensus       324 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (437)
                      .|.+......                             .....                +|.     .|..+.    +.
T Consensus       692 dILqeNTIlk-----------------------------AtEVq----------------FP~-----KPvVss----eA  717 (775)
T KOG1151|consen  692 DILQENTILK-----------------------------ATEVQ----------------FPP-----KPVVSS----EA  717 (775)
T ss_pred             HHHhhhchhc-----------------------------ceecc----------------CCC-----CCccCH----HH
Confidence            2322111000                             00000                000     011111    45


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       404 ~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      ++||++||++--++|+...++..||+|..+
T Consensus       718 kaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  718 KAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             HHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            899999999999999999999999999754

>KOG0194|consensus

Probab=100.00  E-value=3.7e-37  Score=306.03  Aligned_cols=245  Identities=23%  Similarity=0.361  Sum_probs=196.5

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe---E-EEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC---Q-VAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~---~-vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ++-.+.++||+|+||.||+|..+..+.   . ||+|..+.+    .....++..|.++++.+     .|||||+++|+..
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-----~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-----NHPNVVRFYGVAV  231 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEc
Confidence            345567999999999999998765422   3 899998742    22344556677777765     8999999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      ....++||||+|.| +|.++|++.. ..++..+...++.+.+.||+|||++  ++|||||-..|+|+  ..++.+||+||
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k--~~IHRDIAARNcL~--~~~~~vKISDF  306 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK--NCIHRDIAARNCLY--SKKGVVKISDF  306 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC--CCcchhHhHHHhee--cCCCeEEeCcc
Confidence            99999999999955 8999998875 3699999999999999999999975  69999999999999  55667899999


Q ss_pred             CCceecCCccccc---cccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH-HhCCCChh
Q psy11727        261 GSSCHVGQTLYQY---IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIE-VLGMPPGY  335 (437)
Q Consensus       261 G~s~~~~~~~~~~---~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~-~~~~p~~~  335 (437)
                      |+|+.........   .-...|+|||.+....|+.++|||||||++||+++ |..||.+....+..++|.. ...+++..
T Consensus       307 GLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~  386 (474)
T KOG0194|consen  307 GLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS  386 (474)
T ss_pred             ccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC
Confidence            9987654221111   12367999999999999999999999999999999 8899999999988888843 33333211


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                    .....+..++.+|+..||
T Consensus       387 --------------------------------------------------------------~~p~~~~~~~~~c~~~~p  404 (474)
T KOG0194|consen  387 --------------------------------------------------------------KTPKELAKVMKQCWKKDP  404 (474)
T ss_pred             --------------------------------------------------------------CCHHHHHHHHHHhccCCh
Confidence                                                                          011146788999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      +.|||+.++.+
T Consensus       405 ~~R~tm~~i~~  415 (474)
T KOG0194|consen  405 EDRPTMSTIKK  415 (474)
T ss_pred             hhccCHHHHHH
Confidence            99999988763

>KOG0664|consensus

Probab=100.00  E-value=2.3e-38  Score=285.21  Aligned_cols=281  Identities=29%  Similarity=0.499  Sum_probs=216.3

Q ss_pred             eeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-----
Q psy11727        113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-----  184 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-----  184 (437)
                      +-.+.||-|+||.||.+.+..+|+.||+|.+.+-.   ...+++.+|..++.-.     .|.|++..++..+...     
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-----kHdNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-----RHDNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-----ccccHHHHHHhcCCCCchHHH
Confidence            34568899999999999999999999999886432   2245666788777766     6677888777766442     


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .+|+|+|+|..+|...+...  +.++.+.++.|.+||+++|.|||+.  +|.||||||.|.|+  +.+..+||+|||+++
T Consensus       131 EiYV~TELmQSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA--~ILHRDIKPGNLLV--NSNCvLKICDFGLAR  204 (449)
T KOG0664|consen  131 ELYVLTELMQSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA--NILHRDIKPGNLLV--NSNCILKICDFGLAR  204 (449)
T ss_pred             HHHHHHHHHHhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc--chhhccCCCccEEe--ccCceEEeccccccc
Confidence            57889999988888877664  4699999999999999999999964  79999999999999  778899999999998


Q ss_pred             ecCC----ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQ----TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ....    .++..+-|.+|+|||+++|. .|+.++||||.|||+.|++-.+.+|...+..++++.|.+.+|.|..+-+..
T Consensus       205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~  284 (449)
T KOG0664|consen  205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY  284 (449)
T ss_pred             ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence            6643    33445668899999999986 599999999999999999999999999999999999999999999877754


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                      +-...+-  ++      ++     ..-..|....|-.+-            ++.    ...-+..+++.+||.+||++|+
T Consensus       285 ACEGAk~--H~------LR-----~~~k~Ps~~vLYtls------------S~~----~~~heav~~~~~~l~~d~dkri  335 (449)
T KOG0664|consen  285 ACEGAKN--HV------LR-----AGLRAPDTQRLYKIA------------SPD----DKNHEAVDLLQKLLHFDPDKRI  335 (449)
T ss_pred             HhhhhHH--Hh------hc-----cCCCCCCccceeeec------------CCc----ccchHHHHHHHHHhCCCCcccc
Confidence            4332110  00      00     000111111111110            000    0111457899999999999999


Q ss_pred             CHHHHhcCCCcCcC
Q psy11727        420 SPTNVLRHEFFLKH  433 (437)
Q Consensus       420 t~~e~l~Hp~~~~~  433 (437)
                      +..+++.|+++.+.
T Consensus       336 s~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  336 SVEEALQHRYLEEG  349 (449)
T ss_pred             cHhhhccccccccc
Confidence            99999999998764

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=3.7e-36  Score=291.71  Aligned_cols=201  Identities=22%  Similarity=0.294  Sum_probs=160.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|++.+.||+|+||.||+|.+..++.    .||+|.+......  ...+..|+.++..+     .|+||+++++++...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~~~   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-----DHPHLVRLLGVCLSP   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcccEEEEEcCC
Confidence            568899999999999999999877775    4788888643211  12344566655554     789999999988754


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                       ..++++||++ |+|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||+
T Consensus        82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~--~ivH~dikp~Nill--~~~~~~kL~Dfg~  155 (303)
T cd05110          82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER--RLVHRDLAARNVLV--KSPNHVKITDFGL  155 (303)
T ss_pred             -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc--Ceeccccccceeee--cCCCceEEccccc
Confidence             5679999996 47888877643 3588999999999999999999964  89999999999999  5677899999999


Q ss_pred             ceecCCccc-----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q psy11727        263 SCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQ  321 (437)
Q Consensus       263 s~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~  321 (437)
                      +........     ...++..|+|||++.+..++.++|||||||++|||++ |..||.+......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~  220 (303)
T cd05110         156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI  220 (303)
T ss_pred             cccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            976532211     2234668999999999899999999999999999998 9999987664443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.5e-36  Score=286.14  Aligned_cols=197  Identities=26%  Similarity=0.368  Sum_probs=163.4

Q ss_pred             cCeeeeceecccCceEEEEEEEc----CCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDH----EEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~----~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-  182 (437)
                      ..|.+.+.||+|+||.||+|...    .++..||+|.+......  ...+..|+.+++.+     .|+||+++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-----~~~~i~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-----DHENIVKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-----CCCChheEEeeeecC
Confidence            46788899999999999999854    34789999999755432  45667777777765     68899999999887 


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       ..+.++||||+++ +|.+++.... ..+++..+..++.||+.||+|||+  .|++|+||||+||++  +.++.++|+||
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~nil~--~~~~~~~l~df  153 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGS--QRYIHRDLAARNILV--ESEDLVKISDF  153 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEE--cCCCCEEEccc
Confidence             5689999999965 8988887654 358999999999999999999995  489999999999999  66788999999


Q ss_pred             CCceecCCccc------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        261 GSSCHVGQTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       261 G~s~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      |.+........      ...++..|+|||.+.+..++.++|+|||||+++||++|..||...
T Consensus       154 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~  215 (284)
T cd05038         154 GLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSP  215 (284)
T ss_pred             ccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence            99976652211      123345699999999889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.1e-35  Score=283.20  Aligned_cols=245  Identities=20%  Similarity=0.281  Sum_probs=186.2

Q ss_pred             eeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-  184 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-  184 (437)
                      |.+.+.||+|+||.||+|...   .++..||||++....   ....++..|+.+++.+     .||||+++++++...+ 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-----DHPNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-----CCCCcceEEEEEccCCC
Confidence            567889999999999999864   357899999986432   1233455677766665     7899999999886532 


Q ss_pred             -----EEEEEEEecc-CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        185 -----HLCLVFELLS-YNLYNLIRNTN----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       185 -----~~~lV~E~~~-~~L~~~l~~~~----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                           ..++++||+. ++|.+++....    ...+++..+..++.||+.||+|||+  .||+||||||+||++  +.++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~nili--~~~~~  151 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS--KNFIHRDLAARNCML--NENMT  151 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccchhhEEE--cCCCC
Confidence                 3578899995 47777764322    1247889999999999999999995  489999999999999  66788


Q ss_pred             EEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||++.......     ....++..|++||.+.+..++.++|||||||++|+|++ |++||.+.+..+....+...
T Consensus       152 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05074         152 VCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG  231 (273)
T ss_pred             EEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999987653221     12234567999999998899999999999999999999 89999887765554444321


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...+.                                                              .......+.+++.
T Consensus       232 ~~~~~--------------------------------------------------------------~~~~~~~~~~l~~  249 (273)
T cd05074         232 NRLKQ--------------------------------------------------------------PPDCLEDVYELMC  249 (273)
T ss_pred             CcCCC--------------------------------------------------------------CCCCCHHHHHHHH
Confidence            00000                                                              0000125789999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q psy11727        409 RMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~H  427 (437)
                      +||+.+|.+|||+.+++++
T Consensus       250 ~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         250 QCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=2.1e-35  Score=281.16  Aligned_cols=201  Identities=19%  Similarity=0.258  Sum_probs=154.3

Q ss_pred             eecccCceEEEEEEEcCC--CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        117 LLGKGSFGQVVKAFDHEE--KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~--~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      .||+|+||.||+|....+  ...+++|.+.....  ....+..|+.++..     +.||||+++++.+.+....|+||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-----l~h~~iv~~~~~~~~~~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRI-----LQHPNILQCLGQCVEAIPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhc-----cCCcchhheEEEecCCCccEEEEec
Confidence            589999999999975433  33566777653321  12344555555544     4799999999999999999999999


Q ss_pred             ccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC-
Q psy11727        193 LSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-  268 (437)
Q Consensus       193 ~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~-  268 (437)
                      +++ +|.+++....  ....++..++.++.||+.||+|||+  .+++||||||+|||+  +.++.++|+|||++..... 
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nil~--~~~~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK--HNFLHSDLALRNCFL--TSDLTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCeeccCCccceEEE--cCCccEEecccccccccCcc
Confidence            975 8988887542  2346777888999999999999995  489999999999999  6788899999999854321 


Q ss_pred             ----ccccccccccccChhhhcC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        269 ----TLYQYIQSRYYRSPEVLLG-------IPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       269 ----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                          ......++..|+|||++..       ..++.++|||||||++|||++ |.+||...+..+.+..+.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  222 (268)
T cd05086         153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI  222 (268)
T ss_pred             hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence                1123467889999999853       346789999999999999997 578998777666555543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG4250|consensus

Probab=100.00  E-value=9.4e-37  Score=306.14  Aligned_cols=200  Identities=30%  Similarity=0.404  Sum_probs=169.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC----
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK----  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~----  183 (437)
                      .-+...+.||+||||.||+++++.+|+.||||.+++..  ...+...+|+.+++++     .|+|||++++.-++.    
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-----nh~NIVk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-----NHPNIVKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-----CchhhhhhcccCCccccCc
Confidence            34677889999999999999999999999999997533  2234556799999988     578999999976543    


Q ss_pred             --CEEEEEEEecc-CcHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC--CCCEEE
Q psy11727        184 --NHLCLVFELLS-YNLYNLIRN-TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK--RSAIKI  257 (437)
Q Consensus       184 --~~~~lV~E~~~-~~L~~~l~~-~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~--~~~ikL  257 (437)
                        +...+|||||. |+|+..+.. .+..|+++...+.+...++.||.|||.+  |||||||||.||++-..+  ....||
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn--~IvHRDlKP~NIvl~~Gedgq~IyKL  165 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN--GIVHRDLKPGNIVLQIGEDGQSIYKL  165 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCcEEEeecCCCceEEee
Confidence              46789999995 589988865 4557899999999999999999999954  899999999999985433  345899


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      +|||.|+...+.  ..+.+||+.|.+||++.. +.|+..+|.|||||++|++.||..||...
T Consensus       166 tDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  166 TDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             ecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            999999987544  457899999999999995 78999999999999999999999999543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.3e-35  Score=298.70  Aligned_cols=204  Identities=24%  Similarity=0.366  Sum_probs=152.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEc----------------CCCeEEEEEEecCCccc---------------chHHHHHH
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH----------------EEKCQVAIKIIKNKKPF---------------LNQAQIEV  157 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~----------------~~~~~vaiK~i~~~~~~---------------~~~~~~e~  157 (437)
                      .++|.+.++||+|+||+||+|...                ..++.||||.+......               .+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            568999999999999999999752                24567999998643211               12233466


Q ss_pred             HHHHHhhhcCCCCCcEEEecceeeE--------CCEEEEEEEeccC-cHHHHHHhcC----------------------C
Q psy11727        158 QLLEKINKADIHSRYIVKLKGHFTW--------KNHLCLVFELLSY-NLYNLIRNTN----------------------F  206 (437)
Q Consensus       158 ~~~~~l~~~~~~h~~iv~l~~~~~~--------~~~~~lV~E~~~~-~L~~~l~~~~----------------------~  206 (437)
                      .++.++.+.++.+.++++++++|..        .+..+|||||+++ +|.+++....                      .
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            6666776666666677888887753        3578999999965 7888775421                      0


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc--cc--ccccccccCh
Q psy11727        207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL--YQ--YIQSRYYRSP  282 (437)
Q Consensus       207 ~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~--~~--~~gt~~y~aP  282 (437)
                      ..+++..++.++.|++.+|.|||+  .+|+||||||+|||+  +.++.+||+|||++.......  ..  ..+++.|+||
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~--~~ivHrDLKp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHR--IGIVHRDIKPENLLV--TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCchHhEEE--CCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            124677889999999999999995  489999999999999  667889999999986543221  11  2347899999


Q ss_pred             hhhcCCC--------------------CC--CcchHHHHHHHHHHHHhCCC-CCCCC
Q psy11727        283 EVLLGIP--------------------YD--LAIDMWSLGCILVELHTGEP-LFSGK  316 (437)
Q Consensus       283 E~~~~~~--------------------~~--~~~DvwSlG~il~elltg~~-pf~~~  316 (437)
                      |++....                    |+  .+.|+||+||++|+|++|.. ||.+.
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~  436 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI  436 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence            9986432                    11  24799999999999999985 77653

>KOG1006|consensus

Probab=100.00  E-value=2.6e-37  Score=277.45  Aligned_cols=260  Identities=25%  Similarity=0.361  Sum_probs=197.6

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+-...||.|+||+|++-..+.+|+..|||.|+....  ...++..|+....+    .-..||||+++|....++.-+|-
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mk----s~~cp~IVkfyGa~F~EGdcWiC  141 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMK----SSNCPNIVKFYGALFSEGDCWIC  141 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHh----hcCCcHHHHHhhhhhcCCceeee
Confidence            3345678999999999999999999999999974332  12333334433332    23778999999999888999999


Q ss_pred             EEeccCcHHHHH---HhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        190 FELLSYNLYNLI---RNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       190 ~E~~~~~L~~~l---~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||+|.-++..+.   -......++++.+-.|......||.||.. ++.|||||+||+|||+  +..|.|||||||.+-.+
T Consensus       142 MELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~-~lkiIHRDvKPSNILl--dr~G~vKLCDFGIcGqL  218 (361)
T KOG1006|consen  142 MELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE-ELKIIHRDVKPSNILL--DRHGDVKLCDFGICGQL  218 (361)
T ss_pred             HHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH-HhhhhhccCChhheEE--ecCCCEeeecccchHhH
Confidence            999987654433   22222458999999999999999999976 4789999999999999  88999999999998766


Q ss_pred             CCcc--ccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTL--YQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKN-EVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~--~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      -...  +...|.+.|||||.+..  .+|+.+|||||||++|||+.||..|+.+-+ ..+++.+++  .|-||....+.  
T Consensus       219 v~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~l~~~~--  294 (361)
T KOG1006|consen  219 VDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPILLFDK--  294 (361)
T ss_pred             HHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCeecCcc--
Confidence            4332  33578889999999964  469999999999999999999999998643 334444443  34444221110  


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                           +.......+..||.-||..|-..||+-
T Consensus       295 -----------------------------------------------------~~~~~s~~~~~fintCl~Kd~~~Rpky  321 (361)
T KOG1006|consen  295 -----------------------------------------------------ECVHYSFSMVRFINTCLIKDRSDRPKY  321 (361)
T ss_pred             -----------------------------------------------------cccccCHHHHHHHHHHhhcccccCcch
Confidence                                                                 001111267899999999999999999


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      .+++++||+...+.
T Consensus       322 ~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  322 DDLKKFPFYRMYAV  335 (361)
T ss_pred             hhhhcCchhhhhhh
Confidence            99999999976543

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=3.5e-34  Score=266.15  Aligned_cols=238  Identities=37%  Similarity=0.559  Sum_probs=192.1

Q ss_pred             CceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHH
Q psy11727        122 SFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLY  198 (437)
Q Consensus       122 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~  198 (437)
                      +||.||+|....+++.+|+|++......  ...+..|+..+..+     .|++|+++.+++......+++||++++ +|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-----CCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            6899999999988999999999754322  35667777777766     788999999999999999999999977 899


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC--cccccccc
Q psy11727        199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ--TLYQYIQS  276 (437)
Q Consensus       199 ~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~--~~~~~~gt  276 (437)
                      +++....  .+++..+..++.+++.++.+||..  |++|+||+|.||++  +.++.++|+|||.+.....  ......++
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~--~i~h~~i~~~ni~~--~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  149 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSN--GIIHRDLKPENILL--DEDGHVKLADFGLARQLDPGGLLTTFVGT  149 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc--CeecCCcCHHHeEE--CCCCcEEEccccceeeeccccccccccCC
Confidence            8887654  289999999999999999999964  89999999999999  5678899999999987655  33456778


Q ss_pred             ccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcc
Q psy11727        277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSY  355 (437)
Q Consensus       277 ~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  355 (437)
                      ..|+|||.+.+..++.++|+||||++++++++|..||.. .+.......+......+...                    
T Consensus       150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------  209 (244)
T smart00220      150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP--------------------  209 (244)
T ss_pred             cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccc--------------------
Confidence            899999999988899999999999999999999999987 43333333222110000000                    


Q ss_pred             eeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCc
Q psy11727        356 VLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF  430 (437)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~  430 (437)
                                                              .......+.+++.+||..||++|||+.++++||||
T Consensus       210 ----------------------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      210 ----------------------------------------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ----------------------------------------cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence                                                    00001257899999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2.4e-34  Score=320.45  Aligned_cols=189  Identities=22%  Similarity=0.296  Sum_probs=155.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ..|...+.||+|+||.||+|.+..++..||+|.+.....   ....|+..+..+     +|||||++++++.+.+..++|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l-----~HpnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL-----QHPNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC-----CCCCcceEEEEEEcCCCCEEE
Confidence            456777899999999999999989999999999864332   223345555444     899999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC-CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP-ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~-~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||+++ +|.+++..     +++..+..++.||+.||+|||.+ ..+|+||||||+||++  +.++..++. ||.+....
T Consensus       762 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~--~~~~~~~~~-~~~~~~~~  833 (968)
T PLN00113        762 HEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII--DGKDEPHLR-LSLPGLLC  833 (968)
T ss_pred             EeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE--CCCCceEEE-eccccccc
Confidence            999965 88888853     78999999999999999999964 4589999999999999  555556654 55543322


Q ss_pred             CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       268 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      . .....+|..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus       834 ~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        834 T-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             c-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence            1 1234678999999999999999999999999999999999999953

>KOG1027|consensus

Probab=100.00  E-value=3.9e-36  Score=305.70  Aligned_cols=248  Identities=32%  Similarity=0.431  Sum_probs=193.1

Q ss_pred             eeeeceecccCceE-EEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        112 YEIDTLLGKGSFGQ-VVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       112 y~i~~~lG~G~fg~-V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      |.-.+++|.|+.|+ ||+|..  +|+.||||.+-  ......+.+|+..+..-.    .|||||++++.-.++.+.||..
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll--~e~~~~A~rEi~lL~eSD----~H~NviRyyc~E~d~qF~YIal  582 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL--EEFFDFAQREIQLLQESD----EHPNVIRYYCSEQDRQFLYIAL  582 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHh--hHhHHHHHHHHHHHHhcc----CCCceEEEEeeccCCceEEEEe
Confidence            34457889999987 688965  67899999885  345577889999887654    8999999999999999999999


Q ss_pred             EeccCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec---CCCCCEEEEeCCCcee
Q psy11727        191 ELLSYNLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCH  265 (437)
Q Consensus       191 E~~~~~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~---~~~~~ikL~DFG~s~~  265 (437)
                      |+|..+|.+++...  ..........+....|++.||++||+  ++||||||||.||||+.   +....++|+|||+++.
T Consensus       583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs--l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS--LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh--cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            99999999999873  22112224557889999999999995  78999999999999975   3556799999999987


Q ss_pred             cCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        266 VGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       266 ~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ....      ..+..||-+|+|||++....-+.++||+||||++|+.++| ..||...-+.  -..|+.           
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~-----------  727 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILT-----------  727 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhc-----------
Confidence            6432      3346789999999999998888899999999999999995 8999764332  122221           


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                    +.+.+....           .+                       .+. ...|||.+||++||..|
T Consensus       728 --------------~~~~L~~L~-----------~~-----------------------~d~-eA~dLI~~ml~~dP~~R  758 (903)
T KOG1027|consen  728 --------------GNYTLVHLE-----------PL-----------------------PDC-EAKDLISRMLNPDPQLR  758 (903)
T ss_pred             --------------Cccceeeec-----------cC-----------------------chH-HHHHHHHHhcCCCcccC
Confidence                          111111000           00                       000 45899999999999999


Q ss_pred             CCHHHHhcCCCcC
Q psy11727        419 ISPTNVLRHEFFL  431 (437)
Q Consensus       419 ~t~~e~l~Hp~~~  431 (437)
                      |||.++|.||||=
T Consensus       759 Psa~~VL~HPlFW  771 (903)
T KOG1027|consen  759 PSATDVLNHPLFW  771 (903)
T ss_pred             CCHHHHhCCCccC
Confidence            9999999999994

>KOG1167|consensus

Probab=100.00  E-value=2.7e-35  Score=280.33  Aligned_cols=302  Identities=25%  Similarity=0.378  Sum_probs=210.2

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcC---CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.+.|.++++||.|.|++||++.+..   ..+.||+|.+. ......+...|+.++..+.    .+.||+++.+++..
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~-~ts~p~ri~~El~~L~~~g----G~~ni~~~~~~~rn  106 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIY-RTSSPSRILNELEMLYRLG----GSDNIIKLNGCFRN  106 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecc-cccCchHHHHHHHHHHHhc----cchhhhcchhhhcc
Confidence            3446679999999999999999998887   78899999986 3445678999999999986    55689999999999


Q ss_pred             CCEEEEEEEeccCc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~~-L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ++..++||||++.. -.++...     ++...++.+++.++.||+++|.  .|||||||||.|+|.. ...+.-.|+|||
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~--~GIvHRDiKpsNFL~n-~~t~rg~LvDFg  178 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHK--NGIVHRDIKPSNFLYN-RRTQRGVLVDFG  178 (418)
T ss_pred             CCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhc--cCccccCCCccccccc-cccCCceEEech
Confidence            99999999999874 4444433     6789999999999999999995  4899999999999995 355667899999


Q ss_pred             CceecC-----------------C------------------------------ccccccccccccChhhhcCC-CCCCc
Q psy11727        262 SSCHVG-----------------Q------------------------------TLYQYIQSRYYRSPEVLLGI-PYDLA  293 (437)
Q Consensus       262 ~s~~~~-----------------~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~  293 (437)
                      +|....                 .                              ......||++|+|||++... .-+++
T Consensus       179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta  258 (418)
T KOG1167|consen  179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA  258 (418)
T ss_pred             hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence            986210                 0                              01123689999999999865 46789


Q ss_pred             chHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCC
Q psy11727        294 IDMWSLGCILVELHTGEPLF-SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSK  372 (437)
Q Consensus       294 ~DvwSlG~il~elltg~~pf-~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (437)
                      +||||.|||+..+++++.|| ...++.+.+..|+..+|.-.-.-+.-......++.+   .      .........-.+.
T Consensus       259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k---s------n~~~~~e~~~~f~  329 (418)
T KOG1167|consen  259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQK---S------NIPTIPELRVNFE  329 (418)
T ss_pred             cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecc---c------cccccHHHHhchh
Confidence            99999999999999999886 555666777777766663221111111100001111   0      0000000000011


Q ss_pred             chhhhhccCCCCCCCCCCCCCCCChhhh-hHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        373 RLDTILGVDNGGPGGRRRNEPGHSLADY-MKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      ++. +..+.. ..  ...-....+.+.+ ..+.||+.+||+.||.+|+|+++||+||||...
T Consensus       330 s~~-~~~~~~-~~--q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  330 TLH-IESIYK-SR--QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             ccC-hhhccc-cc--ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence            110 000000 00  0000111122222 257899999999999999999999999999854

>KOG0196|consensus

Probab=100.00  E-value=1.6e-35  Score=298.73  Aligned_cols=246  Identities=21%  Similarity=0.330  Sum_probs=208.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC---eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .....|.++||.|.||.|++|+.+..|   ..||||.++....  ....+..|..||-.+     +||||++|.|+....
T Consensus       628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks  702 (996)
T KOG0196|consen  628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIRLEGVVTKS  702 (996)
T ss_pred             hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-----CCCcEEEEEEEEecC
Confidence            445778999999999999999987766   4699999985432  233455677776655     899999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      .-++||+|||.+ .|..+|+.+. +.|+.-+..-+.+.|+.|+.||.  ++++|||||...|||+  +.+..+|++|||+
T Consensus       703 ~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLs--dm~YVHRDLAARNILV--NsnLvCKVsDFGL  777 (996)
T KOG0196|consen  703 KPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLS--DMNYVHRDLAARNILV--NSNLVCKVSDFGL  777 (996)
T ss_pred             ceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHh--hcCchhhhhhhhheee--ccceEEEeccccc
Confidence            999999999965 6777887766 45999999999999999999999  6789999999999999  7899999999999


Q ss_pred             ceecCCcc---ccccc---cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQTL---YQYIQ---SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~~---~~~~g---t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |+...+..   ++..|   ...|.|||.|....++.++||||+|++|||.++ |+.||...++.+.+..|.+.+++||+.
T Consensus       778 SRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPm  857 (996)
T KOG0196|consen  778 SRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPM  857 (996)
T ss_pred             eeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCC
Confidence            98774433   22222   357999999999999999999999999999888 999999999999999999999998864


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      -++                                                              ..+.+|+..|++.|=
T Consensus       858 DCP--------------------------------------------------------------~aL~qLMldCWqkdR  875 (996)
T KOG0196|consen  858 DCP--------------------------------------------------------------AALYQLMLDCWQKDR  875 (996)
T ss_pred             CCc--------------------------------------------------------------HHHHHHHHHHHHHHh
Confidence            332                                                              157899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+||+..|++.
T Consensus       876 ~~RP~F~qiV~  886 (996)
T KOG0196|consen  876 NRRPKFAQIVS  886 (996)
T ss_pred             hcCCCHHHHHH
Confidence            99999999875

>KOG4278|consensus

Probab=100.00  E-value=2.1e-34  Score=283.70  Aligned_cols=209  Identities=23%  Similarity=0.356  Sum_probs=181.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      +..+..+||-|.||.||.|+++.-...||||.++...-...++..|..+++.+     .|||+|+|+++|...--+|||+
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-----kHpNLVqLLGVCT~EpPFYIiT  342 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTHEPPFYIIT  342 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-----cCccHHHHhhhhccCCCeEEEE
Confidence            35567889999999999999999999999999986655566777777777766     8999999999999999999999


Q ss_pred             Eec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||| .|+|+++|+..+...++.-....++.||..|+.||..+  .+|||||-..|.|+  .++..||++|||+++.+...
T Consensus       343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk--nFIHRDLAARNCLV--gEnhiVKvADFGLsRlMtgD  418 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHIVKVADFGLSRLMTGD  418 (1157)
T ss_pred             ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh--hhhhhhhhhhhccc--cccceEEeeccchhhhhcCC
Confidence            999 56999999998877788888899999999999999854  69999999999999  67888999999999887655


Q ss_pred             ccc-cccc---ccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        270 LYQ-YIQS---RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       270 ~~~-~~gt---~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      .++ ..|.   ..|.|||-+.-..++.++|||+|||+|||+.| |..||.|.+-...+..+.+.
T Consensus       419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg  482 (1157)
T KOG4278|consen  419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG  482 (1157)
T ss_pred             ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence            544 3443   45999999998899999999999999999999 89999998877666666543

>KOG4257|consensus

Probab=100.00  E-value=1.1e-34  Score=285.93  Aligned_cols=243  Identities=26%  Similarity=0.382  Sum_probs=191.1

Q ss_pred             eeeeceecccCceEEEEEEEcC----CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHE----EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~----~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+.++||.|-||.||+|....    ..-.||||..++..   .....|..+.+...+.+++|||||+++|.+.+ ...+
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W  466 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW  466 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence            4456789999999999997643    23358999987543   22235666666666777799999999999885 6789


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||||+++ |.|..++..+. ..++......++.||+.||+|||+.  .+|||||...|||+++  .--|||+|||+|+..
T Consensus       467 ivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk--rfVHRDIAaRNiLVsS--p~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK--RFVHRDIAARNILVSS--PQCVKLADFGLSRYL  541 (974)
T ss_pred             EEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh--chhhhhhhhhheeecC--cceeeecccchhhhc
Confidence            9999996 47888887765 5689999999999999999999986  5999999999999954  456999999999988


Q ss_pred             CCccccc--cc--cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTLYQY--IQ--SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~~~~--~g--t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....+..  .|  ..-|||||.+.-..++.++|||.|||++||++. |.-||.|..+.+.+-.|..+-..|-+..+    
T Consensus       542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nC----  617 (974)
T KOG4257|consen  542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNC----  617 (974)
T ss_pred             cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCC----
Confidence            7654422  22  245999999999999999999999999999888 99999998776665555443333221111    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                 |               ..+..|+.+||++||.+||+.
T Consensus       618 -------------------------------------------P---------------p~LYslmskcWayeP~kRPrf  639 (974)
T KOG4257|consen  618 -------------------------------------------P---------------PALYSLMSKCWAYEPSKRPRF  639 (974)
T ss_pred             -------------------------------------------C---------------hHHHHHHHHHhccCcccCCcH
Confidence                                                       1               146789999999999999998


Q ss_pred             HHHh
Q psy11727        422 TNVL  425 (437)
Q Consensus       422 ~e~l  425 (437)
                      .++.
T Consensus       640 tei~  643 (974)
T KOG4257|consen  640 TEIK  643 (974)
T ss_pred             HHHH
Confidence            8764

>KOG0199|consensus

Probab=100.00  E-value=1.3e-34  Score=288.64  Aligned_cols=249  Identities=22%  Similarity=0.342  Sum_probs=202.2

Q ss_pred             cCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ++..+.++||+|+||.|++|.+...   ...||||+++....  ..+.+.+|+.++..+     .|+|+++|||...+ .
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-----~H~hliRLyGvVl~-q  183 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-----QHPHLIRLYGVVLD-Q  183 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-----cCcceeEEeeeecc-c
Confidence            3456778999999999999988653   24689999985432  456788888888777     78999999999887 7


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      -..||||+++ |+|++.|.+.....|.......|+.||+.|+.||-++  ++|||||-..|+||  ...-.|||+|||+.
T Consensus       184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk--rlvHRDLAARNlll--asprtVKI~DFGLm  259 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK--RLVHRDLAARNLLL--ASPRTVKICDFGLM  259 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh--hhhhhhhhhhhhee--cccceeeeecccce
Confidence            7889999996 4899988875555688999999999999999999975  69999999999999  45667999999999


Q ss_pred             eecCCcccccc--c----cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        264 CHVGQTLYQYI--Q----SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       264 ~~~~~~~~~~~--g----t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +.++.....|+  +    ...|+|||.+....++.++|||++||++|||+| |+.||.|.....++++|-++..+|....
T Consensus       260 RaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~  339 (1039)
T KOG0199|consen  260 RALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKY  339 (1039)
T ss_pred             eccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCC
Confidence            88765433322  2    245999999999999999999999999999999 8899999999999888854332222111


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                 ..   +.+.+++..||..+|.
T Consensus       340 -----------------------------------------------------------cs---edIY~imk~cWah~pa  357 (1039)
T KOG0199|consen  340 -----------------------------------------------------------CS---EDIYQIMKNCWAHNPA  357 (1039)
T ss_pred             -----------------------------------------------------------Ch---HHHHHHHHHhccCCcc
Confidence                                                                       11   1467999999999999


Q ss_pred             CCCCHHHHhcCCCc
Q psy11727        417 KRISPTNVLRHEFF  430 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~  430 (437)
                      +|||...+...-++
T Consensus       358 DRptFsair~~~~l  371 (1039)
T KOG0199|consen  358 DRPTFSAIREDLVL  371 (1039)
T ss_pred             ccccHHHHHHhHHH
Confidence            99999887654443

>KOG1094|consensus

Probab=100.00  E-value=2e-33  Score=275.65  Aligned_cols=209  Identities=24%  Similarity=0.357  Sum_probs=172.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++..+.++||+|-||.|.+|.- ..+..||+|+++.....  .+.+..|+++|.++     .|||||.++++|..++.+|
T Consensus       538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-----khPNIveLvGVC~~DePic  611 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRL-----KHPNIVELLGVCVQDDPLC  611 (807)
T ss_pred             hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhcc-----CCCCeeEEEeeeecCCchH
Confidence            3566789999999999999975 34689999999854322  35677899998887     7899999999999999999


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +|+||+. |+|.+++..+....+......+|+.||+.|++||.+  +.+|||||.+.|+|+  ++++++||+|||+|+.+
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes--~nfVHrd~a~rNcLv--~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES--LNFVHRDLATRNCLV--DGEFTIKIADFGMSRNL  687 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh--hchhhccccccceee--cCcccEEecCccccccc
Confidence            9999995 589999988754445566677899999999999995  579999999999999  89999999999999855


Q ss_pred             CCcc-ccccc----cccccChhhhcCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHH
Q psy11727        267 GQTL-YQYIQ----SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       267 ~~~~-~~~~g----t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~  328 (437)
                      -... +...|    ...|||||.+.-+++++++|+|+||+++||+++  .+.||.....+...+..-..
T Consensus       688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~  756 (807)
T KOG1094|consen  688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEF  756 (807)
T ss_pred             ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhh
Confidence            3322 22222    467999999999999999999999999999766  78999988777666655443

>KOG0984|consensus

Probab=100.00  E-value=2.3e-33  Score=243.68  Aligned_cols=212  Identities=24%  Similarity=0.370  Sum_probs=172.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.......||+|++|.|-+.+...+|...|+|.++..-.  ..++..+|+.+.    .....+|++|.++|........
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~----~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDII----MRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhh----ccCCCCCeEEEeehhhhccccE
Confidence            3445567789999999999999999999999999974322  122222333332    2345889999999999999999


Q ss_pred             EEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        187 CLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|.||.|..+|..+.+.  .....+++..+-+|+..+..||.|||++ +.+||||+||.|||+  +..|.+|+||||.|-
T Consensus       121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLI--n~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILI--NYDGQVKICDFGISG  197 (282)
T ss_pred             EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEE--ccCCcEEEcccccce
Confidence            99999998877665433  1235689999999999999999999995 889999999999999  889999999999998


Q ss_pred             ecCCcccc--ccccccccChhhhcC----CCCCCcchHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHH
Q psy11727        265 HVGQTLYQ--YIQSRYYRSPEVLLG----IPYDLAIDMWSLGCILVELHTGEPLFS-GKNEVDQMTKIIE  327 (437)
Q Consensus       265 ~~~~~~~~--~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltg~~pf~-~~~~~~~~~~i~~  327 (437)
                      .+.++...  ..|...|||||.+..    ..|+.++||||||+++.||.+++.||. +.++.+++.++++
T Consensus       198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  198 YLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             eehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            77555432  467788999999864    379999999999999999999999995 5778888888876

>KOG1152|consensus

Probab=100.00  E-value=2.7e-33  Score=274.48  Aligned_cols=198  Identities=27%  Similarity=0.425  Sum_probs=174.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .+|...+.+|.|+||+|++|.++.+...|+||.|.+.+.         .......|++||..++.+  .|+||++++++|
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--sH~NIlKlLdfF  638 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--SHENILKLLDFF  638 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--Cccchhhhhhee
Confidence            459999999999999999999999999999999976542         233455799999999865  689999999999


Q ss_pred             eECCEEEEEEEecc-C-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        181 TWKNHLCLVFELLS-Y-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       181 ~~~~~~~lV~E~~~-~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      ++++++||+||--+ | +|+++|....  .+++..++-|++|++.|+++||++  ||||||||-+||.+  +.+|-+||+
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~--~ivhrdikdenviv--d~~g~~kli  712 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQ--GIVHRDIKDENVIV--DSNGFVKLI  712 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhcccccccc--CceecccccccEEE--ecCCeEEEe
Confidence            99999999999984 4 7999998764  499999999999999999999965  89999999999999  889999999


Q ss_pred             eCCCceecC-CccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        259 DFGSSCHVG-QTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       259 DFG~s~~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      |||+|.... .+...++||..|.|||++.|.+|- ..-|||+||++||.++..+.||..
T Consensus       713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             eccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            999997663 344568999999999999998875 679999999999999999888863

>KOG3653|consensus

Probab=99.98  E-value=3.1e-32  Score=262.15  Aligned_cols=192  Identities=26%  Similarity=0.335  Sum_probs=158.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----E
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----H  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----~  185 (437)
                      ....+.++||+|.||.||+|..  +++.||||++..  .....+..|..|.+...   ..|+||+++++.-....    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~---m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE--QEKQSFQNEKNIYSLPG---MKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCH--HHHHHHHhHHHHHhccC---ccchhHHHhhchhccCCccccc
Confidence            3466788999999999999965  568999999963  33467788888887664   48999999999876555    8


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC-------CCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP-------ELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~-------~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      ++||++|.+ |+|.++|+.+.   ++|....+++.-|++||+|||+.       +.+|+|||||..||||  ..++...|
T Consensus       283 ywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv--K~DlTccI  357 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV--KNDLTCCI  357 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE--ccCCcEEe
Confidence            999999995 69999999864   89999999999999999999973       3569999999999999  56888999


Q ss_pred             EeCCCceecCCc-----cccccccccccChhhhcCCC-CC-----CcchHHHHHHHHHHHHhCCCCC
Q psy11727        258 IDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIP-YD-----LAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       258 ~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwSlG~il~elltg~~pf  313 (437)
                      +|||+|..+...     ....+||..|||||++.+.- +.     ...||||+|.+||||++.-.-+
T Consensus       358 aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~  424 (534)
T KOG3653|consen  358 ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA  424 (534)
T ss_pred             eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            999999766321     22368999999999998742 22     4699999999999999975444

>KOG0200|consensus

Probab=99.97  E-value=1.4e-30  Score=273.88  Aligned_cols=246  Identities=26%  Similarity=0.403  Sum_probs=191.4

Q ss_pred             CeeeeceecccCceEEEEEEEc----C---CCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDH----E---EKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~----~---~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      +..+.+.||.|+||+|++|.-.    .   ....||||.++.....  ...+..|+.++..+.    .|+||+.+.+++.
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g----~H~niv~llG~~t  372 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG----KHPNIVNLLGACT  372 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc----CCcchhhheeeec
Confidence            3456679999999999999632    1   2567999998744322  355667888888775    7999999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcC------C--------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTN------F--------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~------~--------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      .++.+++|+||+. |+|.++++...      .        ..++......++.||+.|++||++.  ++|||||-..|||
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~--~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV--PCVHRDLAARNVL  450 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC--CccchhhhhhhEE
Confidence            9999999999995 68999987654      1        1288999999999999999999964  6999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCC-cccccccc-----ccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCC-H
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQ-TLYQYIQS-----RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN-E  318 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~-~~~~~~gt-----~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~-~  318 (437)
                      +  .++..+||+|||+|+.... ..+...++     ..|||||.+....|+.++||||+|++|||++| |..||.+.. .
T Consensus       451 i--~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~  528 (609)
T KOG0200|consen  451 I--TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT  528 (609)
T ss_pred             e--cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence            9  5677899999999986533 22222222     34999999999999999999999999999999 889999854 4


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+.++.+.++.                                                           +...|.+-. 
T Consensus       529 ~~l~~~l~~G~-----------------------------------------------------------r~~~P~~c~-  548 (609)
T KOG0200|consen  529 EELLEFLKEGN-----------------------------------------------------------RMEQPEHCS-  548 (609)
T ss_pred             HHHHHHHhcCC-----------------------------------------------------------CCCCCCCCC-
Confidence            44444443322                                                           222222221 


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                        .++.++++.|++.+|++|||..++.+
T Consensus       549 --~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  549 --DEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             --HHHHHHHHHHhCCCcccCCCHHHHHH
Confidence              14569999999999999999888753

>KOG0576|consensus

Probab=99.97  E-value=2.9e-32  Score=271.23  Aligned_cols=256  Identities=26%  Similarity=0.381  Sum_probs=205.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++...+|.|+||.||+++++.+++..|+|+++.... ...-.+.|+.+++..     +|+|||.+++.+...+.++
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc-----~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-----RHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC-----CCcChHHHHhhhhhhcCcE
Confidence            4689999999999999999999999999999999985432 223344565555444     8999999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +.||||+| +|.+...-+  ..+++.++...++..+++|+|||+  .|=+|||||-.|||+  .+.|.+|++|||.+-.+
T Consensus        89 icMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs--~gk~hRdiKGanill--td~gDvklaDfgvsaqi  162 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHS--QGKIHRDIKGANILL--TDEGDVKLADFGVSAQI  162 (829)
T ss_pred             EEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhc--CCcccccccccceee--cccCceeecccCchhhh
Confidence            99999976 666654443  469999999999999999999995  478999999999999  67889999999998776


Q ss_pred             CCcc---ccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      +...   ..++||+.|||||+..   .+.|...+|+|++|+...|+-.-++|--.......+..+.+-...||..     
T Consensus       163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l-----  237 (829)
T KOG0576|consen  163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL-----  237 (829)
T ss_pred             hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc-----
Confidence            5433   4689999999999874   4579999999999999999999888866655554444443333333310     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                        .++..|   +..|.+|++.+|..+|++|||
T Consensus       238 --------------------------------------------------kDk~kw---s~~fh~fvK~altknpKkRpt  264 (829)
T KOG0576|consen  238 --------------------------------------------------KDKTKW---SEFFHNFVKGALTKNPKKRPT  264 (829)
T ss_pred             --------------------------------------------------cCCccc---hHHHHHHHHHHhcCCCccCCC
Confidence                                                              001111   125899999999999999999


Q ss_pred             HHHHhcCCCcCcC
Q psy11727        421 PTNVLRHEFFLKH  433 (437)
Q Consensus       421 ~~e~l~Hp~~~~~  433 (437)
                      ++.+|+|||.+++
T Consensus       265 aeklL~h~fvs~~  277 (829)
T KOG0576|consen  265 AEKLLQHPFVSQT  277 (829)
T ss_pred             hhhheeceeeccc
Confidence            9999999999875

>KOG2052|consensus

Probab=99.97  E-value=3.3e-30  Score=246.55  Aligned_cols=190  Identities=24%  Similarity=0.316  Sum_probs=155.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC---
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN---  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~---  184 (437)
                      +.....+.+.||+|.||+||+|.+.  |+.||||++.....  ....+|.+|.+....   +|+||+.+++.=..++   
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~SWfrEtEIYqTvmL---RHENILgFIaaD~~~~gs~  281 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--RSWFRETEIYQTVML---RHENILGFIAADNKDNGSW  281 (513)
T ss_pred             hhheeEEEEEecCccccceeecccc--CCceEEEEecccch--hhhhhHHHHHHHHHh---ccchhhhhhhccccCCCce
Confidence            3556889999999999999999875  66899999975443  556667777776543   8999999988755433   


Q ss_pred             -EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        185 -HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       185 -~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                       .++||++|.+ |+|+|+|...   .++.....+++.-++.||++||..      +..|.|||||+.|||+  .+++.+-
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV--Kkn~~C~  356 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTCC  356 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE--ccCCcEE
Confidence             7999999995 6999999885   489999999999999999999974      3459999999999999  7799999


Q ss_pred             EEeCCCceecCCc-------cccccccccccChhhhcCCC------CCCcchHHHHHHHHHHHHhC
Q psy11727        257 IIDFGSSCHVGQT-------LYQYIQSRYYRSPEVLLGIP------YDLAIDMWSLGCILVELHTG  309 (437)
Q Consensus       257 L~DFG~s~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltg  309 (437)
                      |+|+|+|......       ....+||..|||||++...-      --..+||||||+++||+...
T Consensus       357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR  422 (513)
T KOG2052|consen  357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR  422 (513)
T ss_pred             EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999766433       33468999999999997532      11458999999999998753

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=6e-31  Score=286.55  Aligned_cols=195  Identities=22%  Similarity=0.272  Sum_probs=145.8

Q ss_pred             cEEEeccee-------eECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        172 YIVKLKGHF-------TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       172 ~iv~l~~~~-------~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      ||++++++|       ...+.++++||+++++|.+++.... ..+++..++.+++||+.||+|||+  .|||||||||+|
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~--~gIvHrDlKP~N  110 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHS--QGIVVHNVRPSC  110 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHh--CCeeeccCCchh
Confidence            566667766       3345788899999999999997543 459999999999999999999995  489999999999


Q ss_pred             EEEec-----------------CCCCCEEEEeCCCceecCC-------------------ccccccccccccChhhhcCC
Q psy11727        245 ILLCS-----------------PKRSAIKIIDFGSSCHVGQ-------------------TLYQYIQSRYYRSPEVLLGI  288 (437)
Q Consensus       245 Ill~~-----------------~~~~~ikL~DFG~s~~~~~-------------------~~~~~~gt~~y~aPE~~~~~  288 (437)
                      |||+.                 +.++.+||+|||++.....                   .....+||+.|+|||++.+.
T Consensus       111 iLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~  190 (793)
T PLN00181        111 FVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGS  190 (793)
T ss_pred             EEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccC
Confidence            99942                 2345677888887754211                   00124578889999999999


Q ss_pred             CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccC
Q psy11727        289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERL  368 (437)
Q Consensus       289 ~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (437)
                      .|+.++|||||||+||||++|.+|+....  ..+..+... ..|+.. ..                              
T Consensus       191 ~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~-~~~~~~-~~------------------------------  236 (793)
T PLN00181        191 SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHR-VLPPQI-LL------------------------------  236 (793)
T ss_pred             CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHh-hcChhh-hh------------------------------
Confidence            99999999999999999999999876422  122222111 111110 00                              


Q ss_pred             CCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        369 PGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                                                    ......+++.+||..||.+|||+.|+|+||||++.
T Consensus       237 ------------------------------~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        237 ------------------------------NWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             ------------------------------cCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence                                          00134689999999999999999999999999763

>KOG1345|consensus

Probab=99.97  E-value=2.3e-31  Score=239.93  Aligned_cols=201  Identities=25%  Similarity=0.369  Sum_probs=168.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecce-eeECCE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH-FTWKNH  185 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~-~~~~~~  185 (437)
                      .+.+.|.|.+.||+|.||.+-+|..+.++..+++|.+.........+.+|...--.+.    .|.||+.-++. |+..+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls----~H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS----PHQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec----cchhhhHHHHHHhhcCce
Confidence            3567899999999999999999999999999999999866666677777766554443    56788887665 888999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++++||++. +|..-+..   .++.+...++++.|++.|+.|||++  .+||||||.+||||-..+.-.|||||||.+.
T Consensus        97 YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk--nlVHRdlK~eNiLif~~df~rvKlcDFG~t~  171 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK--NLVHRDLKAENILIFDADFYRVKLCDFGLTR  171 (378)
T ss_pred             EEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc--chhhcccccceEEEecCCccEEEeeeccccc
Confidence            9999999975 66655444   4689999999999999999999987  5999999999999987677789999999998


Q ss_pred             ecCCccccccccccccChhhhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      ..+.......-+..|.+||+....     ...+.+|+|.||+|+|.++||.+||...
T Consensus       172 k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  172 KVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             ccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence            887766555567789999988643     2467899999999999999999999743

>KOG1025|consensus

Probab=99.97  E-value=2.2e-30  Score=262.54  Aligned_cols=205  Identities=23%  Similarity=0.320  Sum_probs=164.8

Q ss_pred             eeeceecccCceEEEEEEEcCCCe----EEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        113 EIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ...++||+|+||+||+|.+-..|+    +||||++......  ..++..     +.+.+..++|+|+++|++++.... +
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~Ld-----eAl~masldHpnl~RLLgvc~~s~-~  772 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLD-----EALRMASLDHPNLLRLLGVCMLST-L  772 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHH-----HHHHHhcCCCchHHHHhhhcccch-H
Confidence            346789999999999998876665    5888988643321  223333     344555669999999999999765 8


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      .||++|+++ .|.++++..+ ..+.......|..||++|+.|||.+  .+|||||-..|||+  .+-.++||+|||++..
T Consensus       773 qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q--rlVHrdLaaRNVLV--ksP~hvkitdfgla~l  847 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ--RLVHRDLAARNVLV--KSPNHVKITDFGLAKL  847 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc--chhhhhhhhhheee--cCCCeEEEEecchhhc
Confidence            999999965 8999998865 5688999999999999999999965  69999999999999  4566799999999987


Q ss_pred             cCCccccc---cc--cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q psy11727        266 VGQTLYQY---IQ--SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       266 ~~~~~~~~---~g--t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~  328 (437)
                      .......+   .|  ...|||-|.+....|+.++|||||||++||++| |.-|+.+....++-..+...
T Consensus       848 l~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g  916 (1177)
T KOG1025|consen  848 LAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG  916 (1177)
T ss_pred             cCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc
Confidence            64432222   22  345999999999999999999999999999999 99999999887776655443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=8.4e-29  Score=224.12  Aligned_cols=179  Identities=41%  Similarity=0.579  Sum_probs=154.0

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEecc-
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-  194 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~-  194 (437)
                      ||+|++|+||++....+++.+++|++......  ...+..|+..++.+     .|++++++++++......+++||+++ 
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-----NHPNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCCCeeeEeeeeecCCeEEEEEecCCC
Confidence            68999999999999888999999999754431  35677788888877     45899999999999999999999998 


Q ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCCCceecCCc---c
Q psy11727        195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGSSCHVGQT---L  270 (437)
Q Consensus       195 ~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG~s~~~~~~---~  270 (437)
                      ++|.+++.... ..++...+..++.+++.+|.+||+.  |++|+||+|.||++  +. .+.++|+|||.+......   .
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~--~~~H~dl~~~ni~~--~~~~~~~~l~d~~~~~~~~~~~~~~  150 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN--GIIHRDLKPENILL--DSDNGKVKLADFGLSKLLTSDKSLL  150 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCCHhhEEE--eCCCCcEEEecCCceEEccCCcchh
Confidence            58898887653 3589999999999999999999964  89999999999999  44 678999999999877554   3


Q ss_pred             ccccccccccChhhhcCC-CCCCcchHHHHHHHHHHH
Q psy11727        271 YQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVEL  306 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el  306 (437)
                      ....+...|++||.+... .++.+.|+||||++++++
T Consensus       151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            445678889999999887 788999999999999999

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=5.5e-29  Score=229.18  Aligned_cols=207  Identities=35%  Similarity=0.486  Sum_probs=172.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      |.+.+.||.|++|+||++....+++.+|+|.+.....  ....+..|+..+..+     .|++++++++++...+..+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-----KHPNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCChhhheeeeecCCceEEE
Confidence            5678899999999999999998899999999975433  245566677777666     678999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      +|++++ +|.+++..... .+++..+..++.+++.++.+||.+  |++|+||+|.||++  +.++.++|+|||.+.....
T Consensus        76 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~--~i~h~di~~~ni~v--~~~~~~~l~d~g~~~~~~~  150 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL--GIVHRDLKPENILL--GMDGLVKLADFGLARFIHR  150 (225)
T ss_pred             EeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--cCCCCEEEeeCceeeEecC
Confidence            999977 89998876542 278999999999999999999964  89999999999999  5668899999999987755


Q ss_pred             cc----ccccccccccChhhh-cCCCCCCcchHHHHHHHHHHHHhCCCCCCC-CC-HHHHHHHHHHH
Q psy11727        269 TL----YQYIQSRYYRSPEVL-LGIPYDLAIDMWSLGCILVELHTGEPLFSG-KN-EVDQMTKIIEV  328 (437)
Q Consensus       269 ~~----~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltg~~pf~~-~~-~~~~~~~i~~~  328 (437)
                      ..    ....++..|++||.+ ....++.++|+||||+++++|++|++||.. .+ ...+.+.|...
T Consensus       151 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      151 DLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             cccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence            43    456778889999999 666788899999999999999999999977 33 33555555443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1024|consensus

Probab=99.95  E-value=1.8e-28  Score=231.03  Aligned_cols=254  Identities=20%  Similarity=0.250  Sum_probs=200.9

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCC-----eEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK-----CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~-----~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      +......|+++..++-+|.||.||.|.+.+++     +.|.+|.+++..   .+.+....+.+.+...++.|||+..+.+
T Consensus       278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            33444567888999999999999999776543     346667665432   4555556666667777889999999999


Q ss_pred             eeeE-CCEEEEEEEecc-CcHHHHHH-----h-cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        179 HFTW-KNHLCLVFELLS-YNLYNLIR-----N-TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       179 ~~~~-~~~~~lV~E~~~-~~L~~~l~-----~-~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      .+.. .+..+.++.+++ |+|..++.     . ...+.++..+...++.|++.|++|||.+  ||||.||...|.+|  |
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~--~ViHkDiAaRNCvI--d  430 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH--GVIHKDIAARNCVI--D  430 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc--Ccccchhhhhccee--h
Confidence            8765 457788888885 58988886     2 2334578888899999999999999965  79999999999999  7


Q ss_pred             CCCCEEEEeCCCceecCCccccccc-----cccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy11727        251 KRSAIKIIDFGSSCHVGQTLYQYIQ-----SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTK  324 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~  324 (437)
                      +...+||+|=.+|+..-...+...|     ...|||||.+.+..|+.++|+|||||+||||+| |+.|+..-++.++..-
T Consensus       431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y  510 (563)
T KOG1024|consen  431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY  510 (563)
T ss_pred             hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence            8899999999999877554454444     346999999999999999999999999999999 9999999999998887


Q ss_pred             HHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      +.++.....+..+                                               |               .++.
T Consensus       511 lkdGyRlaQP~NC-----------------------------------------------P---------------DeLf  528 (563)
T KOG1024|consen  511 LKDGYRLAQPFNC-----------------------------------------------P---------------DELF  528 (563)
T ss_pred             HhccceecCCCCC-----------------------------------------------c---------------HHHH
Confidence            7664332211110                                               1               1578


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy11727        405 DLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      ..+.-||..+|++|||.+|+..
T Consensus       529 ~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  529 TVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHHhcCcccCCCHHHHHH
Confidence            8999999999999999999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=7.3e-28  Score=214.46  Aligned_cols=169  Identities=21%  Similarity=0.231  Sum_probs=127.0

Q ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccccc
Q psy11727        195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI  274 (437)
Q Consensus       195 ~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~  274 (437)
                      |+|.+++.... ..+++..++.++.||+.||.|||++  +      ||+|||+  +.++.+|+  ||++.......  ..
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~--~------kp~Nil~--~~~~~~~~--fG~~~~~~~~~--~~   65 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQ--A------KSGNILL--TWDGLLKL--DGSVAFKTPEQ--SR   65 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhc--C------CcccEeE--cCccceee--ccceEeecccc--CC
Confidence            57888887643 4699999999999999999999965  4      9999999  67888898  99987665432  36


Q ss_pred             ccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhhccCCccchhhcccCCC
Q psy11727        275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDN  353 (437)
Q Consensus       275 gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~  353 (437)
                      ||+.|+|||++.+..++.++|||||||++|||++|++||...... ..+..+........       ..           
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~-----------  127 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD-------PR-----------  127 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC-------cc-----------
Confidence            899999999999999999999999999999999999999765432 22222222110000       00           


Q ss_pred             cceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        354 SYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                                                       .+   ...........+.+||.+||..||.+|||+.|+++|+|+..
T Consensus       128 ---------------------------------~~---~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      128 ---------------------------------DR---SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             ---------------------------------cc---ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence                                             00   00000001125799999999999999999999999999753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1163|consensus

Probab=99.94  E-value=1.6e-26  Score=205.51  Aligned_cols=226  Identities=23%  Similarity=0.302  Sum_probs=186.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|.+++.||.|+||.+|.|.....|+.||||+-. +.....+...|..+.+.++.    ...|..+..++.+.++-.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es-~~a~hpqL~yEskvY~iL~~----g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES-SKAKHPQLLYESKVYRILQG----GVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeec-ccCCCcchhHHHHHHHHhcc----CCCCchhhhhccccccce
Confidence            4678999999999999999999999999999999876 34455677889999999874    345777777888889999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCCCceec
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG~s~~~  266 (437)
                      +||++++.+|.+++.-.. ..++...+..++-|++.-++|+|.+  ++|||||||+|+|.+-+. ...+.|+|||+|+..
T Consensus        88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r--~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR--NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh--ccccccCCccceeeccccccceEEEEeccchhhh
Confidence            999999999999887654 4589999999999999999999965  799999999999995433 235899999999765


Q ss_pred             CCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHH-hCCC
Q psy11727        267 GQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ---MTKIIEV-LGMP  332 (437)
Q Consensus       267 ~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~---~~~i~~~-~~~p  332 (437)
                      .+.          .....||..|.+-....+..-+...|+-|+|.+|.++.-|..||.|-.....   +++|.+. ...|
T Consensus       165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~  244 (341)
T KOG1163|consen  165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP  244 (341)
T ss_pred             ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence            332          2245789999999999998999999999999999999999999998765544   4455554 5667


Q ss_pred             ChhhhccCC
Q psy11727        333 PGYLLHGAS  341 (437)
Q Consensus       333 ~~~~~~~~~  341 (437)
                      ++.++...+
T Consensus       245 ie~LC~G~P  253 (341)
T KOG1163|consen  245 IEVLCKGFP  253 (341)
T ss_pred             HHHHhCCCc
Confidence            777666555

>KOG1164|consensus

Probab=99.94  E-value=1.4e-25  Score=219.50  Aligned_cols=205  Identities=28%  Similarity=0.301  Sum_probs=170.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCC-eEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEeccee-eECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF-TWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~-~~~~~~~  187 (437)
                      +|.+.+.||+|+||+||+|.+..++ ..+|+|+...... .......|..++..+.. .....++..+++.. ....+-+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            8999999999999999999988774 6799998764322 22378889999999875 22234688888888 5778999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-C--CCEEEEeCCCce
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-R--SAIKIIDFGSSC  264 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~--~~ikL~DFG~s~  264 (437)
                      +||++++.+|.++......+.++...+..++.|++.+|.+||+  .|++||||||+|++++... .  ..+.|.|||+++
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~--~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS--KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh--cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9999999999998876666779999999999999999999994  5999999999999996433 1  469999999998


Q ss_pred             --ecC-C---------c-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        265 --HVG-Q---------T-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       265 --~~~-~---------~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                        ... .         . .....||..|+++.+..+.+.+.+.|+||++.++.+++.|..||.+...
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence              321 0         1 1235599999999999999999999999999999999999999977654

>KOG0590|consensus

Probab=99.93  E-value=4e-27  Score=245.23  Aligned_cols=267  Identities=24%  Similarity=0.319  Sum_probs=192.8

Q ss_pred             eccCe-eeeceecccCceEEEEEEEcCCCeEEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        108 FLDRY-EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       108 ~~~~y-~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +.+.| ....++|.|++|.|+.+......+.++.|..+..  .....+........+.+....+.|+|++.....+.+..
T Consensus       315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~  394 (601)
T KOG0590|consen  315 FSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID  394 (601)
T ss_pred             cccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence            34556 3567899999998888887777776777655421  11111111222333445566779999988888877766


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ...-+||||+++|+.++....  .++...+..++.|++.|+.|||+  +||.||||||+|+++  ..+|.+||+|||.+.
T Consensus       395 ~~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~--~GiahrdlK~enll~--~~~g~lki~Dfg~~~  468 (601)
T KOG0590|consen  395 GILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHS--MGLAHRDLKLENLLV--TENGILKIIDFGAAS  468 (601)
T ss_pred             cchhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHh--cCceeccCccccEEE--ecCCceEEeecCcce
Confidence            665569999889998888763  37889999999999999999995  599999999999999  678899999999986


Q ss_pred             ecCC-------ccccccccccccChhhhcCCCCCC-cchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        265 HVGQ-------TLYQYIQSRYYRSPEVLLGIPYDL-AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       265 ~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ....       .....+|+..|+|||++.+..|++ ..||||.|++++.|.+|+.||......+...             
T Consensus       469 vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------------  535 (601)
T KOG0590|consen  469 VFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------------  535 (601)
T ss_pred             eeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------------
Confidence            5522       234578999999999999999986 6999999999999999999997544332211             


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                               +.+...          ..++....-.+.+.                      ......+.+|.+||++||.
T Consensus       536 ---------~~~~~~----------~~~~~~~~~~~~~~----------------------~lp~~~~~~~~~~l~~~P~  574 (601)
T KOG0590|consen  536 ---------KTNNYS----------DQRNIFEGPNRLLS----------------------LLPRETRIIIYRMLQLDPT  574 (601)
T ss_pred             ---------hhhccc----------cccccccChHHHHH----------------------hchhhHHHHHHHHccCChh
Confidence                     000000          00000000001111                      1112568999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCC
Q psy11727        417 KRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~  434 (437)
                      +|+|+++|++.+||+.+.
T Consensus       575 ~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  575 KRITIEQILNDEWIRSIE  592 (601)
T ss_pred             heecHHHHhhChHhhhcc
Confidence            999999999999999865

>KOG1165|consensus

Probab=99.93  E-value=1.8e-25  Score=207.10  Aligned_cols=225  Identities=23%  Similarity=0.261  Sum_probs=184.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .-.|.+.++||+|+||..+.|.+.-+++.||||.-. .+....+...|-...+.|.    ..+.|..++.+-+...+-.|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~----g~~GIP~vYYFGqeG~~NiL  101 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLG----GTEGIPQVYYFGQEGKYNIL  101 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHc----CCCCCCceeeeccccchhhh
Confidence            347999999999999999999999999999999865 3334567778888888886    44678888888888889999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC---CCCEEEEeCCCcee
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK---RSAIKIIDFGSSCH  265 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~---~~~ikL~DFG~s~~  265 (437)
                      |+|+++.+|.|++.-.. ..||...+..++.||+.-++|+|++  .+|.|||||+|+||+...   ...|.|+|||+|+.
T Consensus       102 VidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k--~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  102 VIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK--DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc--ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            99999999999887765 4699999999999999999999987  599999999999996433   24589999999987


Q ss_pred             cCCcc----------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHH-hCC
Q psy11727        266 VGQTL----------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE---VDQMTKIIEV-LGM  331 (437)
Q Consensus       266 ~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~-~~~  331 (437)
                      ..++.          .+..||..||+-....|.+-+...|+-|||-++++.|-|..||.|-..   -+.+++|-+. ...
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T  258 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST  258 (449)
T ss_pred             hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence            75432          245789999999999999999999999999999999999999988543   3445555544 334


Q ss_pred             CChhhhccCC
Q psy11727        332 PPGYLLHGAS  341 (437)
Q Consensus       332 p~~~~~~~~~  341 (437)
                      |...++...+
T Consensus       259 ~i~~Lc~g~P  268 (449)
T KOG1165|consen  259 PIEVLCEGFP  268 (449)
T ss_pred             CHHHHHhcCH
Confidence            5555555443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.92  E-value=2.2e-23  Score=200.53  Aligned_cols=256  Identities=36%  Similarity=0.484  Sum_probs=194.1

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCC-cEEEecceeeECCEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSR-YIVKLKGHFTWKNHL  186 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~-~iv~l~~~~~~~~~~  186 (437)
                      |.+.+.||.|+||.||++.+.   ..+++|.+.....    ....+.+|..++..+.     |+ +++++.+.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLN-----HPPNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHcc-----CCcceeeEEEEEecCCEE
Confidence            788899999999999999887   6899999875432    2445667777777664     44 799999999888889


Q ss_pred             EEEEEeccC-cHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCCCc
Q psy11727        187 CLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFGSS  263 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG~s  263 (437)
                      +++++++.+ .+.+++..... ..++......++.|++.++.|+|.  .|++|||+||+||++  +..+ .++++|||.+
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~--~~~~hrd~kp~nil~--~~~~~~~~l~dfg~~  149 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS--KGIIHRDIKPENILL--DRDGRVVKLIDFGLA  149 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeee--cCCCCeEEEeccCcc
Confidence            999999976 67655555421 258999999999999999999995  479999999999999  5565 6999999998


Q ss_pred             eecCCc---------cccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHH
Q psy11727        264 CHVGQT---------LYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNE---VDQMTKIIEV  328 (437)
Q Consensus       264 ~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~  328 (437)
                      ......         .....||..|+|||.+.+   ..++...|+||+|++++++++|..||.....   ..........
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  229 (384)
T COG0515         150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE  229 (384)
T ss_pred             eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh
Confidence            755332         356788999999999988   5788999999999999999999999887764   2333333332


Q ss_pred             hCCC-ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q psy11727        329 LGMP-PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI  407 (437)
Q Consensus       329 ~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  407 (437)
                      ...+ ......                              +..                     .   ......+.+++
T Consensus       230 ~~~~~~~~~~~------------------------------~~~---------------------~---~~~~~~~~~~~  255 (384)
T COG0515         230 LPTPSLASPLS------------------------------PSN---------------------P---ELISKAASDLL  255 (384)
T ss_pred             cCCcccccccC------------------------------ccc---------------------c---chhhHHHHHHH
Confidence            2211 000000                              000                     0   11112568999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        408 LRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       408 ~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+++..+|..|.+..+...++|....
T Consensus       256 ~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         256 KKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             HHHHhcCchhcCCHHHHhhchHhhCc
Confidence            99999999999999999988776553

>KOG0603|consensus

Probab=99.92  E-value=3.7e-26  Score=228.22  Aligned_cols=239  Identities=28%  Similarity=0.422  Sum_probs=191.3

Q ss_pred             eecccCceEEEEEEE---cCCCeEEEEEEecCCcccch---HHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        117 LLGKGSFGQVVKAFD---HEEKCQVAIKIIKNKKPFLN---QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~~~~~---~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      ++|+|+||.|+++..   ...+..+|+|+.++......   ....|..+++..+    .|+.+|++...|+.+..+++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~----~~~f~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH----NTPFLVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc----CCCceeeeeeeeccccchhHhh
Confidence            379999999998743   34677899998875432211   2333555655553    4789999999999999999999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ++..| .|...+....  .+.+...+.+...++-+++.+|  ++||+|||+|++||++  +.+|+|++.|||+++..-..
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh--~l~iiyrd~k~enill--d~~Ghi~~tdfglske~v~~  150 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLH--KLGIAYRDYKLENVLL--LLEGHIKLTDFGLSKEAVKE  150 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcc--hhHHHHhcccccceee--cccCccccCCchhhhHhHhh
Confidence            99955 6776665543  4788888999999999999999  6799999999999999  88999999999999876443


Q ss_pred             cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChhhhccCCccchhhc
Q psy11727        270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGYLLHGASKTSKYFD  348 (437)
Q Consensus       270 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~p~~~~~~~~~~~~~~~~  348 (437)
                      ... |||..|||||++.  +.+.+.|+||||++++||+||..||.+    +.+.+|... +++|. .++.          
T Consensus       151 ~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~-~l~~----------  212 (612)
T KOG0603|consen  151 KIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR-ELSA----------  212 (612)
T ss_pred             hhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch-hhhH----------
Confidence            333 9999999999998  568999999999999999999999998    666777663 33332 2221          


Q ss_pred             ccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-----HHH
Q psy11727        349 RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-----PTN  423 (437)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-----~~e  423 (437)
                                                                           ...+++..|+..+|..|.-     +.|
T Consensus       213 -----------------------------------------------------~a~~~~~~l~~r~p~nrLg~~~~~~~e  239 (612)
T KOG0603|consen  213 -----------------------------------------------------EARSLFRQLFKRNPENRLGAGPDGVDE  239 (612)
T ss_pred             -----------------------------------------------------HHHHHHHHHHhhCHHHHhccCcchhHH
Confidence                                                                 4589999999999999986     478


Q ss_pred             HhcCCCcCcCCCC
Q psy11727        424 VLRHEFFLKHSVD  436 (437)
Q Consensus       424 ~l~Hp~~~~~~~~  436 (437)
                      +.+|+||+.+.++
T Consensus       240 ik~h~f~~~i~~~  252 (612)
T KOG0603|consen  240 IKQHEFFQSIDWN  252 (612)
T ss_pred             HhccchheeeeHh
Confidence            9999999988764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.2e-23  Score=206.40  Aligned_cols=161  Identities=20%  Similarity=0.202  Sum_probs=121.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcC-CCeEEEEEEecCC------cccchHHHHHHHHHHHhhhcCCCCCcEE-Ee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNK------KPFLNQAQIEVQLLEKINKADIHSRYIV-KL  176 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~------~~~~~~~~~e~~~~~~l~~~~~~h~~iv-~l  176 (437)
                      ...+.++|.+.+.||+|+||+||+|++.. +++.||||++...      ......+.+|+.+++.+     .|++++ .+
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-----~h~~iv~~l   87 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-----RGIGVVPQL   87 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-----cCCCCCcEE
Confidence            34567889999999999999999998876 6788899987532      11234577899999888     456666 44


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-CCCcEEEecCCCCC
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL-KPENILLCSPKRSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi-Kp~NIll~~~~~~~  254 (437)
                      ++    .+..|+||||++| +|. .+..     ..   ...++.|++.+|.|||+  .||+|||| ||+|||+  +.++.
T Consensus        88 ~~----~~~~~LVmE~~~G~~L~-~~~~-----~~---~~~~~~~i~~aL~~lH~--~gIiHrDL~KP~NILv--~~~~~  150 (365)
T PRK09188         88 LA----TGKDGLVRGWTEGVPLH-LARP-----HG---DPAWFRSAHRALRDLHR--AGITHNDLAKPQNWLM--GPDGE  150 (365)
T ss_pred             EE----cCCcEEEEEccCCCCHH-HhCc-----cc---hHHHHHHHHHHHHHHHH--CCCeeCCCCCcceEEE--cCCCC
Confidence            43    2467999999977 554 2211     11   14688999999999996  48999999 9999999  56778


Q ss_pred             EEEEeCCCceecCCc-----------cccccccccccChhhhcC
Q psy11727        255 IKIIDFGSSCHVGQT-----------LYQYIQSRYYRSPEVLLG  287 (437)
Q Consensus       255 ikL~DFG~s~~~~~~-----------~~~~~gt~~y~aPE~~~~  287 (437)
                      +||+|||+|......           .....+++.|+|||++..
T Consensus       151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            999999999865332           123456788999999864

>KOG0606|consensus

Probab=99.89  E-value=2.1e-23  Score=217.98  Aligned_cols=221  Identities=27%  Similarity=0.374  Sum_probs=164.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHH-HhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~-~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..+|..++.|..|+||.||.++++.+.+.+|+|+=+ ..          .+++ .+..  ...|.+|             
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~----------lilRnilt~--a~npfvv-------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN----------LILRNILTF--AGNPFVV-------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc----------hhhhccccc--cCCccee-------------
Confidence            457999999999999999999999999999995432 11          1111 1111  1223333             


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                             |+=..+++.-.  .++.+.        +.+++|||+  .||+|||+||+|.+|  ..-|++|++|||+++...
T Consensus       136 -------gDc~tllk~~g--~lPvdm--------vla~Eylh~--ygivhrdlkpdnllI--T~mGhiKlTDfgLsk~GL  194 (1205)
T KOG0606|consen  136 -------GDCATLLKNIG--PLPVDM--------VLAVEYLHS--YGIVHRDLKPDNLLI--TSMGHIKLTDFGLSKKGL  194 (1205)
T ss_pred             -------chhhhhcccCC--CCcchh--------hHHhHhhcc--CCeecCCCCCCccee--eecccccccchhhhhhhh
Confidence                   33333444332  344333        789999995  589999999999999  568999999999985432


Q ss_pred             Cc------------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        268 QT------------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       268 ~~------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      ..                  ....+||+.|+|||++..+.|+..+|+|++|+|+||.+.|..||.|+..++.+.+.+...
T Consensus       195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~  274 (1205)
T KOG0606|consen  195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD  274 (1205)
T ss_pred             hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence            11                  224589999999999999999999999999999999999999999999999888876643


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      ..-|+...                                                            +-..+.+|+|.+
T Consensus       275 i~wpE~de------------------------------------------------------------a~p~Ea~dli~~  294 (1205)
T KOG0606|consen  275 IEWPEEDE------------------------------------------------------------ALPPEAQDLIEQ  294 (1205)
T ss_pred             ccccccCc------------------------------------------------------------CCCHHHHHHHHH
Confidence            32222100                                                            011156899999


Q ss_pred             ccccCCCCCCC---HHHHhcCCCcCcCCCC
Q psy11727        410 MLTYDPKKRIS---PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       410 ~L~~dP~~R~t---~~e~l~Hp~~~~~~~~  436 (437)
                      +|+.+|..|.-   +-++-+|+||+..++.
T Consensus       295 LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  295 LLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             HHHhChHhhcccchhhhhhhccceeecccc
Confidence            99999999974   6678899999987763

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.87  E-value=5e-22  Score=187.27  Aligned_cols=203  Identities=22%  Similarity=0.305  Sum_probs=130.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhh-c---------CCCCC-cEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINK-A---------DIHSR-YIVK  175 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~-~---------~~~h~-~iv~  175 (437)
                      .....+.||.|+++.||.+.+..|++.+|+|+.......    .+...+|......+.. .         .+.-| -+++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            456678999999999999999999999999998633211    1222222222111100 0         00001 1333


Q ss_pred             ecc---eeeEC---C-----EEEEEEEeccCcHHHHHH---hcCCC--CCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q psy11727        176 LKG---HFTWK---N-----HLCLVFELLSYNLYNLIR---NTNFH--GVSLNLTKKFAQQLCCALAFLSSPELSIIHCD  239 (437)
Q Consensus       176 l~~---~~~~~---~-----~~~lV~E~~~~~L~~~l~---~~~~~--~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrD  239 (437)
                      +-+   ++...   .     ..+++|+-+.++|.+++.   .....  ++.......+..|+++.+++||.  .|+||+|
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~--~GlVHgd  170 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS--YGLVHGD  170 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEST
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh--cceEecc
Confidence            321   11111   1     247889999888887653   22211  13334445667999999999995  4899999


Q ss_pred             CCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccccChhhhcC--------CCCCCcchHHHHHHHHHHHHhCCC
Q psy11727        240 LKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG--------IPYDLAIDMWSLGCILVELHTGEP  311 (437)
Q Consensus       240 iKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlG~il~elltg~~  311 (437)
                      |+|+|+|+  +.+|.+.|+||+.....+........+..|.|||....        ..++.+.|.|+||+++|.|.+|..
T Consensus       171 i~~~nfll--~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l  248 (288)
T PF14531_consen  171 IKPENFLL--DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL  248 (288)
T ss_dssp             -SGGGEEE---TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred             cceeeEEE--cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence            99999999  77899999999998888776654455678999998754        247889999999999999999999


Q ss_pred             CCCCCC
Q psy11727        312 LFSGKN  317 (437)
Q Consensus       312 pf~~~~  317 (437)
                      ||....
T Consensus       249 Pf~~~~  254 (288)
T PF14531_consen  249 PFGLSS  254 (288)
T ss_dssp             STCCCG
T ss_pred             CCCCCC
Confidence            998654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.87  E-value=1.1e-21  Score=176.86  Aligned_cols=139  Identities=22%  Similarity=0.233  Sum_probs=105.8

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccc---------------------------hHHHHHHHHHHHhhhcC
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL---------------------------NQAQIEVQLLEKINKAD  167 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~---------------------------~~~~~e~~~~~~l~~~~  167 (437)
                      ...||+|+||+||+|.+. +|+.||||+++......                           .....|..++..+.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999986 89999999997532110                           11234888999988776


Q ss_pred             CCCCcEEEecceeeECCEEEEEEEeccCc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCeeeCCCCCCcE
Q psy11727        168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL-SSPELSIIHCDLKPENI  245 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~~~~~~lV~E~~~~~-L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~L-H~~~~giiHrDiKp~NI  245 (437)
                      +.+|+++..      .+ .+|||||++|+ +.......  .++++..+..++.|++.+|.+| |+  .||+||||||+||
T Consensus        81 v~~p~~~~~------~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~--~giiHrDlkP~NI  149 (190)
T cd05147          81 IPCPEPILL------KS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQD--CRLVHADLSEYNL  149 (190)
T ss_pred             CCCCcEEEe------cC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHE
Confidence            666665421      12 27999999874 43332222  3589999999999999999999 64  4899999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCC
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |++   ++.++|+|||+|.....
T Consensus       150 li~---~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         150 LYH---DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             EEE---CCcEEEEEccccccCCC
Confidence            994   36799999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.87  E-value=9.8e-22  Score=180.05  Aligned_cols=176  Identities=11%  Similarity=0.138  Sum_probs=123.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchH----------HHHHHHHHHHhhhcCCCCCcEE-
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ----------AQIEVQLLEKINKADIHSRYIV-  174 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~----------~~~e~~~~~~l~~~~~~h~~iv-  174 (437)
                      +.+.++|.+.++||.|+||.||++..  ++..+|||+++........          +.+|+..+.++.+.++..+... 
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            34578999999999999999999754  4668999999743322222          4677778888866554443221 


Q ss_pred             --EecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        175 --KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       175 --~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                        .....+......+|||||++| +|.++..      +++    ....+++.+|..||.  .|++|||+||.||++  +.
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~--~gi~H~Dikp~Nili--~~  170 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQ--HGMVSGDPHKGNFIV--SK  170 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHH--cCCccCCCChHHEEE--eC
Confidence              222222223568999999988 7766521      233    345699999999995  489999999999999  45


Q ss_pred             CCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELH  307 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell  307 (437)
                      ++ ++|+|||.+.........         ..+.....|+.++|+||||+++..+.
T Consensus       171 ~g-i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        171 NG-LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CC-EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence            56 999999987654222111         11444556778999999999987654

>KOG1240|consensus

Probab=99.86  E-value=9.7e-23  Score=213.30  Aligned_cols=193  Identities=27%  Similarity=0.386  Sum_probs=147.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .|...+.||.+.|=+|.+|++.+ | .|+||++-+....  ...+.+.+.-.+   ..-..+||++.+.-+-..+...||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik---~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK---FALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH---HHhhcCCcccchHHHHHhhHHHHH
Confidence            68889999999999999997643 4 4999998655422  233333222222   222378899998888778888999


Q ss_pred             EEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee--c
Q psy11727        189 VFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--V  266 (437)
Q Consensus       189 V~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~--~  266 (437)
                      |-+|+..+|+|.+....+  +.+-+.+.|+.||+.||.-+|  +.||+|||||.+|||+++  -.=+.|+||..=+.  +
T Consensus        99 vRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH--~~gVcHGDIKsENILiTS--WNW~~LtDFAsFKPtYL  172 (1431)
T KOG1240|consen   99 VRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCH--KLGVCHGDIKSENILITS--WNWLYLTDFASFKPTYL  172 (1431)
T ss_pred             HHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHH--HcCccccccccceEEEee--echhhhhcccccCCccC
Confidence            999999999999988765  788889999999999999999  679999999999999964  33478999986432  2


Q ss_pred             CCc---cc-----cccccccccChhhhcCC----------C-CCCcchHHHHHHHHHHHHh-CCCCCC
Q psy11727        267 GQT---LY-----QYIQSRYYRSPEVLLGI----------P-YDLAIDMWSLGCILVELHT-GEPLFS  314 (437)
Q Consensus       267 ~~~---~~-----~~~gt~~y~aPE~~~~~----------~-~~~~~DvwSlG~il~ellt-g~~pf~  314 (437)
                      ...   .+     +......|+|||.+...          + .+++-||||+||+++||++ |+|||.
T Consensus       173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence            111   11     11223469999988642          1 5678999999999999999 899995

>KOG4158|consensus

Probab=99.85  E-value=2.8e-21  Score=183.22  Aligned_cols=145  Identities=21%  Similarity=0.285  Sum_probs=116.7

Q ss_pred             CCCCcEEEecceeeEC---------------------------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHH
Q psy11727        168 IHSRYIVKLKGHFTWK---------------------------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ  220 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~~---------------------------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~q  220 (437)
                      ..|||||++.++|.+.                           ..+|+||.....+|.+++..+.   .+......++.|
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQ  349 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQ  349 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHH
Confidence            4799999999998652                           4699999999999999998765   577888899999


Q ss_pred             HHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC--CEEEEeCCCceecCC---------ccccccccccccChhhhcCCC
Q psy11727        221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRS--AIKIIDFGSSCHVGQ---------TLYQYIQSRYYRSPEVLLGIP  289 (437)
Q Consensus       221 i~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~--~ikL~DFG~s~~~~~---------~~~~~~gt~~y~aPE~~~~~~  289 (437)
                      ++.|+.|||.|  ||.|||+|++|||+.-|+++  .+.|+|||++--...         .....-|.-.-||||+....+
T Consensus       350 lLEav~hL~~h--gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  350 LLEAVTHLHKH--GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHHHHHc--cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence            99999999966  89999999999999655554  478899998632111         112234567789999987543


Q ss_pred             ------CCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        290 ------YDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       290 ------~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                            --.+.|.|+.|.+.||+++...||.+..
T Consensus       428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG  461 (598)
T KOG4158|consen  428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG  461 (598)
T ss_pred             CCceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence                  1257999999999999999999998844

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.84  E-value=3.3e-20  Score=167.61  Aligned_cols=139  Identities=19%  Similarity=0.209  Sum_probs=104.5

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCccc---------------------------chHHHHHHHHHHHhhhcC
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---------------------------LNQAQIEVQLLEKINKAD  167 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---------------------------~~~~~~e~~~~~~l~~~~  167 (437)
                      ...||+|+||+||+|.+. +|+.||||+++.....                           ......|...+.++.+.+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            568999999999999987 8999999999754211                           011245777788887665


Q ss_pred             CCCCcEEEecceeeECCEEEEEEEeccCc-HHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~~~~~~lV~E~~~~~-L~~-~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      +..|.++..     .  ..+|||||++|. +.. .+..   ..++...+..++.|++.++.+||+. .||+||||||+||
T Consensus        81 i~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~-~givHrDlkP~NI  149 (190)
T cd05145          81 VPVPEPILL-----K--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQE-AGLVHGDLSEYNI  149 (190)
T ss_pred             CCCceEEEe-----c--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHh-CCEecCCCChhhE
Confidence            544443321     1  248999999874 333 3332   3478889999999999999999961 4899999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCC
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |++   ++.++|+|||++.....
T Consensus       150 ll~---~~~~~liDFG~a~~~~~  169 (190)
T cd05145         150 LYH---DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EEE---CCCEEEEEcccceecCC
Confidence            994   57899999999976654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1166|consensus

Probab=99.84  E-value=6.6e-21  Score=202.94  Aligned_cols=195  Identities=25%  Similarity=0.360  Sum_probs=156.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .-.+.|.|.+.||+|+||+||+|.... |+.||||+-+...  ..++..=.+++++|. .. .-+.|..+..++...+.-
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~--~WEfYI~~q~~~RLk-~~-~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPN--PWEFYICLQVMERLK-PQ-MLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCC--ceeeeehHHHHHhhc-hh-hhcchHHHHHHHccCCcc
Confidence            335679999999999999999998766 9999999975433  344444455556654 11 113477777777888888


Q ss_pred             EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-----CCCCCEEEEeC
Q psy11727        187 CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-----PKRSAIKIIDF  260 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-----~~~~~ikL~DF  260 (437)
                      +||+||.+ |+|++++...  +.+++..+..|+.||+..+..||.  .+|||+||||+|+||..     .+...++|+||
T Consensus       770 ~lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~--~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHA--MGIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             eeeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHh--cceecccCCcceeEeecccCCCCcccceEEEec
Confidence            99999996 5899998843  569999999999999999999995  58999999999999942     12345999999


Q ss_pred             CCceec-----CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy11727        261 GSSCHV-----GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE  310 (437)
Q Consensus       261 G~s~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~  310 (437)
                      |.|..+     +.......+|-.+-++|+..|.+++..+|.|.|+.+++.||.|+
T Consensus       846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            999654     22334456788899999999999999999999999999999987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=7.6e-20  Score=164.31  Aligned_cols=183  Identities=15%  Similarity=0.121  Sum_probs=134.0

Q ss_pred             eeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccch-----HHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~-----~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+...|++|+||+|+.+..  .+..++.+.+........     .+.+|+.+++.+.+    ++++++++++    +..+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~----~~~vP~ll~~----~~~~   74 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG----LPRTPRLLHW----DGRH   74 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC----CCCCCEEEEE----cCEE
Confidence            4567899999999998854  677888887765444333     47789999999853    3556666664    4469


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-CCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDL-KPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDi-Kp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++|||+.| +|.+.+..        . ...++.|++.+|.++|.  .||+|||| ||+|||+  +.++.++|+|||+|..
T Consensus        75 lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~--~GIvHrDL~kp~NILv--~~~g~i~LIDFG~A~~  141 (218)
T PRK12274         75 LDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHR--CGVAHNDLAKEANWLV--QEDGSPAVIDFQLAVR  141 (218)
T ss_pred             EEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHH--CcCccCCCCCcceEEE--cCCCCEEEEECCCcee
Confidence            99999977 56543211        1 13578899999999995  48999999 7999999  5677899999999985


Q ss_pred             cCCccc----------------cccccccccChhhhcCC-CCC-CcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        266 VGQTLY----------------QYIQSRYYRSPEVLLGI-PYD-LAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       266 ~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      ......                ....++.|++|+...-. ..+ ...++++.|+-+|.++|+..|+.++++
T Consensus       142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~  212 (218)
T PRK12274        142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE  212 (218)
T ss_pred             cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence            543221                01236677777755432 233 567888999999999999998877654

>PRK10345 hypothetical protein; Provisional

Probab=99.82  E-value=1.6e-19  Score=164.74  Aligned_cols=139  Identities=17%  Similarity=0.170  Sum_probs=108.2

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCC-cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC---E-EEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN---H-LCLV  189 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~---~-~~lV  189 (437)
                      .+.||+|+||.||.  ++.++.. +||++... ........+|+.++..+.+.+..||||++++++++++.   . +.+|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            56899999999995  5666655 69988643 22345788999999999888889999999999999874   4 3488


Q ss_pred             EEecc---CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHhcCCCCCeeeCCCCCCcEEEecC--CCCCEEEEeCCCc
Q psy11727        190 FELLS---YNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL-AFLSSPELSIIHCDLKPENILLCSP--KRSAIKIIDFGSS  263 (437)
Q Consensus       190 ~E~~~---~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL-~~LH~~~~giiHrDiKp~NIll~~~--~~~~ikL~DFG~s  263 (437)
                      |||++   ++|.+++...   .+++.  ..++.|++.++ +|||++  +||||||||+|||+...  .++.++|+||+.+
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~--~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN--RIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC--CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            99954   5899999664   25555  35677888777 999965  79999999999999532  3447999995443

>KOG1033|consensus

Probab=99.79  E-value=5.7e-20  Score=180.84  Aligned_cols=118  Identities=31%  Similarity=0.440  Sum_probs=101.4

Q ss_pred             CEEEEEEEecc-CcHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRN-TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~-~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .++||.|++|. .+|.+|+.. ......++.....++.|++.|+.|   +  |.+|+|+||.||++  ..+..+||.|||
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k--~~ihrdlkp~nif~--~~d~q~kIgDFg  401 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K--GLIHRDLKPSNIFF--SDDDQLKIGDFG  401 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c--cchhhhcccccccc--ccchhhhhhhhh
Confidence            47999999995 589999973 334557889999999999999999   2  79999999999999  445579999999


Q ss_pred             CceecCCc---------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh
Q psy11727        262 SSCHVGQT---------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT  308 (437)
Q Consensus       262 ~s~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt  308 (437)
                      +.+.....         .+...||..||+||.+.+..|+.++||||||+||+|++.
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            98765432         345688999999999999999999999999999999997

>smart00090 RIO RIO-like kinase

Probab=99.79  E-value=1.2e-18  Score=162.63  Aligned_cols=145  Identities=19%  Similarity=0.154  Sum_probs=107.6

Q ss_pred             CeeeeceecccCceEEEEEE-EcCCCeEEEEEEecCCccc-------------------------chHHHHHHHHHHHhh
Q psy11727        111 RYEIDTLLGKGSFGQVVKAF-DHEEKCQVAIKIIKNKKPF-------------------------LNQAQIEVQLLEKIN  164 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~-~~~~~~~vaiK~i~~~~~~-------------------------~~~~~~e~~~~~~l~  164 (437)
                      -|.+.+.||+|+||+||+|. +..+|+.||+|+++.....                         ......|..++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            38889999999999999998 6778999999999743210                         012457888888886


Q ss_pred             hcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCC-eeeCCCCC
Q psy11727        165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS-IIHCDLKP  242 (437)
Q Consensus       165 ~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~g-iiHrDiKp  242 (437)
                      ...+.-|   ++++.   . ..++||||++| +|.......  ..+....+..++.||+.+|++||++  | |+||||||
T Consensus       109 ~~~i~~p---~~~~~---~-~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~--g~iiH~Dikp  177 (237)
T smart00090      109 EAGVPVP---KPIAW---R-RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE--GELVHGDLSE  177 (237)
T ss_pred             hcCCCCC---eeeEe---c-CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc--CCEEeCCCCh
Confidence            5332222   33221   2 34799999988 454433222  2356667789999999999999964  7 99999999


Q ss_pred             CcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        243 ENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       243 ~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      +||++.   ++.++|+|||.+...+.+
T Consensus       178 ~NIli~---~~~i~LiDFg~a~~~~~~  201 (237)
T smart00090      178 YNILVH---DGKVVIIDVSQSVELDHP  201 (237)
T ss_pred             hhEEEE---CCCEEEEEChhhhccCCc
Confidence            999994   677999999998765543

>KOG0195|consensus

Probab=99.76  E-value=5.2e-19  Score=160.26  Aligned_cols=200  Identities=22%  Similarity=0.276  Sum_probs=150.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ...+..+|...-.|+.|+|++..+  .+++|++.-..   .....+..|.-.++.     +.||||..+++.|....++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lri-----fshpnilpvlgacnsppnlv  263 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRI-----FSHPNILPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceee-----ecCCchhhhhhhccCCCCce
Confidence            344567788899999999988655  46667764221   122334444434433     38999999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE--EEeCCCce
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK--IIDFGSSC  264 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik--L~DFG~s~  264 (437)
                      +|..||+. +|+.++.....--+...++.+|+..|+.+++|||+-+.-|.---|....|++  |++...+  .+|--+|.
T Consensus       264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi--dedltarismad~kfsf  341 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI--DEDLTARISMADTKFSF  341 (448)
T ss_pred             EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe--cchhhhheecccceeee
Confidence            99999975 8999998876556788999999999999999999875445556788999999  5555544  44544443


Q ss_pred             ecCCccccccccccccChhhhcCCCCC---CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYD---LAIDMWSLGCILVELHTGEPLFSGKNEVDQMT  323 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlG~il~elltg~~pf~~~~~~~~~~  323 (437)
                      ....    ..-++.|++||.+..++-+   .++|+|||++++||+.|.+.||..-++.+.--
T Consensus       342 qe~g----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm  399 (448)
T KOG0195|consen  342 QEVG----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM  399 (448)
T ss_pred             eccc----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh
Confidence            2222    2347889999999887654   57999999999999999999999877765533

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=3.3e-17  Score=150.26  Aligned_cols=133  Identities=21%  Similarity=0.271  Sum_probs=101.5

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCccc---------chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +.||+|++|.||+|..  +|..|++|+.......         ......|..++..+.+.++..|     ..++.+.+..
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p-----~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVP-----AVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----eEEEEeCCCC
Confidence            5789999999999976  6778999986532211         1245568888888765444333     3334566778


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||++| +|.+++....     . ....++.+++.+|.+||+  .|++|||++|.|||+.   .+.++|+|||++..
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~--~~i~H~Dl~p~Nil~~---~~~~~liDf~~a~~  143 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHS--AGIIHGDLTTSNMILS---GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHh--CCcccCCCCcccEEEE---CCCEEEEECCcccC
Confidence            999999976 7888775432     2 778999999999999995  4899999999999994   66799999999865


Q ss_pred             c
Q psy11727        266 V  266 (437)
Q Consensus       266 ~  266 (437)
                      .
T Consensus       144 ~  144 (211)
T PRK14879        144 S  144 (211)
T ss_pred             C
Confidence            3

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.71  E-value=1e-16  Score=145.74  Aligned_cols=137  Identities=23%  Similarity=0.238  Sum_probs=101.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-----------------------chHHHHHHHHHHHhhhcCC
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----------------------LNQAQIEVQLLEKINKADI  168 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-----------------------~~~~~~e~~~~~~l~~~~~  168 (437)
                      |.+.+.||+|+||.||++... +|+.||||+++.....                       ......|..++..+.+.++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            778899999999999999864 7999999987643210                       1124567777777755432


Q ss_pred             CCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                         .+...++    ....++||||++| +|.....        ......++.+++.++.++|.  .||+||||||+||++
T Consensus        96 ---~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~--~gi~H~Dl~p~Nill  158 (198)
T cd05144          96 ---PVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYK--HGIIHGDLSEFNILV  158 (198)
T ss_pred             ---CCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHH--CCCCcCCCCcccEEE
Confidence               2333332    2445899999987 5544321        13456788999999999995  589999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCC
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~  268 (437)
                        ++++.++|+|||.+.....
T Consensus       159 --~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         159 --DDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             --cCCCcEEEEECCccccCCC
Confidence              6688899999999865544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0590|consensus

Probab=99.71  E-value=1e-18  Score=182.41  Aligned_cols=258  Identities=24%  Similarity=0.338  Sum_probs=187.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcC-CCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ..|.+.+.||+|+|+.|-.+.+.. +...+|+|.+....   ........|..+...+.    .|.|++.+++.....+.
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s----~h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS----KHSNTVHMIEPSSSPRS   95 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc----ccccccccCCccCCCcc
Confidence            468888889999999999987643 34457777765432   11222233555544443    38899999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCCCc
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFGSS  263 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG~s  263 (437)
                      .++++++..| .+++.+......+.+...+..++.|+..++.|+|. +.++.|+||||+|.++  +..+ .++++|||+|
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~-~~~~~h~~ikP~n~~l--~~s~~~l~~~df~~A  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP-ENGVTHRDIKPSNSLL--DESGSALKIADFGLA  172 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc-ccccccCCCCCccchh--ccCCCcccCCCchhh
Confidence            9999999855 67777633333367888999999999999999995 2489999999999999  6677 8999999999


Q ss_pred             eecCC-c-----cccccc-cccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQ-T-----LYQYIQ-SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~-~-----~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ..... .     ....+| ++.|+|||...+.. .....|+||.|+++.-+++|..|+......+.              
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~--------------  238 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG--------------  238 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc--------------
Confidence            87654 1     234678 99999999998854 45789999999999999999999876443220              


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                               .|+.....        . .. ..+..+..+                         .....+++.++|..+|
T Consensus       239 ---------~~~~~~~~--------~-~~-~~~~~~~~~-------------------------~~~~~~~l~k~l~~~~  274 (601)
T KOG0590|consen  239 ---------RYSSWKSN--------K-GR-FTQLPWNSI-------------------------SDQAHDLLHKILKENP  274 (601)
T ss_pred             ---------cceeeccc--------c-cc-cccCccccC-------------------------ChhhhhcccccccCCc
Confidence                     00000000        0 00 000000000                         0134789999999999


Q ss_pred             CCCCCHHHHhcCCCcCc
Q psy11727        416 KKRISPTNVLRHEFFLK  432 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~  432 (437)
                      ..|.+.+++-.+||+..
T Consensus       275 ~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  275 SNRLSIEELKLDNWLSS  291 (601)
T ss_pred             hhccccccccccccccc
Confidence            99999999999999987

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.69  E-value=2e-16  Score=143.68  Aligned_cols=129  Identities=21%  Similarity=0.230  Sum_probs=97.3

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .||+|+||.||+|.  .++..|++|.......         ...+...|..++..+.+.++..|.+.     +...+..+
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~-----~~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVY-----DVDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE-----EEECCCCE
Confidence            37999999999997  3567899998653221         12345578888888876554444332     33556678


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||++| +|.+++....   .      .++.|++.+|.+||+  .|++|+|++|.||++.   ++.++++|||++...
T Consensus        74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~--~gi~H~Dl~~~Nil~~---~~~~~liDfg~a~~~  139 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHK--AGIVHGDLTTSNIIVR---DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHH--CCeecCCCCcceEEEE---CCcEEEEECCCCcCC
Confidence            99999976 7777664421   1      889999999999995  5899999999999994   677999999998653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1023|consensus

Probab=99.68  E-value=1.4e-16  Score=159.68  Aligned_cols=146  Identities=21%  Similarity=0.325  Sum_probs=120.8

Q ss_pred             CCCCCcEEEecceeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        167 DIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       167 ~~~h~~iv~l~~~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      .+.|.|+.++++.+.+....++|.+||+ |+|.|.+.... ..+++-....++++|+.+|+|||+...+ .|+.+++.|.
T Consensus         3 ~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~-~hg~l~s~nC   80 (484)
T KOG1023|consen    3 QLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIG-YHGALKSSNC   80 (484)
T ss_pred             ccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcce-eeeeeccccc
Confidence            4578999999999999999999999995 58999888754 4588888999999999999999986544 9999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCC-----ccccccccccccChhhhcCCC-------CCCcchHHHHHHHHHHHHhCCCCC
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSRYYRSPEVLLGIP-------YDLAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlG~il~elltg~~pf  313 (437)
                      ++  +.+..+||+|||+......     ......-..-|.|||.+.+..       .+.+.|+||||++++|+++...||
T Consensus        81 lv--d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~  158 (484)
T KOG1023|consen   81 LV--DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF  158 (484)
T ss_pred             ee--eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence            99  7899999999999765532     111112244599999998742       356799999999999999999999


Q ss_pred             CCC
Q psy11727        314 SGK  316 (437)
Q Consensus       314 ~~~  316 (437)
                      ...
T Consensus       159 ~~~  161 (484)
T KOG1023|consen  159 DLR  161 (484)
T ss_pred             ccc
Confidence            763

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.67  E-value=6.8e-16  Score=138.76  Aligned_cols=138  Identities=20%  Similarity=0.280  Sum_probs=94.1

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHH-------------------------HHHHHHHHHhhhcCCC
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA-------------------------QIEVQLLEKINKADIH  169 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~-------------------------~~e~~~~~~l~~~~~~  169 (437)
                      .+.||+|+||+||+|.+. +++.||||+++.........                         ..|...+..+....+ 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-   79 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV-   79 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC-
Confidence            467999999999999876 78999999987432211111                         234444444443221 


Q ss_pred             CCcEEEecceeeECCEEEEEEEeccC-cHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLY-NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       170 h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~-~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                        .+.+.+++    ...++||||+++ .+. ..+....   .. ..++.++.+++.++.++|.. .||+|+||||+||++
T Consensus        80 --~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~-~~ivH~Dl~p~Nili  148 (187)
T cd05119          80 --PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYRE-AGLVHGDLSEYNILV  148 (187)
T ss_pred             --CCCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhc-cCcCcCCCChhhEEE
Confidence              12222222    245899999987 221 2222211   11 67789999999999999962 589999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCC
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      +   ++.++|+|||++.....
T Consensus       149 ~---~~~~~liDfg~a~~~~~  166 (187)
T cd05119         149 D---DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             E---CCcEEEEECcccccccC
Confidence            4   67899999999965543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.66  E-value=8.5e-16  Score=160.43  Aligned_cols=136  Identities=20%  Similarity=0.195  Sum_probs=99.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---------ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ...|...+.||+|+||+||++.....  .+++|+...+.         ....+...|..++..+.     |++++....+
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~p~~~  404 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-----RAGVPTPVIY  404 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-----ccCCCeeEEE
Confidence            44567789999999999999976544  34444322111         11234567888888874     4455555555


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +.+.+..++||||++| +|.+++.          ....++.|++.+|.+||+  .|++||||||+|||+   +++.++|+
T Consensus       405 ~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~--~giiHrDlkp~NILl---~~~~~~li  469 (535)
T PRK09605        405 DVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK--AGIVHGDLTTSNFIV---RDDRLYLI  469 (535)
T ss_pred             EEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh--CCCccCCCChHHEEE---ECCcEEEE
Confidence            5666678899999976 7877765          346789999999999995  489999999999999   24579999


Q ss_pred             eCCCceec
Q psy11727        259 DFGSSCHV  266 (437)
Q Consensus       259 DFG~s~~~  266 (437)
                      |||++...
T Consensus       470 DFGla~~~  477 (535)
T PRK09605        470 DFGLGKYS  477 (535)
T ss_pred             eCcccccC
Confidence            99998653

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.65  E-value=1e-15  Score=131.50  Aligned_cols=135  Identities=23%  Similarity=0.206  Sum_probs=107.1

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      +.+.||+|.++.||++....  ..+++|....... ...+..|..+++.+.+.   ..++++++.++...+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~---~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK---GLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc---CCCCCeEEEEcCCCCccEEEEEec
Confidence            45789999999999998744  6799999865433 45678899999999764   245667777777778899999999


Q ss_pred             cCc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCC-CCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        194 SYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE-LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       194 ~~~-L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~-~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++. +..+         +......++.+++.+|++||... .+++|+|++|+||++.  +.+.++++|||.+..
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~--~~~~~~l~Df~~~~~  138 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD--DGKILGIIDWEYAGY  138 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE--CCcEEEEEecccccC
Confidence            774 3322         45667788999999999999642 4799999999999994  467899999998853

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601|consensus

Probab=99.58  E-value=2.1e-15  Score=151.42  Aligned_cols=250  Identities=24%  Similarity=0.229  Sum_probs=184.9

Q ss_pred             ccCeeeeceecc--cCceEEEEEEE--cCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGK--GSFGQVVKAFD--HEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~--G~fg~V~~~~~--~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ...+.+...+|.  |.+|.||.+..  ..++..+|+|.-+...   .....-.+|......+    -.|++.++.+..++
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i----~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI----DSHENPVRDSPAWE  188 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc----CccccccccCcccc
Confidence            446778888999  99999999988  8889999999743211   1112222233222222    26779999999999


Q ss_pred             ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEE
Q psy11727        182 WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC----ALAFLSSPELSIIHCDLKPENILLCSPKR-SAIK  256 (437)
Q Consensus       182 ~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~----aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ik  256 (437)
                      ..+.+++-+|+++..|..+..... ..++...++....+...    ||..+|+.  +++|-|+||+||++.  ++ ..++
T Consensus       189 ~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~--~~~~~~~kp~~i~~~--~~~~s~~  263 (524)
T KOG0601|consen  189 GSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN--NIVHDDLKPANIFTT--SDWTSCK  263 (524)
T ss_pred             cCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC--cccccccchhheecc--cccceee
Confidence            999999999999998888877654 34788899999999999    99999975  699999999999994  45 7799


Q ss_pred             EEeCCCceecCCcc--------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHH
Q psy11727        257 IIDFGSSCHVGQTL--------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK--NEVDQMTKII  326 (437)
Q Consensus       257 L~DFG~s~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~--~~~~~~~~i~  326 (437)
                      ++|||+...++...        ....|..-|++||...+ .++...|++|||.++.+..+|..++...  +...++..+.
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            99999988775432        12256677999999876 6789999999999999999988666543  2222211110


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                           .|.+++          +                                             +++.    .+...
T Consensus       343 -----ip~e~~----------~---------------------------------------------~~s~----~l~~~  358 (524)
T KOG0601|consen  343 -----IPLEFC----------E---------------------------------------------GGSS----SLRSV  358 (524)
T ss_pred             -----Cchhhh----------c---------------------------------------------Ccch----hhhhH
Confidence                 111111          0                                             1111    23448


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      +..|++.+|..|++++.++.|+++..
T Consensus       359 ~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  359 TSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             HHHhcCcchhhhhHHHHHhccccccc
Confidence            99999999999999999999999864

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.56  E-value=8.7e-14  Score=130.06  Aligned_cols=134  Identities=17%  Similarity=0.170  Sum_probs=95.9

Q ss_pred             ceec-ccCceEEEEEEEcCCCeEEEEEEecCCc--------------ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        116 TLLG-KGSFGQVVKAFDHEEKCQVAIKIIKNKK--------------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       116 ~~lG-~G~fg~V~~~~~~~~~~~vaiK~i~~~~--------------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ..|| .||.|+||.+..  .+..++||.+....              ....+..+|..++..+.+.++.-   +..+++.
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~v---P~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPV---PRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCC---ceeEeee
Confidence            4567 888889998865  36789999875311              12245677999999997765433   3333333


Q ss_pred             eE-CC---EEEEEEEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        181 TW-KN---HLCLVFELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       181 ~~-~~---~~~lV~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      .. ..   ..++|||+++|  +|.+++...   .++..    .+.||+.+|.+||.  .||+||||||+|||+  +.++.
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~--~GI~HrDlkp~NILv--~~~~~  180 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHD--AGVYHADLNAHNILL--DPDGK  180 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHH--CCCCCCCCCchhEEE--cCCCC
Confidence            22 22   23699999975  677777543   34543    36789999999995  489999999999999  55668


Q ss_pred             EEEEeCCCcee
Q psy11727        255 IKIIDFGSSCH  265 (437)
Q Consensus       255 ikL~DFG~s~~  265 (437)
                      ++|+|||.+..
T Consensus       181 v~LIDfg~~~~  191 (239)
T PRK01723        181 FWLIDFDRGEL  191 (239)
T ss_pred             EEEEECCCccc
Confidence            99999998854

>KOG0606|consensus

Probab=99.56  E-value=1.4e-15  Score=160.13  Aligned_cols=262  Identities=24%  Similarity=0.280  Sum_probs=190.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .+.+.+.+-+-.|+++.++.+.-..+|...++|...............+.- +.-.....++|.++...-.|.-....+|
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~-~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRS-KSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCC-ccCccccCCCCceecccCCCCCCCCcch
Confidence            466888889999999999999888888777777654221111100000000 0000111245667766666667788999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |++|+.+ +|...+.+..  ..+...++.+...+..++++||+.  .++|+|++|.|+|.  ...++.+++|||.....+
T Consensus       882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~--~r~h~~~~p~~~l~--~~~gh~~l~~~~t~~~vg  955 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSS--LRKHRDLKPDSLLI--AYDGHRPLTDFGTLSKVG  955 (1205)
T ss_pred             hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccc--hhhcccccccchhh--cccCCcccCccccccccc
Confidence            9999965 7888777654  478888899999999999999964  48999999999999  678889999998431110


Q ss_pred             ----------------------------------CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCC
Q psy11727        268 ----------------------------------QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       268 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf  313 (437)
                                                        .......+|+.|.+||...+......+|+|++|++++|.++|.+||
T Consensus       956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen  956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred             cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence                                              0012346789999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCC
Q psy11727        314 SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP  393 (437)
Q Consensus       314 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (437)
                      ........++.|....-.                                    +                |.+      
T Consensus      1036 na~tpq~~f~ni~~~~~~------------------------------------~----------------p~g------ 1057 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRDIP------------------------------------W----------------PEG------ 1057 (1205)
T ss_pred             CCcchhhhhhccccCCCC------------------------------------C----------------CCC------
Confidence            998877666555331100                                    0                000      


Q ss_pred             CCChhhhhHHHHHHHHccccCCCCCCCHH---HHhcCCCcCcCCCCC
Q psy11727        394 GHSLADYMKFKDLILRMLTYDPKKRISPT---NVLRHEFFLKHSVDN  437 (437)
Q Consensus       394 ~~~~~~~~~~~dli~~~L~~dP~~R~t~~---e~l~Hp~~~~~~~~~  437 (437)
                        ........++++.++|..+|.+|..+.   ++-.||||+..+++|
T Consensus      1058 --~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1058 --PEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred             --ccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCccc
Confidence              011112458999999999999999988   888999999999875

>KOG1266|consensus

Probab=99.53  E-value=1e-15  Score=142.50  Aligned_cols=238  Identities=22%  Similarity=0.277  Sum_probs=158.5

Q ss_pred             EEEEEEEcCCCeEEEEEEecC---CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-----EEEEEEEec-cC
Q psy11727        125 QVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-----HLCLVFELL-SY  195 (437)
Q Consensus       125 ~V~~~~~~~~~~~vaiK~i~~---~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-----~~~lV~E~~-~~  195 (437)
                      .||++.+...|..|..-.++.   +........++...-..+.   ..|-|||+++.++.+..     ...++.||| .|
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllq---lvHsnlvkfH~yw~d~K~~e~~rviFiteymssg  157 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQ---LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSG  157 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHH---HHHHHHHHHHHhhcccccccccceEEEEecccch
Confidence            456676666666665443321   1111122223333333332   25778999999887654     588999999 56


Q ss_pred             cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce-ecC-C---
Q psy11727        196 NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-HVG-Q---  268 (437)
Q Consensus       196 ~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~-~~~-~---  268 (437)
                      .+.++|+...  ...+.....++|+-||+.||.|||+....|+|+++.-+-|++  ..+|-||+.--.-.. ... .   
T Consensus       158 s~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi--q~ngLIkig~~ap~s~h~s~~~~~  235 (458)
T KOG1266|consen  158 SLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI--QHNGLIKIGSVAPDSTHPSVNSTR  235 (458)
T ss_pred             hHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee--cCCceEEecccCccccchhhhhhh
Confidence            8888887643  245788888999999999999999998899999999999999  577777764322111 100 0   


Q ss_pred             --ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 --TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL-FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                        ......+-++|.|||.-..-..+.++|||+||.+..+|..|..- -.+.+..+.-..|...                 
T Consensus       236 ~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~-----------------  298 (458)
T KOG1266|consen  236 EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANV-----------------  298 (458)
T ss_pred             HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhh-----------------
Confidence              01113456789999987776778899999999999999988733 3333332222222111                 


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                                     |++.+++                  .-+++|.+||+..|..||++.+++
T Consensus       299 -------------------------------i~~len~------------------lqr~~i~kcl~~eP~~rp~ar~ll  329 (458)
T KOG1266|consen  299 -------------------------------IIGLENG------------------LQRGSITKCLEGEPNGRPDARLLL  329 (458)
T ss_pred             -------------------------------eeeccCc------------------cccCcCcccccCCCCCCcchhhhh
Confidence                                           1111110                  115789999999999999999999


Q ss_pred             cCCCcCcC
Q psy11727        426 RHEFFLKH  433 (437)
Q Consensus       426 ~Hp~~~~~  433 (437)
                      .||-+=++
T Consensus       330 fHpllfeV  337 (458)
T KOG1266|consen  330 FHPLLFEV  337 (458)
T ss_pred             cCceeeec
Confidence            99986543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.42  E-value=1.5e-12  Score=132.08  Aligned_cols=144  Identities=19%  Similarity=0.212  Sum_probs=92.9

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchH------------------------------------------
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ------------------------------------------  152 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~------------------------------------------  152 (437)
                      .+.||.|++|+||+|+.+ +|+.||||+.+..-  ...                                          
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i--~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGI--EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCc--HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            357999999999999864 78999999986431  111                                          


Q ss_pred             -HHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHhc
Q psy11727        153 -AQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC-ALAFLS  229 (437)
Q Consensus       153 -~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~-aL~~LH  229 (437)
                       +..|...++++...--+++++.--.-+.......+|||||++| +|.+...... .+.   ....++.+++. .+..+|
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~  274 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVL  274 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHH
Confidence             2234444444433222333322211122223457899999977 6766654321 112   23456666655 466778


Q ss_pred             CCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       230 ~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      .  .|++|+|++|.||++  +.++.++|+|||++...+..
T Consensus       275 ~--~g~~H~D~hPgNilv--~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       275 R--DGFFHADLHPGNIFV--LKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             h--CCceeCCCCcccEEE--CCCCcEEEEeCCCeeECCHH
Confidence            4  489999999999999  66788999999999777543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.41  E-value=2.5e-13  Score=139.60  Aligned_cols=149  Identities=16%  Similarity=0.243  Sum_probs=93.2

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-----------------------------------cchH
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-----------------------------------FLNQ  152 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-----------------------------------~~~~  152 (437)
                      +...|+. +.||.|++|+||+|+.+.+|+.||||+++..-.                                   +...
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            3456776 789999999999999988899999999974310                                   0011


Q ss_pred             H------HHHHHHHHHhhhcCCCCCcEEEecceee-ECCEEEEEEEeccC-cHHHH--HHhcCC--CCCCHHHHHHHHHH
Q psy11727        153 A------QIEVQLLEKINKADIHSRYIVKLKGHFT-WKNHLCLVFELLSY-NLYNL--IRNTNF--HGVSLNLTKKFAQQ  220 (437)
Q Consensus       153 ~------~~e~~~~~~l~~~~~~h~~iv~l~~~~~-~~~~~~lV~E~~~~-~L~~~--l~~~~~--~~ls~~~~~~i~~q  220 (437)
                      .      ..|...+.++... ..+...+.+-..+. .....+|||||+.| .+.+.  +...+.  ..+....+..++.|
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~-f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q  275 (537)
T PRK04750        197 LHDELDLMREAANASQLRRN-FEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ  275 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHH-ccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            1      1233333333221 11222222222222 23456799999977 66653  222211  12445555566666


Q ss_pred             HHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC----CEEEEeCCCceecCCc
Q psy11727        221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRS----AIKIIDFGSSCHVGQT  269 (437)
Q Consensus       221 i~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~----~ikL~DFG~s~~~~~~  269 (437)
                      ++.         .|++|+|+||.||++.  .++    .++++|||++...+..
T Consensus       276 if~---------~GffHaDpHPGNIlv~--~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 VFR---------DGFFHADMHPGNIFVS--YDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHh---------CCeeeCCCChHHeEEe--cCCCCCCeEEEEecceEEECCHH
Confidence            653         3899999999999994  444    8999999998776543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.39  E-value=6.1e-12  Score=113.01  Aligned_cols=140  Identities=21%  Similarity=0.243  Sum_probs=101.9

Q ss_pred             eceecccCceEEEEEEEcC------CCeEEEEEEecCCc--------------c---------cchH----HHHHHHHHH
Q psy11727        115 DTLLGKGSFGQVVKAFDHE------EKCQVAIKIIKNKK--------------P---------FLNQ----AQIEVQLLE  161 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~------~~~~vaiK~i~~~~--------------~---------~~~~----~~~e~~~~~  161 (437)
                      ...||.|.-+.||.|....      .+..+|||+.+...              .         ....    ...|...+.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3468999999999997653      35789999875211              0         0111    236999999


Q ss_pred             HhhhcCCCCCcEEEecceeeECCEEEEEEEeccCc-HHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCeeeC
Q psy11727        162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQLCCALAFL-SSPELSIIHC  238 (437)
Q Consensus       162 ~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~~-L~~-~l~~~~~~~ls~~~~~~i~~qi~~aL~~L-H~~~~giiHr  238 (437)
                      ++...++.-|.++-+       ..-+|||||++++ +.. .++..   .++......+..+++.+|..| |  +.||||+
T Consensus        82 rl~~~Gv~vP~pi~~-------~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H--~~glVHG  149 (197)
T cd05146          82 RMQKAGIPCPEVVVL-------KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYK--ECNLVHA  149 (197)
T ss_pred             HHHHcCCCCCeEEEe-------cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHH--hCCeecC
Confidence            999888877766632       4467899999763 322 23322   255566778889999999998 7  4589999


Q ss_pred             CCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        239 DLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       239 DiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||++.|||+.   ++.+.|+|||.+.....+
T Consensus       150 DLs~~NIL~~---~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         150 DLSEYNMLWH---DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             CCCHHHEEEE---CCcEEEEECCCceeCCCC
Confidence            9999999994   356999999998766543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.34  E-value=7.1e-12  Score=110.52  Aligned_cols=129  Identities=20%  Similarity=0.135  Sum_probs=91.3

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEecc
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS  194 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~  194 (437)
                      .+.|+.|.++.||++...  +..|++|+.............|..+++.+....+ .|   +++.+.  ....++|||+++
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~P---~~~~~~--~~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI-GP---KLYYFD--PETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC-CC---ceEEEe--CCCCeEEEEecC
Confidence            457899999999999754  7789999986543223346789999998876543 23   333332  233579999998


Q ss_pred             C-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCC---CCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        195 Y-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE---LSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       195 ~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~---~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      | ++.+.    .      .....++.+++.+|+.||...   .+++|+|++|.||+++   ++.++++|||.+.
T Consensus        75 G~~l~~~----~------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~---~~~~~liDf~~a~  135 (170)
T cd05151          75 GSELLTE----D------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD---DGRLWLIDWEYAG  135 (170)
T ss_pred             CCccccc----c------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE---CCeEEEEeccccc
Confidence            8 44322    0      112346789999999999652   1369999999999994   4569999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601|consensus

Probab=99.31  E-value=2e-12  Score=130.08  Aligned_cols=201  Identities=21%  Similarity=0.186  Sum_probs=146.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEc-CCCeEEEEEEecCCcccchH---HHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDH-EEKCQVAIKIIKNKKPFLNQ---AQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~-~~~~~vaiK~i~~~~~~~~~---~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ......+|..+..||.|.|+.|+.+... .++..|++|.+.+.......   ...|+.+...+.    .|.+++.....|
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~----~~~~~~g~~~~W  335 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG----SHLPSVGKNSSW  335 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh----cccccCCCCCCc
Confidence            3455678999999999999999998755 67889999988754322211   123444444443    566788877888


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      ...+..++-.|||.+ ++...+ .. ...+.+...+++..|++.++.++|+  ..++|+|+||+||++.++. +..++.|
T Consensus       336 ~~~r~~~ip~e~~~~~s~~l~~-~~-~~~~d~~~~~~~~~q~~~~l~~i~s--~~~~~~d~~psni~i~~~~-~~~~~~~  410 (524)
T KOG0601|consen  336 SQLRQGYIPLEFCEGGSSSLRS-VT-SQMLDEDPRLRLTAQILTALNVIHS--KLFVHLDVKPSNILISNDG-FFSKLGD  410 (524)
T ss_pred             cccccccCchhhhcCcchhhhh-HH-HHhcCcchhhhhHHHHHhccccccc--hhhhcccccccceeeccch-hhhhccc
Confidence            877888899999965 333222 11 1337888999999999999999995  5799999999999996543 7789999


Q ss_pred             CCCceecCCcccccccccccc--ChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        260 FGSSCHVGQTLYQYIQSRYYR--SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       260 FG~s~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      ||+.+...-......+.-.+.  +++......+..+.|++|||.-+.+..+|.+.-.
T Consensus       411 ~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~  467 (524)
T KOG0601|consen  411 FGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE  467 (524)
T ss_pred             cccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence            999876433333333333344  5555556678899999999999999999885543

>KOG1243|consensus

Probab=99.30  E-value=4.5e-11  Score=121.67  Aligned_cols=166  Identities=17%  Similarity=0.236  Sum_probs=120.9

Q ss_pred             EEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccCcHHHHHHhcCC
Q psy11727        128 KAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNF  206 (437)
Q Consensus       128 ~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~  206 (437)
                      .|..+.++.+|.|...+.... ......+.+.-++.     ++||+|+++++.++..+++|||+|-+-. |..+++..  
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKt-----lRHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~l--  101 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKT-----LRHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKEL--  101 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhh-----ccCchhhhhhhhhcccCceEEEeecccc-HHHHHHHh--
Confidence            466677888999988875443 11223333333433     4899999999999999999999999842 33344443  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc---ccccccccccChh
Q psy11727        207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYIQSRYYRSPE  283 (437)
Q Consensus       207 ~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~---~~~~gt~~y~aPE  283 (437)
                         +......-+.||+.||.|||.. .+++|++|.-+-|++  +..|..||++|.+++......   ....--..|..|+
T Consensus       102 ---~~~~v~~Gl~qIl~AL~FL~~d-~~lvHgNv~~~SVfV--n~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~  175 (690)
T KOG1243|consen  102 ---GKEEVCLGLFQILAALSFLNDD-CNLVHGNVCKDSVFV--NESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPE  175 (690)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhcc-CCeeeccEeeeeEEE--cCCCcEEEeeeEEEeccccCCcccccchhhhcccChh
Confidence               3556677899999999999874 689999999999999  789999999999886553322   1111223467777


Q ss_pred             hhcCCCCCCcchHHHHHHHHHHHHhC
Q psy11727        284 VLLGIPYDLAIDMWSLGCILVELHTG  309 (437)
Q Consensus       284 ~~~~~~~~~~~DvwSlG~il~elltg  309 (437)
                      .+....  -..|.|-|||+++|++.|
T Consensus       176 ~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  176 EIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             hcCccc--cchhhhhHHHHHHHHhCc
Confidence            653322  457999999999999999

>KOG3087|consensus

Probab=99.26  E-value=1.7e-10  Score=100.27  Aligned_cols=143  Identities=22%  Similarity=0.187  Sum_probs=109.1

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCc---------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ....|-||+-+.|+++.+  .|+.+.||.-..+.         ....+...|..++.++....+..|-+.     |.+..
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~-----~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI-----FIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE-----EEecC
Confidence            567889999999999965  57778887543221         223456679999999988888777554     55667


Q ss_pred             EEEEEEEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCC
Q psy11727        185 HLCLVFELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG  261 (437)
Q Consensus       185 ~~~lV~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG  261 (437)
                      .-+|+|||++|  ++.+++........+......++++|-..+.-||..  +|||+||..+||++.++.+- .+.++|||
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n--diiHGDLTTSNill~~~~~~~~~~lIdfg  161 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN--DIIHGDLTTSNILLRSDGNQITPILIDFG  161 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC--CeecccccccceEEecCCCcCceEEEeec
Confidence            77899999988  788888776544444555578999999999999964  79999999999999654332 35899999


Q ss_pred             Ccee
Q psy11727        262 SSCH  265 (437)
Q Consensus       262 ~s~~  265 (437)
                      ++..
T Consensus       162 ls~~  165 (229)
T KOG3087|consen  162 LSSV  165 (229)
T ss_pred             chhc
Confidence            9843

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.17  E-value=3.6e-10  Score=103.93  Aligned_cols=142  Identities=13%  Similarity=0.120  Sum_probs=100.2

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC---CEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK---NHLCLVF  190 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~---~~~~lV~  190 (437)
                      +.||.|..+.||++.... |..+++|+......  .......|..+++.+....+..|.++   .+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~---~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVL---ALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEE---EECCCCCccCCceEEE
Confidence            568999999999997643 57899999865432  35677889999999876544444444   333332   3678999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP--------------------------------------  231 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~--------------------------------------  231 (437)
                      |+++| ++.+.+..   ..++......++.+++.+|+.||+-                                      
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA  156 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence            99987 45443321   2356667777777777777777742                                      


Q ss_pred             ----------------CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        232 ----------------ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       232 ----------------~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                                      ...++|+|+.|.||+++.+..+.+.|+||+.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                            245799999999999943214568999999874

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=7.8e-10  Score=96.53  Aligned_cols=128  Identities=19%  Similarity=0.193  Sum_probs=93.7

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc---------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ..+++|+-+.++.+...  |..+++|.=..+.         ....+-.+|..++.++...++..|.+.     +.+.+..
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~-----dvD~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVY-----DVDPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEE-----EEcCCCC
Confidence            35789999999999653  4446666533221         112345568889998888887766443     4566778


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .|+|||.+| .|.+.+...         ...++..+-..+.-||.  .||||+||.++||++.   .+.+.++|||++.
T Consensus        75 ~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~--~givHGDLTtsNiIl~---~~~i~~IDfGLg~  139 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHK--AGIVHGDLTTSNIILS---GGRIYFIDFGLGE  139 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHh--cCeecCCCccceEEEe---CCcEEEEECCccc
Confidence            899999998 466676654         14577778888889994  5899999999999994   2339999999985

>KOG2137|consensus

Probab=99.05  E-value=6.3e-11  Score=121.08  Aligned_cols=152  Identities=20%  Similarity=0.316  Sum_probs=111.6

Q ss_pred             HHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC------cccc------ccccccccChhhhcCC
Q psy11727        221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ------TLYQ------YIQSRYYRSPEVLLGI  288 (437)
Q Consensus       221 i~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~------~~~~------~~gt~~y~aPE~~~~~  288 (437)
                      ++.|+.|+|.+ .++||++|.|++|.+  +..+..||+.|+++.....      ..++      ......|.|||++.+.
T Consensus       108 v~dgl~flh~s-Ak~VH~ni~p~~i~~--na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  108 VADGLAFLHRS-AKVVHGNIQPEAIVV--NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             ccchhhhhccC-cceeecccchhheee--ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            34899999985 689999999999999  7889999999998754322      1111      1235679999999998


Q ss_pred             CCCCcchHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceecccccccccc
Q psy11727        289 PYDLAIDMWSLGCILVELH-TGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKER  367 (437)
Q Consensus       289 ~~~~~~DvwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (437)
                      -.+.++|++||||++|.+. .|++.+.+.+.......-....+...                                  
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~----------------------------------  230 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA----------------------------------  230 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccc----------------------------------
Confidence            8889999999999999999 67888877654333222211111000                                  


Q ss_pred             CCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        368 LPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                                               .+.+-+...++++=|.++|..|+.-||++.+++..|||++..
T Consensus       231 -------------------------~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  231 -------------------------FGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             -------------------------ccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence                                     000111112678999999999999999999999999999864

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.00  E-value=2e-08  Score=95.22  Aligned_cols=135  Identities=11%  Similarity=0.047  Sum_probs=96.1

Q ss_pred             EEEEEEcCCCeEEEEEEecCCc------------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCEEEEEEE
Q psy11727        126 VVKAFDHEEKCQVAIKIIKNKK------------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNHLCLVFE  191 (437)
Q Consensus       126 V~~~~~~~~~~~vaiK~i~~~~------------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~~~lV~E  191 (437)
                      |+++.  -.|+.|.||......            .-...+.+|...+..+...++.-|.+|-+...-..  ...-+||||
T Consensus        38 vvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         38 TLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             EEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            45543  356678888653221            00114778999999999888877766544221111  235789999


Q ss_pred             eccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-----CCCCCEEEEeCCCce
Q psy11727        192 LLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-----PKRSAIKIIDFGSSC  264 (437)
Q Consensus       192 ~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-----~~~~~ikL~DFG~s~  264 (437)
                      ++++  +|.+++........+......++.+++..+.-||.  .||+|+|+++.|||+..     ++...+.|+||+.+.
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~--~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA--AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH--CcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9987  68888764322345677888999999999999995  48999999999999963     235679999999874

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.98  E-value=4.9e-09  Score=93.85  Aligned_cols=128  Identities=22%  Similarity=0.283  Sum_probs=79.8

Q ss_pred             EEEEEEEcCCCeEEEEEEecCCc---------------------------ccchHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        125 QVVKAFDHEEKCQVAIKIIKNKK---------------------------PFLNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       125 ~V~~~~~~~~~~~vaiK~i~~~~---------------------------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      .||.|.. .+|..+|||+.+...                           ........|...|.++...++.-|-++   
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~---   76 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPY---   76 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EE---
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEE---
Confidence            4889976 457799999985321                           011234568889988887776656444   


Q ss_pred             ceeeECCEEEEEEEecc--CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-hcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        178 GHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF-LSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~--~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~-LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      ++  .  .-+|||||++  |.....+....   ++......++.+++..+.. +|  ..||||+||.+.|||+.  ++ .
T Consensus        77 ~~--~--~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~--~~givHGDLs~~NIlv~--~~-~  144 (188)
T PF01163_consen   77 DY--N--RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH--KAGIVHGDLSEYNILVD--DG-K  144 (188)
T ss_dssp             EE--E--TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH--CTTEEESS-STTSEEEE--TT-C
T ss_pred             EE--e--CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH--hcCceecCCChhhEEee--cc-e
Confidence            22  1  2369999998  74334344332   2245567788888885555 56  45999999999999994  33 7


Q ss_pred             EEEEeCCCceecCC
Q psy11727        255 IKIIDFGSSCHVGQ  268 (437)
Q Consensus       255 ikL~DFG~s~~~~~  268 (437)
                      +.|+|||.+.....
T Consensus       145 ~~iIDf~qav~~~~  158 (188)
T PF01163_consen  145 VYIIDFGQAVDSSH  158 (188)
T ss_dssp             EEE--GTTEEETTS
T ss_pred             EEEEecCcceecCC
Confidence            99999999876654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741|consensus

Probab=98.92  E-value=5.2e-08  Score=96.90  Aligned_cols=167  Identities=20%  Similarity=0.207  Sum_probs=122.2

Q ss_pred             ceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE----CCEEEEEEEeccC--
Q psy11727        123 FGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW----KNHLCLVFELLSY--  195 (437)
Q Consensus       123 fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~----~~~~~lV~E~~~~--  195 (437)
                      -.+.|+|....+|..|++|++...+ ........-+..++++     .|.|+|++.++|..    +..+++|++|.++  
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-----~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~  363 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-----CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP  363 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-----ccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence            3578999999999999999994222 1222333455666666     78899999999983    4589999999976  


Q ss_pred             cHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        196 NLYNLIRNTN-------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       196 ~L~~~l~~~~-------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +|+++.-...             ..+.++..+|.++.|+..||.++|+.  |+.-+-|.|.+||+  .++..|+|+..|.
T Consensus       364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss--GLAck~L~~~kIlv--~G~~RIriS~C~i  439 (655)
T KOG3741|consen  364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS--GLACKTLDLKKILV--TGKMRIRISGCGI  439 (655)
T ss_pred             hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc--CceeecccHhHeEe--eCcceEEEecccc
Confidence            7888653211             12367899999999999999999965  78889999999999  5565788877776


Q ss_pred             ceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        263 SCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       263 s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      .........           |-+.+   -.+-|.=.||.+++.|.||..-
T Consensus       440 ~Dvl~~d~~-----------~~le~---~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  440 MDVLQEDPT-----------EPLES---QQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             eeeecCCCC-----------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence            543322210           11211   2467999999999999999643

>PRK09902 hypothetical protein; Provisional

Probab=98.77  E-value=2.9e-07  Score=83.18  Aligned_cols=142  Identities=12%  Similarity=0.077  Sum_probs=104.7

Q ss_pred             cccCceEEEEEEEcCCCeEEEEEEecCC-------cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCEEEEE
Q psy11727        119 GKGSFGQVVKAFDHEEKCQVAIKIIKNK-------KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNHLCLV  189 (437)
Q Consensus       119 G~G~fg~V~~~~~~~~~~~vaiK~i~~~-------~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~~~lV  189 (437)
                      |+||.+.|++...  .|..+-+|.-.+.       ......+.+|...++.+...++.-|-++ ..+.-..  .-.-+||
T Consensus        27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            7789999998754  3336778865421       1234578899999999998887666555 2221111  1257899


Q ss_pred             EEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        190 FELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       190 ~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +|-++|  +|.+++........+......+..+++.+++-||.  .|+.|+|+-+.|||+..++...|+++||.-+..
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~--~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS--VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            999985  78888877554456788888999999999999995  589999999999999533333499999997743

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.69  E-value=2.5e-07  Score=90.03  Aligned_cols=189  Identities=16%  Similarity=0.199  Sum_probs=125.0

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEE--------ecceeeECCE
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK--------LKGHFTWKNH  185 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~--------l~~~~~~~~~  185 (437)
                      ..+.||+|+-+.+|-.-.   -.-.+.|+......-...     +..+.+.. ...||-+-.        ++|- .....
T Consensus        15 ~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~a-----qk~a~la~-~p~~p~~~~rvaWPqa~L~G~-~~~~~   84 (637)
T COG4248          15 PGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQA-----QKVAELAA-TPDAPLLNYRVAWPQATLHGG-RRGKV   84 (637)
T ss_pred             CCccccCCccceeeecch---hhchhheeecCCCchHHH-----HHHHHhcc-CCCCcchhhhhcccHHHhhCC-Cccce
Confidence            456789999999996632   222445776533221111     11122211 124442111        1111 11223


Q ss_pred             EEEEEEeccC--cHHHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        186 LCLVFELLSY--NLYNLIR----NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       186 ~~lV~E~~~~--~L~~~l~----~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      .-++|..++|  ...+++.    .+.+.-..|+...+.++.|+.+.+-||.+  |.+-+|+.++|+|+  .+.+.+.|+|
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~--Gh~vGDVn~~~~lV--sd~~~V~LVd  160 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH--GHVVGDVNQNSFLV--SDDSKVVLVD  160 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc--CCcccccCccceee--ecCceEEEEc
Confidence            6788888866  4555442    33444578999999999999999999965  89999999999999  5677788887


Q ss_pred             CCCceec--CCccccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhC-CCCCCCC
Q psy11727        260 FGSSCHV--GQTLYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTG-EPLFSGK  316 (437)
Q Consensus       260 FG~s~~~--~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg-~~pf~~~  316 (437)
                      =.+=...  +......+|+..|.+||...     +.+-+...|.|.||+++++++.| +.||+|.
T Consensus       161 sDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         161 SDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            5542211  22233567899999999876     34556789999999999999986 9999884

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.66  E-value=4.6e-07  Score=82.79  Aligned_cols=113  Identities=21%  Similarity=0.224  Sum_probs=85.1

Q ss_pred             chHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-CCEEEEEEEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q psy11727        150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-KNHLCLVFELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA  226 (437)
Q Consensus       150 ~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-~~~~~lV~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~  226 (437)
                      ..+..+|...+..+...++.-|-.|-+...-.. ....+||+|.+++  +|.+++.....  .+......++.+++..++
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence            456788999999998888776655544322111 1356899999977  68888876432  567788899999999999


Q ss_pred             HhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCCCceec
Q psy11727        227 FLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGSSCHV  266 (437)
Q Consensus       227 ~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG~s~~~  266 (437)
                      -||.  .||+|+|+++.|||+..++ ...+.|+||+.+...
T Consensus       133 ~lH~--~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  133 KLHD--AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHH--CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9995  4899999999999995432 237999999987543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.63  E-value=1.9e-07  Score=86.46  Aligned_cols=138  Identities=22%  Similarity=0.274  Sum_probs=91.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-------------------c----cchHHHHHHHHHHHhhhcCC
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------------------P----FLNQAQIEVQLLEKINKADI  168 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-------------------~----~~~~~~~e~~~~~~l~~~~~  168 (437)
                      +.+.+.||-|.-+.||.|.+. .|..+|||.-+...                   .    ....+++|..+|..+...+.
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            556789999999999999876 67899999753211                   0    11235568888888764422


Q ss_pred             CCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      .   +.+.++    .+..++|||+..| .|+..-.       +......++..|+.-+.-..  ..||||+|+.+-||++
T Consensus       172 ~---VP~P~~----~nRHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~--~~GiVHGDlSefNIlV  235 (304)
T COG0478         172 K---VPKPIA----WNRHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAY--RRGIVHGDLSEFNILV  235 (304)
T ss_pred             C---CCCccc----cccceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHH--HcCccccCCchheEEE
Confidence            2   222222    3667899999988 4443321       22333444444554444443  3589999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCC
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~  268 (437)
                        +++|.+.++||--+...+.
T Consensus       236 --~~dg~~~vIDwPQ~v~~~h  254 (304)
T COG0478         236 --TEDGDIVVIDWPQAVPISH  254 (304)
T ss_pred             --ecCCCEEEEeCcccccCCC
Confidence              6687899999987655443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.58  E-value=4e-07  Score=93.46  Aligned_cols=144  Identities=17%  Similarity=0.234  Sum_probs=89.2

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc-----------------------------------ccchH------HH
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----------------------------------PFLNQ------AQ  154 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-----------------------------------~~~~~------~~  154 (437)
                      +.|+.++-|+||+|+.+. |+.||||+.+..-                                   ...+.      +.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            678999999999998754 9999999975320                                   00011      12


Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHH--HHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy11727        155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP  231 (437)
Q Consensus       155 ~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~--l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~  231 (437)
                      +|..-++++...--..+++.--.=+++....-.|+|||+.| .+.+.  ++..   +++...+.....++.--.-+-|  
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d~k~ia~~~~~~f~~q~~~d--  284 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GIDRKELAELLVRAFLRQLLRD--  284 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCCHHHHHHHHHHHHHHHHHhc--
Confidence            35555555544322344333222233445667899999988 56665  3443   3443222222222111111222  


Q ss_pred             CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       232 ~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                        |++|+|..|-||++  +.+|.+.+.|||+....+..
T Consensus       285 --gffHaDpHpGNi~v--~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         285 --GFFHADPHPGNILV--RSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             --CccccCCCccceEE--ecCCcEEEEcCcceecCCHH
Confidence              79999999999999  67789999999998776543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.54  E-value=1e-06  Score=80.90  Aligned_cols=138  Identities=19%  Similarity=0.215  Sum_probs=93.7

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEecCCccc-------------------------chHHHHHHHHHHHhhhcCCCCC
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-------------------------LNQAQIEVQLLEKINKADIHSR  171 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------------------------~~~~~~e~~~~~~l~~~~~~h~  171 (437)
                      .|..|.-+.||+|.. .++..+|+|+.+.....                         ......|..-|.++..+++..|
T Consensus        55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP  133 (268)
T COG1718          55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP  133 (268)
T ss_pred             eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            567788889999964 56789999998643211                         1122347777777777666555


Q ss_pred             cEEEecceeeECCEEEEEEEeccCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~~--L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      -   -+.+    ..-.|||||++..  -.-.|+..   ++....+..+..++++.+.-|.. ..|+||+||+.-|||+  
T Consensus       134 ~---Pi~~----~~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~-~a~LVHgDLSEyNiL~--  200 (268)
T COG1718         134 E---PIAF----RNNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYK-EAGLVHGDLSEYNILV--  200 (268)
T ss_pred             C---ceee----cCCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHH-hcCcccccchhhheEE--
Confidence            2   1111    2236999999764  11122222   23444688888889998888874 3689999999999999  


Q ss_pred             CCCCCEEEEeCCCceecCCc
Q psy11727        250 PKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~~  269 (437)
                      . ++.+.|||||-|.....+
T Consensus       201 ~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         201 H-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             E-CCeEEEEECccccccCCC
Confidence            3 667999999999766544

>KOG0576|consensus

Probab=98.43  E-value=3.9e-08  Score=99.98  Aligned_cols=185  Identities=19%  Similarity=0.155  Sum_probs=134.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCc-EEEecceeeECCEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~-iv~l~~~~~~~~~~~lV  189 (437)
                      .|....-+++|+++++++.+...+...+ .+.+...    .....++.++.+.     .||| .+..++-++.+++..++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~-----n~P~~~v~~~~d~~~E~~~~i~  312 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV-----NNPNPVVRYLEDYDGEDYLWIP  312 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc-----cCCCCcccccccCCcccccchh
Confidence            3555666799999999999887776555 6766532    3444567777776     4555 77777777888899999


Q ss_pred             EEeccCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        190 FELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       190 ~E~~~~~--L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |++++++  ........ ...+..-....+.+.-+.++++||+-  -=+|+|    ||+.+   ++..+..||+....+.
T Consensus       313 ~~i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~--~~~~~d----~~l~s---~~~~~~~~~~v~~~L~  382 (829)
T KOG0576|consen  313 MRICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSS--YKVHRD----NILGS---EEEVKLLDFAVPPQLT  382 (829)
T ss_pred             hhhhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccc--cccCcc----ccccc---ccccccccccCCcccC
Confidence            9999764  22111111 01133334445666677889999953  238888    88874   3568999999987775


Q ss_pred             Cc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        268 QT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       268 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ..  ..+..+++.++|||+.....+....|+||+|+-..+|--|-+|-..
T Consensus       383 ~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  383 RTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             cccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            55  5567899999999999999999999999999877788778887765

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.43  E-value=5.1e-06  Score=76.64  Aligned_cols=82  Identities=12%  Similarity=0.153  Sum_probs=57.0

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEecc
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS  194 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~  194 (437)
                      ++.|+.|..+.||++....  ..+++|..... ........|..+++.+....+.-|-++............+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            4678999999999997654  48999998643 34567778999999998776633444432222234456899999998


Q ss_pred             C-cHHH
Q psy11727        195 Y-NLYN  199 (437)
Q Consensus       195 ~-~L~~  199 (437)
                      | .+..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            7 4444

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.39  E-value=1.1e-05  Score=72.89  Aligned_cols=133  Identities=17%  Similarity=0.300  Sum_probs=97.6

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCc-----------------ccchHHHHHHHHHHHhh-hcCCCCCcEEEe
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----------------PFLNQAQIEVQLLEKIN-KADIHSRYIVKL  176 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-----------------~~~~~~~~e~~~~~~l~-~~~~~h~~iv~l  176 (437)
                      ...||+|+.-.||.-   ..+...+||+.....                 ...++..+|+.....+. ..+..+.+|.++
T Consensus         6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CcccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            356899999988865   445568899987544                 23567778888888888 778888899999


Q ss_pred             cceeeECCEEEEEEEecc---C----cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        177 KGHFTWKNHLCLVFELLS---Y----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~---~----~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      +|+.+++.-+-+|+|...   |    +|.+++....   ++. .....+.++.   .||-.  .+|+.+||+|.||++..
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~~L~~f~---~~l~~--~~Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQALDEFK---RYLLD--HHIVIRDLNPHNIVVQR  153 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHHHHHHHH---HHHHH--cCCeecCCCcccEEEEe
Confidence            999999999999999872   2    5777775543   555 4444444444   44443  25999999999999976


Q ss_pred             CCCCC--EEEEe
Q psy11727        250 PKRSA--IKIID  259 (437)
Q Consensus       250 ~~~~~--ikL~D  259 (437)
                      ..++.  +.|+|
T Consensus       154 ~~~~~~~lvlID  165 (199)
T PF10707_consen  154 RDSGEFRLVLID  165 (199)
T ss_pred             cCCCceEEEEEe
Confidence            65554  67777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.36  E-value=4.8e-06  Score=75.67  Aligned_cols=140  Identities=17%  Similarity=0.229  Sum_probs=90.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc----------hHHHHHHHHHHHhhhcCCCC---CcEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----------NQAQIEVQLLEKINKADIHS---RYIV  174 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----------~~~~~e~~~~~~l~~~~~~h---~~iv  174 (437)
                      +.++|.+.+++-......|.+..  -+|+.+++|..+......          ....+.+..+..+...++..   +.++
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            35678888888887777777764  467789999886532211          12223444444444333332   2444


Q ss_pred             EecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       175 ~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                      -..-.+......+|||||++| .|.+...      +++    .+...|..++.-||.  .|+.|+|..|.|+++.  + +
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~--~G~~HGD~hpgNFlv~--~-~  171 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHK--HGFYHGDPHPGNFLVS--N-N  171 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHH--cCCccCCCCcCcEEEE--C-C
Confidence            444444444667899999988 5554421      222    244567778899995  5999999999999994  3 3


Q ss_pred             CEEEEeCCCce
Q psy11727        254 AIKIIDFGSSC  264 (437)
Q Consensus       254 ~ikL~DFG~s~  264 (437)
                      .++++||+...
T Consensus       172 ~i~iID~~~k~  182 (229)
T PF06176_consen  172 GIRIIDTQGKR  182 (229)
T ss_pred             cEEEEECcccc
Confidence            49999998754

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235|consensus

Probab=98.28  E-value=1.2e-05  Score=82.54  Aligned_cols=145  Identities=17%  Similarity=0.176  Sum_probs=88.3

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCc--------------------------------ccchH------HHHH
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--------------------------------PFLNQ------AQIE  156 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--------------------------------~~~~~------~~~e  156 (437)
                      .+.||.-+.|+|++|+.+. |+.||||+-+..-                                ...+.      +..|
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            3578999999999998765 9999999864210                                00111      1123


Q ss_pred             HHHHHHhhhcCCCCCc------EEEecceeeECCEEEEEEEeccC---cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy11727        157 VQLLEKINKADIHSRY------IVKLKGHFTWKNHLCLVFELLSY---NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF  227 (437)
Q Consensus       157 ~~~~~~l~~~~~~h~~------iv~l~~~~~~~~~~~lV~E~~~~---~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~  227 (437)
                      .+-.++... +..|..      |.+++-.  ......|+||||+|   +-.+.+.+.+   ++...+..-+.+...-+-+
T Consensus       245 A~Nae~~~~-~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~qIf  318 (538)
T KOG1235|consen  245 AKNAERFRE-NFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLEQIF  318 (538)
T ss_pred             HHhHHHHHH-HHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHHHHH
Confidence            333333221 112222      3344322  23467899999987   3335555543   5665444444443332333


Q ss_pred             hcCCCCCeeeCCCCCCcEEEecC--CCCCEEEEeCCCceecCCcc
Q psy11727        228 LSSPELSIIHCDLKPENILLCSP--KRSAIKIIDFGSSCHVGQTL  270 (437)
Q Consensus       228 LH~~~~giiHrDiKp~NIll~~~--~~~~ikL~DFG~s~~~~~~~  270 (437)
                      .|    |++|+|-.|-||++..+  .++.+.+-|||+........
T Consensus       319 ~~----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~  359 (538)
T KOG1235|consen  319 KT----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT  359 (538)
T ss_pred             hc----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence            33    79999999999999643  46779999999987776543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.24  E-value=3.5e-05  Score=71.38  Aligned_cols=72  Identities=17%  Similarity=0.103  Sum_probs=52.6

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      ..||+|..+.||+.    .+..+++|..... .......+|..++..+...++..|-+   +.+..+.+...+|||+++|
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~-~~~~~i~~E~~~l~~l~~~glpvP~~---~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPG-FDKETIKREFDASRKVFSLGIPTPHP---FDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHcCCCCCce---EEEEecCCeeeeeeeecCC
Confidence            56899999999984    2446788987642 23456788999999988766655544   4445566778899999987

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.08  E-value=5.8e-05  Score=70.66  Aligned_cols=70  Identities=10%  Similarity=0.032  Sum_probs=48.4

Q ss_pred             ecccCc-eEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        118 LGKGSF-GQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       118 lG~G~f-g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      |-.|.. ..||++..  .+..+.+|+.....  ......|..++..+... +.   +.+++++....+..++|||+++|
T Consensus         6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-~~---vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP--TYELEREAERLRWLAGK-LP---VPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             cCCCCCcCeEEEEcC--CCCcEEEEecCCCc--ccchHHHHHHHHHHHhc-CC---CCeEEEEEecCCccEEEEEeeCC
Confidence            445555 78899854  34678888875432  34577899999888754 33   44555666666678999999987

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.04  E-value=4.4e-05  Score=71.13  Aligned_cols=74  Identities=8%  Similarity=0.025  Sum_probs=45.0

Q ss_pred             ceecccCce-EEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc-CCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        116 TLLGKGSFG-QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       116 ~~lG~G~fg-~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      +.|+.|+.. .||+.     +..+++|+... .........|..++..+... .+..|-++..-..-......++||+++
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            456777776 48876     12477787653 22345788899999988753 445554433211111112458899998


Q ss_pred             cC
Q psy11727        194 SY  195 (437)
Q Consensus       194 ~~  195 (437)
                      +|
T Consensus        77 ~G   78 (235)
T cd05155          77 EG   78 (235)
T ss_pred             cC
Confidence            77

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.03  E-value=0.00011  Score=66.19  Aligned_cols=129  Identities=24%  Similarity=0.342  Sum_probs=91.9

Q ss_pred             cCeeeeceecccCc-eEEEEEEEcCCCeEEEEEEecC---C------------c-------ccchHHHHHHHHHHHhhhc
Q psy11727        110 DRYEIDTLLGKGSF-GQVVKAFDHEEKCQVAIKIIKN---K------------K-------PFLNQAQIEVQLLEKINKA  166 (437)
Q Consensus       110 ~~y~i~~~lG~G~f-g~V~~~~~~~~~~~vaiK~i~~---~------------~-------~~~~~~~~e~~~~~~l~~~  166 (437)
                      .+++.++.||.|+- |.||++.-  +|..+|+|+++.   .            .       .....+..|.....++...
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67889999999999 99999964  677999999431   0            0       2234556788888888766


Q ss_pred             CCCCCcEEEecceeeEC------------------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh
Q psy11727        167 DIHSRYIVKLKGHFTWK------------------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL  228 (437)
Q Consensus       167 ~~~h~~iv~l~~~~~~~------------------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~L  228 (437)
                      +-.+-.-|+++|+..-.                  -...||.||++..-          .++.    .=+.+|..-+..+
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~~~dl~~~  180 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQMLRDLKIL  180 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHHHHHHHHH
Confidence            54343459999987422                  13567888776532          1233    3345666777888


Q ss_pred             cCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       229 H~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      |  ..||+-+|+++.|..     +|  +|+|||.+
T Consensus       181 ~--k~gI~~~Dv~~~ny~-----~G--~lvDfs~~  206 (207)
T PF13095_consen  181 H--KLGIVPRDVKPRNYR-----GG--KLVDFSSS  206 (207)
T ss_pred             H--HCCeeeccCcccccc-----CC--EEEecccC
Confidence            9  579999999999987     22  89999975

>PLN02876 acyl-CoA dehydrogenase

Probab=97.95  E-value=0.00015  Score=79.86  Aligned_cols=79  Identities=14%  Similarity=0.066  Sum_probs=52.5

Q ss_pred             eceecccCceEEEEEEEcCCC--eEEEEEEecCCc--ccchHHHHHHHHHHHhh-hcCCCCCcEEEecceeeEC---CEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEK--CQVAIKIIKNKK--PFLNQAQIEVQLLEKIN-KADIHSRYIVKLKGHFTWK---NHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~--~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~-~~~~~h~~iv~l~~~~~~~---~~~  186 (437)
                      .+.++.|.+..+|+......+  ..+++|+.....  .......+|..+++.+. +.++..   .+++.++.+.   +..
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpV---P~v~~~~~d~~v~G~~  119 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPV---PKVYCLCTDASVIGTA  119 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCC---CcEEEEecCCCcCCCc
Confidence            567799999999998764432  357777754322  12246778999999986 344433   4445555543   467


Q ss_pred             EEEEEeccCc
Q psy11727        187 CLVFELLSYN  196 (437)
Q Consensus       187 ~lV~E~~~~~  196 (437)
                      |+|||+++|.
T Consensus       120 flVME~v~G~  129 (822)
T PLN02876        120 FYIMEYLEGR  129 (822)
T ss_pred             eEEEEecCCc
Confidence            8999999773

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.88  E-value=0.00034  Score=64.99  Aligned_cols=73  Identities=18%  Similarity=0.307  Sum_probs=48.0

Q ss_pred             eceecccCceEEEEEEEcC-CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        115 DTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      ++.|..|-...+|++.... .+..|++|+........-....|..++..+...++ .|-+   +..+.  +  .+||||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl-~P~v---~~~~~--~--~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL-APKL---YATFQ--N--GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC-CCeE---EEEeC--C--cEEEEee
Confidence            3567778888999996543 35678899876443333344578999998877665 3433   33322  2  3799999


Q ss_pred             cC
Q psy11727        194 SY  195 (437)
Q Consensus       194 ~~  195 (437)
                      +|
T Consensus        75 ~G   76 (235)
T cd05157          75 PG   76 (235)
T ss_pred             CC
Confidence            76

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2270|consensus

Probab=97.78  E-value=0.00021  Score=69.21  Aligned_cols=141  Identities=25%  Similarity=0.315  Sum_probs=103.8

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCc---------------------------ccchHHHHHHHHHHHhhhc
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------------------------PFLNQAQIEVQLLEKINKA  166 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---------------------------~~~~~~~~e~~~~~~l~~~  166 (437)
                      +..+|..|.-+.||.|.. .+|..+|||+.+..-                           -..-.+..|+.-+.+++.+
T Consensus       148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            456788899999999974 567789999985320                           0012344588888889888


Q ss_pred             CCCCCcEEEecceeeECCEEEEEEEeccCc--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       167 ~~~h~~iv~l~~~~~~~~~~~lV~E~~~~~--L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      ++.+|--+-|.       .-.|||+|++.+  -.-.|+..   .++...+..+-.|++.-+.-|.. .+++||.||.=-|
T Consensus       227 GIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~-~c~LVHADLSEfN  295 (520)
T KOG2270|consen  227 GIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQ-KCRLVHADLSEFN  295 (520)
T ss_pred             CCCCCCceeee-------cceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHH-Hhceeccchhhhh
Confidence            88887443332       236899999763  22234433   37888899999999999988875 4689999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCc
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      +|+   .+|.+.|+|.+-|.....+
T Consensus       296 ~Ly---hdG~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  296 LLY---HDGKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             heE---ECCEEEEEEccccccCCCh
Confidence            999   5678999999988766443

>PRK05231 homoserine kinase; Provisional

Probab=97.74  E-value=0.0009  Score=65.27  Aligned_cols=77  Identities=5%  Similarity=0.013  Sum_probs=51.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc---eeeECCEEEEEEEe
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG---HFTWKNHLCLVFEL  192 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~---~~~~~~~~~lV~E~  192 (437)
                      +.|+.|...++|+.... +| .+++|+..  .........|..+++.+...++..|.++.-.+   +....+..++++++
T Consensus        28 ~~l~~G~~n~~y~v~t~-~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTT-QG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeC-CC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            45667777899998643 33 68899875  22234556678888888877766665554221   12345678999999


Q ss_pred             ccCc
Q psy11727        193 LSYN  196 (437)
Q Consensus       193 ~~~~  196 (437)
                      ++|.
T Consensus       104 l~G~  107 (319)
T PRK05231        104 LEGK  107 (319)
T ss_pred             cCCC
Confidence            9773

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=0.00025  Score=61.98  Aligned_cols=131  Identities=19%  Similarity=0.186  Sum_probs=82.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE  191 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E  191 (437)
                      -.+.+.||+|.+|.||+|.+  .|..+|+|+-+ .......+..|..+++.+....+..    +++.+    +.-++.||
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~p----~vy~y----g~~~i~me   92 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEW--RGGEVALKVRR-RDSPRRNLEKEAKILEILAGEGVTP----EVYFY----GEDFIRME   92 (201)
T ss_pred             hhhhhhhhcccccEEEEeec--cCceEEEEEec-CCcchhhHHHHHHHHHHhhhcCCCc----eEEEe----chhhhhhh
Confidence            34567899999999999975  45689999876 3444567788999999987665432    33332    22345599


Q ss_pred             eccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCC-CCcEEEecCCCCCEEEEeCCCceec
Q psy11727        192 LLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLK-PENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       192 ~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiK-p~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      |+.| .|.++....     .-..+    ..++.+ +|.=+ .+||-|..|. |..+++.  ++..+.|+||..|+..
T Consensus        93 ~i~G~~L~~~~~~~-----~rk~l----~~vlE~-a~~LD-~~GI~H~El~~~~k~vlv--~~~~~~iIDFd~At~k  156 (201)
T COG2112          93 YIDGRPLGKLEIGG-----DRKHL----LRVLEK-AYKLD-RLGIEHGELSRPWKNVLV--NDRDVYIIDFDSATFK  156 (201)
T ss_pred             hhcCcchhhhhhcc-----cHHHH----HHHHHH-HHHHH-HhccchhhhcCCceeEEe--cCCcEEEEEccchhhc
Confidence            9988 776654321     11222    223333 22222 4578787775 4444443  2336999999999743

>PRK10593 hypothetical protein; Provisional

Probab=97.69  E-value=0.00089  Score=64.74  Aligned_cols=79  Identities=11%  Similarity=0.061  Sum_probs=52.3

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcC-CCCCcEEEecceeeECCEEEEEEEe
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD-IHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~-~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      -.+.||.|..+.||...... + .+.+|..+. ......+..|...++.+.... +..|-++.+.......+..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQ-G-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCC-C-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            35678999999999985432 3 467777542 123457888999999997643 4444444332222334678999999


Q ss_pred             ccC
Q psy11727        193 LSY  195 (437)
Q Consensus       193 ~~~  195 (437)
                      +.|
T Consensus        95 i~G   97 (297)
T PRK10593         95 LRG   97 (297)
T ss_pred             cCC
Confidence            976

>KOG1035|consensus

Probab=97.59  E-value=9.5e-05  Score=80.63  Aligned_cols=189  Identities=21%  Similarity=0.237  Sum_probs=122.0

Q ss_pred             CCCCCcEEEecceeeECCEEE----EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCC
Q psy11727        167 DIHSRYIVKLKGHFTWKNHLC----LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLK  241 (437)
Q Consensus       167 ~~~h~~iv~l~~~~~~~~~~~----lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiK  241 (437)
                      .+.|+|++.++.+-......-    +..+++++ .+...+....  .++....+.+..++..+|+|+|+..++  |.-+.
T Consensus       238 k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~~~l~--~v~L~  313 (1351)
T KOG1035|consen  238 KIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHSLSLE--HVVLS  313 (1351)
T ss_pred             hhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHHhccc--eeEEe
Confidence            347788888777655443332    33456655 6666666553  478899999999999999999975322  22111


Q ss_pred             CC---cEEEecCCCCCEEEE--eCCCceecCCcccc--ccccccccChhhhcCCCCCCc--chHHHHHHHHHHHHhCCCC
Q psy11727        242 PE---NILLCSPKRSAIKII--DFGSSCHVGQTLYQ--YIQSRYYRSPEVLLGIPYDLA--IDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       242 p~---NIll~~~~~~~ikL~--DFG~s~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~--~DvwSlG~il~elltg~~p  312 (437)
                      ..   +.-.  +..+.+.++  ||+.+.........  ...+..+.++|......++.+  .|+|.+|..+.-+..|..+
T Consensus       314 ~s~~~~~~~--~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i  391 (1351)
T KOG1035|consen  314 ASSSKESTV--DGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDI  391 (1351)
T ss_pred             ccccccccc--CccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcc
Confidence            11   1111  344556666  88888776554332  334566888888877665544  7999999999999887644


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      -.-..   .....+.           ..          .                                         
T Consensus       392 ~~~~~---~~~~~l~-----------~~----------~-----------------------------------------  406 (1351)
T KOG1035|consen  392 SEKSA---VPVSLLD-----------VL----------S-----------------------------------------  406 (1351)
T ss_pred             ccccc---chhhhhc-----------cc----------c-----------------------------------------
Confidence            32110   0111100           00          0                                         


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                          .   ....+++.+|+.-++++|+++.+++.|||+.-.
T Consensus       407 ----~---~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  407 ----T---SELLDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             ----c---hhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence                0   024689999999999999999999999998653

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.59  E-value=0.00082  Score=65.27  Aligned_cols=145  Identities=17%  Similarity=0.210  Sum_probs=83.0

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc---eeeECCEEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG---HFTWKNHLCLVFE  191 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~---~~~~~~~~~lV~E  191 (437)
                      .+.++.|....+|++.. .++ .+++|+.... ........|..+++.+...++..|-++...+   .....+..++|++
T Consensus        27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEe-CCC-cEEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            45667777789998853 334 5778987532 1234566788888888776665554444322   1123567899999


Q ss_pred             eccCc-H-----H------HH---HHh--cCCCC-----CCHHH-----HH----------HHHHHHHHHHHHhcC----
Q psy11727        192 LLSYN-L-----Y------NL---IRN--TNFHG-----VSLNL-----TK----------KFAQQLCCALAFLSS----  230 (437)
Q Consensus       192 ~~~~~-L-----~------~~---l~~--~~~~~-----ls~~~-----~~----------~i~~qi~~aL~~LH~----  230 (437)
                      +++|. +     .      ..   +..  ..+..     .....     ..          .....+...++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            98762 1     0      11   111  11100     00000     00          011122334444421    


Q ss_pred             -CCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        231 -PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       231 -~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                       ...++||+|+.+.||++.  +++.+.|+||+.+.
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~--~~~~~~vIDfd~~~  216 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFD--GDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCccCCCCCCcCcEEEE--CCceEEEeeccccc
Confidence             236899999999999994  45556899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.59  E-value=0.00072  Score=65.18  Aligned_cols=145  Identities=16%  Similarity=0.176  Sum_probs=83.6

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEec-c--eeeECCEEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK-G--HFTWKNHLCLVFE  191 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~-~--~~~~~~~~~lV~E  191 (437)
                      .+.|..|....+|++..  ++..+++|+...  ........|..+++.+...++.-|-++... +  +....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            45677788889999854  334688998764  233566778999999877665444333321 1  1234567789999


Q ss_pred             eccC-cHH-----------HHH---Hh--cCCCC-----CCHHHHHH------------HHHHHHHHHHHhcC-----CC
Q psy11727        192 LLSY-NLY-----------NLI---RN--TNFHG-----VSLNLTKK------------FAQQLCCALAFLSS-----PE  232 (437)
Q Consensus       192 ~~~~-~L~-----------~~l---~~--~~~~~-----ls~~~~~~------------i~~qi~~aL~~LH~-----~~  232 (437)
                      +++| .+.           ..+   ..  ..+..     ........            ....+..++.++..     ..
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            9976 221           111   11  01100     00000000            11112233444332     13


Q ss_pred             CCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      .++||+|+.|.||++  ++++.+.|+||+.++.
T Consensus       175 ~~l~HgD~~~~Nil~--~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLF--DGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEE--eCCceEEEeehhhhcC
Confidence            479999999999999  4555568999998743

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1093|consensus

Probab=97.55  E-value=0.00015  Score=73.04  Aligned_cols=161  Identities=20%  Similarity=0.250  Sum_probs=100.6

Q ss_pred             CCCCcEEEecceeeE-CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        168 IHSRYIVKLKGHFTW-KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~-~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      +.|++....+++-.. .....+|||++..+|++.+........+.-               -|    |+.|     -||+
T Consensus        39 l~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~l~~~s~~---------------~~----~~~~-----~~~~   94 (725)
T KOG1093|consen   39 LQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGNLKDESLL---------------AH----GVLH-----LNII   94 (725)
T ss_pred             hcCccceeeEeeecCccceEEEEehhhccchHHHHHhcccchhhhc---------------cc----ccce-----ehhh
Confidence            367777777766543 346899999999999998876542111110               11    2222     2222


Q ss_pred             EecCCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                               +.+| .++...    .+.+                .+++||||+|.++.++..|...+....+.+....+.
T Consensus        95 ---------~~td-~~~t~~----~~~~----------------~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~  144 (725)
T KOG1093|consen   95 ---------YITD-HFLTKY----PSPI----------------GPKSDVWSLGFIILELYLGISLEAELTESEYLEILL  144 (725)
T ss_pred             ---------hccc-cccccC----CCCC----------------CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence                     3333 111000    1111                149999999999999999999998888877777776


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      +....+.....-....                                  ++                 ..+....+.++
T Consensus       145 k~~~~d~~~~~~a~e~----------------------------------~~-----------------~~~~d~~~~~~  173 (725)
T KOG1093|consen  145 KYYTDDQELLSTAMEH----------------------------------LI-----------------QLLADKKRLPL  173 (725)
T ss_pred             HhccCchhHHHHHHHH----------------------------------HH-----------------HHhhhHhHHHH
Confidence            6443332211110000                                  00                 01122367899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +.+|+-..|..||.+.++.+|+-|++.
T Consensus       174 ~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  174 LKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             hccCCccccccccchhHHhcCccHHHH
Confidence            999999999999999999999998764

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.52  E-value=0.00089  Score=63.17  Aligned_cols=134  Identities=16%  Similarity=0.150  Sum_probs=75.1

Q ss_pred             ecccCceEEEEEEEcCCCeEEEEEEecCCcccc-hHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-
Q psy11727        118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL-NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-  195 (437)
Q Consensus       118 lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~-~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-  195 (437)
                      +..|-.+.+|+..  .++..+++|+........ -....|..+++.+...++ .|.++..   .  .  -++||||++| 
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i~~---~--~--~~~v~e~i~G~   73 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPILV---N--E--HWLLVEWLEGE   73 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceEEE---e--C--CEEEEEeccCc
Confidence            4567778899886  456678888765332221 235779999999887654 3544432   1  2  2689999977 


Q ss_pred             cHH--------------HHHH---hcCC--CCCCH-HHHHHHHHHH---------HHHHHHhcC------CCCCeeeCCC
Q psy11727        196 NLY--------------NLIR---NTNF--HGVSL-NLTKKFAQQL---------CCALAFLSS------PELSIIHCDL  240 (437)
Q Consensus       196 ~L~--------------~~l~---~~~~--~~ls~-~~~~~i~~qi---------~~aL~~LH~------~~~giiHrDi  240 (437)
                      .+.              +.+.   ....  ..++. ..+..+..++         ...+..+-.      ....++|+|+
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl  153 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV  153 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence            321              1111   1111  11111 1111221111         111211111      1235899999


Q ss_pred             CCCcEEEecCCCCCEEEEeCCCce
Q psy11727        241 KPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       241 Kp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .|.||+++  +++ +.|+||+.|.
T Consensus       154 ~~~Nil~~--~~~-~~lIDwE~a~  174 (256)
T TIGR02721       154 HAYNLVVT--PQG-LKLIDWEYAS  174 (256)
T ss_pred             CcCcEEEe--CCC-CEEEeccccC
Confidence            99999994  444 7899999874

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.47  E-value=0.0032  Score=63.11  Aligned_cols=77  Identities=23%  Similarity=0.170  Sum_probs=52.9

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCC--------cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--------KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--------~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.||.|.+..||++.+...++.++||.-...        .....+...|...+..+...  ...++.+++.+  +.+..
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~--~p~~VPkV~~~--D~~~~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKY--VPDLVPKVYHY--DEELA  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhh--CCCCCCeEEEE--CCCCC
Confidence            35689999999999988654468999974311        12345677788888876542  22346666654  44667


Q ss_pred             EEEEEeccC
Q psy11727        187 CLVFELLSY  195 (437)
Q Consensus       187 ~lV~E~~~~  195 (437)
                      ++|||++++
T Consensus       107 ~lVME~L~~  115 (401)
T PRK09550        107 VTVMEDLSD  115 (401)
T ss_pred             EEEEecCCC
Confidence            899999965

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.43  E-value=0.0022  Score=62.07  Aligned_cols=72  Identities=14%  Similarity=0.209  Sum_probs=46.8

Q ss_pred             ceecccCceEEEEEEEcC------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHE------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +.|..|-...||++....      +++.+++|+.............|..++..+...++ .|.+   +..+..    .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-~P~~---~~~~~~----~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-GPKL---YGIFPN----GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-CCce---EEEeCC----Cch
Confidence            445666667888886433      25789999986544444566789999999887664 3433   333332    258


Q ss_pred             EEeccC
Q psy11727        190 FELLSY  195 (437)
Q Consensus       190 ~E~~~~  195 (437)
                      +||++|
T Consensus        76 ~e~i~G   81 (302)
T cd05156          76 EEFIPS   81 (302)
T ss_pred             hheeCC
Confidence            898866

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2268|consensus

Probab=97.19  E-value=0.00045  Score=65.99  Aligned_cols=136  Identities=19%  Similarity=0.252  Sum_probs=91.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----------c---------cc--c--hHHHHHHHHHHHhhhcC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----------K---------PF--L--NQAQIEVQLLEKINKAD  167 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----------~---------~~--~--~~~~~e~~~~~~l~~~~  167 (437)
                      -+.+.+.||-|.-+.||.+-+. .|...++|+-+..          .         .+  .  -.+..|...++.+...+
T Consensus        93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3778999999999999999764 5778888864211          1         01  1  12446888888887655


Q ss_pred             CCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      ..-|   +.+    +.+..|+|||++.| .|.+.-.-.        .+..+...+..-+.-|..  .|+||||..-=||+
T Consensus       172 fpVP---kpi----D~~RH~Vvmelv~g~Pl~~v~~v~--------d~~~ly~~lm~~Iv~la~--~GlIHgDFNEFNim  234 (465)
T KOG2268|consen  172 FPVP---KPI----DHNRHCVVMELVDGYPLRQVRHVE--------DPPTLYDDLMGLIVRLAN--HGLIHGDFNEFNIM  234 (465)
T ss_pred             CCCC---Ccc----cccceeeHHHhhcccceeeeeecC--------ChHHHHHHHHHHHHHHHH--cCceecccchheeE
Confidence            4433   322    34667899999977 666543221        223444555555555653  48999999999999


Q ss_pred             EecCCCCCEEEEeCCCceec
Q psy11727        247 LCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~  266 (437)
                      +  ++++.+++|||--....
T Consensus       235 v--~dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  235 V--KDDDKIVVIDFPQMVST  252 (465)
T ss_pred             E--ecCCCEEEeechHhhcc
Confidence            9  56777999999754433

>PLN02236 choline kinase

Probab=97.12  E-value=0.0072  Score=59.71  Aligned_cols=139  Identities=17%  Similarity=0.191  Sum_probs=77.5

Q ss_pred             eecccCceEEEEEEEcC----CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        117 LLGKGSFGQVVKAFDHE----EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~----~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      .|-.|-.-.+|++....    +++.|++|+........-....|..+++.+...++. |.++   +.+...    .|.+|
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~-P~~~---~~~~~g----~v~ef  114 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQG-PRLL---GRFPNG----RVEEF  114 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCC-CceE---EEECCc----eEEEe
Confidence            44446667788875422    346789998865433333347799999999887763 3333   444322    57888


Q ss_pred             ccC-cHHH--------------HH---HhcCC--C--CCCHHHHHHHHHHHH-----------------HHHH----Hhc
Q psy11727        193 LSY-NLYN--------------LI---RNTNF--H--GVSLNLTKKFAQQLC-----------------CALA----FLS  229 (437)
Q Consensus       193 ~~~-~L~~--------------~l---~~~~~--~--~ls~~~~~~i~~qi~-----------------~aL~----~LH  229 (437)
                      +++ ++..              .+   .....  .  ...+..+..+..++.                 ..+.    .+.
T Consensus       115 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~  194 (344)
T PLN02236        115 IHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELS  194 (344)
T ss_pred             eCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhc
Confidence            865 3321              01   11110  0  111223333332211                 1111    122


Q ss_pred             C--CCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        230 S--PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       230 ~--~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .  ....++|+|+++.|||+. ++++.+.|+||..+.
T Consensus       195 ~~~~~~~~cH~Dl~~~Nil~~-~~~~~~~lID~Eya~  230 (344)
T PLN02236        195 GDDQEIGFCHNDLQYGNIMID-EETRAITIIDYEYAS  230 (344)
T ss_pred             ccCCCceEEeCCCCcCcEEEe-CCCCcEEEEeehhcc
Confidence            1  134689999999999995 234679999999874

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.07  E-value=0.0019  Score=57.97  Aligned_cols=102  Identities=25%  Similarity=0.309  Sum_probs=74.3

Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy11727        155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN-TNFHGVSLNLTKKFAQQLCCALAFLSSPE  232 (437)
Q Consensus       155 ~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~-~~~~~ls~~~~~~i~~qi~~aL~~LH~~~  232 (437)
                      .|..++..+...    +++.+++|+|-.    ++|.|+.+. .++..... ...-.-+|..+.+++.+++..+.+|+...
T Consensus         8 ~E~lll~~l~~~----~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~   79 (188)
T PF12260_consen    8 NEPLLLQLLQGS----EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGP   79 (188)
T ss_pred             cHHHHHHHcCCC----CCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            377777777643    379999998843    579999974 44321000 01123589999999999999999997642


Q ss_pred             C-CeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        233 L-SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       233 ~-giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      . .+.-+|++|+|+-+  ++++.+|++|.......
T Consensus        80 ~~~~~lcDv~~~nfgv--~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   80 LGFFYLCDVSPDNFGV--NDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CCcEEEeecchHHeEE--eCCCcEEEEechhcchh
Confidence            2 38889999999999  56778999999876443

Proteins in this uncharacterised family are described as transmembrane proteins.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.87  E-value=0.016  Score=56.95  Aligned_cols=72  Identities=17%  Similarity=0.300  Sum_probs=43.6

Q ss_pred             ceecccCceEEEEEEEcCC---CeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEe
Q psy11727        116 TLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL  192 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~  192 (437)
                      +.|..|=-..+|++.....   +..|++|+........-....|..+++.+...++. |   ++++++. ..   +|.+|
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~-P---~~l~~~~-~G---~i~~f   91 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG-A---KLLGVFG-NG---MIQSF   91 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC-C---ceeEEeC-Cc---Eeehh
Confidence            3344466667888754332   33788998765443333456799999999877754 3   2334342 22   47888


Q ss_pred             ccC
Q psy11727        193 LSY  195 (437)
Q Consensus       193 ~~~  195 (437)
                      +.|
T Consensus        92 i~g   94 (330)
T PLN02421         92 INA   94 (330)
T ss_pred             hcC
Confidence            765

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.85  E-value=0.012  Score=57.22  Aligned_cols=69  Identities=13%  Similarity=0.178  Sum_probs=42.9

Q ss_pred             CceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC--cEEEecc--eeeECCEEEEEEEeccC
Q psy11727        122 SFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR--YIVKLKG--HFTWKNHLCLVFELLSY  195 (437)
Q Consensus       122 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~--~iv~l~~--~~~~~~~~~lV~E~~~~  195 (437)
                      .-|.||++.. .+| .+++|.+...   .........+++.+...++.++  .+..--|  +...++..+++|++++|
T Consensus        18 ~~~~v~~v~T-~~G-~~~Lk~~~~~---~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~~~~~~L~~wi~G   90 (309)
T TIGR02904        18 VTGKLFKVYT-DQG-VFALKKLYAD---RNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHGHFLYYLMPWLDI   90 (309)
T ss_pred             ccCcEEEEEe-CCC-CEEEEEeccc---hHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEECCEEEEEeCCccc
Confidence            3568999854 334 6899988632   2445567777788877665442  2222222  23345667999999866

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.77  E-value=0.025  Score=55.68  Aligned_cols=75  Identities=20%  Similarity=0.180  Sum_probs=49.9

Q ss_pred             eecccCceEEEEEEEcCCCeEEEEEEec----C----CcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        117 LLGKGSFGQVVKAFDHEEKCQVAIKIIK----N----KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       117 ~lG~G~fg~V~~~~~~~~~~~vaiK~i~----~----~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .||-|....||++.+..+++.|+||.-.    .    -.....+...|...+......  ....+.+++.  .+.+...+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~--~P~~vP~vy~--~D~e~~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEH--VPHLVPRIFH--FDTEMAVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhcc--CccccCeEEE--Ecccccee
Confidence            4689999999999976444689999642    1    123356667788888765542  2224555543  45667779


Q ss_pred             EEEeccC
Q psy11727        189 VFELLSY  195 (437)
Q Consensus       189 V~E~~~~  195 (437)
                      |||+++.
T Consensus        78 vMEdL~~   84 (370)
T TIGR01767        78 VMEDLSH   84 (370)
T ss_pred             hHhhCcc
Confidence            9999954

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.74  E-value=0.065  Score=51.87  Aligned_cols=66  Identities=17%  Similarity=0.165  Sum_probs=42.5

Q ss_pred             EEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc---eeeECCEEEEEEEeccC
Q psy11727        125 QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG---HFTWKNHLCLVFELLSY  195 (437)
Q Consensus       125 ~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~---~~~~~~~~~lV~E~~~~  195 (437)
                      .||++.. . +..+++|++...   ......+..+++.+...++.-|-++...+   +...++..++|+|+++|
T Consensus        11 ~v~~v~t-~-~g~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G   79 (313)
T TIGR02906        11 NVYKVET-D-SGNKCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEG   79 (313)
T ss_pred             cEEEEEe-C-CCCeEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccC
Confidence            4888863 2 336889987522   24456678888888777664444554322   12346789999999976

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.61  E-value=0.074  Score=52.10  Aligned_cols=74  Identities=15%  Similarity=0.046  Sum_probs=46.3

Q ss_pred             cCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc--eeeECCEEEEEEEeccC
Q psy11727        121 GSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG--HFTWKNHLCLVFELLSY  195 (437)
Q Consensus       121 G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~--~~~~~~~~~lV~E~~~~  195 (437)
                      +.-..||+... .++..+++|+.+.......+...|+..+..+...++.-+-.+..-+  ....++..+.|+++++|
T Consensus        36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G  111 (325)
T PRK11768         36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGG  111 (325)
T ss_pred             cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCC
Confidence            34457888854 4456799998764333345667899999888765543221122222  22345678889999876

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.39  E-value=0.027  Score=53.82  Aligned_cols=30  Identities=27%  Similarity=0.498  Sum_probs=23.8

Q ss_pred             CCeeeCCCCCCcEEEecCCCCC-EEEEeCCCce
Q psy11727        233 LSIIHCDLKPENILLCSPKRSA-IKIIDFGSSC  264 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~~~~~~-ikL~DFG~s~  264 (437)
                      ..++|+|+.|.|||++  +++. .-|+||+.+.
T Consensus       185 ~~lvHGD~~~~Nilv~--~~~~~~gviDWe~a~  215 (276)
T cd05152         185 TVLVHGDLHPGHILID--EDARVTGLIDWTEAK  215 (276)
T ss_pred             CeeEeCCCCCCcEEEe--CCCCEEEEECcHhcc
Confidence            3589999999999994  3344 5699999874

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1826|consensus

Probab=96.23  E-value=0.001  Score=74.67  Aligned_cols=157  Identities=11%  Similarity=-0.036  Sum_probs=105.3

Q ss_pred             HHHHHHHHhhhcCCCCCcEEEecceee--ECCEEEEEEEec-cCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhc
Q psy11727        155 IEVQLLEKINKADIHSRYIVKLKGHFT--WKNHLCLVFELL-SYNLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLS  229 (437)
Q Consensus       155 ~e~~~~~~l~~~~~~h~~iv~l~~~~~--~~~~~~lV~E~~-~~~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH  229 (437)
                      .|..+.++-......|++++....-..  .....+.+++++ .|.+++.+.+..  +..+....+.....+...+..-+|
T Consensus      1273 kemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~l 1352 (2724)
T KOG1826|consen 1273 KEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVIL 1352 (2724)
T ss_pred             HHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhh
Confidence            344444432222335666555444333  234678899999 558888876543  223444444444444455555555


Q ss_pred             CC-CCC--eeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHH
Q psy11727        230 SP-ELS--IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCIL  303 (437)
Q Consensus       230 ~~-~~g--iiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il  303 (437)
                      +. +.|  .+|++||+.|.+|  ..+-.+|+.++|+.+....   ......+++.|++|+......++.++|+|+.|+-+
T Consensus      1353 s~tnlg~T~v~~~Lkf~lpmI--Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~l 1430 (2724)
T KOG1826|consen 1353 SLTNLGNTNVSKSLKFTLPMI--VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSL 1430 (2724)
T ss_pred             hcccCCccchhhhhhhhccce--ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            43 222  6899999999999  4566799999999983222   12345667889999999998999999999999999


Q ss_pred             HHHHhCCCCC
Q psy11727        304 VELHTGEPLF  313 (437)
Q Consensus       304 ~elltg~~pf  313 (437)
                      |+..-|.++|
T Consensus      1431 y~rs~~n~~f 1440 (2724)
T KOG1826|consen 1431 YLRSDGNAYF 1440 (2724)
T ss_pred             HHHhcccHHH
Confidence            9998888887

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.22  E-value=0.13  Score=50.37  Aligned_cols=138  Identities=21%  Similarity=0.306  Sum_probs=79.0

Q ss_pred             CceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCC-cEEEeccee--eECC--EEEEEEEeccCc
Q psy11727        122 SFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-YIVKLKGHF--TWKN--HLCLVFELLSYN  196 (437)
Q Consensus       122 ~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~-~iv~l~~~~--~~~~--~~~lV~E~~~~~  196 (437)
                      .-..||+..... |+ +++|+.... ....+...|+..+..+....+.-+ -+..+-|-.  .-..  +.+-|++|++|.
T Consensus        37 ~eN~~f~~~~~~-g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTED-GR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecC-CC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            455788886533 33 499998765 556778889999999887665432 123332221  1234  888999999873


Q ss_pred             HHH------H----------HH--hcCCC--------CCCHHH----H---------HHHHHHHHHHHHHhc------CC
Q psy11727        197 LYN------L----------IR--NTNFH--------GVSLNL----T---------KKFAQQLCCALAFLS------SP  231 (437)
Q Consensus       197 L~~------~----------l~--~~~~~--------~ls~~~----~---------~~i~~qi~~aL~~LH------~~  231 (437)
                      ...      .          +.  ..++.        ...+..    .         .....++...+..+.      ..
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            222      0          00  01111        112220    0         012223333333332      22


Q ss_pred             CCC--eeeCCCCCCcEEEecCCCC-CEEEEeCCCce
Q psy11727        232 ELS--IIHCDLKPENILLCSPKRS-AIKIIDFGSSC  264 (437)
Q Consensus       232 ~~g--iiHrDiKp~NIll~~~~~~-~ikL~DFG~s~  264 (437)
                      ..+  +||+|+.|+||++  +... .+.++||+-++
T Consensus       194 ~~~~~iIH~D~~~~NVl~--d~~~~~~g~iDFdDa~  227 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLF--DDDTDVSGFIDFDDAG  227 (331)
T ss_pred             cccceeeecCCCccceeE--cCCCCeeeEEEccccc
Confidence            334  9999999999999  4444 48899999875

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.98  E-value=0.062  Score=53.66  Aligned_cols=83  Identities=22%  Similarity=0.206  Sum_probs=55.1

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEec----CC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~----~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.||-|.-.-||++.+...++.|+||.-.    ..   ....++...|...++......  ..++.+++.  .+.+...
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~--P~~VP~vy~--~D~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELA--PGLVPKVYL--FDSVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhC--CCcCCeEEE--ECcHHhh
Confidence            567799999999999875445679988632    11   233567778888888765422  224666653  4566778


Q ss_pred             EEEEeccC--cHHHHH
Q psy11727        188 LVFELLSY--NLYNLI  201 (437)
Q Consensus       188 lV~E~~~~--~L~~~l  201 (437)
                      +|||+++.  .|.+.+
T Consensus       110 ~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        110 CVMEDLSDHTILRTAL  125 (409)
T ss_pred             HHHHhCcccHHHHHHH
Confidence            99999854  344443

>PRK06148 hypothetical protein; Provisional

Probab=95.97  E-value=0.17  Score=57.24  Aligned_cols=148  Identities=16%  Similarity=0.245  Sum_probs=79.6

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc--CCCCCcEEEecc-ee----eE-CC--E
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA--DIHSRYIVKLKG-HF----TW-KN--H  185 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~--~~~h~~iv~l~~-~~----~~-~~--~  185 (437)
                      +.|+ |..-.+|+... .+|..+++|+.+.. ........|..++..+...  .+.-|.++...+ -.    .. .+  +
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~-~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPS-EPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCc-cchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            3453 34567787753 45667999998743 2233455567778777654  455555554332 11    11 12  5


Q ss_pred             EEEEEEeccC-cHHHH-----------------HHh--cCC------CCCCHH-----------------HHHHHHHHHH
Q psy11727        186 LCLVFELLSY-NLYNL-----------------IRN--TNF------HGVSLN-----------------LTKKFAQQLC  222 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~-----------------l~~--~~~------~~ls~~-----------------~~~~i~~qi~  222 (437)
                      .+-+++|++| .+.+.                 +..  ..+      ..+.|.                 ..+.++.+++
T Consensus       108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~  187 (1013)
T PRK06148        108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL  187 (1013)
T ss_pred             EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence            7889999987 34330                 000  001      111111                 1122222332


Q ss_pred             HHHH-----HhcCCCCCeeeCCCCCCcEEEecCCCCCEE-EEeCCCceec
Q psy11727        223 CALA-----FLSSPELSIIHCDLKPENILLCSPKRSAIK-IIDFGSSCHV  266 (437)
Q Consensus       223 ~aL~-----~LH~~~~giiHrDiKp~NIll~~~~~~~ik-L~DFG~s~~~  266 (437)
                      ..+.     .+..-..++||+|+.++|||+..+..+.+. |+|||-++..
T Consensus       188 ~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        188 ARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA  237 (1013)
T ss_pred             HHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence            2221     222223479999999999999533322555 9999988643

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.89  E-value=0.044  Score=49.96  Aligned_cols=31  Identities=42%  Similarity=0.643  Sum_probs=20.3

Q ss_pred             CCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ..++|.|+.|.|||+. +.++.++|+||..|.
T Consensus       143 ~v~cHnDl~~~Nil~~-~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILIN-NKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEET-SSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEec-cCCCeEEEecHHHHh
Confidence            4689999999999993 356679999999874

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG1236|consensus

Probab=95.87  E-value=0.04  Score=54.61  Aligned_cols=59  Identities=25%  Similarity=0.294  Sum_probs=40.8

Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      ..|+=+|..| ++..+++...   .++...++++.-...|+--+---+ +++|.|+.|.||++.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vD-NFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVD-NFVHADLHPGNVLIR  379 (565)
T ss_pred             ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhh-cceecccCCCcEEEE
Confidence            4455566666 6777776654   466677777777777765442212 599999999999995

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.84  E-value=0.064  Score=52.44  Aligned_cols=73  Identities=22%  Similarity=0.216  Sum_probs=57.5

Q ss_pred             CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        183 KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       183 ~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ..+.|++|++-++.+.- ++.     ..++++..|+.+.+..++-+.. +...-|||+.-+||||  + +|+|.|+||-+
T Consensus       298 ~~y~yl~~kdhgt~is~-ik~-----~~~~e~lsff~s~~sil~~lek-kf~fehrnlt~~niLI--d-~GnvtLIDfkl  367 (488)
T COG5072         298 TLYLYLHFKDHGTPISI-IKA-----DRSEEELSFFWSCISILDILEK-KFPFEHRNLTLDNILI--D-EGNVTLIDFKL  367 (488)
T ss_pred             ceEEEEEEecCCceeee-eec-----ccHHHHHHHHHHHHHHHhhhhh-cCCcccccccccceee--e-cCceEEEEeee
Confidence            35788899988776542 222     3567888899998888877765 4678999999999999  5 88999999999


Q ss_pred             cee
Q psy11727        263 SCH  265 (437)
Q Consensus       263 s~~  265 (437)
                      ++.
T Consensus       368 sRl  370 (488)
T COG5072         368 SRL  370 (488)
T ss_pred             eec
Confidence            973

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.76  E-value=0.091  Score=50.46  Aligned_cols=75  Identities=12%  Similarity=0.117  Sum_probs=49.6

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEecc
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS  194 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~  194 (437)
                      .+.++-|....+|+..  .+++.+.||+-.  ......+..|..-++.+....  .-.+.+++.+....+.-+|||||+.
T Consensus        22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~--~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEAN--PIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             EEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTT--TSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcC--CCCCCeEEEEEeecCCceEEEEeec
Confidence            4567889999999986  677789999876  444577888999999996532  2246677777777777799999985


Q ss_pred             C
Q psy11727        195 Y  195 (437)
Q Consensus       195 ~  195 (437)
                      .
T Consensus        96 ~   96 (288)
T PF03881_consen   96 M   96 (288)
T ss_dssp             -
T ss_pred             C
Confidence            3

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00384 choline kinase; Provisional

Probab=95.54  E-value=0.21  Score=50.00  Aligned_cols=73  Identities=15%  Similarity=0.141  Sum_probs=43.4

Q ss_pred             eceecccCceEEEEEEEcCCC------eEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEK------CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~------~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .+.|..|=...+|++......      +.|.++.........-....|..+++.+...++.    .++++.|..    .+
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glg----P~l~~~f~~----g~  126 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFG----PKIIGRFGD----FT  126 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCC----CeEEEecCC----EE
Confidence            345555777888888643321      1255554333333333446688999998766543    344555542    58


Q ss_pred             EEEeccC
Q psy11727        189 VFELLSY  195 (437)
Q Consensus       189 V~E~~~~  195 (437)
                      |.||++|
T Consensus       127 l~efIeG  133 (383)
T PTZ00384        127 IQEWVEG  133 (383)
T ss_pred             EEEEecc
Confidence            9999976

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.35  E-value=0.3  Score=47.48  Aligned_cols=31  Identities=16%  Similarity=0.395  Sum_probs=25.4

Q ss_pred             CCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ..++|+|+.+.||++.  ...-+-|+||+++..
T Consensus       198 ~~lvHGD~~~gNlii~--~~~~~gVlDwe~~~l  228 (321)
T COG3173         198 PVLVHGDYRPGNLIID--PGRPTGVLDWELATL  228 (321)
T ss_pred             ceeeeCCcccCCEEEe--CCCeeEEEecccccc
Confidence            3589999999999995  344488999999854

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.11  E-value=0.25  Score=49.60  Aligned_cols=75  Identities=12%  Similarity=0.027  Sum_probs=48.3

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEec-----CCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-----NKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~-----~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.||-|....||+..+.  +..++||.-.     ...   ....+...|...++.+...  ....+.+++.++.  +.-
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~--~p~~VPkVy~~de--d~~  110 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRL--CPDHVPEVYHFDR--TMA  110 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhc--CCCCCCeEEEECC--CCC
Confidence            567799999999999763  4468898754     111   1345555666666555432  2225667776655  556


Q ss_pred             EEEEEeccC
Q psy11727        187 CLVFELLSY  195 (437)
Q Consensus       187 ~lV~E~~~~  195 (437)
                      +++||++++
T Consensus       111 vlvME~L~~  119 (418)
T PLN02756        111 LIGMRYLEP  119 (418)
T ss_pred             EEEEeecCC
Confidence            788999965

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.05  E-value=0.17  Score=46.30  Aligned_cols=117  Identities=15%  Similarity=0.122  Sum_probs=72.2

Q ss_pred             ccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccCcH
Q psy11727        120 KGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNL  197 (437)
Q Consensus       120 ~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~~L  197 (437)
                      -|+.++...+..+- | ...+|.++...-.  ..-+..+-.++.++.       .|+++..-  ..-.+-+|.|.|-.- 
T Consensus        72 ~~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~~~~y~nky~v~Armh-------GilrL~ND--n~~~yGvIlE~Cy~~-  139 (308)
T PF07387_consen   72 FNGNSTLLIGKTKI-G-PLFLKKIRSLPCCINDALYFNKYRVFARMH-------GILRLKND--NNYKYGVILERCYKI-  139 (308)
T ss_pred             cCCceEEEEecccc-c-hhhhhhccCCCcccchhhhhhhhhHHHHhh-------heeEeecC--CCceeEEEEeeccCc-
Confidence            35555655554333 3 4556666533222  233455666666653       48888742  334677999998421 


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        198 YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       198 ~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                                  .... ..++..=+.+|.-.|+.+-+.+|+|..|+||+-  |+.|.+||.|=++-
T Consensus       140 ------------~i~~-~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~--D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  140 ------------KINF-SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMC--DKFGYLKLVDPVCL  190 (308)
T ss_pred             ------------ccch-hHHHHHhHHHHHHhhccCCCeecCCCChhheee--cCCCCEEecChhhh
Confidence                        0000 112222246778889766789999999999999  89999999997753

The function of this family is unknown.

>PTZ00296 choline kinase; Provisional

Probab=94.80  E-value=0.65  Score=47.45  Aligned_cols=74  Identities=16%  Similarity=0.090  Sum_probs=46.5

Q ss_pred             eeceecccCceEEEEEEEcC--------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        114 IDTLLGKGSFGQVVKAFDHE--------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~--------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      -++.|..|=.-.+|++....        +++.|.+++.-......-....|..+++.+...++..+ +   ++.|..   
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~-l---~~~f~g---  181 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQ-L---LNTFSG---  181 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCc-e---EEEeCC---
Confidence            34556666667788876432        25679999876544333345668899998888776543 3   344431   


Q ss_pred             EEEEEEeccC
Q psy11727        186 LCLVFELLSY  195 (437)
Q Consensus       186 ~~lV~E~~~~  195 (437)
                       ..|.||++|
T Consensus       182 -g~I~efi~g  190 (442)
T PTZ00296        182 -GRIEEWLYG  190 (442)
T ss_pred             -CEEEEeeCC
Confidence             357888865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	437
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-135
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-135
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-134
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-69
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		5e-69
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-68
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		5e-43
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		5e-43
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		6e-43
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-42
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		5e-42
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		6e-41
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		2e-37
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		2e-37
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		4e-37
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		4e-31
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		4e-31
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		6e-31
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-30
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-30
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-30
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-30
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-30
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		6e-30
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		8e-30
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-29
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-29
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-29
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-29
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-29
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-29
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-29
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-29
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-29
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-29
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-29
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-29
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-29
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-29
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-29
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-29
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-29
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-29
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-29
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-29
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-29
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-29
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-29
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-29
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		8e-29
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-28
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-28
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-28
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-28
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-28
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-28
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-28
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-28
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-28
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-28
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		4e-28
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-28
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-28
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-28
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		6e-28
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		6e-28
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-27
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-27
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-27
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-27
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-27
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-27
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-27
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-27
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-27
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-27
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-27
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-27
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-27
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-27
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-27
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-27
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-27
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-27
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-27
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-27
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-27
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-27
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-27
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-27
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-27
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-27
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		8e-27
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		9e-27
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		9e-27
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-26
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-26
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-26
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-26
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-26
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-26
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-26
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-26
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-26
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		6e-26
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-26
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-26
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-25
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-25
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-25
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-25
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-25
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-25
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-25
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-25
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		4e-25
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-25
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		4e-25
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-25
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		4e-25
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		5e-25
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		5e-25
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		5e-25
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-25
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		6e-25
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		6e-25
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		6e-25
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		6e-25
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-25
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		6e-25
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		6e-25
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		6e-25
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		6e-25
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		6e-25
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-25
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-25
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-25
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		7e-25
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		7e-25
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		7e-25
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		7e-25
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-25
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		7e-25
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-25
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		7e-25
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		7e-25
3hec_A	348	P38 In Complex With Imatinib Length = 348		7e-25
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		7e-25
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		8e-25
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		8e-25
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		8e-25
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		8e-25
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		9e-25
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		9e-25
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-24
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-24
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-24
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-24
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-24
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-24
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-24
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-24
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-24
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-24
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-24
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-24
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-24
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-24
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-24
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		5e-24
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		6e-24
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		6e-24
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-24
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-24
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-24
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-23
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-23
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-23
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-23
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-23
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-23
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-23
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-23
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-23
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-23
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-23
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-23
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		8e-23
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-22
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-22
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-22
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-22
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-22
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-22
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-22
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-22
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-22
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-22
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-22
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-22
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-22
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-22
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-22
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-22
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-22
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-22
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-22
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-22
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-22
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-22
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		6e-22
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-22
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-22
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		8e-22
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-22
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		9e-22
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-21
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-21
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-21
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-21
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-21
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-21
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-21
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-21
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-20
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		4e-20
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		9e-20
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-19
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-19
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-19
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-19
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-19
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		9e-19
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-18
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-18
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-17
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-17
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-17
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-17
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-17
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-17
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		2e-17
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-17
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-17
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-17
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-17
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-17
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-17
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		4e-17
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-17
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-17
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-17
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-17
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-17
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		5e-17
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-17
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-17
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-17
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-17
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-17
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-17
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		6e-17
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		6e-17
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-17
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		6e-17
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-17
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		7e-17
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		7e-17
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-17
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-17
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-17
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-17
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		8e-17
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		9e-17
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		9e-17
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		9e-17
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-17
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		9e-17
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		9e-17
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		9e-17
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-16
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-16
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-16
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-16
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-16
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-16
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-16
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-16
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-16
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-16
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-16
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-16
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-16
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-16
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-16
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-16
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-16
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-16
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-16
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-16
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-16
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-16
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-16
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-16
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-16
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-16
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-16
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-16
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-16
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-16
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-16
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-16
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-16
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-16
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-16
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-16
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-16
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-16
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-16
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-16
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-16
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-16
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-16
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-16
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		3e-16
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-16
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-16
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-16
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		3e-16
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-16
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-16
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-16
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-16
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-16
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-16
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-16
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		5e-16
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-16
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-16
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		5e-16
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		5e-16
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		5e-16
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		6e-16
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		6e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		7e-16
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		8e-16
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-16
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-16
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		9e-16
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		9e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		9e-16
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		9e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-15
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-15
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-15
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-15
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-15
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-15
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-15
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-15
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-15
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-15
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-15
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-15
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-15
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-15
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-15
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-15
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-15
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-15
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-15
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-15
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-15
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-15
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		8e-15
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		1e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		1e-14
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-14
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-14
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-14
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-14
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-14
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-14
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-14
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-14
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-14
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-14
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		2e-14
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-14
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-14
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-14
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-14
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		3e-14
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-14
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-14
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		3e-14
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		3e-14
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-14
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-14
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-14
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-14
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-14
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-14
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		5e-14
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-14
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-14
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		9e-14
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-14
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-14
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-14
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-14
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-14
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-13
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-13
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-13
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-13
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-13
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-13
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-13
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-13
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-13
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-13
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-13
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-13
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-13
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-13
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-13
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-13
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-13
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-13
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		6e-13
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-13
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-13
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		6e-13
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		7e-13
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-13
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		7e-13
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		8e-13
2oza_A	356	Structure Of P38alpha Complex Length = 356		9e-13
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-13
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-12
3soa_A	444	Full-Length Human Camkii Length = 444		1e-12
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-12
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		1e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-12
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-12
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-12
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-12
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-12
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-12
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-12
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-12
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-12
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-12
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-12
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-12
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-12
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-12
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		2e-12
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-12
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-12
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-12
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-12
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-12
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-12
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-12
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-12
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-12
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-12
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-12
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-12
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-12
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		4e-12
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		5e-12
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-12
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		5e-12
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-12
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-12
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		5e-12
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-12
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-12
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-12
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		5e-12
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-12
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-12
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		6e-12
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-12
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-12
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		6e-12
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-12
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		7e-12
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-12
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-12
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		8e-12
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		8e-12
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-11
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-11
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-11
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-11
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-11
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-11
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-11
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-11
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-11
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-11
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		5e-11
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		6e-11
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-11
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		6e-11
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		7e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-11
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-11
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		7e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-11
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-11
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-11
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		7e-11
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		8e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-11
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		8e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		8e-11
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		8e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		8e-11
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-10
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-10
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-10
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-10
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-10
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-10
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-10
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-10
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-10
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-10
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-10
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-10
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-10
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-10
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-10
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-10
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-10
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-10
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-10
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-10
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-10
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-10
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		3e-10
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-10
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		3e-10
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-10
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-10
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-10
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		3e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		4e-10
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		4e-10
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		4e-10
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-10
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		5e-10
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-10
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-10
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		6e-10
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		7e-10
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		8e-10
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-10
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-09
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-09
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-09
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-09
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-09
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-09
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-09
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-09
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-09
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-09
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-09
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-09
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-09
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-09
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-09
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-09
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-09
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-09
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-09
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-09
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-09
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		5e-09
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		6e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		7e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		7e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		8e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		9e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-09
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		9e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-08
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-08
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-08
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-08
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-08
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-08
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-08
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-08
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-08
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-08
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-08
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-08
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-08
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-08
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-08
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-08
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-08
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-08
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		3e-08
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-08
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-08
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-08
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		6e-08
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		8e-08
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		9e-08
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-07
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		1e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-07
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-07
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-07
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-07
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-07
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-07
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-07
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-07
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		5e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		5e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-07
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		6e-07
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		6e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		8e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		8e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		1e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		1e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-06
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		1e-06
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-06
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		1e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-06
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-06
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-06
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-06
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		3e-06
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-06
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-06
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-06
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-06
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-06
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		3e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		3e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		3e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-06
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-06
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-06
3e7e_A	365	Structure And Substrate Recruitment Of The Human Sp		4e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-06
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-06
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		5e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		6e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-06
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-06
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-06
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		8e-06
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		8e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		9e-06
4fl2_A	636	Structural And Biophysical Characterization Of The		9e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		9e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		9e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-06
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-05
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		1e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-05
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-05
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-05
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		1e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-05
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-05
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-05
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-05
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		2e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-05
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-05
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-05
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-05
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		3e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-05
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-05
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		3e-05
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-05
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		4e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		4e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		4e-05
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-05
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		6e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		7e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		7e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		8e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		8e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		9e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-05
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		9e-05
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		9e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		2e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		4e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		5e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		6e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		8e-04

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/355 (68%), Positives = 296/355 (83%), Gaps = 3/355 (0%)
Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
           S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VA
Sbjct: 6   SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 64
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
           IKIIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 65  IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 124
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           +L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+
Sbjct: 125 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 184
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
           VDQM KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  I
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 304
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           LGV+             H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 305 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  477 bits (1227), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/355 (68%), Positives = 296/355 (83%), Gaps = 3/355 (0%)
Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
           S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VA
Sbjct: 25  SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
           IKIIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 84  IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           +L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKRSAIKI+
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV 203
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
           VDQM KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           LGV+             H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/355 (68%), Positives = 295/355 (83%), Gaps = 3/355 (0%)
Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
           S+KKE+K V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  E+  VA
Sbjct: 25  SHKKERK-VYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVA 83
Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLY 198
           IKIIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+LSYNLY
Sbjct: 84  IKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLY 143
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           +L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKR AIKI+
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIV 203
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           DFGSSC +GQ +YQ IQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPLFSG NE
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGSKRLDTI 377
           VDQM KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+++L  I
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323
Query: 378 LGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           LGV+             H++ADY+KFKDLILRML YDPK RI P   L+H FF K
Sbjct: 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  258 bits (659), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/358 (42%), Positives = 206/358 (57%), Gaps = 37/358 (10%)
Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
           +N G+DD+   Y+    +    RYE+  ++GKGSFGQVVKA+DH+    VA+K+++N+K 
Sbjct: 76  NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
           F  QA  E+++LE + K D  ++  ++ +  +FT++NH+C+ FELLS NLY LI+   F 
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
           G SL L +KFA  +   L  L      IIHCDLKPENILL    RS IK+IDFGSSC+  
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Q +Y  IQSR+YR+PEV+LG  Y + IDMWSLGCIL EL TG PL  G++E DQ+  +IE
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
           +LGMP   LL  ASK +K F              LSD S VL      R K R P   R 
Sbjct: 314 LLGMPSQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + + G D                     F D + + L +DP  R++P   LRH + 
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  258 bits (659), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/358 (42%), Positives = 206/358 (57%), Gaps = 37/358 (10%)
Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
           +N G+DD+   Y+    +    RYE+  ++GKGSFGQVVKA+DH+    VA+K+++N+K 
Sbjct: 76  NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
           F  QA  E+++LE + K D  ++  ++ +  +FT++NH+C+ FELLS NLY LI+   F 
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
           G SL L +KFA  +   L  L      IIHCDLKPENILL    RS IK+IDFGSSC+  
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Q +Y  IQSR+YR+PEV+LG  Y + IDMWSLGCIL EL TG PL  G++E DQ+  +IE
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
           +LGMP   LL  ASK +K F              LSD S VL      R K R P   R 
Sbjct: 314 LLGMPSQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + + G D                     F D + + L +DP  R++P   LRH + 
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  256 bits (654), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/358 (42%), Positives = 205/358 (57%), Gaps = 37/358 (10%)
Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
           +N G+DD+   Y+    +    RYE+  ++GKG FGQVVKA+DH+    VA+K+++N+K 
Sbjct: 76  NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 149 FLNQAQIEVQLLEKINKADI-HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
           F  QA  E+++LE + K D  ++  ++ +  +FT++NH+C+ FELLS NLY LI+   F 
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
           G SL L +KFA  +   L  L      IIHCDLKPENILL    RS IK+IDFGSSC+  
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Q +Y  IQSR+YR+PEV+LG  Y + IDMWSLGCIL EL TG PL  G++E DQ+  +IE
Sbjct: 254 QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313
Query: 328 VLGMPPGYLLHGASKTSKYF------------DRLSDNSYVLKKSTDTR-KERLPGSKRL 374
           +LGMP   LL  ASK +K F              LSD S VL      R K R P   R 
Sbjct: 314 LLGMPXQKLLD-ASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESRE 372
Query: 375 --DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + + G D                     F D + + L +DP  R++P   LRH + 
Sbjct: 373 WGNALKGCDDPL------------------FLDFLKQCLEWDPAVRMTPGQALRHPWL 412

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94  DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
           DD+    + + G+   +RYEI   LG+G+FG+VV+  DH   K QVA+KII+N   +   
Sbjct: 12  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
           A++E+ +L+KI + D  ++++ V +   F +  H+C+ FELL  N +  ++  NF    L
Sbjct: 72  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
              +  A QLC AL FL   +L+  H DLKPENIL                   S K ++
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           I++ DFGS+    +     + +R+YR PEV+L + +    D+WS+GCIL E + G  LF 
Sbjct: 190 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
                + +  + ++LG  P +++H   K  KYF +      V  +++   +      K L
Sbjct: 250 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 305
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + +  D                 ++++  DL+ RML +DP +RI+    L H FF
Sbjct: 306 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94  DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
           DD+    + + G+   +RYEI   LG+G+FG+VV+  DH   K QVA+KII+N   +   
Sbjct: 35  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
           A++E+ +L+KI + D  ++++ V +   F +  H+C+ FELL  N +  ++  NF    L
Sbjct: 95  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
              +  A QLC AL FL   +L+  H DLKPENIL                   S K ++
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           I++ DFGS+    +     + +R+YR PEV+L + +    D+WS+GCIL E + G  LF 
Sbjct: 213 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
                + +  + ++LG  P +++H   K  KYF +      V  +++   +      K L
Sbjct: 273 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 328
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + +  D                 ++++  DL+ RML +DP +RI+    L H FF
Sbjct: 329 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)
Query: 94  DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
           DD+    + + G+   +RYEI   LG+G+FG+VV+  DH   K QVA+KII+N   +   
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 153 AQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
           A++E+ +L+KI + D  ++++ V +   F +  H+C+ FELL  N +  ++  NF    L
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSA 254
              +  A QLC AL FL   +L+  H DLKPENIL                   S K ++
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLT--HTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           I++ DFGS+    +     + +R+YR PEV+L + +    D+WS+GCIL E + G  LF 
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
                + +  + ++LG  P +++H   K  KYF +      V  +++   +      K L
Sbjct: 241 THENREHLVMMEKILGPIPSHMIHRTRK-QKYFYK---GGLVWDENSSDGRYVKENCKPL 296
Query: 375 DTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + +  D                 ++++  DL+ RML +DP +RI+    L H FF
Sbjct: 297 KSYMLQDSL---------------EHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 46/358 (12%)
Query: 101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQL 159
           I + G+    RYEI   LG+G+FG+VV+  DH+   + VA+KI+KN   +   A+ E+Q+
Sbjct: 5   ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 160 LEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
           LE +N  D +S +  V++   F    H+C+VFELL  + Y+ I+   F    L+  +K A
Sbjct: 65  LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLC--------SPK---------RSAIKIIDFG 261
            Q+C ++ FL S +L+  H DLKPENIL          +PK            IK++DFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
           S+ +  +     + +R+YR+PEV+L + +    D+WS+GCIL+E + G  +F   +  + 
Sbjct: 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILG 379
           +  +  +LG  P +++    K  KYF  DRL  + +    S+  R          + +L 
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEH----SSAGRYVSRACKPLKEFMLS 297
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF--LKHSV 435
            D                 ++ +  DLI +ML YDP KRI+    L+H FF  LK S+
Sbjct: 298 QD----------------VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  168 bits (426), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 184/358 (51%), Gaps = 46/358 (12%)
Query: 101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQL 159
           I + G+    RYEI   LG+G+FG+VV+  DH+   + VA+KI+KN   +   A+ E+Q+
Sbjct: 5   ICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQV 64
Query: 160 LEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
           LE +N  D +S +  V++   F    H+C+VFELL  + Y+ I+   F    L+  +K A
Sbjct: 65  LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLC--------SPK---------RSAIKIIDFG 261
            Q+C ++ FL S +L+  H DLKPENIL          +PK            IK++DFG
Sbjct: 125 YQICKSVNFLHSNKLT--HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
           S+ +  +     +  R+YR+PEV+L + +    D+WS+GCIL+E + G  +F   +  + 
Sbjct: 183 SATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILG 379
           +  +  +LG  P +++    K  KYF  DRL  + +    S+  R          + +L 
Sbjct: 243 LAMMERILGPLPKHMIQKTRK-RKYFHHDRLDWDEH----SSAGRYVSRACKPLKEFMLS 297
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF--LKHSV 435
            D                 ++ +  DLI +ML YDP KRI+    L+H FF  LK S+
Sbjct: 298 QD----------------VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  165 bits (417), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 185/359 (51%), Gaps = 41/359 (11%)
Query: 94  DDENYDYIIKH-GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIKIIKNKKPFLN 151
           +D+   ++I H G+   +RYEI + LG+G+FG+VV+  DH     +VA+KIIKN + +  
Sbjct: 16  EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 152 QAQIEVQLLEKINKADIHSRYI-VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVS 210
            A++E+ +LEKIN+ D  ++ + V++   F +  H+C+ FELL  + ++ +++ N+    
Sbjct: 76  AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRS 253
           ++  +  A QLC A+ FL   +L+  H DLKPENIL                   S K +
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLT--HTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 254 AIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           A++++DFGS+    +     + +R+YR+PEV+L + +    D+WS+GCI+ E + G  LF
Sbjct: 194 AVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF 253
Query: 314 SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKR 373
              +  + +  +  +LG  P  ++    K  KYF R         ++T   +      K 
Sbjct: 254 QTHDNREHLAMMERILGPIPSRMIRKTRK-QKYFYR---GRLDWDENTSAGRYVRENCKP 309
Query: 374 LDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           L   L  +                 ++ +  DLI  ML Y+P KR++    L+H FF +
Sbjct: 310 LRRYLTSEA---------------EEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 22/265 (8%)
Query: 105 GEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
           GE + D RY +   LG G F  V  A D      VA+KI++  K +   A+ E++LL+++
Sbjct: 13  GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 164 NKAD------IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
           N AD      + + +I+KL  HF  K     H+ +VFE+L  NL  LI+     G+ L  
Sbjct: 73  NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILL---CSPKR-SAIKIIDFGSSCHVGQT 269
            K+ ++QL   L ++      IIH D+KPEN+L+    SP+    IKI D G++C   + 
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF------SGKNEVDQMT 323
               IQ+R YRSPEVLLG P+    D+WS  C++ EL TG+ LF      S   + D + 
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFD 348
           +IIE+LG  P YLL     T  +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 22/265 (8%)
Query: 105 GEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI 163
           GE + D RY +   LG G F  V  A D      VA+KI++  K +   A+ E++LL+++
Sbjct: 13  GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 164 NKAD------IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
           N AD      + + +I+KL  HF  K     H+ +VFE+L  NL  LI+     G+ L  
Sbjct: 73  NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILL---CSPKR-SAIKIIDFGSSCHVGQT 269
            K+ ++QL   L ++      IIH D+KPEN+L+    SP+    IKI D G++C   + 
Sbjct: 133 VKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF------SGKNEVDQMT 323
               IQ+R YRSPEVLLG P+    D+WS  C++ EL TG+ LF      S   + D + 
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFD 348
           +IIE+LG  P YLL     T  +F+
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFN 276

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  152 bits (384), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 46/362 (12%)
Query: 94  DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA 153
           DDE   +  K G    + + +   +G G+FG+V+     + K   A+K+++N K +   A
Sbjct: 19  DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
           +IE  +L+KI   DI++  IVK  G F + +H+CL+FE L  +LY +I   N++G  +  
Sbjct: 79  KIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED 138
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP----------------------- 250
            K +  ++  AL +L   ++S+ H DLKPENILL  P                       
Sbjct: 139 IKLYCIEILKALNYLR--KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT 196
Query: 251 KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE 310
           K + IK+IDFG +          I +R YR+PEV+L + +D++ DMWS GC+L EL+TG 
Sbjct: 197 KSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 311 PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERL 368
            LF     ++ +  +  ++   P  +L+ A+KT  SKY ++               + +L
Sbjct: 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNK--------------DELKL 302
Query: 369 PGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHE 428
              +   +I  +              H L     F D +  +L  DP  R SP  +L+H+
Sbjct: 303 AWPENASSINSIKHVKKCLPLYKIIKHEL-----FCDFLYSILQIDPTLRPSPAELLKHK 357
Query: 429 FF 430
           F 
Sbjct: 358 FL 359

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  132 bits (332), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 177/407 (43%), Gaps = 90/407 (22%)
Query: 92  GHDDEN----YDYI------IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK 141
           G DDE      DY       +K G+ F  RY +   LG G F  V   +D + K  VA+K
Sbjct: 3   GSDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMK 62
Query: 142 IIKNKKPFLNQAQIEVQLLEKI---NKADIHSRYIVKLKGHFTWKN----HLCLVFELLS 194
           ++K+ + +   A  E++LL+ +   + +D +   +V+L   F        H+C+VFE+L 
Sbjct: 63  VVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLG 122
Query: 195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC------ 248
           ++L   I  +N+ G+ +   K   +Q+   L +L S +  IIH D+KPENIL+C      
Sbjct: 123 HHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILMCVDDAYV 181
Query: 249 ----------------SPKRSA-----------------------IKIIDFGSSCHVGQT 269
                            P  SA                       +KI D G++C V + 
Sbjct: 182 RRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKH 241
Query: 270 LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMT 323
             + IQ+R YRS EVL+G  Y    D+WS  C+  EL TG+ LF   SG++   + D + 
Sbjct: 242 FTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIA 301
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXX 383
            IIE+LG  P +       + ++F+R  +  ++ K         L      D ++     
Sbjct: 302 HIIELLGSIPRHFALSGKYSREFFNRRGELRHITK---------LKPWSLFDVLV----- 347
Query: 384 XXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                          D  +F D ++ ML   P+KR S    LRH + 
Sbjct: 348 -------EKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 387

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 175/406 (43%), Gaps = 91/406 (22%)
Query: 94  DDENYD---------YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           DDE  D         +++K G+ F  RY +   LG G F  V  ++D + K  VA+K++K
Sbjct: 12  DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71
Query: 145 NKKPFLNQAQIEVQLLEKINKADIHS---RYIVKLKGHFTWKN----HLCLVFELLSYNL 197
           + + +   A  E++LL+ +  +D +      +V+L   F        H+C+VFE+L ++L
Sbjct: 72  SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 131
Query: 198 YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC--------- 248
              I  +N+ G+ L   KK  QQ+   L +L + +  IIH D+KPENILL          
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRL 190
Query: 249 -------------SPKRSA-------------------------IKIIDFGSSCHVGQTL 270
                         P  SA                         +KI D G++C V +  
Sbjct: 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF 250
Query: 271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMTK 324
            + IQ+R YRS EVL+G  Y+   D+WS  C+  EL TG+ LF   SG+    + D +  
Sbjct: 251 TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIAL 310
Query: 325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXX 384
           IIE+LG  P  L+     + ++F +  D  ++ K       E L                
Sbjct: 311 IIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL---------------- 354
Query: 385 XXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      S  +   F D +L ML   P+KR +    LRH + 
Sbjct: 355 -----VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 171/391 (43%), Gaps = 82/391 (20%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQL 159
           +++K G+ F  RY +   LG G F  V  ++D + K  VA+K++K+ + +   A  E++L
Sbjct: 11  HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRL 70
Query: 160 LEKINKADIHS---RYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLN 212
           L+ +  +D +      +V+L   F        H+C+VFE+L ++L   I  +N+ G+ L 
Sbjct: 71  LKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLP 130
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC----------------------SP 250
             KK  QQ+   L +L + +  IIH D+KPENILL                        P
Sbjct: 131 CVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPP 189
Query: 251 KRSA-------------------------IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL 285
             SA                         +KI D G++C V +   + IQ+R YRS EVL
Sbjct: 190 SGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL 249
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF---SGKN---EVDQMTKIIEVLGMPPGYLLHG 339
           +G  Y+   D+WS  C+  EL TG+ LF   SG+    + D +  IIE+LG  P  L+  
Sbjct: 250 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVA 309
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
              + ++F +  D  ++ K       E L                           S  +
Sbjct: 310 GKYSKEFFTKKGDLKHITKLKPWGLFEVL---------------------VEKYEWSQEE 348
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              F D +L ML   P+KR +    LRH + 
Sbjct: 349 AAGFTDFLLPMLELIPEKRATAAECLRHPWL 379

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE LS +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 67  KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKPEN+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 125 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE LS +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKPEN+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 151/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE LS +L + +  +   G+ L L K +  QL   LAF  S    
Sbjct: 68  KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 151/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE LS +L + +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L + +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKPEN+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 56/334 (16%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKI 163
           +F++ ++    +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           N  +I     VKL      +N L LVFE L  +L   +  +   G+ L L K +  QL  
Sbjct: 67  NHPNI-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
            LAF  S    ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR
Sbjct: 122 GLAFCHSHR--VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           +PE+LLG  Y   A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHS 396
            +    Y                  K   P   R D    +  +D               
Sbjct: 238 VTSMPDY------------------KPSFPKWARQDFSKVVPPLDEDG------------ 267
Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  + L+ +ML YDP KRIS    L H FF
Sbjct: 268 -------RSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  128 bits (321), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 56/334 (16%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKI 163
           +F++ ++    +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           N  +I     VKL      +N L LVFE L  +L   +  +   G+ L L K +  QL  
Sbjct: 67  NHPNI-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
            LAF  S    ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR
Sbjct: 122 GLAFCHSHR--VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           +PE+LLG  Y   A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHS 396
            +    Y                  K   P   R D    +  +D               
Sbjct: 238 VTSMPDY------------------KPSFPKWARQDFSKVVPPLDEDG------------ 267
Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  + L+ +ML YDP KRIS    L H FF
Sbjct: 268 -------RSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 67  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKPEN+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 125 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 68  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKPEN+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 126 VLHRDLKPENLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 69
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 70  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 127
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 128 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 241
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 242 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 268
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 269 SQMLHYDPNKRISAKAALAHPFF 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 67  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 67  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 68  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 67
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 68  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 126 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 239
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 240 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 266
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 267 SQMLHYDPNKRISAKAALAHPFF 289

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 69
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 70  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 127
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 128 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 241
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 242 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 268
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 269 SQMLHYDPNKRISAKAALAHPFF 291

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 66
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 67  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 124
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 125 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 238
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 239 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 265
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 266 SQMLHYDPNKRISAKAALAHPFF 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  125 bits (313), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   L+F  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 49/340 (14%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           +   K +DR++++ + G+G+FG V    +      VAIK +     F N+   E+Q+++ 
Sbjct: 16  ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQD 72
Query: 163 INKADIHSRYIVKLKGHFTWKN-------HLCLVFELLSYNLYNLIRNTNFHGVSLN--L 213
           +  A +H   IV+L+ +F           +L +V E +   L+   RN     V+    L
Sbjct: 73  L--AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL--Y 271
            K F  QL  ++  L  P +++ H D+KP N+L+ +     +K+ DFGS+  +  +    
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 272 QYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
            YI SRYYR+PE++ G   Y  A+D+WS+GCI  E+  GEP+F G N   Q+ +I+ VLG
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXX 390
            P   +L   + +    D  +                +P S                   
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKG-------------IPWSNVFSD-------------- 282
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               HSL D  +  DL+  +L Y P++R+ P   L H +F
Sbjct: 283 ----HSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 148/323 (45%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+  I+     +   + A  E+ LL+++N  +I     V
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 65
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 66  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 123
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 124 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 237
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 238 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 264
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 265 SQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 148/323 (45%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+  I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE L  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 68
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE +  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 69  KLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 126
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 127 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 240
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 241 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 267
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 268 SQMLHYDPNKRISAKAALAHPFF 290

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 56/323 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N  +I     V
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----V 64
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           KL      +N L LVFE +  +L   +  +   G+ L L K +  QL   LAF  S    
Sbjct: 65  KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-- 122
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPEVLLGIPY- 290
           ++H DLKP+N+L+ +    AIK+ DFG +   G  +  Y   + + +YR+PE+LLG  Y 
Sbjct: 123 VLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRL 350
             A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +    Y    
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY---- 236
Query: 351 SDNSYVLKKSTDTRKERLPGSKRLD---TILGVDXXXXXXXXXXXXXHSLADYMKFKDLI 407
                         K   P   R D    +  +D                      + L+
Sbjct: 237 --------------KPSFPKWARQDFSKVVPPLDEDG-------------------RSLL 263
Query: 408 LRMLTYDPKKRISPTNVLRHEFF 430
            +ML YDP KRIS    L H FF
Sbjct: 264 SQMLHYDPNKRISAKAALAHPFF 286

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 173 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 60  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 116
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 177 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 35  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 91
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 92  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 152 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 208
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 58  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 114
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 175 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 157
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 218 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 50  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 106
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 167 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 27  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 83
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 84  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 144 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 151/331 (45%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  AFD      VA+K  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I     H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
           C +  L S    IIH DLKP NI++ S     +KI+DFG   ++C     +  Y+ +RYY
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAC-TNFMMTPYVVTRYY 191
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           R+PEV+LG+ Y   +D+WS+GCI+ EL  G  +F G + +DQ  K+IE LG P    +  
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
              T +        +YV        + + PG K  +  L  D              S A 
Sbjct: 252 LQPTVR--------NYV------ENRPKYPGIKFEE--LFPDWIFPSESERDKIKTSQA- 294
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               +DL+ +ML  DP KRIS    LRH + 
Sbjct: 295 ----RDLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S   + +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 145/330 (43%), Gaps = 39/330 (11%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  AFD      VA+K  K  +PF NQ   +    E +    +
Sbjct: 21  LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I     H            Q+ 
Sbjct: 79  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLLYQML 134
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG   +      +  Y+ +RYYR
Sbjct: 135 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTASTNFMMTPYVVTRYYR 190
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ EL  G  +F G + +DQ  K+IE LG P    +   
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 250
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADY 400
             T +        +YV        +   PG       +  +                   
Sbjct: 251 QPTVR--------NYV------ENRPAYPG-------IAFEELFPDWIFPSESERDKIKT 289
Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + +DL+ +ML  DP KRIS    LRH + 
Sbjct: 290 SQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 153/341 (44%), Gaps = 58/341 (17%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           +DRY   T LG+G++G+V KA D      VAIK I+    ++     A  EV LL+    
Sbjct: 33  IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLK---- 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLI-RNTNFHGVSLNLTKKFAQQLCCA 224
            ++  R I++LK      + L L+FE    +L   + +N +   VS+ + K F  QL   
Sbjct: 89  -ELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD---VSMRVIKSFLYQLING 144
Query: 225 LAFLSSPELSIIHCDLKPENILLC---SPKRSAIKIIDFGSSCHVGQTLYQY---IQSRY 278
           + F  S     +H DLKP+N+LL    + +   +KI DFG +   G  + Q+   I + +
Sbjct: 145 VNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR PE+LLG   Y  ++D+WS+ CI  E+    PLF G +E+DQ+ KI EVLG+P     
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPG--SKRLDTILGVDXXXXXXXXXXXXXH 395
            G +    +                  K+  P    K L  +LG                
Sbjct: 263 PGVTALPDW------------------KQSFPKFRGKTLKRVLGALLDDEGLDLLTA--- 301
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD 436
                         ML  DP KRIS  N L H +F  +  D
Sbjct: 302 --------------MLEMDPVKRISAKNALEHPYFSHNDFD 328

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S   + +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 254 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 291
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 130 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 246 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 283
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 247 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 284
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 174
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 175 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 291 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 328
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 254 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 291
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 22  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 80  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 136 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 251
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 252 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 289
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 290 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 320

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 247 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 284
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 162/347 (46%), Gaps = 44/347 (12%)
Query: 96  ENYDYIIKHGEK---FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
           +N  Y ++ G+     L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ
Sbjct: 45  DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQ 102
Query: 153 AQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNF 206
              +    E +    ++ + I+ L   FT +  L       LV EL+  NL  +I+    
Sbjct: 103 THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 162
Query: 207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
           H            Q+ C +  L S    IIH DLKP NI++ S     +KI+DFG +   
Sbjct: 163 H----ERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTA 214
Query: 267 GQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
           G +  +  Y+ +RYYR+PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 325 IIEVLGMP-PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXX 383
           +IE LG P P ++         Y +         K +  T  +  P     D++   D  
Sbjct: 275 VIEQLGTPCPEFMKKLQPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-- 321
Query: 384 XXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      H+     + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 322 ---------SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 91  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 151 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 173 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 30  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 87  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 147 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 203
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 41  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 97
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 98  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 158 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 214
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 90
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 91  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 151 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 207
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 26  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 82
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 83  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 143 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 199
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 23  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 79
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 80  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 140 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 196
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 XGIKHLHS--AGIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG G++  V K  +      VA+K +K  +++   + A  E+ L++++   +I     V+
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI-----VR 67
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNF----HGVSLNLTKKFAQQLCCALAFLSSP 231
           L      +N L LVFE +  +L   + +        G+ LNL K F  QL   LAF    
Sbjct: 68  LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-- 125
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGI 288
           E  I+H DLKP+N+L+   KR  +K+ DFG +   G    T    + + +YR+P+VL+G 
Sbjct: 126 ENKILHRDLKPQNLLIN--KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 289 -PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKY 346
             Y  +ID+WS GCIL E+ TG+PLF G N+ +Q+  I +++G P   L    +K  KY
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HS 170
           Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I   
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRL 78
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALAFL 228
           RY     G      +L LV + +   +Y + R+ +    +L +   K +  QL  +LA++
Sbjct: 79  RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+     I SRYYR+PE++ 
Sbjct: 139 HS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 287 GIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 82  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 137
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 138 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 254 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 290
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 291 KASQARDLLSKMLVIDASKRISVDEALQHPYI 322

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 57/339 (16%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           K GE+    Y    ++G GSFG V +A    E  +VAIK +   K F N+   E+Q++  
Sbjct: 33  KTGEQREIAYTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRFKNR---ELQIMRI 88
Query: 163 INKADIHSRYIVKLKGHFTWKN------HLCLVFELLSYNLYNLIRNTNF--HGVSLNLT 214
           +   ++     V LK  F           L LV E +   +Y   R+       + + L 
Sbjct: 89  VKHPNV-----VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQ 272
           K +  QL  +LA++ S  + I H D+KP+N+LL  P    +K+IDFGS+     G+    
Sbjct: 144 KLYMYQLLRSLAYIHS--IGICHRDIKPQNLLL-DPPSGVLKLIDFGSAKILIAGEPNVS 200
Query: 273 YIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
            I SRYYR+PE++ G   Y   ID+WS GC++ EL  G+PLF G++ +DQ+ +II+VLG 
Sbjct: 201 XICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260
Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
           P           S+   +  + +Y+  K    R    P SK        D          
Sbjct: 261 P-----------SREQIKTMNPNYMEHKFPQIRPH--PFSKVFRPRTPPDAI-------- 299
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                        DLI R+L Y P  R++    L H FF
Sbjct: 300 -------------DLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S   + +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 XGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 253 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 290
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 25  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 82
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 83  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 138
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  ++ +RYYR
Sbjct: 139 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 254
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 255 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 291
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 292 KASQARDLLSKMLVIDASKRISVDEALQHPYI 323

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ   +    E +    +
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       LV EL+  NL  +I+    H            Q+ 
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH----ERMSYLLYQML 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 130 XGIKHLHSA--GIIHRDLKPSNIVVKS--DXTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLAD 399
                 Y +         K +  T  +  P     D++   D             H+   
Sbjct: 246 QPTVRNYVENRP------KYAGLTFPKLFP-----DSLFPAD-----------SEHNKLK 283
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G VV A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S   + +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+G I+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 28  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 86  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 141
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 142 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P    +   
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 257
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 258 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 294
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 295 KASQARDLLSKMLVIDASKRISVDEALQHPYI 326

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 75  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 130
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 131 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P    +   
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 247 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 283
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 284 KASQARDLLSKMLVIDASKRISVDEALQHPYI 315

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++       S  LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------SQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   + S +KI+DFG   H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLCRHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 150/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +      + +RYYR
Sbjct: 137 CGIKHLHS--AGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNAL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 86  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   + S +KI+DFG + H    +  Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 82  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   + S +KI+DFG + H    +  Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDSELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 72/355 (20%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN------ 164
           +Y +   LG GSFG V + FD E   + A+K +     + N+    +++L+ +N      
Sbjct: 8   KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 165 --------------KADIHSRYIVKLKG----------HFTWKNHLCLVFELLSYNLYNL 200
                           D H++   K  G          + +   +L ++ E +   L+ +
Sbjct: 68  YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 201 IRNTNFHG--VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           +++    G  + +NL   +  QL  A+ F+ S  L I H D+KP+N+L+ S K + +K+ 
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHRDIKPQNLLVNS-KDNTLKLC 184
Query: 259 DFGSSCHV--GQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSG 315
           DFGS+  +   +     I SR+YR+PE++LG   Y  +ID+WS+GC+  EL  G+PLFSG
Sbjct: 185 DFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244
Query: 316 KNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD 375
           +  +DQ+ +II+++G P         +  +     ++  +   K+ D RK    G+  L 
Sbjct: 245 ETSIDQLVRIIQIMGTP------TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298
Query: 376 TILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                                        DL+ ++L Y+P  RI+P   + H FF
Sbjct: 299 I----------------------------DLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYR 280
             +  L S    IIH DLKP NI++ S   + +KI+DFG +   G +  +  Y+ +RYYR
Sbjct: 137 VGIKHLHSA--GIIHRDLKPSNIVVKS--DATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+G I+ E+  G  LF G + +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 87  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 87  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  KPF +     +   E++LL+ + 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 92  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-------LTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 87  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTADEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 27  ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 85  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 85  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 103 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 150
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 151 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGYV 206
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 267 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 305
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 306 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 334

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +      + +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-PGYLLHG 339
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P P ++   
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKL 252
Query: 340 ASKTSKYFD-RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
                 Y + R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRNYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 91  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 138
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 139 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDXELKILDFGLARHTDDEMTGYV 194
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 255 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 293
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 294 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 322

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  112 bits (279), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 85  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 132
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 133 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 188
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 249 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 287
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 288 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 86  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 21  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 78
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 79  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 126
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 127 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 182
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 243 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 281
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 282 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 310

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 20  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 77
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 78  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 125
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 126 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 181
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 242 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 280
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 281 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 309

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 86
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 87  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 134
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 135 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 190
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 251 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 289
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 290 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 318

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ   +    E +    +
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 169 HSRYIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           + + I+ L   FT +  L       +V EL+  NL  +I+    H            Q+ 
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH----ERMSYLLYQML 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY--IQSRYYR 280
           C +  L S    IIH DLKP NI++ S     +KI+DFG +   G +      + +RYYR
Sbjct: 137 CGIKHLHSA--GIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P    +   
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 341 SKTSKYF--DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
             T + +  +R     Y  +K         P     D +   D             H+  
Sbjct: 253 QPTVRTYVENRPKYAGYSFEK-------LFP-----DVLFPAD-----------SEHNKL 289
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              + +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 KASQARDLLSKMLVIDASKRISVDEALQHPYI 321

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 86  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 250 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 264 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 82  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 99  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 146
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 147 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 263 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 301
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 302 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 330

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 92  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 91
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 92  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 139
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 140 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 195
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 256 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 294
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 295 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 323

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 84
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++      ++ +  +   
Sbjct: 85  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
            Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+ +R+
Sbjct: 137 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRW 192
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   LL
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 252
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
              S  S   Y   L+               ++P     +  +G +              
Sbjct: 253 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 287
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                    DL+ +ML  D  KRI+    L H +F ++
Sbjct: 288 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 316

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 90
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 91  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 138
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 139 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 194
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 255 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 293
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 294 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 322

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 77  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 124
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 125 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 241 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 279
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 280 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 308

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 82  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++      ++ +  +   
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
            Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+ +R+
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYVATRW 187
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   LL
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
              S  S   Y   L+               ++P     +  +G +              
Sbjct: 248 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 282
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                    DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 76  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 240 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 81
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 82  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 129
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 130 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 185
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 246 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 284
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 285 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 313

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 66/340 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  ++D +   ++A+K  K  +PF +     +   E++LL+ + 
Sbjct: 51  ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 108
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 109 HENV-----IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 156
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 157 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 212
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y++ +D+WS+GCI+ EL TG  LF G + ++Q+ +I+ + G PP
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXX 393
             ++   S+   +  R   NS            ++P     D  +G +            
Sbjct: 273 ASVI---SRMPSHEARNYINSL----------PQMPKRNFADVFIGANPLAV-------- 311
Query: 394 XHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                      DL+ +ML  D  KRI+ +  L H +F ++
Sbjct: 312 -----------DLLEKMLVLDTDKRITASEALAHPYFSQY 340

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 76
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 77  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 124
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 125 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 180
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 241 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 279
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 280 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 308

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 102
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 103 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTDDHV 150
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 151 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 206
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 267 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 305
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 306 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 334

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 76  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CAKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 54/338 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKA 166
           D YEI   +G G++G V  A       QVAIK I N    +  A+    E+++L+     
Sbjct: 54  DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 167 DIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +I + + I++    +     + +V +L+  +L+ +I ++    ++L   + F  QL   L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGL 171
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQYIQSRY 278
            ++ S +  +IH DLKP N+L+   +   +KI DFG       S       + +Y+ +R+
Sbjct: 172 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 279 YRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L +  Y  AID+WS+GCI  E+     LF GKN V Q+  I+ VLG P   ++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 338 H--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
              GA +   Y   L     V  ++        PG+ R                      
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETV------YPGADR---------------------- 319
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                 +   L+ RML ++P  RIS    LRH F  K+
Sbjct: 320 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKY 351

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 85
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 86  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 133
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 134 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 189
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 250 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 288
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 289 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 317

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 98
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 99  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 146
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 147 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 202
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 263 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 301
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 302 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 330

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 76  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 264 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 54/338 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKA 166
           D YEI   +G G++G V  A       QVAIK I N    +  A+    E+++L+     
Sbjct: 55  DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 167 DIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +I + + I++    +     + +V +L+  +L+ +I ++    ++L   + F  QL   L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGL 172
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------LYQYIQSRY 278
            ++ S +  +IH DLKP N+L+   +   +KI DFG +  +  +       + +Y+ +R+
Sbjct: 173 KYMHSAQ--VIHRDLKPSNLLVN--ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 279 YRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L +  Y  AID+WS+GCI  E+     LF GKN V Q+  I+ VLG P   ++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 338 H--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
              GA +   Y   L     V  ++        PG+ R                      
Sbjct: 289 QAVGAERVRAYIQSLPPRQPVPWETV------YPGADR---------------------- 320
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                 +   L+ RML ++P  RIS    LRH F  K+
Sbjct: 321 ------QALSLLGRMLRFEPSARISAAAALRHPFLAKY 352

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
           +YE    +G+G++G+V KA D +   + VA+K ++ +      P     ++ V + LE  
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              ++   + V        +  L LVFE +  +L   +      GV     K    QL  
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
            L FL S    ++H DLKP+NIL+ S     IK+ DFG +        L   + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P      G  
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
              +           L +     K   P  K +  I  LG                    
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               KDL+L+ LT++P KRIS  + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+    +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 32  ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 89
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 90  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 137
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  Y+
Sbjct: 138 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGYV 193
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 254 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 292
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 293 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 321

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
           +YE    +G+G++G+V KA D +   + VA+K ++ +      P     ++ V + LE  
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              ++   + V        +  L LVFE +  +L   +      GV     K    QL  
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
            L FL S    ++H DLKP+NIL+ S  +  IK+ DFG +        L   + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P      G  
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
              +           L +     K   P  K +  I  LG                    
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               KDL+L+ LT++P KRIS  + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 62/338 (18%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++      ++ +  +   
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
            Q+   L ++ S +  IIH DLKP N  L   +   +KI+D+G + H    +  Y+ +R+
Sbjct: 132 YQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDYGLARHTDDEMTGYVATRW 187
Query: 279 YRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   LL
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 247
Query: 338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
              S  S   Y   L+               ++P     +  +G +              
Sbjct: 248 KKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV---------- 282
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                    DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 ---------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKK-----PFLNQAQIEV-QLLEKI 163
           +YE    +G+G++G+V KA D +   + VA+K ++ +      P     ++ V + LE  
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              ++   + V        +  L LVFE +  +L   +      GV     K    QL  
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
            L FL S    ++H DLKP+NIL+ S  +  IK+ DFG +        L   + + +YR+
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P      G  
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP------GEE 241
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI--LGVDXXXXXXXXXXXXXHSLAD 399
              +           L +     K   P  K +  I  LG                    
Sbjct: 242 DWPR--------DVALPRQAFHSKSAQPIEKFVTDIDELG-------------------- 273
Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               KDL+L+ LT++P KRIS  + L H +F
Sbjct: 274 ----KDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 54/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
           RYE    +G G++G V KA D      VA+K ++  N +  L  + + EV LL ++   +
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
            H   +  +    T +      + LVFE +  +L   +      G+     K   +Q   
Sbjct: 65  -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
            L FL +    I+H DLKPENIL+ S     +K+ DFG +        L+  + + +YR+
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+PP        
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE------- 232
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
                 D    +  + + +   R  R                            S+   M
Sbjct: 233 ------DDWPRDVSLPRGAFPPRGPR-------------------------PVQSVVPEM 261
Query: 402 K--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           +     L+L MLT++P KRIS    L+H +  K
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  ++
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  ++
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 75
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 76  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 123
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +  ++
Sbjct: 124 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMAGFV 179
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 240 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 278
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 279 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 307

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+ FG + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILGFGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+D G + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDAGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +   +
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMTGXV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+D G + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDRGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 146/333 (43%), Gaps = 54/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
           RYE    +G G++G V KA D      VA+K ++  N +  L  + + EV LL ++   +
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
            H   +  +    T +      + LVFE +  +L   +      G+     K   +Q   
Sbjct: 65  -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRS 281
            L FL +    I+H DLKPENIL+ S     +K+ DFG +        L   + + +YR+
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+PP        
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE------- 232
Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
                 D    +  + + +   R  R                            S+   M
Sbjct: 233 ------DDWPRDVSLPRGAFPPRGPR-------------------------PVQSVVPEM 261
Query: 402 K--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           +     L+L MLT++P KRIS    L+H +  K
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+D G + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDGGLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 99
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 100 HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 147
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DFG + H    +   +
Sbjct: 148 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFGLARHTDDEMXGXV 203
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 264 AELLKKISSESARNYIQSLA---------------QMPKMNFANVFIGANPLAV------ 302
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 303 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 331

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 148/338 (43%), Gaps = 64/338 (18%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQI-EVQLLEKINKAD 167
           RYE    +G G++G V KA D      VA+K ++  N +  L  + + EV LL ++   +
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 168 IHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
            H   +  +    T +      + LVFE +  +L   +      G+     K   +Q   
Sbjct: 65  -HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY-------IQS 276
            L FL +    I+H DLKPENIL+ S     +K+ DFG +      +Y Y       + +
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLA-----RIYSYQMALDPVVVT 174
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
            +YR+PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+PP   
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE-- 232
Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHS 396
                      D    +  + + +   R  R                            S
Sbjct: 233 -----------DDWPRDVSLPRGAFPPRGPR-------------------------PVQS 256
Query: 397 LADYMK--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           +   M+     L+L MLT++P KRIS    L+H +  K
Sbjct: 257 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +++Y     +G+G++G V KA ++  E      I++ K  +   +    E+ +L+++  +
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +I     VKL      K  L LVFE L  +L  L+ +    G+     K F  QL   +A
Sbjct: 61  NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
           +    +  ++H DLKP+N+L+   +   +KI DFG +   G  + +Y   I + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           VL+G   Y   ID+WS+GCI  E+  G PLF G +E DQ+ +I  +LG P        ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
             KY     D ++       T  E LP    L    G+D                     
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+ +ML  DP +RI+    L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 70/342 (20%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K  K  +PF +     +   E++LL+ + 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMK 79
Query: 165 KADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
             ++     + L   FT        N + LV  L+  +L N+++          LT    
Sbjct: 80  HENV-----IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHV 127
Query: 219 Q----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
           Q    Q+   L ++ S +  IIH DLKP N  L   +   +KI+DF  + H    +  Y+
Sbjct: 128 QFLIYQILRGLKYIHSAD--IIHRDLKPSN--LAVNEDCELKILDFYLARHTDDEMTGYV 183
Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +R+YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P 
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 334 GYLLHGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXX 391
             LL   S  S   Y   L+               ++P     +  +G +          
Sbjct: 244 AELLKKISSESARNYIQSLT---------------QMPKMNFANVFIGANPLAV------ 282
Query: 392 XXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                        DL+ +ML  D  KRI+    L H +F ++
Sbjct: 283 -------------DLLEKMLVLDSDKRITAAQALAHAYFAQY 311

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 28/236 (11%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-----NKKPFLNQAQI-EVQLLEKIN 164
           RYE    LG+G F  V KA D      VAIK IK       K  +N+  + E++LL++++
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT----KKFAQQ 220
             +I     + L   F  K+++ LVF+ +  +L  +I++      SL LT    K +   
Sbjct: 71  HPNI-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDN-----SLVLTPSHIKAYMLM 120
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSR 277
               L +L   +  I+H DLKP N+LL   +   +K+ DFG +   G     Y   + +R
Sbjct: 121 TLQGLEYLH--QHWILHRDLKPNNLLL--DENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           +YR+PE+L G   Y + +DMW++GCIL EL    P   G +++DQ+T+I E LG P
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +++Y     +G+G++G V KA ++  E      I++ K  +   +    E+ +L+++  +
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +I     VKL      K  L LVFE L  +L  L+ +    G+     K F  QL   +A
Sbjct: 61  NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
           +    +  ++H DLKP+N+L+   +   +KI DFG +   G  + +Y   + + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           VL+G   Y   ID+WS+GCI  E+  G PLF G +E DQ+ +I  +LG P        ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
             KY     D ++       T  E LP    L    G+D                     
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+ +ML  DP +RI+    L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
           +G G++G V  A+D   + +VA+K  K  +PF       +   E++LL+ +   ++    
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 89
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            + L   FT        + + LV  L+  +L N++++     +S    +    QL   L 
Sbjct: 90  -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGLK 145
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           ++ S    IIH DLKP N+ +   + S ++I+DFG +    + +  Y+ +R+YR+PE++L
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
             + Y+  +D+WS+GCI+ EL  G+ LF G + +DQ+ +I+EV+G P   +L   +K S 
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 258
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
              R             T  + LP    K L +I                 + LA     
Sbjct: 259 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 287
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
            DL+ RML  D  +R+S    L H +F ++
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 50/328 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +++Y     +G+G++G V KA ++  E      I++ K  +   +    E+ +L+++  +
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +I     VKL      K  L LVFE L  +L  L+ +    G+     K F  QL   +A
Sbjct: 61  NI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIA 114
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
           +    +  ++H DLKP+N+L+   +   +KI DFG +   G  + +Y   + + +YR+P+
Sbjct: 115 YCH--DRRVLHRDLKPQNLLIN--REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           VL+G   Y   ID+WS+GCI  E+  G PLF G +E DQ+ +I  +LG P        ++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
             KY     D ++       T  E LP    L    G+D                     
Sbjct: 231 LPKY-----DPNF-------TVYEPLPWESFLK---GLDESGI----------------- 258
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+ +ML  DP +RI+    L H +F
Sbjct: 259 --DLLSKMLKLDPNQRITAKQALEHAYF 284

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 143/342 (41%), Gaps = 57/342 (16%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI------EVQ 158
           G     RYE    +G G++G V KA D      VA+K ++          +      EV 
Sbjct: 4   GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLT 214
           LL ++   + H   +  +    T +      + LVFE +  +L   +      G+     
Sbjct: 64  LLRRLEAFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQ 272
           K   +Q    L FL +    I+H DLKPENIL+ S     +K+ DFG +        L  
Sbjct: 123 KDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMALTP 178
Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
            + + +YR+PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+P
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXX 392
           P              D    +  + + +   R  R                         
Sbjct: 239 PE-------------DDWPRDVSLPRGAFPPRGPR------------------------- 260
Query: 393 XXHSLADYMK--FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
              S+   M+     L+L MLT++P KRIS    L+H +  K
Sbjct: 261 PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 57/330 (17%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           Y   T +G G++G V  A D     +VAIK  K  +PF ++   +    E +    +   
Sbjct: 26  YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQ--------QL 221
            ++ L   FT  + L         N Y+      F    L   +  KF++        Q+
Sbjct: 84  NVIGLLDVFTPASSL--------RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM 135
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS 281
              L ++ S    ++H DLKP N  L   +   +KI+DFG + H    +  Y+ +R+YR+
Sbjct: 136 LKGLKYIHSA--GVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRA 191
Query: 282 PEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           PEV+L  + Y+  +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P        
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP-------- 243
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADY 400
              +++  +L+D      K+  +  + LP + R D                         
Sbjct: 244 --GTEFVQKLND------KAAKSYIQSLPQTPRKDFTQLFPRASPQAA------------ 283
Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
               DL+ +ML  D  KR++    L H FF
Sbjct: 284 ----DLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 150/328 (45%), Gaps = 53/328 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           Y   T +G G++G V  A D     +VAIK  K  +PF ++   +    E +    +   
Sbjct: 44  YVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 172 YIVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
            ++ L   FT  + L       LV   +  +L  ++      G+  +  K      Q+  
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLK 155
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
            L ++ S    ++H DLKP N  L   +   +KI+DFG + H    +  Y+ +R+YR+PE
Sbjct: 156 GLKYIHSA--GVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPE 211
Query: 284 VLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           V+L  + Y+  +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P          
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP---------- 261
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMK 402
            +++  +L+D      K+  +  + LP + R D                           
Sbjct: 262 GTEFVQKLND------KAAKSYIQSLPQTPRKDFTQLFPRASPQAA-------------- 301
Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             DL+ +ML  D  KR++    L H FF
Sbjct: 302 --DLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 162/336 (48%), Gaps = 56/336 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIH 169
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q   +  L E KI  A  H
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 170 SRYI----VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
              I    +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 83  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +   S +KI DFG +        H G  L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TSDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P    L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
           +           L   +Y+L   +   K ++P ++                         
Sbjct: 255 NCGIN-------LKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           AD  K  DL+ +MLT++P KRI     L H +  ++
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
           +G G++G V  A+D   + +VA+K  K  +PF       +   E++LL+ +   ++    
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 89
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            + L   FT        + + LV  L+  +L N+++      +S    +    QL   L 
Sbjct: 90  -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRGLK 145
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           ++ S    IIH DLKP N+ +   + S ++I+DFG +    + +  Y+ +R+YR+PE++L
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVN--EDSELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
             + Y+  +D+WS+GCI+ EL  G+ LF G + +DQ+ +I+EV+G P   +L   +K S 
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 258
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
              R             T  + LP    K L +I                 + LA     
Sbjct: 259 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 287
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
            DL+ RML  D  +R+S    L H +F ++
Sbjct: 288 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 44  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + LV  L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 158 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 267
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 268 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 301
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 302 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 81  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKIXDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 248 --SQEDLNXIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 51/332 (15%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEK 162
           +  +++Y+    +G+G++G V KA D + +  VA+K I+     +   + A  E+ LL+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLK- 74
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
               ++H   IV L      +  L LVFE +  +L  ++ + N  G+  +  K +  QL 
Sbjct: 75  ----ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQLL 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYY 279
             +A     +  I+H DLKP+N+L+ S    A+K+ DFG +   G  +  Y   + + +Y
Sbjct: 130 RGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 280 RSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           R+P+VL+G   Y  ++D+WS+GCI  E+ TG+PLF G  + DQ+ KI  +LG P      
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------ 239
Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
                 + + ++ +   + K+ T    E+ P S  +                        
Sbjct: 240 ----NPREWPQVQELP-LWKQRTFQVFEKKPWSSIIPGFC-------------------- 274
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              +  DL+  ML +DP KRIS  + + H +F
Sbjct: 275 --QEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 51/332 (15%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEK 162
           +  +++Y+    +G+G++G V KA D + +  VA+K I+     +   + A  E+ LL+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAIREISLLK- 74
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
               ++H   IV L      +  L LVFE +  +L  ++ + N  G+  +  K +  QL 
Sbjct: 75  ----ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL-DENKTGLQDSQIKIYLYQLL 129
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYY 279
             +A     +  I+H DLKP+N+L+ S    A+K+ DFG +   G  +  Y   + + +Y
Sbjct: 130 RGVAHCH--QHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 280 RSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           R+P+VL+G   Y  ++D+WS+GCI  E+ TG+PLF G  + DQ+ KI  +LG P      
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------ 239
Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLA 398
                 + + ++ +   + K+ T    E+ P S  +                        
Sbjct: 240 ----NPREWPQVQELP-LWKQRTFQVFEKKPWSSIIPGFC-------------------- 274
Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              +  DL+  ML +DP KRIS  + + H +F
Sbjct: 275 --QEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 81  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 248 --SQEDLNXIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 161/336 (47%), Gaps = 56/336 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIH 169
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q   +  L E KI  A  H
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRH 82
Query: 170 SRYI----VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
              I    +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 83  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 249
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 250 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           AD  K  DL+ +MLT++P KRI     L H +  ++
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 81  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 248 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 32  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 89  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 145
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 146 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 200
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 255
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L       K ++P ++                         
Sbjct: 256 --SQEDLNCIINLKARNYLLSLP---HKNKVPWNRLFPN--------------------- 289
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 290 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 321

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 81  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L       K ++P ++                         
Sbjct: 248 --SQEDLNCIINLKARNYLLSLP---HKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 127/229 (55%), Gaps = 17/229 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINK 165
           +++YE   L+G+GS+G V+K  + +    VAIK      + K     A  E++LL+++  
Sbjct: 24  MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            ++ +   V  K     K    LVFE + + + + +     +G+   + +K+  Q+   +
Sbjct: 84  ENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGI 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSP 282
            F  S   +IIH D+KPENIL+   +   +K+ DFG +      G+     + +R+YR+P
Sbjct: 138 GFCHSH--NIIHRDIKPENILV--SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 283 EVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
           E+L+G + Y  A+D+W++GC++ E+  GEPLF G +++DQ+  I+  LG
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG 242

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 60/335 (17%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY     +G+G++G V  A+DH  K +VAIK I    PF +Q        E+Q+L +   
Sbjct: 44  RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS---PFEHQTYCQRTLREIQILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            ++     +           + +V +L+  +LY L+++     +S +    F  Q+   L
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+L+ +     +KI DFG +        H G  L + + +R+
Sbjct: 158 KYIHS--ANVLHRDLKPSNLLINT--TCDLKICDFGLARIADPEHDHTG-FLTEXVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P    L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 272
Query: 338 HGA--SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXH 395
           +     K   Y   L   + V         +  P S                        
Sbjct: 273 NCIINMKARNYLQSLPSKTKV------AWAKLFPKSDS---------------------- 304
Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 K  DL+ RMLT++P KRI+    L H + 
Sbjct: 305 ------KALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 80
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 81  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 137
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 138 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 192
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 247
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 248 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 281
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 282 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 62/330 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-----LNQAQIEVQLLEKINKADIHSRY 172
           +G G++G V  A+D   + +VA+K  K  +PF       +   E++LL+ +   ++    
Sbjct: 28  VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENV---- 81
Query: 173 IVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            + L   FT        + + LV  L+  +L N+++      +S    +    QL   L 
Sbjct: 82  -IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLLRGLK 137
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           ++ S    IIH DLKP N+ +   +   ++I+DFG +    + +  Y+ +R+YR+PE++L
Sbjct: 138 YIHSA--GIIHRDLKPSNVAVN--EDCELRILDFGLARQADEEMTGYVATRWYRAPEIML 193
Query: 287 G-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK 345
             + Y+  +D+WS+GCI+ EL  G+ LF G + +DQ+ +I+EV+G P   +L   +K S 
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVL---AKISS 250
Query: 346 YFDRLSDNSYVLKKSTDTRKERLP--GSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKF 403
              R             T  + LP    K L +I                 + LA     
Sbjct: 251 EHAR-------------TYIQSLPPMPQKDLSSIF-------------RGANPLA----- 279
Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
            DL+ RML  D  +R+S    L H +F ++
Sbjct: 280 IDLLGRMLVLDSDQRVSAAEALAHAYFSQY 309

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 44  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 100
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 157
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 158 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 212
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 267
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 268 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 301
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 302 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 79  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 190
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 245
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 246 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 279
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 280 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 82
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 83  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 139
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 140 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 194
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 249
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 250 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 283
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 284 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TXDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 86  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 142
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 197
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 252
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 253 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 286
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 287 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 30  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 86
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 87  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 143
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 144 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 198
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 253
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 254 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 287
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 288 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 319

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 21  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 78  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 134
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 135 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 189
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 244
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 245 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 278
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 279 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 310

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 79  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 136 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 190
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 245
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
               +       L   +Y+L   +   K ++P ++                         
Sbjct: 246 --EQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 279
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 280 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
           F DRY+   +LGKGSFG+V+   D     + A+K+I  +  K   ++  +  EVQLL+++
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
           +  +I     +KL   F  K +  LV E+ +   L++ +I    F  V      +  +Q+
Sbjct: 107 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 158
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
              + ++   +  I+H DLKPEN+LL S  + A I+IIDFG S H    + +   I + Y
Sbjct: 159 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 216
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           Y +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+
Sbjct: 217 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
           F DRY+   +LGKGSFG+V+   D     + A+K+I  +  K   ++  +  EVQLL+++
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
           +  +I     +KL   F  K +  LV E+ +   L++ +I    F  V      +  +Q+
Sbjct: 108 DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 159
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
              + ++   +  I+H DLKPEN+LL S  + A I+IIDFG S H    + +   I + Y
Sbjct: 160 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 217
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           Y +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+
Sbjct: 218 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAI+ I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
           F DRY+   +LGKGSFG+V+   D     + A+K+I  +  K   ++  +  EVQLL+++
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
           +  +I     +KL   F  K +  LV E+ +   L++ +I    F  V      +  +Q+
Sbjct: 84  DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 135
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
              + ++   +  I+H DLKPEN+LL S  + A I+IIDFG S H    + +   I + Y
Sbjct: 136 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           Y +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+
Sbjct: 194 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L +Y+ +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLTEYVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
           F +RY I  +LGKGSFG+V+K  D   + + A+K+I NK    N+       EV+LL+K+
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +  +I   + I++    F     L    EL       +I+   F   S +   +  +Q+ 
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
             + ++     +I+H DLKPENILL S ++   IKIIDFG S+C    T +   I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEVL G  YD   D+WS G IL  L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 20/227 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
           F DRY+   +LGKGSFG+V+   D     + A+K+I  +  K   ++  +  EVQLL+++
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKFAQQL 221
           +  +I     +KL   F  K +  LV E+ +   L++ +I    F  V      +  +Q+
Sbjct: 90  DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQV 141
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRY 278
              + ++   +  I+H DLKPEN+LL S  + A I+IIDFG S H    + +   I + Y
Sbjct: 142 LSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 199
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           Y +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+
Sbjct: 200 YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
           F +RY I  +LGKGSFG+V+K  D   + + A+K+I NK    N+       EV+LL+K+
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +  +I   + I++    F     L    EL       +I+   F   S +   +  +Q+ 
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
             + ++     +I+H DLKPENILL S ++   IKIIDFG S+C    T +   I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEVL G  YD   D+WS G IL  L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 19/226 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKI 163
           F +RY I  +LGKGSFG+V+K  D   + + A+K+I NK    N+       EV+LL+K+
Sbjct: 20  FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKL 78
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +  +I   + I++    F     L    EL       +I+   F   S +   +  +Q+ 
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRF---SEHDAARIIKQVF 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFG-SSCHVGQT-LYQYIQSRYY 279
             + ++     +I+H DLKPENILL S ++   IKIIDFG S+C    T +   I + YY
Sbjct: 132 SGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEVL G  YD   D+WS G IL  L +G P F GKNE D + ++
Sbjct: 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 84
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 141
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L + + +R+
Sbjct: 142 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLXEXVATRW 196
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 251
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 252 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 285
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 286 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINK 165
           RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +   
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRH 85
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     +           + +V +L+  +LY L++  +   +S +    F  Q+   L
Sbjct: 86  ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGL 142
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-------HVGQTLYQYIQSRY 278
            ++ S   +++H DLKP N+LL +     +KI DFG +        H G  L + + +R+
Sbjct: 143 KYIHSA--NVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTG-FLXEXVATRW 197
Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P     
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP----- 252
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSL 397
             + +       L   +Y+L   +   K ++P ++                         
Sbjct: 253 --SQEDLNCIINLKARNYLL---SLPHKNKVPWNRLFPN--------------------- 286
Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           AD  K  DL+ +MLT++P KRI     L H + 
Sbjct: 287 AD-SKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 19/231 (8%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKKPFLNQAQI-EVQLLEKIN 164
            +++YE    +G+GS+G V K  + +    VAIK  +     P + +  + E+++L+++ 
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCC 223
             ++     V L   F  K  L LVFE   +  L+ L R     GV  +L K    Q   
Sbjct: 61  HPNL-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQ 113
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLY--QYIQSRYYR 280
           A+ F    + + IH D+KPENIL+   K S IK+ DFG +    G + Y    + +R+YR
Sbjct: 114 AVNFCH--KHNCIHRDVKPENILIT--KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 281 SPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
           SPE+L+G   Y   +D+W++GC+  EL +G PL+ GK++VDQ+  I + LG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI--EVQLLEKI 163
           F DRY+   +LGKGSFG+V+   D     + A+K+I  +  K   ++  +  EVQLL+++
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 164 NKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +  +I   Y   + KG+F     +    EL       +I    F  V      +  +Q+ 
Sbjct: 84  DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD----EIISRKRFSEVD---AARIIRQVL 136
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQSRYY 279
             + +    +  I+H DLKPEN+LL S  + A I+IIDFG S H    +     I + YY
Sbjct: 137 SGITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYY 194
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+
Sbjct: 195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L +YE+   LGKG++G V K+ D      VA+K I +       AQ   + +  + +   
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 169 HSRYIVKLKGHFTWKNH--LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           H   IV L       N   + LVF+ +  +L+ +IR      V     +    QL   + 
Sbjct: 68  HEN-IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVYQLIKVIK 123
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------------CHVGQT--- 269
           +L S  L  +H D+KP NILL +     +K+ DFG S                + +    
Sbjct: 124 YLHSGGL--LHRDMKPSNILLNA--ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 270 -------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
                  L  Y+ +R+YR+PE+LLG   Y   IDMWSLGCIL E+  G+P+F G + ++Q
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILG 379
           + +II V+  P    +   S  S +   + ++   LK+  + R+  +R   +K  + +L 
Sbjct: 240 LERIIGVIDFPSNEDVE--SIQSPFAKTMIES---LKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 380 VDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF 429
           ++                       DL+ ++L ++P KRIS  + L+H F
Sbjct: 295 INPKADCNEEAL-------------DLLDKLLQFNPNKRISANDALKHPF 331

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 30/235 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ-----AQIEVQLLEKINKADIHSRY 172
           +G G++G V  A D     +VAIK  K  +PF ++     A  E++LL+       H R+
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLK-------HMRH 83
Query: 173 --IVKLKGHFTWKNHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             ++ L   FT    L       LV   +  +L  L+++       +        Q+   
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF---LVYQMLKG 140
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
           L ++ +    IIH DLKP N  L   +   +KI+DFG +      +   + +R+YR+PEV
Sbjct: 141 LRYIHAA--GIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEV 196
Query: 285 LLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           +L  + Y   +D+WS+GCI+ E+ TG+ LF G + +DQ+ +I++V G PP   + 
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 18/232 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           + +YE    +G+G++G V KA + E    VA+K ++   + +   + A  E+ LL+++  
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     V+L         L LVFE    +L     + N   +   + K F  QL   L
Sbjct: 61  KNI-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSP 282
            F  S   +++H DLKP+N+L+   +   +K+ +FG +   G  +  Y   + + +YR P
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLIN--RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 283 EVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKIIEVLGMP 332
           +VL G   Y  +IDMWS GCI  EL + G PLF G +  DQ+ +I  +LG P
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 144/330 (43%), Gaps = 69/330 (20%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           LG+G++  V K         VA+K I+  +++     A  EV LL+ +  A+I     V 
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VT 64
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRN----TNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           L      +  L LVFE L  +L   + +     N H V L     F  QL   LA+    
Sbjct: 65  LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-----FLFQLLRGLAYCHRQ 119
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG- 287
           +  ++H DLKP+N+L+   +R  +K+ DFG   +     +T    + + +YR P++LLG 
Sbjct: 120 K--VLHRDLKPQNLLIN--ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PGYLLHGASK 342
             Y   IDMW +GCI  E+ TG PLF G    +Q+  I  +LG P     PG L +   K
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235
Query: 343 TSKYFDRLSDNSYVLKKSTDTRKERLPG-SKRLDTILGVDXXXXXXXXXXXXXHSLADYM 401
           T  Y                 R E L   + RLD+                         
Sbjct: 236 TYNY--------------PKYRAEALLSHAPRLDS------------------------- 256
Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFFL 431
              DL+ ++L ++ + RIS  + ++H FFL
Sbjct: 257 DGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 42/253 (16%)
Query: 96  ENYDY---IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
           E +DY   +++ G +  D Y++   LG+G + +V +A +     +V +KI+K  K   N+
Sbjct: 22  EYWDYASHVVEWGNQ--DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NK 77
Query: 153 AQIEVQLLEK-------INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN 205
            + E+++LE        I  ADI    + +            LVFE         + NT+
Sbjct: 78  IKREIKILENLRGGPNIITLADIVKDPVSRTP---------ALVFEH--------VNNTD 120
Query: 206 FHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
           F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R  +++ID+G
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHRK-LRLIDWG 177
Query: 262 SS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKN 317
            +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +    EP F G +
Sbjct: 178 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 318 EVDQMTKIIEVLG 330
             DQ+ +I +VLG
Sbjct: 238 NYDQLVRIAKVLG 250

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           + +YE    +G+G++G V KA + E    VA+K ++   + +   + A  E+ LL+++  
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            +I     V+L         L LVFE    +L     + N   +   + K F  QL   L
Sbjct: 61  KNI-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSP 282
            F  S   +++H DLKP+N+L+   +   +K+ DFG +   G  +  Y   + + +YR P
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLIN--RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 283 EVLLGIP-YDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKIIEVLGMP 332
           +VL G   Y  +IDMWS GCI  EL +   PLF G +  DQ+ +I  +LG P
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
           +++ +LLG+G++G V  A        VAIK I+  +K  F  +   E+++L+     +I 
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
           + + ++    F   N + ++ EL+  +L+ +I       +S +  + F  Q   A+  L 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
               ++IH DLKP N+L+ S     +K+ DFG           +S   GQ   + +Y+ +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PEV+L    Y  A+D+WS GCIL EL    P+F G++   Q+  I  ++G P   
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
                          SDN     +S   R+        P +        V+         
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      K  DL+ RML +DP KRI+    L H + 
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
           +++ +LLG+G++G V  A        VAIK I+  +K  F  +   E+++L+     +I 
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
           + + ++    F   N + ++ EL+  +L+ +I       +S +  + F  Q   A+  L 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
               ++IH DLKP N+L+ S     +K+ DFG           +S   GQ   + +++ +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PEV+L    Y  A+D+WS GCIL EL    P+F G++   Q+  I  ++G P   
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
                          SDN     +S   R+        P +        V+         
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      K  DL+ RML +DP KRI+    L H + 
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 64/340 (18%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIH 169
           +++ +LLG+G++G V  A        VAIK I+  +K  F  +   E+++L+     +I 
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
           + + ++    F   N + ++ EL+  +L+ +I       +S +  + F  Q   A+  L 
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----------SSCHVGQT--LYQYIQS 276
               ++IH DLKP N+L+ S     +K+ DFG           +S   GQ   + + + +
Sbjct: 130 GS--NVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 277 RYYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PEV+L    Y  A+D+WS GCIL EL    P+F G++   Q+  I  ++G P   
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP--- 242
Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRK-----ERLPGSKRLDTILGVDXXXXXXXXX 390
                          SDN     +S   R+        P +        V+         
Sbjct: 243 --------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP-------- 280
Query: 391 XXXXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      K  DL+ RML +DP KRI+    L H + 
Sbjct: 281 -----------KGIDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L  ++I   LG GSFG+V            A+K++K K+  +   Q+E    E++  + +
Sbjct: 5   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              +I+++ G F     + ++ + +    L++L+R +        + K +A ++C AL +
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEY 121
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S +  II+ DLKPENILL   K   IKI DFG + +V    Y    +  Y +PEV+  
Sbjct: 122 LHSKD--IIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVST 177
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPPGY 335
            PY+ +ID WS G ++ E+  G   F   N +    KI+   L  PP +
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF 226

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG SCH   +    +     Y  PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAIKII  +K          P LN  + E+++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 69  LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAIKII  +K          P LN  + E+++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 69  LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAIKII  +K          P LN  + E+++
Sbjct: 9   DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 67
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 68  LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 118
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 119 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAIKII  +K          P LN  + E+++
Sbjct: 16  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 74
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 75  LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 125
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 126 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAIKII  +K          P LN  + E+++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALN-VETEIEI 68
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 69  LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 119
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 120 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK  +  +
Sbjct: 41  LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 158/385 (41%), Gaps = 101/385 (26%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAI-KIIKNKKPFLNQAQI--EVQLLEKINKA 166
           DRYEI  L+G GS+G V +A+D  EK  VAI KI++  +  ++  +I  E+ +L ++N  
Sbjct: 53  DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            +     + +       + L +V E+   +   L R T  +   L++ K     L   + 
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHI-KTLLYNLLVGVK 170
Query: 227 FLSSPELSIIHCDLKPENILL----------------------------CSPKRSAIKII 258
           ++ S    I+H DLKP N L+                             SP+   + ++
Sbjct: 171 YVHS--AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL----------H 307
            F  + ++ + L  ++ +R+YR+PE +LL   Y  AID+WS+GCI  EL          H
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 308 TGE-PLFSG--------------------KNEVDQMTKIIEVLGMPPGYLLHGASKT-SK 345
               PLF G                    +   DQ+  I  +LG P    +    K  +K
Sbjct: 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK 348
Query: 346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKD 405
            + R+    +  ++ TD   ER P S                          AD +    
Sbjct: 349 RYIRI----FPKREGTDL-AERFPASS-------------------------ADAIH--- 375
Query: 406 LILRMLTYDPKKRISPTNVLRHEFF 430
           L+ RML ++P KRI+    L H FF
Sbjct: 376 LLKRMLVFNPNKRITINECLAHPFF 400

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +EI   LG G+FG+V KA + E     A K+I+ K    ++ ++E  ++E    A     
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           YIVKL G +     L ++ E       + I      G++    +   +Q+  AL FL S 
Sbjct: 77  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL-- 286
              IIH DLK  N+L+       I++ DFG S    +TL +   +I + Y+ +PEV++  
Sbjct: 137 R--IIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  LL  +  +
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 344 SKYFDRLSDNSYVLKKSTDTR 364
            ++ D L      L K+ +TR
Sbjct: 250 VEFRDFL---KIALDKNPETR 267

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    +G GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +   ++++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 22/261 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +EI   LG G+FG+V KA + E     A K+I+ K    ++ ++E  ++E    A     
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHP 68
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           YIVKL G +     L ++ E       + I      G++    +   +Q+  AL FL S 
Sbjct: 69  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLL-- 286
              IIH DLK  N+L+       I++ DFG S    +TL +   +I + Y+ +PEV++  
Sbjct: 129 R--IIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  LL  +  +
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEP---PHHELNPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 344 SKYFDRLSDNSYVLKKSTDTR 364
            ++ D L      L K+ +TR
Sbjct: 242 VEFRDFL---KIALDKNPETR 259

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    +G GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +   ++++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LGKG FG+V    V+A      C+   K    K+     A  E Q+LEK+N     SR+
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-----SRF 245
Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +V L   +  K+ LCLV  L     L +++Y++ +     G        +A ++CC L  
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLED 301
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
           L      I++ DLKPENILL       I+I D G + HV  GQT+   + +  Y +PEV+
Sbjct: 302 LHRER--IVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG------KNEVDQMTKII 326
               Y  + D W+LGC+L E+  G+  F        + EV+++ K +
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAI+II  +K          P LN  + E+++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 193
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 194 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 244
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 245 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQL 159
           D Y +   LG G+ G+V  AF+ +   +VAI+II  +K          P LN  + E+++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALN-VETEIEI 207
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKF 217
           L+K+N        I+K+K  F  +++  +V EL+    L++ ++ N      +  L   +
Sbjct: 208 LKKLNHP-----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKL---Y 258
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT--LYQYI 274
             Q+  A+ +L   E  IIH DLKPEN+LL S +    IKI DFG S  +G+T  +    
Sbjct: 259 FYQMLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 275 QSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFS 314
            +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A +   K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F  + + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S +  +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKK--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      D   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA 233

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LGKG FG+V    V+A      C+   K    K+     A  E Q+LEK+N     SR+
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-----SRF 245
Query: 173 IVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +V L   +  K+ LCLV  L     L +++Y++ +     G        +A ++CC L  
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLED 301
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
           L      I++ DLKPENILL       I+I D G + HV  GQT+   + +  Y +PEV+
Sbjct: 302 LHRER--IVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG------KNEVDQMTKII 326
               Y  + D W+LGC+L E+  G+  F        + EV+++ K +
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 61  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 177
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 178 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 233
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 33  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 92  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 149
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 150 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 205
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    +G GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 177
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 178 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILS 233
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 26  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 84
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 85  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 142
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 143 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 198
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 199 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 237

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E +    +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +    I++L G+F     + L+ E      +Y  ++  +        T  +  +L  AL+
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALS 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
           +  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE++
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
            G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIV 251

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--------NKKPFLNQAQIEVQLLE 161
           DRY+    LG G++G+V+   D     + AIKIIK        N    L+    EV +L+
Sbjct: 4   DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 59
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQ 219
           +++  +I     +KL   F  K +  LV E+     L++ +I    F  V   +  K   
Sbjct: 60  QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 111
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQS 276
           Q+     +L     +I+H DLKPEN+LL S  R A IKI+DFG S H  VG  + + + +
Sbjct: 112 QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            YY +PEVL    YD   D+WS G IL  L  G P F G+ + + + ++
Sbjct: 170 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--------NKKPFLNQAQIEVQLLE 161
           DRY+    LG G++G+V+   D     + AIKIIK        N    L+    EV +L+
Sbjct: 21  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD----EVAVLK 76
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQ 219
           +++  +I     +KL   F  K +  LV E+     L++ +I    F  V   +  K   
Sbjct: 77  QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 128
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCH--VGQTLYQYIQS 276
           Q+     +L     +I+H DLKPEN+LL S  R A IKI+DFG S H  VG  + + + +
Sbjct: 129 QVLSGTTYLHKH--NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            YY +PEVL    YD   D+WS G IL  L  G P F G+ + + + ++
Sbjct: 187 AYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 27  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 85
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 86  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 143
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 144 LHS--LDLIYRDLKPENLLI--DEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 199
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 238

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   K  L +A +E QL  ++  ++ 
Sbjct: 24  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF--KAQLEKAGVEHQLRREVEIQSH 81
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 82  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 138
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 139 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 9   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 66
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 124 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
           K  E   D Y+   +LG G+F +V+ A D   +  VAIK I  K     +  +E  + +L
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
            KI   +I     V L   +    HL L+ +L+S   L++ I    F+  +     +   
Sbjct: 71  HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
           Q+  A+ +L   +L I+H DLKPEN+L  S  + S I I DFG S     G  L     +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++         
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
                  S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 16/223 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           +  ++VKL+  F   ++L +V E      +  +L  + R    H       + +A Q+  
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQIVL 152
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
              +L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE
Sbjct: 153 TFEYLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           ++L   Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 11  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 6   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 63
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 64  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 120
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 121 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 232

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 33  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 90
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 147
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 148 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 4   LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 61
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 62  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 118
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 119 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN-----------KKPFLNQAQI-EVQL 159
           Y +   +  GS+G V    D  E   VAIK + N              FL +  + E++L
Sbjct: 24  YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           L   +  +I     + +       + L LV EL+  +L  +I +     +S    + F  
Sbjct: 83  LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI-VISPQHIQYFMY 141
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQ 275
            +   L  L   E  ++H DL P NILL     + I I DF      +    +T   Y+ 
Sbjct: 142 HILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKT--HYVT 195
Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
            R+YR+PE+++    +   +DMWS GC++ E+   + LF G    +Q+ KI+EV+G P  
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP-- 253
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                     K  D +  +S   +         +P       +   D             
Sbjct: 254 ----------KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL--------- 294
Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                     DLI +ML ++P++RIS    LRH +F
Sbjct: 295 ----------DLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE 
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN-----------KKPFLNQAQI-EVQL 159
           Y +   +  GS+G V    D  E   VAIK + N              FL +  + E++L
Sbjct: 24  YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           L   +  +I     + +       + L LV EL+  +L  +I +     +S    + F  
Sbjct: 83  LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI-VISPQHIQYFMY 141
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLYQYIQ 275
            +   L  L   E  ++H DL P NILL     + I I DF      +    +T   Y+ 
Sbjct: 142 HILLGLHVLH--EAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANKT--HYVT 195
Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
            R+YR+PE+++    +   +DMWS GC++ E+   + LF G    +Q+ KI+EV+G P  
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP-- 253
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                     K  D +  +S   +         +P       +   D             
Sbjct: 254 ----------KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL--------- 294
Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                     DLI +ML ++P++RIS    LRH +F
Sbjct: 295 ----------DLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +   +   +  Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTELCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 33  LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 91
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E +       +L R   F          +A Q+     
Sbjct: 92  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 148
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 149 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       +    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++ KL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++ KL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 158 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 33  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 90
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 147
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 148 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 126
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 127 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   +IE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ ++  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIV 251

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 65
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 122
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 123 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 234

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +    I++L G+F     + L+ E      +Y  ++  +        T  +  +L  AL+
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALS 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
           +  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE++
Sbjct: 128 YCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 183
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
            G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E ++      +L R   F          +A Q+     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 119
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E ++      +L R   F          +A Q+     
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 176
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 177 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E +       +L R   F          +A Q+     
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 156
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 157 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E +       +L R   F          +A Q+     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E +       +L R   F          +A Q+     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 35  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 93
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E ++      +L R   F          +A Q+     
Sbjct: 94  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 150
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 151 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 206
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 246

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E ++      +L R   F          +A Q+     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 68/373 (18%)
Query: 94  DDENYDYIIK---HGEKFLDRYEIDTL-LGKGSFGQVVKAFDHEEKCQV--AIKIIKNKK 147
           D  +YD+ +K     E+  D +E +   +G+G++G V KA   + K     A+K I+   
Sbjct: 1   DKMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG 60
Query: 148 PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
             ++  + E+ LL ++   ++ S   V L  H   K  + L+F+   ++L+++I+   FH
Sbjct: 61  ISMSACR-EIALLRELKHPNVISLQKVFL-SHADRK--VWLLFDYAEHDLWHIIK---FH 113
Query: 208 GVS----------LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAI 255
             S            + K    Q+   + +L +    ++H DLKP NIL+    P+R  +
Sbjct: 114 RASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRV 171
Query: 256 KIIDFG------SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHT 308
           KI D G      S       L   + + +YR+PE+LLG   Y  AID+W++GCI  EL T
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
Query: 309 GEPLFSGKNEV---------DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKK 359
            EP+F  + E          DQ+ +I  V+G P       A K  +   ++ ++S ++K 
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP-------ADKDWEDIKKMPEHSTLMK- 283
Query: 360 STDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRMLTYDPKKRI 419
             D R+        +  +                 H +    K   L+ ++LT DP KRI
Sbjct: 284 --DFRRNTYTNCSLIKYM---------------EKHKVKPDSKAFHLLQKLLTMDPIKRI 326
Query: 420 SPTNVLRHEFFLK 432
           +    ++  +FL+
Sbjct: 327 TSEQAMQDPYFLE 339

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 64
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 121
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 122 SYCHSKR--VIHRDIKPENLLLGSA--GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 14/216 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           ++GKGSFG+V+ A    E+   A+K+++ K     + +  +     +   ++   ++V L
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKF-AQQLCCALAFLSSPEL 233
              F   + L  V + ++     Y+L R   F    L    +F A ++  AL +L S  L
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCF----LEPRARFYAAEIASALGYLHS--L 158
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPY 290
           +I++ DLKPENILL S  +  I + DFG    +     T   +  +  Y +PEVL   PY
Sbjct: 159 NIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           D  +D W LG +L E+  G P F  +N  +    I+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 27/243 (11%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEK 162
           HG     RY     LG G  G V  A D++   +VAIK I    P  +  A  E++++ +
Sbjct: 5   HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 163 INKADIHSRY---------IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
           ++  +I   +         +    G  T  N + +V E +  +L N++           L
Sbjct: 65  LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-------CHV 266
              F  QL   L ++ S   +++H DLKP N+ + + +   +KI DFG +        H 
Sbjct: 125 ---FMYQLLRGLKYIHSA--NVLHRDLKPANLFINT-EDLVLKIGDFGLARIMDPHYSHK 178
Query: 267 GQTLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
           G  L + + +++YRSP +LL  P  Y  AIDMW+ GCI  E+ TG+ LF+G +E++QM  
Sbjct: 179 GH-LSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 325 IIE 327
           I+E
Sbjct: 237 ILE 239

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL+  F   ++L +V E ++      +L R   F          +A Q+     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF---YAAQIVLTFE 155
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +PE++L
Sbjct: 156 YLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  I++ DFG +  V    +    +  Y +PE+++ 
Sbjct: 157 LHS--LDLIYRDLKPENLII--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIIS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 112 YEIDTLLGKGSFG---QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +E+  +LGKG +G   QV K          A+K++K      N         E+    ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
              +IV L   F     L L+ E LS     L       G+ +  T  F   ++  AL  
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEV 284
           L   +  II+ DLKPENI+L    +  +K+ DFG    S H G   + +  +  Y +PE+
Sbjct: 137 LH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
           L+   ++ A+D WSLG ++ ++ TG P F+G+N    + KI++  L +PP
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 112 YEIDTLLGKGSFG---QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +E+  +LGKG +G   QV K          A+K++K      N         E+    ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCCALAF 227
              +IV L   F     L L+ E LS     L       G+ +  T  F   ++  AL  
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEV 284
           L   +  II+ DLKPENI+L    +  +K+ DFG    S H G   + +  +  Y +PE+
Sbjct: 137 LH--QKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
           L+   ++ A+D WSLG ++ ++ TG P F+G+N    + KI++  L +PP
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
           K  E   D Y+   +LG G+F +V+ A D   +  VAIK I  +     +  +E  + +L
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
            KI   +I     V L   +    HL L+ +L+S   L++ I    F+  +     +   
Sbjct: 71  HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
           Q+  A+ +L   +L I+H DLKPEN+L  S  + S I I DFG S     G  L     +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++         
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
                  S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           +  ++ KL+  F   ++L +V E      +  +L  + R    H       + +A Q+  
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH------ARFYAAQIVL 153
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPE 283
              +L S  L +I+ DLKPEN+++   ++  IK+ DFG +  V    +    +  Y +PE
Sbjct: 154 TFEYLHS--LDLIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           ++L   Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +  Y +P ++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 67
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 124
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI +FG S H   +    +     Y  PE+
Sbjct: 125 SYCHSKR--VIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
           + +YE    +G+G+FG+V KA   +   +VA+K  +++N+K   P     +I++ QLL+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            N  ++      K   +   K  + LVF+   ++L  L+ N      +L+  K+  Q L 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
             L ++   +  I+H D+K  N+L+   +   +K+ DFG +                 + 
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I ++ G    
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                 S T + +  + DN  + +K      E + G KR                     
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMKFK---DLILRMLTYDPKKRISPTNVLRHEFF 430
             L  Y++     DLI ++L  DP +RI   + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
           K  E   D Y+   +LG G+F +V+ A D   +  VAIK I  +     +  +E  + +L
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
            KI   +I     V L   +    HL L+ +L+S   L++ I    F+  +     +   
Sbjct: 71  HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
           Q+  A+ +L   +L I+H DLKPEN+L  S  + S I I DFG S     G  L     +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++         
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
                  S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 9   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 66
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANAL 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI +FG S H   +    +     Y  PE+
Sbjct: 124 SYCHSKR--VIHRDIKPENLLLGSA--GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++  GA
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 235

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           IKH +  LD Y+I   LG G+FG V +  +       A K +       +++  E    E
Sbjct: 44  IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKE 98
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQ 220
               + +    +V L   F   N + +++E +S   L+  + + + + +S +   ++ +Q
Sbjct: 99  IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQ 157
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRY 278
           +C  L  +   E + +H DLKPENI+  + + + +K+IDFG + H+   Q++     +  
Sbjct: 158 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 215
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           + +PEV  G P     DMWS+G +   L +G   F G+N+ + +  +
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 262

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
           K  E   D Y+   +LG G+F +V+ A D   +  VAIK I  +     +  +E  + +L
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
            KI   +I     V L   +    HL L+ +L+S   L++ I    F+  +     +   
Sbjct: 71  HKIKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 123
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSC--HVGQTLYQYIQS 276
           Q+  A+ +L   +L I+H DLKPEN+L  S  + S I I DFG S     G  L     +
Sbjct: 124 QVLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++         
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------- 233
Query: 337 LHGASKTSKYFDRLSDNS 354
                  S Y+D +SD++
Sbjct: 234 --EYEFDSPYWDDISDSA 249

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD++E    LG GSFG+V+     E     A+KI+ +K+  +   +IE  L EK     +
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E      +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+++   ++  I++ DFG +  V    +    +  Y +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLMI--DQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
           + +YE    +G+G+FG+V KA   +   +VA+K  +++N+K   P     +I++ QLL+ 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            N  ++      K   +   K  + LVF+   ++L  L+ N      +L+  K+  Q L 
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 134
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
             L ++   +  I+H D+K  N+L+   +   +K+ DFG +                 + 
Sbjct: 135 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I ++ G    
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 246
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                 S T + +  + DN  + +K      E + G KR                     
Sbjct: 247 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 276
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             L  Y++     DLI ++L  DP +RI   + L H+FF
Sbjct: 277 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
           + +YE    +G+G+FG+V KA   +   +VA+K  +++N+K   P     +I++ QLL+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            N  ++      K   +   K  + LVF+   ++L  L+ N      +L+  K+  Q L 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
             L ++   +  I+H D+K  N+L+   +   +K+ DFG +                 + 
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I ++ G    
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                 S T + +  + DN  + +K      E + G KR                     
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             L  Y++     DLI ++L  DP +RI   + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+L+    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVLIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ ++I   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 11  LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G P F      +   +I  V    P ++  GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
           D +EI   LG G+FG+V KA + E     A K+I  K +  L    +E+ +L   +  +I
Sbjct: 37  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
                VKL   F ++N+L ++ E  +    + +       ++ +  +   +Q   AL +L
Sbjct: 97  -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
              +  IIH DLK  NIL        IK+ DFG S    +T+ +   +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +       PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  L   +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
             +S + D L      L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+ +K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +  ++VKL+  F   ++L +V E ++   +++ +R       S    + +A Q+     +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG 287
           L S  L +I+ DLKPEN+L+   ++  I++ DFG +  V    +    +    +PE++L 
Sbjct: 157 LHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILS 212
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y+ A+D W+LG ++ E+  G P F     +    KI+
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           IKH +  LD Y+I   LG G+FG V +  +       A K +       +++  E    E
Sbjct: 150 IKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKE 204
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQ 220
               + +    +V L   F   N + +++E +S   L+  + + + + +S +   ++ +Q
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQ 263
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRY 278
           +C  L  +   E + +H DLKPENI+  + + + +K+IDFG + H+   Q++     +  
Sbjct: 264 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 321
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           + +PEV  G P     DMWS+G +   L +G   F G+N+ + +  +
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 56/339 (16%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK--IIKNKK---PFLNQAQIEV-QLLEK 162
           + +YE    +G+G+FG+V KA   +   +VA+K  +++N+K   P     +I++ QLL+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            N  ++      K   +   K  + LVF+   ++L  L+ N      +L+  K+  Q L 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLL 135
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
             L ++   +  I+H D+K  N+L+   +   +K+ DFG +                 + 
Sbjct: 136 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I ++ G    
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG---- 247
Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXX 394
                 S T + +  + DN  + +K      E + G KR                     
Sbjct: 248 ------SITPEVWPNV-DNYELYEKL-----ELVKGQKR------------------KVK 277
Query: 395 HSLADYMK---FKDLILRMLTYDPKKRISPTNVLRHEFF 430
             L  Y++     DLI ++L  DP +RI   + L H+FF
Sbjct: 278 DRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG 249

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           L+ ++I   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  ++  ++ 
Sbjct: 11  LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSH 68
Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +    I++L G+F    + +L L +  L      L + + F       T  +  +L  AL
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF---DEQRTATYITELANAL 125
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
           ++  S    +IH D+KPEN+LL S     +KI DFG S H   +    +     Y  PE+
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  +D  +D+WSLG +  E   G P F      +   +I  V    P ++  GA
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 167
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 168 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLG 248

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 168
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 169 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLG 249

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 117 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 174
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 175 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 233
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 234 KEPFFHGHDNYDQLVRIAKVLG 255

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  ++  AL +  S  + I+H D+KP N+++    R
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS--MGIMHRDVKPHNVMIDHEHR 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ +I +VLG
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLG 250

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKI- 163
           GEK  D +++  LLGKGSF  V +A       +VAIK+I  K      A  +  +++++ 
Sbjct: 7   GEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK------AMYKAGMVQRVQ 59
Query: 164 NKADIHSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           N+  IH +     I++L  +F   N++ LV E+      N          S N  + F  
Sbjct: 60  NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQS 276
           Q+   + +L S    I+H DL   N+LL   +   IKI DFG +  +    +  Y    +
Sbjct: 120 QIITGMLYLHSH--GILHRDLTLSNLLLT--RNMNIKIADFGLATQLKMPHEKHYTLCGT 175
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             Y SPE+     + L  D+WSLGC+   L  G P F      + + K++
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 99  DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQI 155
           ++++    KF D Y++   LGKG+F  V +        + A KII  KK       + + 
Sbjct: 18  EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
           E ++  K+   +I     V+L      ++   LVF+L++   L+  I    F+  S    
Sbjct: 78  EARICRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADA 130
Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLY 271
               QQ+  ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  +
Sbjct: 131 SHCIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
            +  +  Y SPEVL   PY   +D+W+ G IL  L  G P F
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
           D +EI   LG G+FG+V KA + E     A K+I  K +  L    +E+ +L   +  +I
Sbjct: 37  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
                VKL   F ++N+L ++ E  +    + +       ++ +  +   +Q   AL +L
Sbjct: 97  -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
              +  IIH DLK  NIL        IK+ DFG S    + + +   +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +       PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  L   +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
             +S + D L      L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADI 168
           D +EI   LG G+FG+V KA + E     A K+I  K +  L    +E+ +L   +  +I
Sbjct: 37  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
                VKL   F ++N+L ++ E  +    + +       ++ +  +   +Q   AL +L
Sbjct: 97  -----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
              +  IIH DLK  NIL        IK+ DFG S    + + +   +I + Y+ +PEV+
Sbjct: 152 HDNK--IIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 286 L-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +       PYD   D+WSLG  L+E+   EP     +E++ M  ++++    P  L   +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLLKIAKSEPPTLAQPS 264
Query: 341 SKTSKYFDRLSDNSYVLKKSTDTR 364
             +S + D L      L+K+ D R
Sbjct: 265 RWSSNFKDFLKK---CLEKNVDAR 285

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
           +K G +  D  ++E+  +LG+GSFG+V  VK     +  Q+ A+K++K     +    + 
Sbjct: 14  VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
           ++E  +L ++N       +IVKL   F  +  L L+ + L   +L+  L +   F   + 
Sbjct: 74  KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 125
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
              K +  +L  AL  L S  L II+ DLKPENILL   +   IK+ DFG    S    +
Sbjct: 126 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 181
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             Y +  +  Y +PEV+    +  + D WS G ++ E+ TG   F GK+  + MT I++ 
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 329 -LGMP 332
            LGMP
Sbjct: 242 KLGMP 246

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
           +K G +  D  ++E+  +LG+GSFG+V  VK     +  Q+ A+K++K     +    + 
Sbjct: 14  VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
           ++E  +L ++N       +IVKL   F  +  L L+ + L   +L+  L +   F   + 
Sbjct: 74  KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 125
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
              K +  +L  AL  L S  L II+ DLKPENILL   +   IK+ DFG    S    +
Sbjct: 126 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 181
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             Y +  +  Y +PEV+    +  + D WS G ++ E+ TG   F GK+  + MT I++ 
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 329 -LGMP 332
            LGMP
Sbjct: 242 KLGMP 246

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 26/245 (10%)
Query: 102 IKHGEKFLD--RYEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLN---QA 153
           +K G +  D  ++E+  +LG+GSFG+V  VK     +  Q+ A+K++K     +    + 
Sbjct: 15  VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSL 211
           ++E  +L ++N       +IVKL   F  +  L L+ + L   +L+  L +   F   + 
Sbjct: 75  KMERDILVEVNHP-----FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TE 126
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQ 268
              K +  +L  AL  L S  L II+ DLKPENILL   +   IK+ DFG    S    +
Sbjct: 127 EDVKFYLAELALALDHLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKESIDHEK 182
Query: 269 TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             Y +  +  Y +PEV+    +  + D WS G ++ E+ TG   F GK+  + MT I++ 
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 329 -LGMP 332
            LGMP
Sbjct: 243 KLGMP 247

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           +D ++I   LGKG FG V  A + + K  +A+K++   +  L +  +E QL  +I  ++ 
Sbjct: 14  IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
           +    I+++  +F  +  + L+ E        L +    HG      +  F ++L  AL 
Sbjct: 72  LRHPNILRMYNYFHDRKRIYLMLEFAPRG--ELYKELQKHGRFDEQRSATFMEELADALH 129
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
           +    E  +IH D+KPEN+L+    +  +KI DFG S H      + +     Y  PE++
Sbjct: 130 YCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 185
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
            G  +D  +D+W  G +  E   G P F   +  +   +I+ V L  PP
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 234

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 15/232 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIE--VQLL 160
           K  E     +E    LG G+F +VV A +       A+K I  K     ++ IE  + +L
Sbjct: 15  KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQ 219
            KI   +I     V L+  +   NHL LV +L+S   L++ I    F+  +        +
Sbjct: 75  RKIKHENI-----VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIR 127
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVGQ--TLYQYIQS 276
           Q+  A+ +L    + I+H DLKPEN+L  S  + S I I DFG S   G+   +     +
Sbjct: 128 QVLDAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++ 
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA 237

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 29/240 (12%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQIEV 157
           ++  +Y   + LG G+FG V  A D E+  +V +K IK +K         P L +  +E+
Sbjct: 21  EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 158 QLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKK 216
            +L ++  A+     I+K+   F  +    LV E     L +L    + H  +   L   
Sbjct: 81  AILSRVEHAN-----IIKVLDIFENQGFFQLVMEKHGSGL-DLFAFIDRHPRLDEPLASY 134
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYI 274
             +QL  A+ +L   +  IIH D+K ENI++   +   IK+IDFGS+ ++  G+  Y + 
Sbjct: 135 IFRQLVSAVGYLRLKD--IIHRDIKDENIVIA--EDFTIKLIDFGSAAYLERGKLFYTFC 190
Query: 275 QSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            +  Y +PEVL+G PY    ++MWSLG   V L+T   L   +N   ++ + +E    PP
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLG---VTLYT---LVFEENPFCELEETVEAAIHPP 244

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  I NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++   ++
Sbjct: 118 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 174
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H  Q     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 175 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 234
Query: 309 GEPLFSGKNEVDQMTKIIEVLGMPP--GYL 336
            EP F G++  DQ+ +I +VLG     GYL
Sbjct: 235 REPFFHGQDNYDQLVRIAKVLGTEELYGYL 264

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 13/150 (8%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  I NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++   ++
Sbjct: 113 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSK--GIMHRDVKPHNVMI-DHQQ 169
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H  Q     + SRY++ PE+L+    YD ++DMWSLGC+L  +   
Sbjct: 170 KKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 229
Query: 309 GEPLFSGKNEVDQMTKIIEVLGMPP--GYL 336
            EP F G++  DQ+ +I +VLG     GYL
Sbjct: 230 REPFFHGQDNYDQLVRIAKVLGTEELYGYL 259

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
           KF D Y++   LGKG+F  V +        + A KII  KK       + + E ++  K+
Sbjct: 3   KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
              +I     V+L      ++   LVF+L++   L+  I    F+  S        QQ+ 
Sbjct: 63  QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 115
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  + +  +  Y
Sbjct: 116 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            SPEVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
           KF D Y++   LGKG+F  V +        + A KII  KK       + + E ++  K+
Sbjct: 3   KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
              +I     V+L      ++   LVF+L++   L+  I    F+  S        QQ+ 
Sbjct: 63  QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 115
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  + +  +  Y
Sbjct: 116 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            SPEVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           +D ++I   LGKG FG V  A + + K  +A+K++   +  L +  +E QL  +I  ++ 
Sbjct: 13  IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
           +    I+++  +F  +  + L+ E        L +    HG      +  F ++L  AL 
Sbjct: 71  LRHPNILRMYNYFHDRKRIYLMLEFAPRG--ELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
           +    E  +IH D+KPEN+L+    +  +KI DFG S H      + +     Y  PE++
Sbjct: 129 YCH--ERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
            G  +D  +D+W  G +  E   G P F   +  +   +I+ V L  PP
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 76  NETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK 135
           N+ +    E  Y  + G +DE  D+     ++F  +Y+   ++G+G    V +       
Sbjct: 62  NDAQPKGTENLYFQSMGPEDELPDWAA--AKEFYQKYDPKDVIGRGVSSVVRRCVHRATG 119
Query: 136 CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK-LKGH---------FTWKNH 185
            + A+KI++     L+  Q     LE++ +A     +I++ + GH         +   + 
Sbjct: 120 HEFAVKIMEVTAERLSPEQ-----LEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174
Query: 186 LCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
           + LVF+L+    L++ +  T    +S   T+   + L  A++FL +   +I+H DLKPEN
Sbjct: 175 MFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKPEN 230
Query: 245 ILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL------LGIPYDLAIDM 296
           ILL       I++ DFG SCH+  G+ L +   +  Y +PE+L          Y   +D+
Sbjct: 231 ILL--DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 297 WSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           W+ G IL  L  G P F  + ++  +  I+E
Sbjct: 289 WACGVILFTLLAGSPPFWHRRQILMLRMIME 319

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKI 163
           KF D Y++   LGKG+F  V +        + A KII  KK       + + E ++  K+
Sbjct: 2   KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
              +I     V+L      ++   LVF+L++   L+  I    F+  S        QQ+ 
Sbjct: 62  QHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQIL 114
Query: 223 CALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  + +  +  Y
Sbjct: 115 ESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 172
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            SPEVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 211

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  +  VAIKII  +  +  +   Q E+ +L + +     S Y+ K
Sbjct: 31  IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SSYVTK 85
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             G +   + L ++ E L   +  +L+R   F    +    K   ++   L +L S +  
Sbjct: 86  YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKK- 141
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
            IH D+K  N+LL   ++  +K+ DFG +  +  T  +   ++ + ++ +PEV+    YD
Sbjct: 142 -IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 292 LAIDMWSLGCILVELHTGEP 311
              D+WSLG   +EL  GEP
Sbjct: 199 SKADIWSLGITAIELAKGEP 218

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F D YE+  ++GKG+F  V +  + E   Q A+KI+   K F +   +  + L++  +A 
Sbjct: 22  FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 78
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
           I       +IV+L   ++    L +VFE +      + +++  +   V S  +   + +Q
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
           +  AL +    + +IIH D+KPEN+LL S + SA +K+ DFG +  +G++       + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGT 196
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            ++ +PEV+   PY   +D+W  G IL  L +G   F G  E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 18/217 (8%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +LG G FGQV K  +     ++A KIIK +      + + E+ ++ +++ A++     ++
Sbjct: 96  ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL-----IQ 150
Query: 176 LKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           L   F  KN + LV E +    L++ I + +++   L+ T  F +Q+C  +  +   ++ 
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD-TILFMKQICEGIRHMH--QMY 207
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDL 292
           I+H DLKPENIL  +     IKIIDFG +      + L     +  + +PEV   + YD 
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV---VNYDF 264
Query: 293 A---IDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                DMWS+G I   L +G   F G N+ + +  I+
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +E+  L+G G++GQV K    +     AIK++        + + E+ +L+K +    H R
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHR 81
Query: 172 YIVKLKGHFTWKN------HLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            I    G F  KN       L LV E   + ++ +LI+NT  + +         +++   
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
           L+ L   +  +IH D+K +N+LL   + + +K++DFG S  + +T+ +   +I + Y+ +
Sbjct: 142 LSHLH--QHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 282 PEVLL-----GIPYDLAIDMWSLGCILVELHTGEP 311
           PEV+         YD   D+WSLG   +E+  G P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 18/230 (7%)
Query: 112 YEIDTLLGKGSFGQV--VKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +E+  +LG+GSFG+V  V+     +   + A+K++K K     + ++  ++ E+   AD+
Sbjct: 30  FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKM-ERDILADV 87
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCALA 226
           +  ++VKL   F  +  L L+ + L   +L+  L +   F   +    K +  +L   L 
Sbjct: 88  NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF---TEEDVKFYLAELALGLD 144
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPE 283
            L S  L II+ DLKPENILL   +   IK+ DFG S       +  Y +  +  Y +PE
Sbjct: 145 HLHS--LGIIYRDLKPENILL--DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMP 332
           V+    +  + D WS G ++ E+ TG   F GK+  + MT I++  LGMP
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 127 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 184
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 185 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 243
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 244 KEPFFYGHDNHDQLVKIAKVLG 265

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 107 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 164
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 165 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 223
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 224 KEPFFYGHDNHDQLVKIAKVLG 245

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 108 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 165
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 166 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 224
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 225 KEPFFYGHDNHDQLVKIAKVLG 246

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +E   LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   
Sbjct: 7   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 63
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +SR  ++  LK  F   + LC V E  +     ++L R   F   S +  + +  ++  A
Sbjct: 64  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 120
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           L +L S E ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +
Sbjct: 121 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
           PEVL    Y  A+D W LG ++ E+  G  P ++  +E
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 197 LYNLIRNTNFHGVSLNLT----KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           ++  + NT+F  +   LT    + +  +L  AL +  S    I+H D+KP N+++    R
Sbjct: 106 IFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHELR 163
Query: 253 SAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVEL-HT 308
             +++ID+G +   H G+     + SRY++ PE+L+ +  YD ++DMWSLGC+   +   
Sbjct: 164 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFR 222
Query: 309 GEPLFSGKNEVDQMTKIIEVLG 330
            EP F G +  DQ+ KI +VLG
Sbjct: 223 KEPFFYGHDNHDQLVKIAKVLG 244

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +E   LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   
Sbjct: 9   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 65
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +SR  ++  LK  F   + LC V E  +     ++L R   F   S +  + +  ++  A
Sbjct: 66  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 122
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           L +L S E ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +
Sbjct: 123 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
           PEVL    Y  A+D W LG ++ E+  G  P ++  +E
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +E   LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   
Sbjct: 8   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 64
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +SR  ++  LK  F   + LC V E  +     ++L R   F   S +  + +  ++  A
Sbjct: 65  NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 121
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           L +L S E ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +
Sbjct: 122 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
           PEVL    Y  A+D W LG ++ E+  G  P ++  +E
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +E   LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 206
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +SR  ++  LK  F   + LC V E  +     ++L R   F   S +  + +  ++  A
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 263
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           L +L S E ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +
Sbjct: 264 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
           PEVL    Y  A+D W LG ++ E+  G  P ++  +E
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 17/218 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +E   LLGKG+FG+V+   +       A+KI+K K+  + + ++   L E  N+   
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTE--NRVLQ 203
Query: 169 HSR--YIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           +SR  ++  LK  F   + LC V E  +     ++L R   F   S +  + +  ++  A
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSA 260
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRS 281
           L +L S E ++++ DLK EN++L   K   IKI DFG        G T+  +  +  Y +
Sbjct: 261 LDYLHS-EKNVVYRDLKLENLML--DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNE 318
           PEVL    Y  A+D W LG ++ E+  G  P ++  +E
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKA 166
           +D +E   +LGKGSFG+V+ A   E     A+K++K K   L    +E  + EK  ++ A
Sbjct: 22  IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECTMTEKRILSLA 80
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             H  ++ +L   F   + L  V E ++    ++++ ++  F        + +A ++  A
Sbjct: 81  RNHP-FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR---ARFYAAEIISA 136
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHVGQTLYQYIQSRYYR 280
           L FL   +  II+ DLK +N+LL        K+ DFG      C+ G T   +  +  Y 
Sbjct: 137 LMFLH--DKGIIYRDLKLDNVLL--DHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYI 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PE+L  + Y  A+D W++G +L E+  G   F  +NE D    I+    + P +L   A
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA 251
Query: 341 SKTSKYF 347
           +   K F
Sbjct: 252 TGILKSF 258

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D  +   VA+K+++    + P F  + + E Q    +N 
Sbjct: 12  DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 72  PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NIL+ +   +A+K++DFG       S   V QT    
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANILISA--TNAVKVVDFGIARAIADSGNSVXQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
                G S
Sbjct: 240 SARHEGLS 247

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN----LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 16/217 (7%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKA 166
           ++ +E+  +LGKGSFG+V  A   +     AIK +K K   L    +E  ++EK  ++ A
Sbjct: 17  IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLA 75
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             H  ++  +   F  K +L  V E L+    +Y++    + H   L+    +A ++   
Sbjct: 76  WEHP-FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILG 131
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQT-LYQYIQSRYYRS 281
           L FL S    I++ DLK +NILL   K   IKI DFG      +G     ++  +  Y +
Sbjct: 132 LQFLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           PE+LLG  Y+ ++D WS G +L E+  G+  F G++E
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 224

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LG+G FG+V    +KA      C+   K    K+     A +E ++L K+     HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           IV L   F  K  LCLV  +++     Y++YN+  + +  G        +  Q+   L  
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
           L   + +II+ DLKPEN+LL       I  +        GQT  + Y  +  + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           G  YD ++D ++LG  L E+      F  + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 70  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 124
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL   +   I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 125 LHGK--GIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 91  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 71  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 125
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL   +   I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 126 LHGK--GIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LG+G FG+V    +KA      C+   K    K+     A +E ++L K+     HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           IV L   F  K  LCLV  +++     Y++YN+  + +  G        +  Q+   L  
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
           L   + +II+ DLKPEN+LL       I  +        GQT  + Y  +  + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           G  YD ++D ++LG  L E+      F  + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LG+G FG+V    +KA      C+   K    K+     A +E ++L K+     HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           IV L   F  K  LCLV  +++     Y++YN+  + +  G        +  Q+   L  
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
           L   + +II+ DLKPEN+LL       I  +        GQT  + Y  +  + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           G  YD ++D ++LG  L E+      F  + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 68  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 122
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 123 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 69  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 123
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 124 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 94  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 149 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 91  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 93  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 148 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 94  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 149 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 91  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQL 159
           +K G  + D Y+I   LG G+FG V +  +         K I    P L++  +  E+ +
Sbjct: 44  VKQGSVY-DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISI 101
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
           + ++     H   ++ L   F  K  + L+ E LS   L++ I   ++  +S      + 
Sbjct: 102 MNQL-----HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYM 155
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQS 276
           +Q C  L  +   E SI+H D+KPENI+  + K S++KIIDFG +  +   + +     +
Sbjct: 156 RQACEGLKHMH--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
             + +PE++   P     DMW++G +   L +G   F+G+++++ +  +
Sbjct: 214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A +     QVA+K +  +K    Q + E+   E +   D H   +V + 
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T  +   +         +  AL++L +    +I
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---ATVCLSVLRALSYLHNQ--GVI 163
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL S  R  IK+ DFG    V + + +    + + Y+ +PEV+  +PY   
Sbjct: 164 HRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           +D+WSLG +++E+  GEP +  +  +  M +I + L  PP
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSL--PP 259

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 75  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 129
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 130 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 96  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 150
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 151 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 90  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 145 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 90  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 145 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D  +   VA+K+++    + P F  + + E Q    +N 
Sbjct: 12  DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 72  PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NI++ +   +A+K++DFG       S   V QT    
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
                G S
Sbjct: 240 SARHEGLS 247

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 117 LLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           +LG+G FG+V    +KA      C+   K    K+     A +E ++L K+     HSR+
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRF 246
Query: 173 IVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           IV L   F  K  LCLV  +++     Y++YN+  + +  G        +  Q+   L  
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV--DEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVLL 286
           L   + +II+ DLKPEN+LL       I  +        GQT  + Y  +  + +PE+LL
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           G  YD ++D ++LG  L E+      F  + E
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR-YIVKL 176
           LG G++G+V+   D     + AIKII+      +      +LLE++    +     I+KL
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS---KLLEEVAVLKLLDHPNIMKL 101
Query: 177 KGHFTWKNHLCLVFELL-SYNLYN-LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
              F  K +  LV E      L++ +I    F+ V   +  K   Q+   + +L     +
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYLHKH--N 156
Query: 235 IIHCDLKPENILLCSPKRSA-IKIIDFGSSC--HVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           I+H DLKPEN+LL S ++ A IKI+DFG S      + + + + + YY +PEVL    YD
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYD 215
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
              D+WS+G IL  L  G P F G+ + + + K+
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           ++Y I   LG+G FG V +  +   K     K +K K       + E+ +L   N A   
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISIL---NIA--R 59
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            R I+ L   F     L ++FE +S  +++  I NT+   ++      +  Q+C AL FL
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFL 118
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
            S  +   H D++PENI+  + + S IKII+FG +  +  G        +  Y +PEV  
Sbjct: 119 HSHNIG--HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 287 GIPYDLAIDMWSLGCILVELHTG-EPLFSGKNE 318
                 A DMWSLG ++  L +G  P  +  N+
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  K  VAIKII  +  +  +   Q E+ +L + +     S YI +
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYITR 81
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK----------KFAQQLCCAL 225
             G +     L ++ E L              G +L+L K             +++   L
Sbjct: 82  YFGSYLKSTKLWIIMEYLG------------GGSALDLLKPGPLEETYIATILREILKGL 129
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSP 282
            +L S     IH D+K  N+LL   ++  +K+ DFG +  +  T  +   ++ + ++ +P
Sbjct: 130 DYLHSERK--IHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEP 311
           EV+    YD   D+WSLG   +EL  GEP
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEP 214

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF   V A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +FT+++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 91  FFVKL--YFTFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D      VA+K+++    + P F  + + E Q    +N 
Sbjct: 12  DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 72  PAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NI++ +   +A+K++DFG       S   V QT    
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
                G S
Sbjct: 240 SARHEGLS 247

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F   Y++   LGKG+F  V +        + A KII  KK      Q +++   +I +  
Sbjct: 20  FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-KLEREARICRLL 78
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   IV+L    + + H  L+F+L++   L+  I    ++  S        QQ+  A+ 
Sbjct: 79  KHPN-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAV- 134
Query: 227 FLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSP 282
            L   ++ ++H DLKPEN+LL S  K +A+K+ DFG +  V    Q  + +  +  Y SP
Sbjct: 135 -LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 193
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           EVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 194 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 229

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D  +   VA+K+++    + P F  + + E Q    +N 
Sbjct: 12  DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 72  PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NI++ +   +A+K++DFG       S   V QT    
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G +
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIH 169
           E++ ++G+G+FG V KA    +   VAIK I++   +K F+    +E++ L ++N  +I 
Sbjct: 11  EVEEVVGRGAFGVVCKAKWRAK--DVAIKQIESESERKAFI----VELRQLSRVNHPNI- 63
Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRN-------TNFHGVSLNLTKKFAQQL 221
               VKL G     N +CLV E     +LYN++         T  H +S  L      Q 
Sbjct: 64  ----VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL------QC 111
Query: 222 CCALAFLSSPEL-SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
              +A+L S +  ++IH DLKP N+LL +   + +KI DFG++C +   +     S  + 
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWM 170
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           +PEV  G  Y    D++S G IL E+ T
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVIT 198

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIH 169
           E++ ++G+G+FG V KA    +   VAIK I++   +K F+    +E++ L ++N  +I 
Sbjct: 12  EVEEVVGRGAFGVVCKAKWRAK--DVAIKQIESESERKAFI----VELRQLSRVNHPNI- 64
Query: 170 SRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRN-------TNFHGVSLNLTKKFAQQL 221
               VKL G     N +CLV E     +LYN++         T  H +S  L      Q 
Sbjct: 65  ----VKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL------QC 112
Query: 222 CCALAFLSSPEL-SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR 280
              +A+L S +  ++IH DLKP N+LL +   + +KI DFG++C +   +     S  + 
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWM 171
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           +PEV  G  Y    D++S G IL E+ T
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVIT 199

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +   
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           + VKL  +F +++   L F L SY     L   IR           T+ +  ++  AL +
Sbjct: 98  FFVKL--YFCFQDDEKLYFGL-SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 152
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-----YIQSRYYRSP 282
           L      IIH DLKPENILL       I+I DFG++  +     Q     ++ +  Y SP
Sbjct: 153 LHGK--GIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E+L       + D+W+LGCI+ +L  G P F   NE     KII++
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 254

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
           +LGKGSFG+V+ +         A+KI+K K   +    +E  ++EK +        ++ +
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85
Query: 176 LKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           L   F   + L  V E      L Y++  + R    H V       +A ++   L FL S
Sbjct: 86  LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQS 139
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
               II+ DLK +N++L S     IKI DFG    +   G T   +  +  Y +PE++  
Sbjct: 140 K--GIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            PY  ++D W+ G +L E+  G+  F G++E +    I+E
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D      VA+K+++    + P F  + + E Q    +N 
Sbjct: 12  DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 72  PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 124
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NI++ +   +A+K++DFG       S   V QT    
Sbjct: 125 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 179
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 239
Query: 334 GYLLHGAS 341
                G S
Sbjct: 240 SARHEGLS 247

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
           K GE   D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L
Sbjct: 18  KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 77
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N     S YIV   G F     + +  E +   +L  +++      +   +  K + 
Sbjct: 78  HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 130
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
            +   L +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R 
Sbjct: 131 AVIKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 187
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           Y SPE L G  Y +  D+WS+G  LVE+  G  P+ SG   +     +  ++  PP  L 
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLP 247
Query: 338 HGA 340
            G 
Sbjct: 248 SGV 250

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 119/289 (41%), Gaps = 70/289 (24%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           K  D YEI  L+G+GS+G V  A+D      VAIK +      L   +  ++ +  +N+ 
Sbjct: 25  KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR- 83
Query: 167 DIHSRYIVKLKGHFTWK-----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
            + S YI++L      +     + L +V E+   +L  L +   F  ++    K     L
Sbjct: 84  -LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNL 140
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------------- 267
                F+   E  IIH DLKP N LL   +  ++KI DFG +  +               
Sbjct: 141 LLGEKFIH--ESGIIHRDLKPANCLL--NQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 268 --------------QTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL------ 306
                         + L  ++ +R+YR+PE +LL   Y  +ID+WS GCI  EL      
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
Query: 307 HTGE-----PLFSG-----------------KNEVDQMTKIIEVLGMPP 333
           H        PLF G                 K+  DQ+  I  V+G PP
Sbjct: 257 HINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPP 305

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 28/240 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKP-FLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D      VA+K+++    + P F  + + E Q    +N 
Sbjct: 29  DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL--- 221
             I + Y    +          +V E +    L +++           +T K A ++   
Sbjct: 89  PAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIAD 141
Query: 222 -CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLYQY 273
            C AL F  S +  IIH D+KP NI++ +   +A+K++DFG       S   V QT    
Sbjct: 142 ACQALNF--SHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTA-AV 196
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 256

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQ--AQIEVQ 158
           E F   Y +  LLGKG FG V       ++ QVAIK+I   +     P  +     +EV 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE--LLSYNLYNLIRNTNFHGVSLNLTKK 216
           LL K+     H   +++L   F  +    LV E  L + +L++ I      G     ++ 
Sbjct: 87  LLWKVGAGGGHPG-VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE--GPSRC 143
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQ 275
           F  Q+  A+    S    ++H D+K ENIL+   +R   K+IDFGS   +    Y  +  
Sbjct: 144 FFGQVVAAIQHCHS--RGVVHRDIKDENILI-DLRRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 276 SRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +R Y  PE +    Y  L   +WSLG +L ++  G+  F    E+
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI-HSRYIVK 175
           +LGKGSFG+V+ A     +   AIKI+K K   +    +E  ++EK   A +    ++ +
Sbjct: 26  VLGKGSFGKVMLADRKGTEELYAIKILK-KDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 176 LKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           L   F   + L  V E ++    +Y++ +   F          +A ++   L FL   + 
Sbjct: 85  LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF---YAAEISIGLFFLH--KR 139
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHV--GQTLYQYIQSRYYRSPEVLLGIPY 290
            II+ DLK +N++L S     IKI DFG    H+  G T  ++  +  Y +PE++   PY
Sbjct: 140 GIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
             ++D W+ G +L E+  G+P F G++E +    I+E
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
           D YE+   LG G F  V K        + A K IK ++   ++  +  + +E+ +N   +
Sbjct: 26  DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I    I+ L   F  K  + L+ EL+S   L++ +       ++ +   +F +Q+   + 
Sbjct: 86  IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
           +L S  ++  H DLKPENI+L         IK+IDFG +     G        +  + +P
Sbjct: 144 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E++   P  L  DMWS+G I   L +G   F G+ + + +T I  V
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 59  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 114
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 175 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +F + Y++   LGKG+F  V +        + A  II  KK      Q +++   +I + 
Sbjct: 8   RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-KLEREARICRL 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
             H   IV+L    + + H  L+F+L++   L+  I    ++  S        QQ+  A+
Sbjct: 67  LKHPN-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAV 123
Query: 226 AFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRS 281
             L   ++ ++H +LKPEN+LL S  K +A+K+ DFG +  V    Q  + +  +  Y S
Sbjct: 124 --LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           PEVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 13  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   +L +   + YY 
Sbjct: 129 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSLTEPCYTPYYV 184
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 65  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 120
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 181 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 236
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
           D YE+   LG G F  V K        + A K IK ++   ++  +  + +E+ +N   +
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I    I+ L   F  K  + L+ EL+S   L++ +       ++ +   +F +Q+   + 
Sbjct: 65  IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
           +L S  ++  H DLKPENI+L         IK+IDFG +     G        +  + +P
Sbjct: 123 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E++   P  L  DMWS+G I   L +G   F G+ + + +T I  V
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  +  VAIKII  +  +  +   Q E+ +L + +     S Y+ K
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 84
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             G +     L ++ E L   +  +L+         +       +++   L +L S +  
Sbjct: 85  YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 140
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
            IH D+K  N+LL   +   +K+ DFG +  +  T  +   ++ + ++ +PEV+    YD
Sbjct: 141 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 292 LAIDMWSLGCILVELHTGEP 311
              D+WSLG   +EL  GEP
Sbjct: 198 SKADIWSLGITAIELARGEP 217

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 186
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVK 175
           +LGKGSFG+V+ +         A+KI+K K   +    +E  ++EK +        ++ +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406
Query: 176 LKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           L   F   + L  V E      L Y++  + R    H V       +A ++   L FL S
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQS 460
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLG 287
               II+ DLK +N++L S     IKI DFG    +   G T   +  +  Y +PE++  
Sbjct: 461 K--GIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            PY  ++D W+ G +L E+  G+  F G++E +    I+E
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRYIVK 175
           +LG G+F +V            A+K IK    F + + + E+ +L+KI   +I     V 
Sbjct: 16  VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI-----VT 70
Query: 176 LKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA----QQLCCALAFLSS 230
           L+  +    H  LV +L+S   L++ I     +      T+K A    QQ+  A+ +L  
Sbjct: 71  LEDIYESTTHYYLVMQLVSGGELFDRILERGVY------TEKDASLVIQQVLSAVKYLH- 123
Query: 231 PELSIIHCDLKPENILLCSPKR-SAIKIIDFG-SSCHVGQTLYQYIQSRYYRSPEVLLGI 288
            E  I+H DLKPEN+L  +P+  S I I DFG S       +     +  Y +PEVL   
Sbjct: 124 -ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK 182
Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           PY  A+D WS+G I   L  G P F  + E     KI E
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 13  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 129 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 184
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +E+++ LG+G+   V +      +   A+K++K K       + E+ +L +++  +I 
Sbjct: 53  DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVRTEIGVLLRLSHPNI- 110
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
               +KLK  F     + LV EL++   L++ I    ++  S        +Q+  A+A+L
Sbjct: 111 ----IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY--SERDAADAVKQILEAVAYL 164
Query: 229 SSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVG-QTLYQYI-QSRYYRSPEVL 285
              E  I+H DLKPEN+L  +P   A +KI DFG S  V  Q L + +  +  Y +PE+L
Sbjct: 165 H--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL 222
Query: 286 LGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKII 326
            G  Y   +DMWS+G I   L  G EP +  + +     +I+
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
           K GE   D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L
Sbjct: 9   KVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL 68
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N     S YIV   G F     + +  E +   +L  +++      +   +  K + 
Sbjct: 69  HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSI 121
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
            +   LA+L   +  I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R 
Sbjct: 122 AVLRGLAYLRE-KHQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
           Y +PE L G  Y +  D+WS+G  LVEL  G
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 29  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 84
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 85  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 145 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 200
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 20  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 75
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 76  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 136 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 191
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 19  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 75  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 135 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 190
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 21  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 76
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 77  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 137 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-IN-KAD 167
           D YE+   LG G F  V K        + A K IK ++   ++  +  + +E+ +N   +
Sbjct: 12  DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I    I+ L   F  K  + L+ EL+S   L++ +       ++ +   +F +Q+   + 
Sbjct: 72  IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVH 129
Query: 227 FLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSP 282
           +L S  ++  H DLKPENI+L         IK+IDFG +     G        +  + +P
Sbjct: 130 YLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           E++   P  L  DMWS+G I   L +G   F G+ + + +T I  V
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  +  VAIKII  +  +  +   Q E+ +L + +     S Y+ K
Sbjct: 35  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 89
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             G +     L ++ E L   +  +L+         +       +++   L +L S +  
Sbjct: 90  YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 145
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
            IH D+K  N+LL   +   +K+ DFG +  +  T  +   ++ + ++ +PEV+    YD
Sbjct: 146 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 292 LAIDMWSLGCILVELHTGEP 311
              D+WSLG   +EL  GEP
Sbjct: 203 SKADIWSLGITAIELARGEP 222

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIV 174
           +LGKGSFG+V  A   +     AIK +K K   L    +E  ++EK  ++ A  H  ++ 
Sbjct: 24  MLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLAWEHP-FLT 81
Query: 175 KLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
            +   F  K +L  V E L+    +Y++    + H   L+    +A ++   L FL S  
Sbjct: 82  HMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSK- 137
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQT-LYQYIQSRYYRSPEVLLGIP 289
             I++ DLK +NILL   K   IKI DFG      +G      +  +  Y +PE+LLG  
Sbjct: 138 -GIVYRDLKLDNILL--DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           Y+ ++D WS G +L E+  G+  F G++E
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 14  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 69
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 70  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 130 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 185
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + DMWSLG I+  L  G P F
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
           ++   +E   +LG+G+FGQVVKA +  +    AIK I++ +  L+    EV LL  +N  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
                  A +  R  VK       K+ L +  E   +  LY+LI + N +       + F
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
            +Q+  AL+++ S    IIH DLKP NI +   +   +KI DFG + +V ++        
Sbjct: 123 -RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
                    L   I +  Y + EVL G   Y+  IDM+SLG I  E+    P  +G   V
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
           + + K+  V +  PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  +  VAIKII  +  +  +   Q E+ +L + +     S Y+ K
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 69
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             G +     L ++ E L   +  +L+         +       +++   L +L S +  
Sbjct: 70  YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
            IH D+K  N+LL   +   +K+ DFG +  +  T  +   ++ + ++ +PEV+    YD
Sbjct: 126 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 292 LAIDMWSLGCILVELHTGEP 311
              D+WSLG   +EL  GEP
Sbjct: 183 SKADIWSLGITAIELARGEP 202

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
           +GKGSFG+V K  D+  +  VAIKII  +  +  +   Q E+ +L + +     S Y+ K
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-----SPYVTK 69
Query: 176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             G +     L ++ E L   +  +L+         +       +++   L +L S +  
Sbjct: 70  YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI---ATILREILKGLDYLHSEKK- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYD 291
            IH D+K  N+LL   +   +K+ DFG +  +  T  +   ++ + ++ +PEV+    YD
Sbjct: 126 -IHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 292 LAIDMWSLGCILVELHTGEP 311
              D+WSLG   +EL  GEP
Sbjct: 183 SKADIWSLGITAIELARGEP 202

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD-IHS 170
           Y I   LG+GSFG+V  A  ++ + +VA+K I  +   L ++ + +++  +I+    +  
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ--LLKKSDMHMRVEREISYLKLLRH 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLI----RNTNFHGVSLNLTKKFAQQLCCALA 226
            +I+KL    T    + +V E     L++ I    R T   G      ++F QQ+ CA+ 
Sbjct: 69  PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG------RRFFQQIICAIE 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEV 284
           +    +  I+H DLKPEN+LL       +KI DFG S  +  G  L     S  Y +PEV
Sbjct: 123 YCHRHK--IVHRDLKPENLLL--DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 285 LLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  Y    +D+WS G +L  +  G   F  +   +   K+   + + P +L  GA
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGA 235

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
           ++   +E   +LG+G+FGQVVKA +  +    AIK I++ +  L+    EV LL  +N  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
                  A +  R  VK       K+ L +  E   +  LY+LI + N +       + F
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
            +Q+  AL+++ S    IIH DLKP NI +   +   +KI DFG + +V ++        
Sbjct: 123 -RQILEALSYIHSQ--GIIHRDLKPMNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
                    L   I +  Y + EVL G   Y+  IDM+SLG I  E+    P  +G   V
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
           + + K+  V +  PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 17  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 76  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 130
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 131 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 216

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +F D Y++   LGKG+F  V +        + A KII  KK      Q +++   +I + 
Sbjct: 28  RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRL 86
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
             H   IV+L    + +    LVF+L++   L+  I    ++          A    C  
Sbjct: 87  LKHPN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIH 137
Query: 226 AFLSSP----ELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVG---QTLYQYIQSR 277
             L S     +  I+H DLKPEN+LL S  K +A+K+ DFG +  V    Q  + +  + 
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            Y SPEVL   PY   +D+W+ G IL  L  G P F  +++
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ 238

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 15  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 74  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 128
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 129 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 214

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     +    ++  L
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 177 KGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           K  F   + LC V E  +     ++L R   F   +    + +  ++  AL +L S +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHSRD-- 125
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           +++ D+K EN++L   K   IKI DFG        G T+  +  +  Y +PEVL    Y 
Sbjct: 126 VVYRDIKLENLML--DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 292 LAIDMWSLGCILVELHTGE-PLFSGKNE 318
            A+D W LG ++ E+  G  P ++  +E
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
           K GE   D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L
Sbjct: 61  KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 120
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N     S YIV   G F     + +  E +   +L  +++      +   +  K + 
Sbjct: 121 HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 173
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
            +   L +L   +  I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R 
Sbjct: 174 AVIKGLTYLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
           Y SPE L G  Y +  D+WS+G  LVE+  G
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 39/269 (14%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK 162
           HG  F + YE   +LG+G    VV+   H+  C + A+KII         A+ EVQ L +
Sbjct: 13  HG--FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELRE 68
Query: 163 --INKADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
             + + DI  +      I++LK  +       LVF+L+    L++ +  T    +S   T
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKET 126
Query: 215 KKFAQQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQT 269
           +K  + L    CAL      +L+I+H DLKPENILL       IK+ DFG SC +  G+ 
Sbjct: 127 RKIMRALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEK 179
Query: 270 LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           L +   +  Y +PE++          Y   +DMWS G I+  L  G P F  + ++  + 
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSD 352
            I+       G    G+ +   Y D + D
Sbjct: 240 MIMS------GNYQFGSPEWDDYSDTVKD 262

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D Y++   LGKG+F  V +        + A KII  KK      Q +++   +I +   H
Sbjct: 4   DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+L    + +    LVF+L++   L+  I    ++          A    C    L
Sbjct: 63  PN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIQQIL 113
Query: 229 SSPEL----SIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYR 280
            S        I+H DLKPEN+LL S  K +A+K+ DFG +  V    Q  + +  +  Y 
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           SPEVL   PY   +DMW+ G IL  L  G P F  +++
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ 211

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ--IEVQLLEKINKADIH 169
           +E+   LG G FG V++    +   QVAIK  + +    N+ +  +E+Q+++K+N  ++ 
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN-----TNFHGVSLNLTKKFAQQLCCA 224
           S   V         N L L+   + Y     +R       N  G+     +     +  A
Sbjct: 77  SAREVPDGLQKLAPNDLPLLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 225 LAFLSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
           L +L   E  IIH DLKPENI+L   P+R   KIID G +  +  G+   +++ +  Y +
Sbjct: 135 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIE 327
           PE+L    Y + +D WS G +  E  TG  P       V    K+ E
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ--IEVQLLEKINKADIH 169
           +E+   LG G FG V++    +   QVAIK  + +    N+ +  +E+Q+++K+N  ++ 
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN-----TNFHGVSLNLTKKFAQQLCCA 224
           S   V         N L L+   + Y     +R       N  G+     +     +  A
Sbjct: 76  SAREVPDGLQKLAPNDLPLLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 225 LAFLSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
           L +L   E  IIH DLKPENI+L   P+R   KIID G +  +  G+   +++ +  Y +
Sbjct: 134 LRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIE 327
           PE+L    Y + +D WS G +  E  TG  P       V    K+ E
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEK 162
           GE   D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L +
Sbjct: 4   GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 63
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
            N     S YIV   G F     + +  E +   +L  +++      +   +  K +  +
Sbjct: 64  CN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV 116
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH-VGQTLYQYIQSRYYR 280
              L +L      I+H D+KP NIL+ S  R  IK+ DFG S   + +   +++ +R Y 
Sbjct: 117 IKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDEMANEFVGTRSYM 173
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG 309
           SPE L G  Y +  D+WS+G  LVE+  G
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 70  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 123 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 70  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 123 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 37/265 (13%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK--IN 164
           F + YE   +LG+G    VV+   H+  C + A+KII         A+ EVQ L +  + 
Sbjct: 2   FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLK 59
Query: 165 KADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
           + DI  +      I++LK  +       LVF+L+    L++ +  T    +S   T+K  
Sbjct: 60  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIM 117
Query: 219 QQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQY 273
           + L    CAL      +L+I+H DLKPENILL       IK+ DFG SC +  G+ L + 
Sbjct: 118 RALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 274 IQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
             +  Y +PE++          Y   +DMWS G I+  L  G P F  + ++  +  I+ 
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 328 VLGMPPGYLLHGASKTSKYFDRLSD 352
                 G    G+ +   Y D + D
Sbjct: 231 ------GNYQFGSPEWDDYSDTVKD 249

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D Y++   LGKG+F  V +        + A KII  KK      Q +++   +I +   H
Sbjct: 4   DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+L    + +    LVF+L++   L+  I    ++  S        QQ+   L  +
Sbjct: 63  PN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQI---LESV 116
Query: 229 SSPEL-SIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPE 283
           +   L  I+H DLKPEN+LL S  K +A+K+ DFG +  V    Q  + +  +  Y SPE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           VL   PY   +DMW+ G IL  L  G P F  +++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ 211

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLL 160
           K GE   D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L
Sbjct: 26  KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N     S YIV   G F     + +  E +   +L  +++      +   +  K + 
Sbjct: 86  HECN-----SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 138
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY 278
            +   L +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R 
Sbjct: 139 AVIKGLTYLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRS 195
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
           Y SPE L G  Y +  D+WS+G  LVE+  G
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
           Y ++  +G+GS+G+V  A     + +  A KI K     +++ + E+++++ ++  +I  
Sbjct: 11  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-- 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              ++L   F     + LV EL +   L+  + +      S     +  + +  A+A+  
Sbjct: 69  ---IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDVLSAVAYCH 123
Query: 230 SPELSIIHCDLKPENIL-LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
             +L++ H DLKPEN L L     S +K+IDFG +     G+ +   + + YY SP+VL 
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           G+ Y    D WS G ++  L  G P FS   + + M KI E
Sbjct: 182 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC-QVAIKIIKNKKPFLNQAQIEVQLLEK 162
           HG  F + YE   +LG+G    VV+   H+  C + A+KII         A+ EVQ L +
Sbjct: 13  HG--FYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELRE 68
Query: 163 --INKADIHSRY-----IVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT 214
             + + DI  +      I++LK  +       LVF+L+    L++ +  T    +S   T
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKET 126
Query: 215 KKFAQQL---CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQT 269
           +K  + L    CAL      +L+I+H DLKPENILL       IK+ DFG SC +  G+ 
Sbjct: 127 RKIMRALLEVICALH-----KLNIVHRDLKPENILL--DDDMNIKLTDFGFSCQLDPGEK 179
Query: 270 LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
           L     +  Y +PE++          Y   +DMWS G I+  L  G P F  + ++  + 
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSD 352
            I+       G    G+ +   Y D + D
Sbjct: 240 MIMS------GNYQFGSPEWDDYSDTVKD 262

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
           Y ++  +G+GS+G+V  A     + +  A KI K     +++ + E+++++ ++  +I  
Sbjct: 28  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-- 85
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              ++L   F     + LV EL +   L+  + +      S     +  + +  A+A+  
Sbjct: 86  ---IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD--AARIMKDVLSAVAYCH 140
Query: 230 SPELSIIHCDLKPENIL-LCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLL 286
             +L++ H DLKPEN L L     S +K+IDFG +     G+ +   + + YY SP+VL 
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           G+ Y    D WS G ++  L  G P FS   + + M KI E
Sbjct: 199 GL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F D YE+  ++GKG F  V +  + E   Q A+KI+   K F +   +  + L++  +A 
Sbjct: 24  FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 80
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
           I       +IV+L   ++    L +VFE +      + +++  +   V S  +   + +Q
Sbjct: 81  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
           +  AL +    + +IIH D+KP  +LL S + SA +K+  FG +  +G++       + +
Sbjct: 141 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 198
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            ++ +PEV+   PY   +D+W  G IL  L +G   F G  E
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 16/222 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F D YE+  ++GKG F  V +  + E   Q A+KI+   K F +   +  + L++  +A 
Sbjct: 22  FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK-FTSSPGLSTEDLKR--EAS 78
Query: 168 I----HSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGV-SLNLTKKFAQQ 220
           I       +IV+L   ++    L +VFE +      + +++  +   V S  +   + +Q
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQT---LYQYIQS 276
           +  AL +    + +IIH D+KP  +LL S + SA +K+  FG +  +G++       + +
Sbjct: 139 ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT 196
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            ++ +PEV+   PY   +D+W  G IL  L +G   F G  E
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK--------------NKKPFLNQAQIEVQLLEKI 163
           LG G++G+V+   +     + AIK+IK              N + F  +   E+ LL+ +
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +  +I     +KL   F  K +  LV E      L+  I   N H           +Q+ 
Sbjct: 104 DHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQI--INRHKFDECDAANIMKQIL 156
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRS--AIKIIDFGSSCHVGQ--TLYQYIQSRY 278
             + +L     +I+H D+KPENILL   K S   IKI+DFG S    +   L   + + Y
Sbjct: 157 SGICYLHKH--NIVHRDIKPENILL-ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           Y +PEVL    Y+   D+WS G I+  L  G P F G+N+ D + K+
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 63/280 (22%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQI--EVQLLEKINKA 166
           D Y I  L+G+GS+G V  A+D   +  VAIK +    +  ++  +I  E+ +L ++   
Sbjct: 26  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            I   Y + +       + L +V E+   +L  L +   F  ++    K     L     
Sbjct: 86  YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLLLGEN 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG------------------- 267
           F+   E  IIH DLKP N LL   +  ++K+ DFG +  +                    
Sbjct: 144 FIH--ESGIIHRDLKPANCLLN--QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 268 ------QTLYQYIQSRYYRSPE-VLLGIPYDLAIDMWSLGCILVEL------HTGE---- 310
                 + L  ++ +R+YR+PE +LL   Y  +ID+WS GCI  EL      H  +    
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Query: 311 -PLFSG-----------------KNEVDQMTKIIEVLGMP 332
            PLF G                 K+  DQ+  I  ++G P
Sbjct: 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP 299

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
           +L   +  I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 119 YLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
           +  Y+I   LG+GSFG+V  A+      +VA+KII NKK  L ++ ++ ++  +I+    
Sbjct: 13  IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 70
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +   +I+KL      K+ + +V E     L++ I   +   +S    ++F QQ+  A+ +
Sbjct: 71  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 128
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
               +  I+H DLKPEN+LL   +   +KI DFG S  +  G  L     S  Y +PEV+
Sbjct: 129 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 286 LGIPY-DLAIDMWSLGCIL 303
            G  Y    +D+WS G IL
Sbjct: 185 SGKLYAGPEVDVWSCGVIL 203

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLLEK 162
           D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV +L++
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I   ++     + L   +  K  + L+ EL++   L++ +       ++     +F +Q+
Sbjct: 71  IQHPNV-----ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
              + +L S  L I H DLKPENI+L     PK   IKIIDFG +  +  G        +
Sbjct: 124 LNGVYYLHS--LQIAHFDLKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
           +  Y+I   LG+GSFG+V  A+      +VA+KII NKK  L ++ ++ ++  +I+    
Sbjct: 12  IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +   +I+KL      K+ + +V E     L++ I   +   +S    ++F QQ+  A+ +
Sbjct: 70  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 127
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
               +  I+H DLKPEN+LL   +   +KI DFG S  +  G  L     S  Y +PEV+
Sbjct: 128 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 286 LGIPY-DLAIDMWSLGCIL 303
            G  Y    +D+WS G IL
Sbjct: 184 SGKLYAGPEVDVWSCGVIL 202

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
           +  Y+I   LG+GSFG+V  A+      +VA+KII NKK  L ++ ++ ++  +I+    
Sbjct: 7   IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +   +I+KL      K+ + +V E     L++ I   +   +S    ++F QQ+  A+ +
Sbjct: 65  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 122
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
               +  I+H DLKPEN+LL   +   +KI DFG S  +  G  L     S  Y +PEV+
Sbjct: 123 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 286 LGIPY-DLAIDMWSLGCIL 303
            G  Y    +D+WS G IL
Sbjct: 179 SGKLYAGPEVDVWSCGVIL 197

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD- 167
           +  Y+I   LG+GSFG+V  A+      +VA+KII NKK  L ++ ++ ++  +I+    
Sbjct: 3   IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-NKK-VLAKSDMQGRIEREISYLRL 60
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +   +I+KL      K+ + +V E     L++ I   +   +S    ++F QQ+  A+ +
Sbjct: 61  LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEY 118
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVL 285
               +  I+H DLKPEN+LL   +   +KI DFG S  +  G  L     S  Y +PEV+
Sbjct: 119 CHRHK--IVHRDLKPENLLL--DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 286 LGIPY-DLAIDMWSLGCIL 303
            G  Y    +D+WS G IL
Sbjct: 175 SGKLYAGPEVDVWSCGVIL 193

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII--KNKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I  + K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S YIV   G F     + +  E +   +L  +++      +   +  K +  +   L 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYRSPEVL 285
           +L      I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +R Y SPE L
Sbjct: 119 YLREKH-KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 286 LGIPYDLAIDMWSLGCILVELHTG 309
            G  Y +  D+WS+G  LVE+  G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D Y++   +GKG+F  V +        + A KII  KK      Q +++   +I +   H
Sbjct: 4   DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 62
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           S  IV+L    + +    LVF+L++   L+  I    ++  S        QQ+    A L
Sbjct: 63  SN-IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQI--LEAVL 117
Query: 229 SSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEV 284
              ++ ++H DLKPEN+LL S  K +A+K+ DFG +  V    Q  + +  +  Y SPEV
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           L    Y   +D+W+ G IL  L  G P F  +++
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ 211

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 29/311 (9%)
Query: 52  LIKTYKHINEVYYTKKKRKAQLSHNE----TRSNKKEKKYVHNDGHDDENYDYIIKHGE- 106
           L+    H+  +Y+   + + +    E     RS ++E + V ++         ++  G+ 
Sbjct: 14  LVPRGSHMENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHE-QFRAALQLVVDPGDP 72
Query: 107 -KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
             +LD +     +G+GS G V  A        VA+K +  +K    Q + E+   E +  
Sbjct: 73  RSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIM 125
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            D     +V++   +   + L +V E L    L +++ +T      +N  +  A  L   
Sbjct: 126 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVL 180
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRS 281
            A        +IH D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +
Sbjct: 181 QALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGA 340
           PE++  +PY   +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKV 296
Query: 341 SKTSKYF-DRL 350
           S + K F DRL
Sbjct: 297 SPSLKGFLDRL 307

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 26/243 (10%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLL 160
           G   L  + I+  +G+G F +V +A    +   VA+K ++       +A+     E+ LL
Sbjct: 27  GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHG--VSLNLTKKF 217
           +++N  ++     +K    F   N L +V EL  + +L  +I++       +      K+
Sbjct: 87  KQLNHPNV-----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLY 271
             QLC AL  + S    ++H D+KP N+ + +     +K+ D G      S      +L 
Sbjct: 142 FVQLCSALEHMHS--RRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAHSL- 196
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLG 330
             + + YY SPE +    Y+   D+WSLGC+L E+   + P +  K  +  + K IE   
Sbjct: 197 --VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 331 MPP 333
            PP
Sbjct: 255 YPP 257

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 83  KEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI 142
           +EK  +   G  D +Y + I+  E  L      T +G GSFG V K   H +   VA+KI
Sbjct: 14  QEKNKIRPRGQRDSSYYWEIEASEVMLS-----TRIGSGSFGTVYKGKWHGD---VAVKI 65
Query: 143 IKNKKPFLNQAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
           +K   P   Q Q    EV +L K    +I     +   G+ T K++L +V +     +LY
Sbjct: 66  LKVVDPTPEQFQAFRNEVAVLRKTRHVNI-----LLFMGYMT-KDNLAIVTQWCEGSSLY 119
Query: 199 NL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK 256
               ++ T F    L      A+Q    + +L +   +IIH D+K  NI L   +   +K
Sbjct: 120 KHLHVQETKFQMFQL---IDIARQTAQGMDYLHAK--NIIHRDMKSNNIFLH--EGLTVK 172
Query: 257 IIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHT 308
           I DFG     S     Q + Q   S  + +PEV+      P+    D++S G +L EL T
Sbjct: 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
Query: 309 GEPLFSGKNEVDQMTKII 326
           GE  +S  N  DQ+  ++
Sbjct: 233 GELPYSHINNRDQIIFMV 250

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KAD 167
           +D +EI   LGKG FG V  A + +    VA+K++   +  + +  +E QL  +I  +A 
Sbjct: 22  IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ--IEKEGVEHQLRREIEIQAH 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LY-NLIRNTNFHGVSLNLTKKFAQQLCCAL 225
           +H   I++L  +F  +  + L+ E      LY  L ++  F       T    ++L  AL
Sbjct: 80  LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF---DEQRTATIMEELADAL 136
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-YRSPEV 284
            +    +  +IH D+KPEN+LL    +  +KI DFG S H      + +     Y  PE+
Sbjct: 137 MYCHGKK--VIHRDIKPENLLLGL--KGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEM 192
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           + G  ++  +D+W +G +  EL  G P F   +  +   +I++V    P  +  GA
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA 248

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K +++      +A+ EV+L  + ++ 
Sbjct: 59  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQD----CPKARREVELHWRASQC 114
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFG----SSCHVGQTLYQYIQSRYYR 280
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG    ++ H   T   Y  + YY 
Sbjct: 175 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYV 230
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           +PEVL    YD + D WSLG I   L  G P F
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 29/243 (11%)
Query: 99  DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ 158
           D + K  E+  D  E    LG+GS+G V KA   E    VAIK          Q  +E  
Sbjct: 21  DSLTKQPEEVFDVLE---KLGEGSYGSVYKAIHKETGQIVAIK----------QVPVESD 67
Query: 159 LLEKINKADI----HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNL 213
           L E I +  I     S ++VK  G +     L +V E   + ++ ++IR  N   ++ + 
Sbjct: 68  LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDE 126
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ- 272
                Q     L +L    +  IH D+K  NILL +   +  K+ DFG +  +   + + 
Sbjct: 127 IATILQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGHA--KLADFGVAGQLTDXMAKR 182
Query: 273 --YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
              I + ++ +PEV+  I Y+   D+WSLG   +E+  G+P ++   ++  M  I  +  
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFMIPT 239
Query: 331 MPP 333
            PP
Sbjct: 240 NPP 242

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +  + +E+   
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   ++ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +++  H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 1   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E +    +L++ I  T    +   L
Sbjct: 61  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI--TERGALQEEL 115
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 172
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 35/257 (13%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-- 164
           ++   +E   +LG+G+FGQVVKA +  +    AIK I++ +  L+    EV LL  +N  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 165 ------KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKF 217
                  A +  R  VK       K+ L +  E   +  LY+LI + N +       + F
Sbjct: 63  YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-------- 269
            +Q+  AL+++ S    IIH +LKP NI +   +   +KI DFG + +V ++        
Sbjct: 123 -RQILEALSYIHSQ--GIIHRNLKPXNIFIDESRN--VKIGDFGLAKNVHRSLDILKLDS 177
Query: 270 ---------LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
                    L   I +  Y + EVL G   Y+  ID +SLG I  E     P  +G   V
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERV 235
Query: 320 DQMTKIIEV-LGMPPGY 335
           + + K+  V +  PP +
Sbjct: 236 NILKKLRSVSIEFPPDF 252

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRY+    +G G+FG      D   K  VA+K I+         Q E+     IN   + 
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-----INHRSLR 74
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL ++ E  S   LY  I N      S +  + F QQL   +++ 
Sbjct: 75  HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYC 132
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
            S  + I H DLK EN LL       +KI DFG   S  +       + +  Y +PEVLL
Sbjct: 133 HS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
              YD  I D+WS G  L  +  G   F    E     K I+
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +  + +E+   
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   ++ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +++  H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
            +LGKG++G V    D   + ++AIK I  +    +Q   E   L K     +  + IV+
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK----HLKHKNIVQ 83
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSPEL 233
             G F+    + +  E +     + +  + +  +  N      + +Q+   L +L   + 
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 142
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP- 289
            I+H D+K +N+L+ +     +KI DFG+S     +      +  +  Y +PE++   P 
Sbjct: 143 -IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 290 -YDLAIDMWSLGCILVELHTGEPLF 313
            Y  A D+WSLGC ++E+ TG+P F
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +  + +E+   
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   ++ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +++  H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYE+   +G G+FG      D +    VA+K I+  +      + E+     IN   + 
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL +V E  S   L+  I N      S +  + F QQL   +++ 
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
            +  + + H DLK EN LL       +KI DFG   S  +       + +  Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              YD  + D+WS G  L  +  G   F    E     K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A        VA+K +  +K    Q + E+   E +   D     +V++ 
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T      +N  +  A  L    A        +I
Sbjct: 88  NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +PE++  +PY   
Sbjct: 143 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
           +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  S + K F DRL
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 257

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A        VA+K +  +K    Q + E+   E +   D     +V++ 
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T      +N  +  A  L    A        +I
Sbjct: 93  NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +PE++  +PY   
Sbjct: 148 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
           +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  S + K F DRL
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 262

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A        VA+K +  +K    Q + E+   E +   D     +V++ 
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T      +N  +  A  L    A        +I
Sbjct: 95  NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +PE++  +PY   
Sbjct: 150 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
           +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  S + K F DRL
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 264

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +  + +E+   
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   ++ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +++  H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
           ++ + +  ++G+G FG+V      +     A+K +  K+  + Q +     E  +L  ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
             D    +IV +   F   + L  + +L+  N  +L  + + HGV      +F A ++  
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
            L  + +    +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
           EVL  G+ YD + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A        VA+K +  +K    Q + E+   E +   D     +V++ 
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T      +N  +  A  L    A        +I
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +PE++  +PY   
Sbjct: 270 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
           +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  S + K F DRL
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 384

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--- 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +  + +E+   
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   ++ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +++  H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A        VA+K +  +K    Q + E+   E +   D     +V++ 
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L    L +++ +T      +N  +  A  L    A        +I
Sbjct: 84  NSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    V + + +    + + Y+ +PE++  +PY   
Sbjct: 139 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL-LHGASKTSKYF-DRL 350
           +D+WSLG +++E+  GEP +  +  +  M  I +   +PP    LH  S + K F DRL
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--NLPPRLKNLHKVSPSLKGFLDRL 253

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
           ++ + +  ++G+G FG+V      +     A+K +  K+  + Q +     E  +L  ++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
             D    +IV +   F   + L  + +L+  N  +L  + + HGV      +F A ++  
Sbjct: 247 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 302
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
            L  + +    +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +P
Sbjct: 303 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 358
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
           EVL  G+ YD + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK 175
            +LGKG++G V    D   + ++AIK I  +    +Q   E   L K     +  + IV+
Sbjct: 14  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK----HLKHKNIVQ 69
Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSPEL 233
             G F+    + +  E +     + +  + +  +  N      + +Q+   L +L   + 
Sbjct: 70  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 128
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP- 289
            I+H D+K +N+L+ +     +KI DFG+S     +      +  +  Y +PE++   P 
Sbjct: 129 -IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 290 -YDLAIDMWSLGCILVELHTGEPLF 313
            Y  A D+WSLGC ++E+ TG+P F
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPF 211

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYE+   +G G+FG      D +    VA+K I+  +      + E+     IN   + 
Sbjct: 19  DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL +V E  S   L+  I N      S +  + F QQL   +++ 
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYA 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEVLL 286
            +  + + H DLK EN LL       +KI DFG S    +       + +  Y +PEVLL
Sbjct: 132 HA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              YD  + D+WS G  L  +  G   F    E     K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
           ++ + +  ++G+G FG+V      +     A+K +  K+  + Q +     E  +L  ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
             D    +IV +   F   + L  + +L+  N  +L  + + HGV      +F A ++  
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
            L  + +    +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
           EVL  G+ YD + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKIN 164
           ++ + +  ++G+G FG+V      +     A+K +  K+  + Q +     E  +L  ++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-AQQLCC 223
             D    +IV +   F   + L  + +L+  N  +L  + + HGV      +F A ++  
Sbjct: 248 TGDCP--FIVCMSYAFHTPDKLSFILDLM--NGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
            L  + +    +++ DLKP NILL   +   ++I D G +C   +   +  + +  Y +P
Sbjct: 304 GLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 359
Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLF-----SGKNEVDQMTKIIEV 328
           EVL  G+ YD + D +SLGC+L +L  G   F       K+E+D+MT  + V
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLL 160
           G+   +RY+I   LG G    V  A D     +VAIK I    + K+  L + + EV   
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH-- 63
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQ 219
              N + +  + IV +       +   LV E +      L      HG +S++    F  
Sbjct: 64  ---NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP--TLSEYIESHGPLSVDTAINFTN 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQ---YIQ 275
           Q+   +    + ++ I+H D+KP+NIL+ S K   +KI DFG +  + +T L Q    + 
Sbjct: 119 QILDGIKH--AHDMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  Y SPE   G   D   D++S+G +L E+  GEP F+G+  V
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYE+   +G G+FG      D +    VA+K I+  +      + E+     IN   + 
Sbjct: 18  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 72
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL +V E  S   L+  I N      S +  + F QQL   +++ 
Sbjct: 73  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
            +  + + H DLK EN LL       +KI DFG   S  +       + +  Y +PEVLL
Sbjct: 131 HA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              YD  + D+WS G  L  +  G   F    E     K I
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
           +K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
           +EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   
Sbjct: 61  MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
           L + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y 
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
           +K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
           +EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   
Sbjct: 61  MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
           L + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y 
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEK 162
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +   E++    
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQL 221
           I +  +H   I+ L   +  +  + L+ EL+S   L++ +       +S      F +Q+
Sbjct: 68  ILRQVLHPN-IITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSA--IKIIDFGSSCHV--GQTLYQYIQSR 277
              + +L + +  I H DLKPENI+L         IK+IDFG +  +  G        + 
Sbjct: 125 LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G++G V K         +A+K I++      Q Q+ + L   +  +D    YIV+  
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP--YIVQFY 87
Query: 178 GHFTWKNHLCLVFELLSYNL---YNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
           G    +    +  EL+S +    Y  + +     +   +  K       AL  L    L 
Sbjct: 88  GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE-NLK 146
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPEVLLGIP--- 289
           IIH D+KP NILL   +   IK+ DFG S  +  ++ +   +  R Y +PE +       
Sbjct: 147 IIHRDIKPSNILL--DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 290 -YDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPP 333
            YD+  D+WSLG  L EL TG   +   N V DQ+T++++  G PP
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPP 248

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
           +K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
           +EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   
Sbjct: 61  MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 115
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
           L + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y 
Sbjct: 116 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 172
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           D  LG+GSF    K    +     A+KII  +     Q +I    L      + H   IV
Sbjct: 16  DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL-----CEGHPN-IV 69
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           KL   F  + H  LV ELL+   L+  I+       S        ++L  A++ +   ++
Sbjct: 70  KLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMH--DV 125
Query: 234 SIIHCDLKPENILLCSPKRS-AIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIP 289
            ++H DLKPEN+L      +  IKIIDFG +       Q L     + +Y +PE+L    
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 290 YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL 329
           YD + D+WSLG IL  + +G+  F   +     T  +E++
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQ 154
           +K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  
Sbjct: 23  MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLN 212
           +EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   
Sbjct: 83  MEVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEE 137
Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY- 271
           L + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y 
Sbjct: 138 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 194
Query: 272 QYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 1   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 61  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 115
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 172
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           Y++  ++G+G+FG+V +   H+   +V    + +K   + ++       E+   A  +S 
Sbjct: 77  YDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           ++V+L   F    +L +V E +   +L NL+ N   + V     K +  ++  AL  + S
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHS 192
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY----IQSRYYRSPEVLL 286
             + +IH D+KP+N+LL   K   +K+ DFG+   + +T   +    + +  Y SPEVL 
Sbjct: 193 --MGLIHRDVKPDNMLL--DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
                  Y    D WS+G  L E+  G+  F   + V   +KI++
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 17  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 77  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 16  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 76  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 187
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 16  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 76  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 130
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 187
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 17  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 77  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 29  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 89  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 36  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 96  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 150
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 151 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 207
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 17  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 77  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 131
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 188
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 29  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 89  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 30  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 90  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 30  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 90  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 29  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 89  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 44  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 49  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 109 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 163
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 164 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 220
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 30  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 90  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 29  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 89  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 143
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 200
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 30  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 90  EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 144
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 201
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
            D +EI   +GKGSFG+V     ++ K   A+K + NK+  + + ++     E+Q+++ +
Sbjct: 14  FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYM-NKQKCVERNEVRNVFKELQIMQGL 72
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
                   ++V L   F  +  + +V +LL      Y+L +N +F   ++ L   F  +L
Sbjct: 73  EHP-----FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL---FICEL 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ--TLYQYIQSRYY 279
             AL +L +    IIH D+KP+NILL   +   + I DF  +  + +   +     ++ Y
Sbjct: 125 VMALDYLQNQR--IIHRDMKPDNILL--DEHGHVHITDFNIAAMLPRETQITTMAGTKPY 180
Query: 280 RSPEVLL---GIPYDLAIDMWSLGCILVELHTG 309
            +PE+     G  Y  A+D WSLG    EL  G
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 44  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GS G V  A +     QVA+K++  +K    Q + E+   E +   D     +V++ 
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 178 GHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +     L ++ E L    L +++     +   +    +   Q   ALA+L +    +I
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQ---ALAYLHAQ--GVI 163
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K ++ILL    R  +K+ DFG    + + + +    + + Y+ +PEV+    Y   
Sbjct: 164 HRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 294 IDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           +D+WSLG +++E+  GEP +   + V  M ++
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA+KII   K  LN   +     EV++++ +N  
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKIID--KTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCAL 225
           +I     VKL      +  L LV E  S     +      HG +     +   +Q+  A+
Sbjct: 75  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPE 283
            +    +  I+H DLK EN+LL       IKI DFG S    VG  L  +  S  Y +PE
Sbjct: 128 QYCH--QKYIVHRDLKAENLLLDGDMN--IKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 284 VLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQ 158
           E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +EV 
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKK 216
           LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L + 
Sbjct: 63  LLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARS 117
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQ 275
           F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  +  
Sbjct: 118 FFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDG 174
Query: 276 SRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 69/274 (25%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIE-----VQLLEKIN 164
           +Y +   +G+GS+G V  A +++ +   AIKI+ KNK   +N   +E     V+L++K++
Sbjct: 27  KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-------SYNLY----------NLIR----- 202
             +I   Y V     +  + ++CLV EL          N++          ++++     
Sbjct: 87  HPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 203 ---------NTNFHGV--SLNLTKK------FAQQLCCALAFLSSPELSIIHCDLKPENI 245
                    N + HG   SL+  ++        +Q+  AL +L +    I H D+KPEN 
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--GICHRDIKPENF 199
Query: 246 LLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR-----------SPEVL--LGIPYDL 292
           L  + K   IK++DFG S    +  Y+     YY            +PEVL      Y  
Sbjct: 200 LFSTNKSFEIKLVDFGLS----KEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             D WS G +L  L  G   F G N+ D +++++
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL 289

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
           +Y++  LLG G FG V       +   VAIK ++  +       P   +  +EV LL+K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           +        +++L   F   +   L+ E      +L++ I  T    +   L + F  Q+
Sbjct: 65  SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
             A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  +  +R Y 
Sbjct: 120 LEAVRHCHN--XGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
           KF D Y++ + LLG+G++ +V  A   +   + A+KII+ K+   +++++  EV+ L + 
Sbjct: 9   KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
                 ++ I++L   F       LVFE L     L ++ +  +F+    +   +  + +
Sbjct: 68  QG----NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS---RVVRDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDF--GS------SCHVGQT--L 270
             AL FL +    I H DLKPENIL  SP++ S +KI DF  GS      SC    T  L
Sbjct: 121 AAALDFLHTK--GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 271 YQYIQSRYYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
                S  Y +PEV+         YD   D+WSLG +L  + +G P F G    D
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 32/241 (13%)
Query: 104 HGEKF-LDRYEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIK-----NKKPFLNQAQ 154
           H EK  ++ +E+  +LG G++G+V    K   H+     A+K++K      K       +
Sbjct: 47  HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNF--HGVS 210
            E Q+LE I +    S ++V L   F  +  L L+ + ++      +L +   F  H V 
Sbjct: 107 TERQVLEHIRQ----SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ 162
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHV 266
           +     +  ++  AL  L   +L II+ D+K ENILL S     + + DFG S       
Sbjct: 163 I-----YVGEIVLALEHLH--KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADE 213
Query: 267 GQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
            +  Y +  +  Y +P+++ G    +D A+D WSLG ++ EL TG   F+   E +   +
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 325 I 325
           I
Sbjct: 274 I 274

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           LD++E++         LG G FG+V +    +    VA+K +K      +  ++E  L E
Sbjct: 3   LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                +I    +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    A Q
Sbjct: 58  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
           +  A+ +L     + IH DL   N L+   +   +K+ DFG S    G T   +  +++ 
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             + +PE L    + +  D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
           +Y++  LLG G FG V       +   VAIK ++  +       P   +  +EV LL+K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           +        +++L   F   +   L+ E      +L++ I  T    +   L + F  Q+
Sbjct: 65  SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
             A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  +  +R Y 
Sbjct: 120 LEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKI 163
           +Y++  LLG G FG V       +   VAIK ++  +       P   +  +EV LL+K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           +        +++L   F   +   L+ E      +L++ I  T    +   L + F  Q+
Sbjct: 65  SSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQV 119
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYYR 280
             A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  +  +R Y 
Sbjct: 120 LEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYS 176
Query: 281 SPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYE+   +G G+FG      D +    VA+K I+  +      + E+     IN   + 
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL +V E  S   L+  I N      S +  + F QQL   +++ 
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
            +  + + H DLK EN LL       +KI  FG   S  +       + +  Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              YD  + D+WS G  L  +  G   F    E     K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           DRYE+   +G G+FG      D +    VA+K I+  +      + E+     IN   + 
Sbjct: 19  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLR 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              IV+ K       HL +V E  S   L+  I N      S +  + F QQL   +++ 
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYC 131
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSPEVLL 286
            +  + + H DLK EN LL       +KI  FG   S  +       + +  Y +PEVLL
Sbjct: 132 HA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 287 GIPYDLAI-DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              YD  + D+WS G  L  +  G   F    E     K I
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           LD++E++         LG G +G+V +    +    VA+K +K      +  ++E  L E
Sbjct: 3   LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                +I    +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    A Q
Sbjct: 58  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
           +  A+ +L     + IH DL   N L+   +   +K+ DFG S    G T   +  +++ 
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             + +PE L    + +  D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKADIHSRYI 173
           +G GSFG V  A D      VAIK +       N+       EV+ L+K+   +      
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
             L+ H  W   L + + L S +    +       V +      A Q    LA+L S   
Sbjct: 122 CYLREHTAW---LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHS--H 173
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI---PY 290
           ++IH D+K  NILL  P    +K+ DFGS+  +      ++ + Y+ +PEV+L +    Y
Sbjct: 174 NMIHRDVKAGNILLSEP--GLVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           D  +D+WSLG   +EL   +P     N +  +  I +
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           LD++E++         LG G +G+V +    +    VA+K +K      +  ++E  L E
Sbjct: 3   LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 57
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                +I    +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    A Q
Sbjct: 58  AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
           +  A+ +L     + IH DL   N L+   +   +K+ DFG S    G T   +  +++ 
Sbjct: 118 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             + +PE L    + +  D+W+ G +L E+ T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VAIKII   K  LN   +     EV++++ +N  
Sbjct: 14  YRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKILNHP 71
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L L+ E  S     +      HG    + +K A+    Q+ 
Sbjct: 72  NI-----VKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHG---RMKEKEARSKFRQIV 121
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +       I+H DLK EN+LL +     IKI DFG S    VG  L  +  S  Y 
Sbjct: 122 SAVQYCHQKR--IVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----EVQLLEKINKADIHSRYI 173
           +G GSFG V  A D      VAIK +       N+       EV+ L+K+   +      
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
             L+ H  W   L + + L S +    +       V +      A Q    LA+L S   
Sbjct: 83  CYLREHTAW---LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ---GLAYLHSH-- 134
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI---PY 290
           ++IH D+K  NILL  P    +K+ DFGS+  +      ++ + Y+ +PEV+L +    Y
Sbjct: 135 NMIHRDVKAGNILLSEP--GLVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           D  +D+WSLG   +EL   +P     N +  +  I +
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           YE+  ++G+G+FG+V +   H+   +V    + +K   + ++       E+   A  +S 
Sbjct: 76  YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           ++V+L   F    +L +V E +   +L NL+ N   + V     + +  ++  AL  + S
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 191
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
             +  IH D+KP+N+LL   K   +K+ DFG+   + +         + +  Y SPEVL 
Sbjct: 192 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                  Y    D WS+G  L E+  G+  F   + V   +KI+
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI--XINKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           YE+  ++G+G+FG+V +   H+   +V    + +K   + ++       E+   A  +S 
Sbjct: 76  YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           ++V+L   F    +L +V E +   +L NL+ N   + V     + +  ++  AL  + S
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 191
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
             +  IH D+KP+N+LL   K   +K+ DFG+   + +         + +  Y SPEVL 
Sbjct: 192 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                  Y    D WS+G  L E+  G+  F   + V   +KI+
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           YE+  ++G+G+FG+V +   H+   +V    + +K   + ++       E+   A  +S 
Sbjct: 71  YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 172 YIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           ++V+L   F    +L +V E +   +L NL+ N   + V     + +  ++  AL  + S
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHS 186
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY----QYIQSRYYRSPEVLL 286
             +  IH D+KP+N+LL   K   +K+ DFG+   + +         + +  Y SPEVL 
Sbjct: 187 --MGFIHRDVKPDNMLL--DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 287 GIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                  Y    D WS+G  L E+  G+  F   + V   +KI+
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA+KII   +  LN + +     EV++++ +N  
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L LV E  S     +      HG    + +K A+    Q+ 
Sbjct: 74  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +    +  I+H DLK EN+LL +     IKI DFG S     G  L  +  S  Y 
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA++II   +  LN + +     EV++++ +N  
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L LV E  S     +      HG    + +K A+    Q+ 
Sbjct: 74  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +    +  I+H DLK EN+LL +     IKI DFG S     G  L ++  S  Y 
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 3   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 60
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 61  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 117
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 118 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA+KII   +  LN + +     EV++++ +N  
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L LV E  S     +      HG    + +K A+    Q+ 
Sbjct: 74  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +    +  I+H DLK EN+LL +     IKI DFG S     G  L  +  S  Y 
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 25/266 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+GSFG+ +     E+  Q  IK I   +  ++  + E    E    A++    IV+ +
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYVIKEINISR--MSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFH-GVSLNLTK--KFAQQLCCALAFLSSPELS 234
             F     L +V +       +L +  N   GV     +   +  Q+C AL  +   +  
Sbjct: 90  ESFEENGSLYIVMDYCEGG--DLFKRINAQKGVLFQEDQILDWFVQICLALKHVH--DRK 145
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYIQSRYYRSPEVLLGIPYD 291
           I+H D+K +NI L   K   +++ DFG +  +  T+      I + YY SPE+    PY+
Sbjct: 146 ILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA----SKTSKYF 347
              D+W+LGC+L EL T +  F   +  + + KII   G  P   LH +    S  S+ F
Sbjct: 204 NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLF 261
Query: 348 -----DRLSDNSYVLKKSTDTRKERL 368
                DR S NS + K     R E+ 
Sbjct: 262 KRNPRDRPSVNSILEKGFIAKRIEKF 287

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 110 DRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           D Y++   +LG G  G+V++ F      + A+K++ +      +     Q     +   I
Sbjct: 9   DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCI 68
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              Y     G    K  L ++ E +    L++ I+       +     +  + +  A+ F
Sbjct: 69  LDVYENMHHG----KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQY-IQSRYYRSPEVL 285
           L S   +I H D+KPEN+L  S ++ A+ K+ DFG +    Q   Q    + YY +PEVL
Sbjct: 125 LHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF 313
               YD + DMWSLG I+  L  G P F
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPF 210

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 62
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 63  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 110 DRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           D Y++   +LG G  G+V++ F      + A+K++ +      +     Q     +   I
Sbjct: 28  DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCI 87
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              Y     G    K  L ++ E +    L++ I+       +     +  + +  A+ F
Sbjct: 88  LDVYENMHHG----KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQY-IQSRYYRSPEVL 285
           L S   +I H D+KPEN+L  S ++ A+ K+ DFG +    Q   Q    + YY +PEVL
Sbjct: 144 LHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLF 313
               YD + DMWSLG I+  L  G P F
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPF 229

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 11  GSRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 62
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFH 207
           Q Q    EV +L K    +I     +   G+ T K  L +V +     +LY+     + H
Sbjct: 63  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYH-----HLH 111
Query: 208 GVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
                   K     A+Q    + +L +   SIIH DLK  NI L   + + +KI DFG  
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLA 167
Query: 262 ---SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSG 315
              S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S 
Sbjct: 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 316 KNEVDQMTKIIEVLG 330
            N  DQ   IIE++G
Sbjct: 228 INNRDQ---IIEMVG 239

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA+KII   +  LN + +     EV++++ +N  
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCAL 225
           +I     VKL      +  L LV E  S     +      HG +     +   +Q+  A+
Sbjct: 67  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGWMKEKEARAKFRQIVSAV 119
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPE 283
            +       I+H DLK EN+LL +     IKI DFG S     G  L  +  S  Y +PE
Sbjct: 120 QYCHQK--FIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 284 VLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           L  +++  ++G+GS+ +V+    K  D     +V  K + N    ++  Q E  + E+ +
Sbjct: 8   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +  ++V L   F  ++ L  V E ++    ++++ R      +     + ++ ++ 
Sbjct: 68  ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 120
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
            AL +L   E  II+ DLK +N+LL S     IK+ D+G        G T   +  +  Y
Sbjct: 121 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 176
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
            +PE+L G  Y  ++D W+LG ++ E+  G   F
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L     + I
Sbjct: 81  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA++II   +  LN + +     EV++++ +N  
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L LV E  S     +      HG    + +K A+    Q+ 
Sbjct: 74  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +    +  I+H DLK EN+LL +     IKI DFG S     G  L  +  S  Y 
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           L  +++  ++G+GS+ +V+    K  D     +V  K + N    ++  Q E  + E+ +
Sbjct: 51  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +  ++V L   F  ++ L  V E ++    ++++ R      +     + ++ ++ 
Sbjct: 111 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 163
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
            AL +L   E  II+ DLK +N+LL S     IK+ D+G        G T   +  +  Y
Sbjct: 164 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 219
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
            +PE+L G  Y  ++D W+LG ++ E+  G   F
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VA+KII   +  LN + +     EV++++ +N  
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIMKVLNHP 73
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L LV E  S     +      HG    + +K A+    Q+ 
Sbjct: 74  NI-----VKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHG---RMKEKEARAKFRQIV 123
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +    +  I+H DLK EN+LL +     IKI DFG S     G  L  +  +  Y 
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADMN--IKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKA 166
           Y +   +GKG+F +V  A       +VAIKII   K  LN   +     EV++++ +N  
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIID--KTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----QLC 222
           +I     VKL      +  L L+ E  S     +      HG    + +K A+    Q+ 
Sbjct: 75  NI-----VKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHG---RMKEKEARSKFRQIV 124
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYR 280
            A+ +       I+H DLK EN+LL +     IKI DFG S    VG  L  +  +  Y 
Sbjct: 125 SAVQYCHQKR--IVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 281 SPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           +PE+  G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           L  +++  ++G+GS+ +V+    K  D     +V  K + N    ++  Q E  + E+ +
Sbjct: 4   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +  ++V L   F  ++ L  V E ++    ++++ R      +     + ++ ++ 
Sbjct: 64  ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 116
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
            AL +L   E  II+ DLK +N+LL S     IK+ D+G        G T   +  +  Y
Sbjct: 117 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 172
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
            +PE+L G  Y  ++D W+LG ++ E+  G   F
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 109 LDRYEIDTLLGKGSFGQVV----KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           L  +++  ++G+GS+ +V+    K  D     +V  K + N    ++  Q E  + E+ +
Sbjct: 19  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +  ++V L   F  ++ L  V E ++    ++++ R      +     + ++ ++ 
Sbjct: 79  ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEIS 131
Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYY 279
            AL +L   E  II+ DLK +N+LL S     IK+ D+G        G T   +  +  Y
Sbjct: 132 LALNYLH--ERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNY 187
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF 313
            +PE+L G  Y  ++D W+LG ++ E+  G   F
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 48/305 (15%)
Query: 43  APLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYII 102
            P R  S   ++T   +    YT      + SH+  R +K    YV       + +  ++
Sbjct: 33  GPWRNESALSVETLLDVLVCLYT------ECSHSALRRDK----YVAEFLEWAKPFTQLV 82
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           K  +   + +EI  ++G+G+FG+V        +   A+KI+ NK   L +A+      E+
Sbjct: 83  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETACFREER 141
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +   ++I  L   F  +NHL LV +                G  L L  KF  +L 
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYY------------VGGDLLTLLSKFEDKLP 189
Query: 223 ----------CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
                       LA  S  +L  +H D+KP+N+LL       I++ DFGS   +      
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--G 245
Query: 273 YIQSRY------YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
            +QS        Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+ 
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 322 MTKII 326
             KI+
Sbjct: 306 YGKIM 310

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 48/305 (15%)
Query: 43  APLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYII 102
            P R  S   ++T   +    YT      + SH+  R +K    YV       + +  ++
Sbjct: 17  GPWRNESALSVETLLDVLVCLYT------ECSHSALRRDK----YVAEFLEWAKPFTQLV 66
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           K  +   + +EI  ++G+G+FG+V        +   A+KI+ NK   L +A+      E+
Sbjct: 67  KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL-NKWEMLKRAETACFREER 125
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
               +   ++I  L   F  +NHL LV +                G  L L  KF  +L 
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYY------------VGGDLLTLLSKFEDKLP 173
Query: 223 ----------CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
                       LA  S  +L  +H D+KP+N+LL       I++ DFGS   +      
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL--DVNGHIRLADFGSCLKMNDD--G 229
Query: 273 YIQSRY------YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
            +QS        Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+ 
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 322 MTKII 326
             KI+
Sbjct: 290 YGKIM 294

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 27/254 (10%)
Query: 90  NDGHDDENYDYIIKHGEKFLDRYEIDTL-----LGKGSFGQVVKAFDHEEKCQVAIKIIK 144
           + G   +   Y+   G+++  + EI+ L     +G G+ GQV K    +    +A+K ++
Sbjct: 2   SSGSSGKQTGYLTIGGQRY--QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 145 NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNT 204
                    +I + L   +   D    YIV+  G F     + +  EL+      L +  
Sbjct: 60  RSGNKEENKRILMDLDVVLKSHDCP--YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM 117
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
               +   +  K    +  AL +L      +IH D+KP NILL   +R  IK+ DFG S 
Sbjct: 118 Q-GPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILL--DERGQIKLCDFGIS- 172
Query: 265 HVGQTLYQYIQSR-----YYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGE-PLF 313
             G+ +    + R      Y +PE +         YD+  D+WSLG  LVEL TG+ P  
Sbjct: 173 --GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230
Query: 314 SGKNEVDQMTKIIE 327
           + K + + +TK+++
Sbjct: 231 NCKTDFEVLTKVLQ 244

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I+ ++   IN A 
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--IN-AM 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           ++   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 120 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 77  GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 134
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 135 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 193 KSDVWAFGVLLWEIAT 208

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F++ +++   LG+G+ G+V  A +   +  VA+KI+  K+       I+ ++   INK  
Sbjct: 4   FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC--INKML 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL   + 
Sbjct: 62  NHEN-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQYIQSRYYRS 281
           +L    + I H D+KPEN+LL   +R  +KI DFG +      +  + L +   +  Y +
Sbjct: 119 YLHG--IGITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 282 PEVLLGIPYDL-AIDMWSLGCILVELHTGE 310
           PE+L    +    +D+WS G +L  +  GE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 89/339 (26%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINK 165
           +F D YE+   +G GS+    +        + A+KII K+K+    + +I ++  +  N 
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                  I+ LK  +    ++ +V EL+    L + I    F          F+++   A
Sbjct: 78  -------IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF----------FSEREASA 120
Query: 225 LAFLSSPEL------SIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQY 273
           + F  +  +       ++H DLKP NIL    S    +I+I DFG +  +      L   
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMP 332
             +  + +PEVL    YD A D+WSLG +L  + TG  P  +G ++  +  +I+  +G  
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSG 238
Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXX 392
              L  G      Y++ +SD +                                      
Sbjct: 239 KFSLSGG------YWNSVSDTA-------------------------------------- 254
Query: 393 XXHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFL 431
                      KDL+ +ML  DP +R++   VLRH + +
Sbjct: 255 -----------KDLVSKMLHVDPHQRLTAALVLRHPWIV 282

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 81  GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 95  DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
           D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   Q Q
Sbjct: 2   DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 53
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVS 210
               EV +L K    +I     +   G+ T K  L +V +     +LY+     + H   
Sbjct: 54  AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYH-----HLHASE 102
Query: 211 LNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----- 261
                K     A+Q    + +L +   SIIH DLK  NI L   + + +KI DFG     
Sbjct: 103 TKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLATVK 158
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N 
Sbjct: 159 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 218
Query: 319 VDQMTKIIEVLG 330
            DQ   IIE++G
Sbjct: 219 RDQ---IIEMVG 227

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF 149
           GH   NYD      +  ++R +I     LG G +G+V +    +    VA+K +K     
Sbjct: 1   GHMSPNYD------KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---- 50
Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
            +  ++E  L E     +I    +V+L G  T +    ++ E ++Y NL + +R  N   
Sbjct: 51  -DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVG 267
           V+  +    A Q+  A+ +L     + IH DL   N L+   +   +K+ DFG S    G
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG 165
Query: 268 QTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            T   +  +++   + +PE L    + +  D+W+ G +L E+ T
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L+  +L +++  T      +    +   Q   AL FL S +  +I
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSNQ--VI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLA 293
           H D+K +NILL      ++K+ DFG    +        + + + Y+ +PEV+    Y   
Sbjct: 139 HRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKN 317
           +D+WSLG + +E+  GEP +  +N
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A+ +L   + + I
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFI 340
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H +L   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 341 HRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 399 KSDVWAFGVLLWEIAT 414

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 81  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 22  GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 73
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
           Q Q    EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T 
Sbjct: 74  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 127
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
           F  + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG    
Sbjct: 128 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATV 180
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
            S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N
Sbjct: 181 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
             DQ   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 241 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 284

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 23  GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 74
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
           Q Q    EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T 
Sbjct: 75  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
           F  + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG    
Sbjct: 129 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATV 181
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
            S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
             DQ   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 242 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 285

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 23  GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 74
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
           Q Q    EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T 
Sbjct: 75  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
           F  + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG    
Sbjct: 129 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATE 181
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
            S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
             DQ   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 242 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 285

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 78  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 135
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 136 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 194 KSDVWAFGVLLWEIAT 209

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 46/291 (15%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 15  GRRDSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 66
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTN 205
           Q Q    EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T 
Sbjct: 67  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK 120
Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---- 261
           F  + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG    
Sbjct: 121 FEMIKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATE 173
Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
            S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N
Sbjct: 174 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
             DQ   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 234 NRDQ---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 277

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKADIHS 170
           Y +   +GKG+F +V  A       +VA+KII   +  LN + ++    E +I K   H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ--LNSSSLQKLFREVRIXKVLNHP 73
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV--SLNLTKKFAQQLCCALAFL 228
             IVKL      +  L LV E  S     +      HG         KF +Q+  A+ + 
Sbjct: 74  N-IVKLFEVIETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAKF-RQIVSAVQYC 129
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH--VGQTLYQYIQSRYYRSPEVLL 286
              +  I+H DLK EN+LL +     IKI DFG S     G  L  +  +  Y +PE+  
Sbjct: 130 H--QKFIVHRDLKAENLLLDADXN--IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 287 GIPYD-LAIDMWSLGCILVELHTGEPLFSGKN 317
           G  YD   +D+WSLG IL  L +G   F G+N
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 81  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 89  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 146
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 147 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 205 KSDVWAFGVLLWEIAT 220

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN-QAQI--EVQLLEKINKADIHSRYIV 174
           LG+G F  V +        + A K +K ++   + +A+I  E+ +LE           ++
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP----RVI 92
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L   +   + + L+ E  +   +++L        VS N   +  +Q+   + +L   + 
Sbjct: 93  NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH--QN 150
Query: 234 SIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPY 290
           +I+H DLKP+NILL S      IKI+DFG S  +G    L + + +  Y +PE+L   P 
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI 210
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             A DMW++G I   L T    F G++  +    I +V
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           ++ ++G G FG+V +AF   +  +VA+K  ++         IE    E    A +    I
Sbjct: 11  LEEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           + L+G    + +LCLV E       N  R  +   +  ++   +A Q+   + +L    +
Sbjct: 69  IALRGVCLKEPNLCLVMEFARGGPLN--RVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 234 -SIIHCDLKPENILLCSPKRSA------IKIIDFGSSCHVGQTLYQYIQSRY-YRSPEVL 285
             IIH DLK  NIL+     +       +KI DFG +    +T        Y + +PEV+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
               +    D+WS G +L EL TGE  F G
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 81  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 139 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 80  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 137
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 138 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 196 KSDVWAFGVLLWEIAT 211

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
             +   + L +V E L+  +L +++  T      +    +   Q   AL FL S +  +I
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSNQ--VI 138
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDLA 293
           H D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y   
Sbjct: 139 HRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 IDMWSLGCILVELHTGEPLFSGKN 317
           +D+WSLG + +E+  GEP +  +N
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           + RY     LGKG F +  +  D + K   A K++  K   L   Q E    E      +
Sbjct: 25  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 83
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            + ++V   G F   + + +V E+    +L  L +      V+    + F +Q    + +
Sbjct: 84  DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 141
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L +    +IH DLK  N+ L       +KI DFG +  +   G+       +  Y +PEV
Sbjct: 142 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 197
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           L    +   +D+WSLGCIL  L  G+P F
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 226

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 134 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 109 LDRYEIDTL-------LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           +D++E++         LG G +G+V      +    VA+K +K      +  ++E  L E
Sbjct: 24  MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-----DTMEVEEFLKE 78
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                +I    +V+L G  T +    +V E + Y NL + +R  N   V+  +    A Q
Sbjct: 79  AAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQ 138
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY- 278
           +  A+ +L     + IH DL   N L+   +   +K+ DFG S    G T   +  +++ 
Sbjct: 139 ISSAMEYLEKK--NFIHRDLAARNCLVG--ENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             + +PE L    + +  D+W+ G +L E+ T
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           + RY     LGKG F +  +  D + K   A K++  K   L   Q E    E      +
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            + ++V   G F   + + +V E+    +L  L +      V+    + F +Q    + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L +    +IH DLK  N+ L       +KI DFG +  +   G+       +  Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           L    +   +D+WSLGCIL  L  G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 83
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             +   + L +V E L+  +L +++  T    G    + ++  Q    AL FL S +  +
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 137
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
           IH D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y  
Sbjct: 138 IHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
            +D+WSLG + +E+  GEP +  +N
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 84
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             +   + L +V E L+  +L +++  T    G    + ++  Q    AL FL S +  +
Sbjct: 85  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
           IH D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y  
Sbjct: 139 IHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
            +D+WSLG + +E+  GEP +  +N
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNEN 221

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           + RY     LGKG F +  +  D + K   A K++  K   L   Q E    E      +
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            + ++V   G F   + + +V E+    +L  L +      V+    + F +Q    + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L +    +IH DLK  N+ L       +KI DFG +  +   G+       +  Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           L    +   +D+WSLGCIL  L  G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKAD 167
           D YE+  ++G G+   V  A+   +K +VAIK I  +K    +++   E+Q + + +  +
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG------VSLNLTKKFAQQ 220
           I S Y       F  K+ L LV +LLS  ++ ++I++    G      +  +      ++
Sbjct: 75  IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--------QTLYQ 272
           +   L +L       IH D+K  NILL   +  +++I DFG S  +         +    
Sbjct: 130 VLEGLEYLHKN--GQIHRDVKAGNILLG--EDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 273 YIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTG 309
           ++ +  + +PEV+  +  YD   D+WS G   +EL TG
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           + RY     LGKG F +  +  D + K   A K++  K   L   Q E    E      +
Sbjct: 41  MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEKMSTEIAIHKSL 99
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            + ++V   G F   + + +V E+    +L  L +      V+    + F +Q    + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK--AVTEPEARYFMRQTIQGVQY 157
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L +    +IH DLK  N+ L       +KI DFG +  +   G+       +  Y +PEV
Sbjct: 158 LHNNR--VIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEV 213
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
           L    +   +D+WSLGCIL  L  G+P F
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN 151
           G  D   D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   
Sbjct: 11  GSRDAADDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQ 62
Query: 152 QAQI---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFH 207
           Q Q    EV +L K    +I     +   G+ T    L +V +     +LY+     + H
Sbjct: 63  QLQAFKNEVGVLRKTRHVNI-----LLFMGYST-APQLAIVTQWCEGSSLYH-----HLH 111
Query: 208 GVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
                   K     A+Q    + +L +   SIIH DLK  NI L   + + +KI DFG  
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNTVKIGDFGLA 167
Query: 262 ---SSCHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSG 315
              S         Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S 
Sbjct: 168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
Query: 316 KNEVDQMTKIIEVLG 330
            N  DQ   IIE++G
Sbjct: 228 INNRDQ---IIEMVG 239

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 92  GHDDENYDYIIKHGEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF 149
           GH   NYD      +  ++R +I     LG G +G+V +    +    VA+K +K     
Sbjct: 1   GHMSPNYD------KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---- 50
Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
            +  ++E  L E     +I    +V+L G  T +    ++ E ++Y NL + +R  N   
Sbjct: 51  -DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 109
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVG 267
           V+  +    A Q+  A+ +L     + IH DL   N L+   +   +K+ DFG S    G
Sbjct: 110 VNAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG 165
Query: 268 QTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            T      +++   + +PE L    + +  D+W+ G +L E+ T
Sbjct: 166 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 38/236 (16%)
Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           +EI  ++G+G+FG+V             +K+    K F  +   + ++L++   A     
Sbjct: 76  FEILKVIGRGAFGEVA-----------VVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
             V + G   W   L   F+    NLY L+ +    G  L L  KF  +L   +A     
Sbjct: 125 RDVLVNGDSKWITTLHYAFQD-DNNLY-LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA 182
Query: 232 ELSI----------IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
           E+ I          +H D+KP+NIL+       I++ DFGS   + +     +QS     
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILM--DMNGHIRLADFGSCLKLMED--GTVQSSVAVG 238
Query: 279 ---YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
              Y SPE+L  +      Y    D WSLG  + E+  GE  F  ++ V+   KI+
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 28/209 (13%)
Query: 108 FLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
            +D Y++ + +LG G  G+V++ F+   + + A+K++++      +A+ EV+L  + ++ 
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQC 70
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               R +   +  +  +  L +V E L    L++ I++      +     +  + +  A+
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAI-KIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
            +L S  ++I H D+KPEN+L  S + +AI K+ DFG +                     
Sbjct: 131 QYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------ 170
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLF 313
             G  YD + DMWSLG I+  L  G P F
Sbjct: 171 -TGEKYDKSCDMWSLGVIMYILLCGYPPF 198

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
           +F D Y++ + +LG+G+  +V    +     + A+KII+ K+P   ++++  EV++L + 
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
                  R +++L   F  ++   LVFE +     L ++ +  +F+ +  ++     Q +
Sbjct: 68  QG----HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFG--------SSCHVGQT--L 270
             AL FL +    I H DLKPENIL   P + S +KI DFG          C    T  L
Sbjct: 121 ASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 271 YQYIQSRYYRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
                S  Y +PEV+         YD   D+WSLG IL  L +G P F G+   D
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKAD 167
           D YE+  ++G G+   V  A+   +K +VAIK I  +K    +++   E+Q + + +  +
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG------VSLNLTKKFAQQ 220
           I S Y       F  K+ L LV +LLS  ++ ++I++    G      +  +      ++
Sbjct: 70  IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--------QTLYQ 272
           +   L +L       IH D+K  NILL   +  +++I DFG S  +         +    
Sbjct: 125 VLEGLEYLHKN--GQIHRDVKAGNILLG--EDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 273 YIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTG 309
           ++ +  + +PEV+  +  YD   D+WS G   +EL TG
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L   + + I
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFI 379
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H +L   N L+   +   +K+ DFG S    G T   +  +++   + +PE L    + +
Sbjct: 380 HRNLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 438 KSDVWAFGVLLWEIAT 453

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G +G+V +    +    VA+K +K      +  ++E  L E     +I    +V+L 
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
           G  T +    ++ E ++Y NL + +R  N   V+  +    A Q+  A+ +L     + I
Sbjct: 77  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--NFI 134
Query: 237 HCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRY---YRSPEVLLGIPYDL 292
           H DL   N L+   +   +K+ DFG S    G T      +++   + +PE L    + +
Sbjct: 135 HRDLAARNCLVG--ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 293 AIDMWSLGCILVELHT 308
             D+W+ G +L E+ T
Sbjct: 193 KSDVWAFGVLLWEIAT 208

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 95  DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
           D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   Q Q
Sbjct: 3   DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 54
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHG 208
               EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T F  
Sbjct: 55  AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SS 263
           + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG     S 
Sbjct: 109 IKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSR 161
Query: 264 CHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
                   Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N  D
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 321 QMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
           Q   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 222 Q---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 262

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 50/277 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           LG G+FG V    +     +  IK I   +++ P + Q + E+++L+ ++  +I     +
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKSLDHPNI-----I 83
Query: 175 KLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLN--LTKKFAQQLCCALAFLSSP 231
           K+   F   +++ +V E      L   I +    G +L+     +  +Q+  ALA+  S 
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 232 ELSIIHCDLKPENILL--CSPKRSAIKIIDFG----------SSCHVGQTLYQYIQSRYY 279
              ++H DLKPENIL    SP  S IKIIDFG          S+   G  LY        
Sbjct: 144 H--VVHKDLKPENILFQDTSP-HSPIKIIDFGLAELFKSDEHSTNAAGTALYM------- 193
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN--EVDQMTKIIEVLGMPPGYLL 337
            +PEV          D+WS G ++  L TG   F+G +  EV Q     E     P Y +
Sbjct: 194 -APEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-----PNYAV 246
Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
                T +  D       +LK+      ER P + ++
Sbjct: 247 ECRPLTPQAVD-------LLKQMLTKDPERRPSAAQV 276

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 95  DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQ 154
           D + D+ I  G+       +   +G GSFG V K   H +   VA+K++    P   Q Q
Sbjct: 3   DSSDDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ 54
Query: 155 I---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHG 208
               EV +L K    +I     +   G+ T K  L +V +     +LY+   I  T F  
Sbjct: 55  AFKNEVGVLRKTRHVNI-----LLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM 108
Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SS 263
           + L      A+Q    + +L +   SIIH DLK  NI L   +   +KI DFG     S 
Sbjct: 109 IKL---IDIARQTAQGMDYLHAK--SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSR 161
Query: 264 CHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
                   Q   S  + +PEV+      PY    D+++ G +L EL TG+  +S  N  D
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 321 QMTKIIEVLGMPPGYLLHGASKT----SKYFDRLSDNSYVLKKSTDTR 364
           Q   II ++G   GYL    SK      K   RL   +  LKK  D R
Sbjct: 222 Q---IIFMVGR--GYLSPDLSKVRSNCPKAMKRLM--AECLKKKRDER 262

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           +G+G+ G V  A D     +VAI+ +  ++    +  I   L+ + NK    +  IV   
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK----NPNIVNYL 84
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSI 235
             +   + L +V E L+  +L +++  T    G    + ++  Q    AL FL S +  +
Sbjct: 85  DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----ALEFLHSNQ--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVLLGIPYDL 292
           IH ++K +NILL      ++K+ DFG    +     +    + + Y+ +PEV+    Y  
Sbjct: 139 IHRNIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 293 AIDMWSLGCILVELHTGEPLFSGKN 317
            +D+WSLG + +E+  GEP +  +N
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNEN 221

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG+G++G VV+   H    Q+ A+K I+       Q ++ + L   I+   +   + V  
Sbjct: 59  LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 115
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
            G    +  + +  EL+  +L    +     G ++  ++  K A  +  AL  L S +LS
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 174
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
           +IH D+KP N+L+ +     +K+ DFG S ++  ++ + I +  + Y +PE     L   
Sbjct: 175 VIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
            Y +  D+WSLG  ++EL     P  S      Q+ +++E
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
           +G GSFG V K   H +   VA+K++    P   Q Q    EV +L K    +I     +
Sbjct: 18  IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 69
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
              G+ T K  L +V +     +LY+   I  T F  + L      A+Q    + +L + 
Sbjct: 70  LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 125
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
             SIIH DLK  NI L   +   +KI DFG     S         Q   S  + +PEV+ 
Sbjct: 126 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 287 ---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PY    D+++ G +L EL TG+  +S  N  DQ   II ++G   GYL    SK 
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 236
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
                K   RL   +  LKK  D R
Sbjct: 237 RSNCPKAMKRLM--AECLKKKRDER 259

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
           +G GSFG V K   H +   VA+K++    P   Q Q    EV +L K    +I     +
Sbjct: 16  IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
              G+ T K  L +V +     +LY+   I  T F  + L      A+Q    + +L + 
Sbjct: 68  LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
             SIIH DLK  NI L   +   +KI DFG     S         Q   S  + +PEV+ 
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PY    D+++ G +L EL TG+  +S  N  DQ   II ++G   GYL    SK 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
                K   RL   +  LKK  D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHS 170
           +G+G+FG+V +A       +E    VA+K++K +     QA  Q E  L+ + +  +I  
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-- 112
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVS----LNLTKK--------- 216
              VKL G       +CL+FE ++Y +L   +R+ + H V      +L+ +         
Sbjct: 113 ---VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 217 ---FAQQLCCA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
               A+QLC A      +A+LS  E   +H DL   N L+   +   +KI DFG S ++ 
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS--ERKFVHRDLATRNCLV--GENMVVKIADFGLSRNIY 225
Query: 268 QTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
              Y        I  R+   PE +    Y    D+W+ G +L E+ +
Sbjct: 226 SADYYKADGNDAIPIRWM-PPESIFYNRYTTESDVWAYGVVLWEIFS 271

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
           +G GSFG V K   H +   VA+K++    P   Q Q    EV +L K    +I     +
Sbjct: 16  IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
              G+ T K  L +V +     +LY+   I  T F  + L      A+Q    + +L + 
Sbjct: 68  LFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
             SIIH DLK  NI L   +   +KI DFG     S         Q   S  + +PEV+ 
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PY    D+++ G +L EL TG+  +S  N  DQ   II ++G   GYL    SK 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
                K   RL   +  LKK  D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
                +IVKL G  T +N + ++ EL +   L + ++   F   SL+L     +A QL  
Sbjct: 447 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 502
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
           ALA+L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      
Sbjct: 503 ALAYLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 557
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           + +PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 615

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           D +EI  ++G+G+F +V      ++  QV    I NK   L + ++     E+    +  
Sbjct: 61  DDFEILKVIGRGAFSEVA-VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 170 SRYIVKLKGHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            R+I +L   F  +N+L LV E  +  +L  L+       +   + + +  ++  A+   
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAID-- 176
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQ--SRYYRSPEV 284
           S   L  +H D+KP+NILL   +   I++ DFGS        T+   +   +  Y SPE+
Sbjct: 177 SVHRLGYVHRDIKPDNILL--DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 285 LLGIPYDLA-------IDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           L  +             D W+LG    E+  G+  F   +  +   KI+
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKK----PFLNQAQIEVQL 159
           G   +  Y +   LG G+FG+V K   HE    +VA+KI+  +K      + + + E+Q 
Sbjct: 11  GRVKIGHYILGDTLGVGTFGKV-KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA 218
           L+          +I+KL    +  + + +V E +S   L++ I       +    +++  
Sbjct: 70  LKLFRHP-----HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLF 122
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
           QQ+   + +       ++H DLKPEN+LL +   +  KI DFG S  +  G+ L     S
Sbjct: 123 QQILSGVDYCH--RHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRXSCGS 178
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
             Y +PEV+ G  Y    +D+WS G IL  L  G   F   +      KI + +   P Y
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY 238
Query: 336 L 336
           L
Sbjct: 239 L 239

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 12  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 68
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 69  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 128 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 182
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 237

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 67  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 126 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 180
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-EVQLLEKI----NK 165
           R  +  +L +G F  V +A D     + A+K + + +   N+A I EV  ++K+    N 
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQLCCA 224
               S   +  +   T +    L+ EL    L   ++     G +S +   K   Q C A
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-TLYQYIQSR------ 277
           +  +   +  IIH DLK EN+LL +  +  IK+ DFGS+  +     Y +   R      
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSN--QGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 278 --------YYRSPEVL---LGIPYDLAIDMWSLGCIL 303
                    YR+PE++      P     D+W+LGCIL
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 13  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 69
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 70  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 129 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 183
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 238

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 38  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 94
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 95  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 154 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 208
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 263

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 67  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 126 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 180
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 71
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 72  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 131 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 185
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKI--IEVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 240

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTMR 63
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                +IVKL G  T +N + ++ EL +            + + L     +A QL  ALA
Sbjct: 64  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRS 281
           +L S     +H D+   N+L+ S     +K+ DFG S ++  + Y Y  S+      + +
Sbjct: 123 YLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMA 177
Query: 282 PEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 232

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 107 KFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
           +F D Y++ + +LG+G+  +V    +     + A+KII+ K+P   ++++  EV++L + 
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQC 67
Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQL 221
                  R +++L   F  ++   LVFE +     L ++ +  +F+ +  ++     Q +
Sbjct: 68  QG----HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV---VQDV 120
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDF--GSS------CHVGQT--L 270
             AL FL +    I H DLKPENIL   P + S +KI DF  GS       C    T  L
Sbjct: 121 ASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 271 YQYIQSRYYRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
                S  Y +PEV+         YD   D+WSLG IL  L +G P F G+   D
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
           +++H DLKP N+ L    +  +K+ DFG +    H      +++ + YY SPE +  + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +   D+WSLGC+L EL    P F+  ++ +   KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 40/257 (15%)
Query: 81  NKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAFDH-----E 133
           +  E K     GH  EN  Y        + R +I     LG+G+FG+V  A  H     +
Sbjct: 10  SPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQ 69
Query: 134 EKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
           +K  VA+K +K       Q  Q E +LL  +       ++IV+  G  T    L +VFE 
Sbjct: 70  DKMLVAVKALKEASESARQDFQREAELLTMLQH-----QHIVRFFGVCTEGRPLLMVFEY 124
Query: 193 LSYNLYNLIRNTNFHG----------------VSLNLTKKFAQQLCCALAFLSSPELSII 236
           + +   +L R    HG                + L      A Q+   + +L+   L  +
Sbjct: 125 MRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG--LHFV 180
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLLGIPYD 291
           H DL   N L+   +   +KI DFG S  +  T Y  +  R      +  PE +L   + 
Sbjct: 181 HRDLATRNCLVG--QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 292 LAIDMWSLGCILVELHT 308
              D+WS G +L E+ T
Sbjct: 239 TESDVWSFGVVLWEIFT 255

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
           LG+GSFG+V +  D +   Q A+K ++          +EV ++ E +  A + S  IV L
Sbjct: 80  LGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 129
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G       + +  ELL   +L  LI+      +  +    +  Q    L +L +    I
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 185
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
           +H D+K +N+LL S   S   + DFG + C     +G++L    YI  +  + +PEV++G
Sbjct: 186 LHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
            P D  +D+WS  C+++ +  G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            ++ EI  L+GKG FGQV     H E   VAI++I  ++   N+ Q++    E +     
Sbjct: 32  FEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERD--NEDQLKAFKREVMAYRQT 86
Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
               +V   G      HL ++  L     LY+++R+     + +N T++ AQ++   + +
Sbjct: 87  RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV-LDVNKTRQIAQEIVKGMGY 145
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQ----YIQSRY--Y 279
           L +    I+H DLK +N+   + K   + I DFG  S   V Q   +     IQ+ +  +
Sbjct: 146 LHAK--GILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
Query: 280 RSPEVLLG---------IPYDLAIDMWSLGCILVELHTGEPLF 313
            +PE++           +P+    D+++LG I  ELH  E  F
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLL 160
           G   +  Y +   LG G+FG+V          +VA+KI+  +K      + + + E+Q L
Sbjct: 6   GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFA 218
           +          +I+KL    +      +V E +S   L++ I     HG V     ++  
Sbjct: 66  KLFRHP-----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLF 117
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
           QQ+  A+ +       ++H DLKPEN+LL +   +  KI DFG S  +  G+ L     S
Sbjct: 118 QQILSAVDYCHRH--MVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRDSCGS 173
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
             Y +PEV+ G  Y    +D+WS G IL  L  G   F  ++      KI   +   P Y
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 336 L 336
           L
Sbjct: 234 L 234

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
                +IVKL G  T +N + ++ EL +   L + ++   F   SL+L     +A QL  
Sbjct: 447 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 502
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
           ALA+L S     +H D+   N+L+ +     +K+ DFG S ++  + Y Y  S+      
Sbjct: 503 ALAYLESKRF--VHRDIAARNVLVSA--TDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 557
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           + +PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 615

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ++ +LG+G FG+V +    +H+ EK  VA+K  K      NK+ F+++A I         
Sbjct: 12  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 62
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
             ++   +IVKL G      TW     ++ EL  Y         N + + +     ++ Q
Sbjct: 63  MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 117
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
           +C A+A+L S  ++ +H D+   NIL+ SP+   +K+ DFG S ++  +  Y+   +R  
Sbjct: 118 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
             + SPE +    +  A D+W     + E+ +   +P F  +N+
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 217

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG+G++G VV+   H    Q+ A+K I+       Q ++ + L   I+   +   + V  
Sbjct: 15  LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 71
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
            G    +  + +  EL+  +L    +     G ++  ++  K A  +  AL  L S +LS
Sbjct: 72  YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 130
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
           +IH D+KP N+L+ +     +K+ DFG S ++   + + I +  + Y +PE     L   
Sbjct: 131 VIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
            Y +  D+WSLG  ++EL     P  S      Q+ +++E
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 40/262 (15%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINK 165
           +F D YE+   +G GS+    +        + A+KII K+K+    + +I ++  +  N 
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPN- 77
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                  I+ LK  +    ++ +V EL     L + I    F          F+++   A
Sbjct: 78  -------IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF----------FSEREASA 120
Query: 225 LAFLSSPEL------SIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQY 273
           + F  +  +       ++H DLKP NIL    S    +I+I DFG +  +      L   
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMP 332
             +  + +PEVL    YD A D+WSLG +L    TG  P  +G +  D   +I+  +G  
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILARIGSG 238
Query: 333 PGYLLHGASKTSKYFDRLSDNS 354
              L  G      Y++ +SD +
Sbjct: 239 KFSLSGG------YWNSVSDTA 254

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 21/241 (8%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLL 160
           G   +  Y +   LG G+FG+V          +VA+KI+  +K      + + + E+Q L
Sbjct: 6   GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFA 218
           +          +I+KL    +      +V E +S   L++ I     HG V     ++  
Sbjct: 66  KLFRHP-----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLF 117
Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
           QQ+  A+ +       ++H DLKPEN+LL +   +  KI DFG S  +  G+ L     S
Sbjct: 118 QQILSAVDYCHRH--MVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRTSCGS 173
Query: 277 RYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
             Y +PEV+ G  Y    +D+WS G IL  L  G   F  ++      KI   +   P Y
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 336 L 336
           L
Sbjct: 234 L 234

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
           +++H DLKP N+ L    +  +K+ DFG +    H       ++ + YY SPE +  + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +   D+WSLGC+L EL    P F+  ++ +   KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ++ +LG+G FG+V +    +H+ EK  VA+K  K      NK+ F+++A I         
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 66
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
             ++   +IVKL G      TW     ++ EL  Y         N + + +     ++ Q
Sbjct: 67  MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 121
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
           +C A+A+L S  ++ +H D+   NIL+ SP+   +K+ DFG S ++  +  Y+   +R  
Sbjct: 122 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
             + SPE +    +  A D+W     + E+ +   +P F  +N+
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 114 IDTLLGKGSFGQVVKAF--DHE-EKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ++ +LG+G FG+V +    +H+ EK  VA+K  K      NK+ F+++A I         
Sbjct: 28  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVI--------- 78
Query: 165 KADIHSRYIVKLKGHF----TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
             ++   +IVKL G      TW     ++ EL  Y         N + + +     ++ Q
Sbjct: 79  MKNLDHPHIVKLIGIIEEEPTW-----IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 133
Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY- 278
           +C A+A+L S  ++ +H D+   NIL+ SP+   +K+ DFG S ++  +  Y+   +R  
Sbjct: 134 ICKAMAYLES--INCVHRDIAVRNILVASPE--CVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 279 --YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNE 318
             + SPE +    +  A D+W     + E+ +   +P F  +N+
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 233

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPY 290
           +++H DLKP N+ L    +  +K+ DFG +    H       ++ + YY SPE +  + Y
Sbjct: 136 TVLHRDLKPANVFL--DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +   D+WSLGC+L EL    P F+  ++ +   KI E
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSR 171
           LG+G+FG+V  A  H     ++K  VA+K +K       Q  Q E +LL  +       +
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH-----Q 74
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG----------------VSLNLTK 215
           +IV+  G  T    L +VFE + +   +L R    HG                + L    
Sbjct: 75  HIVRFFGVCTEGRPLLMVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             A Q+   + +L+   L  +H DL   N L+   +   +KI DFG S  +  T Y  + 
Sbjct: 133 AVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            R      +  PE +L   +    D+WS G +L E+ T
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
           +G+GSFG+V +  D +   Q A+K ++          +EV ++ E +  A + S  IV L
Sbjct: 66  VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 115
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G       + +  ELL   +L  LI+      +  +    +  Q    L +L +    I
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 171
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
           +H D+K +N+LL S   S   + DFG + C     +G++L    YI  +  + +PEV++G
Sbjct: 172 LHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
            P D  +D+WS  C+++ +  G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSR 171
           LG+G+FG+V  A  H     ++K  VA+K +K       Q  Q E +LL  +       +
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH-----Q 80
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG----------------VSLNLTK 215
           +IV+  G  T    L +VFE + +   +L R    HG                + L    
Sbjct: 81  HIVRFFGVCTEGRPLLMVFEYMRHG--DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             A Q+   + +L+   L  +H DL   N L+   +   +KI DFG S  +  T Y  + 
Sbjct: 139 AVASQVAAGMVYLAG--LHFVHRDLATRNCLV--GQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            R      +  PE +L   +    D+WS G +L E+ T
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 46/231 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
           LG+G FG+VVKA     K +     VA+K++K N  P  L     E  +L+++N      
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
            +++KL G  +    L L+ E   Y +L   +R +   G                     
Sbjct: 87  -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            +++     FA Q+   + +L+  E+S++H DL   NIL+   ++  +KI DFG S  V 
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +  +  +  Q R    + + E L    Y    D+WS G +L E+ T  G P
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEKINKADIHSRYIV 174
           +G GSFG V K   H +   VA+K++    P   Q Q    EV +L K    +I     +
Sbjct: 16  IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----L 67
Query: 175 KLKGHFTWKNHLCLVFELL-SYNLYNL--IRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
              G+ T    L +V +     +LY+   I  T F  + L      A+Q    + +L + 
Sbjct: 68  LFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAK 123
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYIQSRYYRSPEVLL 286
             SIIH DLK  NI L   +   +KI DFG     S         Q   S  + +PEV+ 
Sbjct: 124 --SIIHRDLKSNNIFLH--EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 287 GI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
                PY    D+++ G +L EL TG+  +S  N  DQ   II ++G   GYL    SK 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVGR--GYLSPDLSKV 234
Query: 344 ----SKYFDRLSDNSYVLKKSTDTR 364
                K   RL   +  LKK  D R
Sbjct: 235 RSNCPKAMKRLM--AECLKKKRDER 257

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 19/234 (8%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL---NQAQI--EVQLLE 161
           K + +Y +  LLG+GS+G+V +  D E  C+ A+KI+K KK       +A +  E+QLL 
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           ++   ++     V        K  + +V E     +  ++ +       +     +  QL
Sbjct: 62  RLRHKNVIQLVDVLYNEE---KQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH---VGQTLYQYIQSRY 278
              L +L S    I+H D+KP N+LL +     I  +    + H      T      S  
Sbjct: 119 IDGLEYLHS--QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 279 YRSPEVLLGIPY--DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
           ++ PE+  G+       +D+WS G  L  + TG   F G    D + K+ E +G
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIG 226

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEV-QLLEKINKADIHSRYIVKL 176
           +G+GSFG+V +  D +   Q A+K ++          +EV ++ E +  A + S  IV L
Sbjct: 82  VGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVPL 131
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G       + +  ELL   +L  LI+      +  +    +  Q    L +L +    I
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHT--RRI 187
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSS-C----HVGQTLYQ--YI-QSRYYRSPEVLLG 287
           +H D+K +N+LL S    A  + DFG + C     +G++L    YI  +  + +PEV++G
Sbjct: 188 LHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
            P D  +D+WS  C+++ +  G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 48/232 (20%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
           LG+G FG+VVKA     K +     VA+K++K N  P  L     E  +L+++N      
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
            +++KL G  +    L L+ E   Y +L   +R +   G                     
Sbjct: 87  -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            +++     FA Q+   + +L+  E+ ++H DL   NIL+   ++  +KI DFG S  V 
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 QTLYQYIQSRYYRSPEVLLGIP------YDLAIDMWSLGCILVELHT--GEP 311
           +    Y++    R P   + I       Y    D+WS G +L E+ T  G P
Sbjct: 202 EE-DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 28/239 (11%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
                +IVKL G  T +N + ++ EL +   L + ++   F   SL+L     +A QL  
Sbjct: 67  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 122
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----Y 278
           ALA+L S     +H D+   N+L+ +     +K+ DFG S ++  + Y Y  S+      
Sbjct: 123 ALAYLESKRF--VHRDIAARNVLVSA--TDCVKLGDFGLSRYMEDSTY-YKASKGKLPIK 177
Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
           + +PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAI------KIIKNKKPFLNQAQIEVQLLEKINKAD 167
            D  +G+GSF  V K  D E   +VA       K+ K+++    +    ++ L+  N   
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFEL-LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            +  +   +KG    K  + LV EL  S  L   ++   F    + + + + +Q+   L 
Sbjct: 90  FYDSWESTVKG----KKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQILKGLQ 143
Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTLYQYIQSRYYRSPEVL 285
           FL +    IIH DLK +NI +  P  S +KI D G ++          I +  + +PE  
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVIGTPEFXAPEXY 202
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
               YD ++D+++ G   +E  T E  +S      Q+ + +   G+ P 
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV-TSGVKPA 249

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 139 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           + +LG GS G VV     + +     +++ +   F + A +E++LL    ++D H   ++
Sbjct: 38  EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLL---TESDDHPN-VI 90
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
           +     T    L +  EL + NL +L+ + N    +L L K++      +Q+   +A L 
Sbjct: 91  RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
           S  L IIH DLKP+NIL+ +  R             I I DFG       GQ  ++    
Sbjct: 151 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 274 --IQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
               +  +R+PE+L          +ID++S+GC+ 
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           + +LG GS G VV     + +     +++ +   F + A +E++LL    ++D H   ++
Sbjct: 38  EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLL---TESDDHPN-VI 90
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
           +     T    L +  EL + NL +L+ + N    +L L K++      +Q+   +A L 
Sbjct: 91  RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
           S  L IIH DLKP+NIL+ +  R             I I DFG       GQ  ++    
Sbjct: 151 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 274 --IQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
               +  +R+PE+L          +ID++S+GC+ 
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 138
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 139 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF 217

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 28  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 87  HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 142
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 143 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPF 221

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +GKG FG V+   D+    +VA+K IKN    + FL +A +  QL         HS  + 
Sbjct: 20  IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 69
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L      K  L +V E ++  +L + +R+     +  +   KF+  +C A+ +L     
Sbjct: 70  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 127
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + +H DL   N+L+   + +  K+ DFG +     T         + +PE L    +   
Sbjct: 128 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+++
Sbjct: 186 SDVWSFGILLWEIYS 200

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 162
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 163 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPF 241

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 46  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 160
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 161 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPF 239

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
            LGKG F +  +  D + K   A KI+  K   L   Q E   +E      +  +++V  
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G F   + + +V EL    +L  L +      ++    + + +Q+     +L      +
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR--V 136
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLGIPYDL 292
           IH DLK  N+ L   +   +KI DFG +  V   G+       +  Y +PEVL    +  
Sbjct: 137 IHRDLKLGNLFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 293 AIDMWSLGCILVELHTGEPLF 313
            +D+WS+GCI+  L  G+P F
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPF 215

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +GKG FG V+   D+    +VA+K IKN    + FL +A +  QL         HS  + 
Sbjct: 29  IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 78
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L      K  L +V E ++  +L + +R+     +  +   KF+  +C A+ +L     
Sbjct: 79  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + +H DL   N+L+   + +  K+ DFG +     T         + +PE L    +   
Sbjct: 137 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+++
Sbjct: 195 SDVWSFGILLWEIYS 209

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           + +LG GS G VV     + +  VA+K  +    F + A +E++LL    ++D H   ++
Sbjct: 20  EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLL---TESDDHPN-VI 72
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
           +     T    L +  EL + NL +L+ + N    +L L K++      +Q+   +A L 
Sbjct: 73  RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
           S  L IIH DLKP+NIL+ +  R             I I DFG       GQ+ ++    
Sbjct: 133 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 274 --IQSRYYRSPEVL-----LGIPYDL--AIDMWSLGCIL 303
               +  +R+PE+L     L     L  +ID++S+GC+ 
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 46/231 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----VAIKIIK-NKKPF-LNQAQIEVQLLEKINKADIHS 170
           LG+G FG+VVKA     K +     VA+K++K N  P  L     E  +L+++N      
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP---- 86
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG--------------------- 208
            +++KL G  +    L L+ E   Y +L   +R +   G                     
Sbjct: 87  -HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 209 -VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            +++     FA Q+   + +L+  E+ ++H DL   NIL+   ++  +KI DFG S  V 
Sbjct: 146 ALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRK--MKISDFGLSRDVY 201
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +  +  +  Q R    + + E L    Y    D+WS G +L E+ T  G P
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
           +RY +   +G GSFG +    D     +VAIK+  +K K P   Q  IE     KI K  
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIE----SKIYKMM 61
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                I  ++      ++  +V ELL  +L +L  N      SL      A Q+   + +
Sbjct: 62  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 120
Query: 228 LSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
           + S   + IH D+KP+N L+   K+   + IIDFG +  +     +Q+I  R        
Sbjct: 121 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
             Y S    LGI      D+ SLG +L+  + G   + G                +M+  
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
           IEVL  G P  +  +     S  FD   D SY+
Sbjct: 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKIN 164
           ++L  +E    LG+G FG V +A +  + C  AIK I+  N++    +   EV+ L K+ 
Sbjct: 2   RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 165 KADIHSRYIVKLKGHFTWK-------------NHLCLVFELLSYNLYNLIRNTNFHGVSL 211
              I   +   L+ + T K               LC    L  +             V L
Sbjct: 62  HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---------- 261
           ++  + A+    A+ FL S    ++H DLKP NI         +K+ DFG          
Sbjct: 122 HIFLQIAE----AVEFLHSK--GLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEE 173
Query: 262 ----------SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP 311
                      + H GQ     + ++ Y SPE + G  Y   +D++SLG IL EL     
Sbjct: 174 EQTVLTPMPAYARHTGQ-----VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL----- 223
Query: 312 LFSGKNEVDQMTKIIEV--LGMPP 333
           L+    +++++  + +V  L  PP
Sbjct: 224 LYPFSTQMERVRTLTDVRNLKFPP 247

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 39/219 (17%)
Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           + +LG GS G VV     + +  VA+K  +    F + A +E++LL    ++D H   ++
Sbjct: 20  EKILGYGSSGTVVFQGSFQGR-PVAVK--RMLIDFCDIALMEIKLL---TESDDHPN-VI 72
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF-----AQQLCCALAFLS 229
           +     T    L +  EL + NL +L+ + N    +L L K++      +Q+   +A L 
Sbjct: 73  RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 230 SPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFG--SSCHVGQTLYQY--- 273
           S  L IIH DLKP+NIL+ +  R             I I DFG       GQ  ++    
Sbjct: 133 S--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 274 --IQSRYYRSPEVL-----LGIPYDL--AIDMWSLGCIL 303
               +  +R+PE+L     L     L  +ID++S+GC+ 
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
           LG+G FG+V +  +D E      QVA+K +K +    + A +  E+++L      +++  
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR-----NLYHE 83
Query: 172 YIVKLKGHFT--WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
            IVK KG  T    N + L+ E L           N + ++L    K+A Q+C  + +L 
Sbjct: 84  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSR----YYRSPE 283
           S +   +H DL   N+L+ S     +KI DFG   +    +        R    ++ +PE
Sbjct: 144 SRQY--VHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
            L+   + +A D+WS G  L EL T
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
           +RY +   +G GSFG +    D     +VAIK+  +K K P   Q  IE     KI K  
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP---QLHIE----SKIYKMM 59
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                I  ++      ++  +V ELL  +L +L  N      SL      A Q+   + +
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 118
Query: 228 LSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
           + S   + IH D+KP+N L+    K + + IIDFG +  +     +Q+I  R        
Sbjct: 119 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
             Y S    LGI      D+ SLG +L+  + G   + G                +M+  
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
           IEVL  G P  +  +     S  FD   D SY+
Sbjct: 237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 269

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 34/253 (13%)
Query: 105 GEKFLDRYEIDTL--LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           G   L R EI  L  LG G FG VVK    + +  VA+K+IK      ++   E Q + K
Sbjct: 1   GHMELKREEITLLKELGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMK 59
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQ 219
           ++    H + +VK  G  + +  + +V E +S   L N +R+   HG  L  ++  +   
Sbjct: 60  LS----HPK-LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCY 111
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
            +C  +AFL S +   IH DL   N L+   +   +K+ DFG + +V     QY+ S   
Sbjct: 112 DVCEGMAFLESHQF--IHRDLAARNCLV--DRDLCVKVSDFGMTRYVLDD--QYVSSVGT 165
Query: 278 ----YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
                + +PEV     Y    D+W+ G ++ E+ +      GK   D  T    VL +  
Sbjct: 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS-----LGKMPYDLYTNSEVVLKVSQ 220
Query: 334 GYLL---HGASKT 343
           G+ L   H AS T
Sbjct: 221 GHRLYRPHLASDT 233

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +GKG FG V+   D+    +VA+K IKN    + FL +A +  QL         HS  + 
Sbjct: 201 IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 250
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L      K  L +V E ++  +L + +R+     +  +   KF+  +C A+ +L     
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 308
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + +H DL   N+L+   + +  K+ DFG +     T         + +PE L    +   
Sbjct: 309 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+++
Sbjct: 367 SDVWSFGILLWEIYS 381

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVKL 176
           LG+GSFG+V +  D +   Q A+K ++          +EV   E++   A + S  IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 150
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G       + +  ELL   +L  L++      +  +    +  Q    L +L S    I
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS--RRI 206
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQ--YIQ-SRYYRSPEVLLG 287
           +H D+K +N+LL S   S   + DFG +       +G++L    YI  +  + +PEV+LG
Sbjct: 207 LHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
              D  +D+WS  C+++ +  G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +GKG FG V+   D+    +VA+K IKN    + FL +A +  QL         HS  + 
Sbjct: 14  IGKGEFGDVMLG-DYRGN-KVAVKCIKNDATAQAFLAEASVMTQLR--------HSNLVQ 63
Query: 175 KLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
            L      K  L +V E ++  +L + +R+     +  +   KF+  +C A+ +L     
Sbjct: 64  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 121
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLA 293
           + +H DL   N+L+   + +  K+ DFG +     T         + +PE L    +   
Sbjct: 122 NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+++
Sbjct: 180 SDVWSFGILLWEIYS 194

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSR 171
           LG+G FG+V +  +D E      QVA+K +K +    + A +  E+++L      +++  
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR-----NLYHE 71
Query: 172 YIVKLKGHFT--WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
            IVK KG  T    N + L+ E L           N + ++L    K+A Q+C  + +L 
Sbjct: 72  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSR----YYRSPE 283
           S +   +H DL   N+L+ S     +KI DFG   +    +        R    ++ +PE
Sbjct: 132 SRQY--VHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT 308
            L+   + +A D+WS G  L EL T
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 15  YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 68  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 15  YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 67
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 68  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 127
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 183
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 26/238 (10%)
Query: 110 DRYEIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           +R E+   +G+G FG V +            VAIK  KN     + +  E  L E +   
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
                +IVKL G  T +N + ++ EL +   L + ++   F   SL+L     +A QL  
Sbjct: 67  QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLST 122
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY---Y 279
           ALA+L S     +H D+   N+L+ S     +K+ DFG S ++   T  +  + +    +
Sbjct: 123 ALAYLESKRF--VHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVE--LHTGEPLFSGKNEVDQMTKII--EVLGMPP 333
            +PE +    +  A D+W  G  + E  +H  +P F G    D + +I   E L MPP
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPP 235

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 117 LLGKGSFGQVVKAF---DHEE-KCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADIHSR 171
           +LG G+FG V K     D E  K  VAIK+++ N  P  N+  ++    E    A + S 
Sbjct: 24  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD----EAYVMAGVGSP 79
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
           Y+ +L G     + + LV +L+ Y  L + +R       S +L   +  Q+   +++L  
Sbjct: 80  YVSRLLG-ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQIAKGMSYLE- 136
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRY---YRSPEVL 285
            ++ ++H DL   N+L+ SP    +KI DFG +    + +T Y     +    + + E +
Sbjct: 137 -DVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPP 333
           L   +    D+WS G  + EL T G   + G    E+  + +  E L  PP
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPP 244

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSRY----------YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           DFG    +G+ L    ++ Y          + SPE +    +  A D+WS G +L E+ +
Sbjct: 190 DFG----LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 309 -GEPLFSGKNEVDQMTKIIEVLGMPP 333
            GE  +   +  D +  + E   +PP
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPP 271

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 9   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 62  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
           LG+G+FG+V  A        ++K  VA+K +K+     +K F  +A++           +
Sbjct: 21  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL---------LTN 71
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL-------NLTKK--- 216
           +   +IVK  G     + L +VFE + + +L   +R      V +        LT+    
Sbjct: 72  LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 217 -FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
             AQQ+   + +L+S     +H DL   N L+   +   +KI DFG S  V  T Y  + 
Sbjct: 132 HIAQQIAAGMVYLASQHF--VHRDLATRNCLV--GENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 276 SRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFS-GKNEVDQMTKIIE 327
                   +  PE ++   +    D+WSLG +L E+ T   +P +    NEV +      
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR 247
Query: 328 VLGMP 332
           VL  P
Sbjct: 248 VLQRP 252

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 8   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 61  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 5   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 57
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 58  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 117
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 173
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 174 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 8   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 60
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 61  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 176
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 32  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 81
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 82  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V    Y   + S++   +  PEVL+  
Sbjct: 141 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVKL 176
           LG+GSFG+V +  D +   Q A+K ++          +EV   E++   A + S  IV L
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVKKVR----------LEVFRAEELMACAGLTSPRIVPL 131
Query: 177 KGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
            G       + +  ELL   +L  L++      +  +    +  Q    L +L S    I
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHS--RRI 187
Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSC-----HVGQTLYQ--YIQ-SRYYRSPEVLLG 287
           +H D+K +N+LL S   S   + DFG +       +G+ L    YI  +  + +PEV+LG
Sbjct: 188 LHGDVKADNVLLSS-DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 288 IPYDLAIDMWSLGCILVELHTG 309
              D  +D+WS  C+++ +  G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 17  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 66
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 67  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLL 286
              +H DL   N L+    +  +K+ DFG S +V     +Y  SR       +  PEVL+
Sbjct: 126 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDD--EYTSSRGSKFPVRWSPPEVLM 179
Query: 287 GIPYDLAIDMWSLGCILVELHT 308
              +    D+W+ G ++ E+++
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYS 201

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 12  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 61
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V    Y   + S++   +  PEVL+  
Sbjct: 121 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRN-----TNFHGVSLNLTK 215
           I     H   +V L G  T     L ++ E   + NL   +R+       +     +L K
Sbjct: 89  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 216 KF--AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
            F   + L C        + FL+S     IH DL   NILL   +++ +KI DFG    +
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFG----L 196
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L         H + +
Sbjct: 15  IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 64
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLVFE + +   +    T     +          +C  +A+L   E 
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 122
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
           S+IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 123 SVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 178
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 37  YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 89
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 90  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 149
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 150 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 205
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 206 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 64  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 124 IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG    +
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 231
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 23  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 72
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 73  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V    Y   + S++   +  PEVL+  
Sbjct: 132 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 188 KFSSKSDIWAFGVLMWEIYS 207

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 17  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 66
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 67  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V    Y   + S++   +  PEVL+  
Sbjct: 126 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 16  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 65
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 66  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V    Y   + S++   +  PEVL+  
Sbjct: 125 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 181 KFSSKSDIWAFGVLMWEIYS 200

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VAIK +       N+A    + +E +N+A +   +
Sbjct: 20  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 72
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      ++ EL++  +L + +R        N      SL+   + A 
Sbjct: 73  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H DL   N ++   +   +KI DFG +  + +T Y     + +
Sbjct: 133 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + SPE L    +    D+WS G +L E+ T
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 87  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG    +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 194
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle Checkpoint Kinase Bub Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 117 LLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
           LLG+G+F QV +A      D + K +  +K+ K   P+  +  I  QL+E++  +  H  
Sbjct: 72  LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW--EFYIGTQLMERLKPSMQH-- 127
Query: 172 YIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
             +K      ++N   LV EL SY    N  NL +NT    +   L   FA ++   +  
Sbjct: 128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ 187
Query: 228 LSSPELSIIHCDLKPENILLCSP---------KRSAIKIIDFGSSCHV-----GQTLYQY 273
           +   E  IIH D+KP+N +L +            + + +ID G S  +     G      
Sbjct: 188 VHDCE--IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCIL 303
            ++  ++  E+L   P++  ID + +   +
Sbjct: 246 CETSGFQCVEMLSNKPWNYQIDYFGVAATV 275

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 21  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 74  DNI-----VKYKGVCYSAGRRNLKLIMEFLPYG--SLREYLQKHKERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 21  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 74  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VAIK +       N+A    + +E +N+A +   +
Sbjct: 24  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 76
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      ++ EL++  +L + +R        N      SL+   + A 
Sbjct: 77  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H DL   N ++   +   +KI DFG +  + +T Y     + +
Sbjct: 137 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + SPE L    +    D+WS G +L E+ T
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 78  IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG    +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 185
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F D Y +   +G GS+ +  +        + A+K+I   K        E+++L +  +  
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIEILLRYGQ-- 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            H   I+ LK  +    H+ LV EL+     L  ++R   F   S          +   +
Sbjct: 80  -HPN-IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF---SEREASFVLHTIGKTV 134
Query: 226 AFLSSPELSIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
            +L S    ++H DLKP NIL    S     ++I DFG +  +      L     +  + 
Sbjct: 135 EYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQ--MTKI 325
           +PEVL    YD   D+WSLG +L  +  G  P  +G ++  +  +T+I
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 22/228 (9%)
Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD 167
           F D Y +   +G GS+ +  +        + A+K+I   K        E+++L +  +  
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIEILLRYGQ-- 79
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            H   I+ LK  +    H+ LV EL+     L  ++R   F   S          +   +
Sbjct: 80  -HPN-IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF---SEREASFVLHTIGKTV 134
Query: 226 AFLSSPELSIIHCDLKPENILLC--SPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
            +L S    ++H DLKP NIL    S     ++I DFG +  +      L     +  + 
Sbjct: 135 EYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQ--MTKI 325
           +PEVL    YD   D+WSLG +L  +  G  P  +G ++  +  +T+I
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 42/214 (19%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 18  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 71  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---- 277
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q   ++ + +    
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQD-KEFFKVKEPGE 178
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
              ++ +PE L    + +A D+WS G +L EL T
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K     +     E  L++ +     H + +V+L 
Sbjct: 21  LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ----HDK-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
              T +  + ++ E ++  +L + +++     V L     F+ Q+   +A++     + I
Sbjct: 75  AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK--NYI 132
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
           H DL+  N+L+   +    KI DFG +  +    Y   +       + +PE +    + +
Sbjct: 133 HRDLRAANVLVS--ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 293 AIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
             D+WS G +L E+ T G+  + G+   D MT + +   MP
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
           LGKG+FG V               VA+K +++  P   +  Q E+Q+L+ +     HS +
Sbjct: 18  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 72
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
           IVK +G  +   +  L LV E L S  L + ++    H   L+ ++   ++ Q+C  + +
Sbjct: 73  IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 129
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
           L S     +H DL   NIL+ S   + +KI DFG +  +      Y+     QS  ++ +
Sbjct: 130 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
           PE L    +    D+WS G +L EL T
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 78  IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG    +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFG----L 185
Query: 267 GQTLYQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            + +Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 19  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 72  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---- 277
           C  + +L +     IH +L   NIL+ +  R  +KI DFG +  + Q    Y        
Sbjct: 125 CKGMEYLGTKRY--IHRNLATRNILVENENR--VKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 278 --YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 2   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 54
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 55  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 114
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N  +   +   +KI DFG
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCXVA--EDFTVKIGDFG 170
Query: 262 SSCHVGQTLY-----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T Y     + +    + SPE L    +    D+WS G +L E+ T
Sbjct: 171 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
           LGKG+FG V               VA+K +++  P   +  Q E+Q+L+ +     HS +
Sbjct: 19  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 73
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
           IVK +G  +   +  L LV E L S  L + ++    H   L+ ++   ++ Q+C  + +
Sbjct: 74  IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 130
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
           L S     +H DL   NIL+ S   + +KI DFG +  +      Y+     QS  ++ +
Sbjct: 131 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
           PE L    +    D+WS G +L EL T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 359 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 415
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 473
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 474 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 529
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 530 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 588 KGERMGCPAG 597

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
           LGKG+FG V               VA+K +++  P   +  Q E+Q+L+ +     HS +
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 85
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
           IVK +G  +   +  L LV E L S  L + ++    H   L+ ++   ++ Q+C  + +
Sbjct: 86  IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 142
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI-----QSR-YYRS 281
           L S     +H DL   NIL+ S   + +KI DFG +  +      Y+     QS  ++ +
Sbjct: 143 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
           PE L    +    D+WS G +L EL T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQV-AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           LG+G++G VV+   H    Q+ A+K I+       Q ++   L   I+   +   + V  
Sbjct: 42  LGRGAYG-VVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDL--DISXRTVDCPFTVTF 98
Query: 177 KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALAFLSSPELS 234
            G    +  + +  EL   +L    +     G ++  ++  K A  +  AL  L S +LS
Sbjct: 99  YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-KLS 157
Query: 235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--RYYRSPE----VLLGI 288
           +IH D+KP N+L+ +     +K  DFG S ++   + + I +  + Y +PE     L   
Sbjct: 158 VIHRDVKPSNVLINA--LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQK 215
Query: 289 PYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIE 327
            Y +  D+WSLG   +EL     P  S      Q+ +++E
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGFVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
           DFG S  +         +R       + SPE +    +  A D+WS G +L E+ + GE 
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
            +   +  D +  + E   +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 16  IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 73  DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 186
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 187 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 245 KGERMGCPAG 254

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 16  IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 72
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 73  DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 130
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 131 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 186
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 187 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 245 KGERMGCPAG 254

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 358 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 414
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 472
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 473 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 528
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 529 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 587 KGERMGCPAG 596

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLL--EKINK 165
           +++ +   +G GSFG++    + +   +VAIK+  +K K P         QLL   KI +
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---------QLLYESKIYR 57
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                  I  ++      ++  LV +LL  +L +L  N     +SL      A Q+   +
Sbjct: 58  ILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLF-NFCSRKLSLKTVLMLADQMINRV 116
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR------ 277
            F+ S   S +H D+KP+N L+   +R+  + IIDFG +  +   + +Q+I  R      
Sbjct: 117 EFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
               Y S    LGI      D+ SLG +L+    G   + G
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGAVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
           DFG S  +         +R       + SPE +    +  A D+WS G +L E+ + GE 
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
            +   +  D +  + E   +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK IK    ++  F+ +A++ ++L         H + +
Sbjct: 35  IGSGQFGLVHLGY-WLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKL--------SHPK-L 84
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLVFE + +   +    T     +          +C  +A+L   E 
Sbjct: 85  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 142
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
            +IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 143 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 198
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFS 219

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 14  IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 70
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 71  DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 128
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 129 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 184
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 185 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 243 KGERMGCPAG 252

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y       R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 21  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 74  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 127 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +       N+A 
Sbjct: 9   YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAA 61
Query: 155 IEVQLLEKINKADIHSRY----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------- 202
              + +E +N+A +   +    +V+L G  +      ++ EL++  +L + +R       
Sbjct: 62  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 203 -NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
            N      SL+   + A ++   +A+L++ +   +H DL   N ++   +   +KI DFG
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFG 177
Query: 262 SSCHVGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +  + +T       +      + SPE L    +    D+WS G +L E+ T
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNK-KPFLNQA-QIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D         VA+K +K    P L    Q E+++L  +     +  
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-----YHE 70
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +IVK KG    +    +   +    L +L      H V L     FAQQ+C  +A+L + 
Sbjct: 71  HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
               IH  L   N+LL + +   +KI DFG +  V +  ++Y + R       ++ +PE 
Sbjct: 131 H--YIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 185
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           L    +  A D+WS G  L EL T    +   N+    TK  E++G   G
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELIGHTQG 230

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNK-KPFLNQA-QIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D         VA+K +K    P L    Q E+++L  +     +  
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-----YHE 71
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +IVK KG    +    +   +    L +L      H V L     FAQQ+C  +A+L + 
Sbjct: 72  HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
               IH  L   N+LL + +   +KI DFG +  V +  ++Y + R       ++ +PE 
Sbjct: 132 H--YIHRALAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           L    +  A D+WS G  L EL T    +   N+    TK  E++G   G
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT----YCDSNQSPH-TKFTELIGHTQG 231

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 25  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 78  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 131 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 23  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 76  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 129 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 78  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG +  +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFGLARDI 189
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +     +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 24  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 77  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 130 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 49  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 102 DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 155 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 104 ----DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 158
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
            + +LS  ++  +H DL   NIL+ S      K+ DFG S  +         +R      
Sbjct: 159 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +PP
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T Y     + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 18  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 71  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L         H + +
Sbjct: 18  IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 67
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLVFE + +   +    T     +          +C  +A+L   E 
Sbjct: 68  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 125
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
            +IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 126 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 181
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFS 202

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L         H + +
Sbjct: 15  IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 64
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLVFE + +   +    T     +          +C  +A+L   E 
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 122
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
            +IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 123 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 178
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 47  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 101
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 102 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 156
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
            + +LS  ++  +H DL   NIL+ S      K+ DFG S  +         +R      
Sbjct: 157 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +PP
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 269

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 17  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 70  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 123 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L         H + +
Sbjct: 13  IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 62
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLVFE + +   +    T     +          +C  +A+L   E 
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 120
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
            +IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 121 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 176
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFS 197

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 22  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 75  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 128 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 18  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 71  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 124 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
           E +  +GKG FG V K    ++K  VAIK +      L  ++ E +++EK  +       
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            ++++   IVKL G       + + F +   +LY+ + +   H +  ++  +    +   
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
           + ++ +    I+H DL+  NI L S   +A    K+ DFG+S     ++   + +  + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
           PE +      Y    D +S   IL  + TGE  F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LGKG+FG V         D+  +     K+  + +  L   + E+++L+ +   +I    
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI---- 91
Query: 173 IVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFL 228
            VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+C  + +L
Sbjct: 92  -VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSR-YYRSP 282
            +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S  ++ +P
Sbjct: 149 GTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHT 308
           E L    + +A D+WS G +L EL T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G  G V       +   VAIK ++  +       P   +  +
Sbjct: 44  KEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNL 213
           EV LL+K++        +++L   F   +   L+ E      +L++ I  T    +   L
Sbjct: 104 EVVLLKKVSSG---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEEL 158
Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-Q 272
            + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTD 215
Query: 273 YIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           +  +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 103
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 104 ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 158
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
            + +LS  ++  +H DL   NIL+ S      K+ DFG S  +         +R      
Sbjct: 159 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +PP
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 118 LGKGSFGQVVKAFDHEEKCQ-----------VAIKIIK-NKKPFLNQAQIEVQLLEKINK 165
           LGKG+FG V       E C+           VA+K ++ + +  L   + E+++L+ +  
Sbjct: 16  LGKGNFGSV-------EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 166 ADIHSRYIVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQL 221
            +I     VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+
Sbjct: 69  DNI-----VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQS 276
           C  + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S
Sbjct: 122 CKGMEYLGTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 277 R-YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++ +PE L    + +A D+WS G +L EL T
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
           DFG S  +         +R       + SPE +    +  A D+WS G +L E+ + GE 
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
            +   +  D +  + E   +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + ++I DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMRIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 87  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S     IH DL   NILL   +++ +KI DFG +  +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDI 198
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +     +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
           DFG S  +         +R       + SPE +    +  A D+WS G +L E+ + GE 
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
            +   +  D +  + E   +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LGKG+FG V         D+  +     K+  + +  L   + E+++L+ +   +I    
Sbjct: 36  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI---- 91
Query: 173 IVKLKG--HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFL 228
            VK KG  +   + +L L+ E L Y   +L      H   ++  K  ++  Q+C  + +L
Sbjct: 92  -VKYKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSR-YYRSP 282
            +     IH DL   NIL+ +  R  +KI DFG +  + Q      + +  +S  ++ +P
Sbjct: 149 GTKRY--IHRDLATRNILVENENR--VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 283 EVLLGIPYDLAIDMWSLGCILVELHT 308
           E L    + +A D+WS G +L EL T
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 141 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 252
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D         VA+K +K      +++  + E+ +L  +     +  
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-----YHE 93
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +I+K KG         L   +    L +L      H + L     FAQQ+C  +A+L + 
Sbjct: 94  HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSR----YYRSPEVL 285
               IH DL   N+LL + +   +KI DFG +  V  G   Y+  +      ++ +PE L
Sbjct: 154 H--YIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
               +  A D+WS G  L EL     L    +     TK +E++G+  G +
Sbjct: 210 KEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQGQM 255

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 41/266 (15%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSRY----------YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           DFG    + + L    ++ Y          + SPE +    +  A D+WS G +L E+ +
Sbjct: 190 DFG----LARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 309 -GEPLFSGKNEVDQMTKIIEVLGMPP 333
            GE  +   +  D +  + E   +PP
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPP 271

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 29/262 (11%)
Query: 72  QLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFD 131
           QL         +  + + + G+D    +   +   + L R      LG GS+G+V K   
Sbjct: 25  QLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSR------LGHGSYGEVFKVRS 78
Query: 132 HEEKCQVAIKIIKNKKPFLN-----QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL 186
            E+    A+K  ++  PF       +   EV   EK+ +        V+L+  +     L
Sbjct: 79  KEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPC----CVRLEQAWEEGGIL 132
Query: 187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA--QQLCCALAFLSSPELSIIHCDLKPEN 244
            L  EL   +L    ++    G SL   + +   +    ALA L S    ++H D+KP N
Sbjct: 133 YLQTELCGPSLQ---QHCEAWGASLPEAQVWGYLRDTLLALAHLHS--QGLVHLDVKPAN 187
Query: 245 ILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--YYRSPEVLLGIPYDLAIDMWSLGCI 302
           I L    R   K+ DFG    +G      +Q     Y +PE+L G  Y  A D++SLG  
Sbjct: 188 IFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLT 244
Query: 303 LVELHTGEPLFSGKNEVDQMTK 324
           ++E+     L  G     Q+ +
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQ 266

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR  +   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 28  DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL----NLTKK 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V      +L K 
Sbjct: 88  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 217 F--AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
           F   + L C        + FL+S     IH DL   NILL   +++ +KI DFG +  + 
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDIX 199
Query: 268 Q--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           +     +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR  +   LG+G+FGQV++  AF  ++      VA+K++K          +  E+++L  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL-NLTKKF-- 217
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +L K F  
Sbjct: 87  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 218 -------AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
                  + Q+   + FL+S +   IH DL   NILL   +++ +KI DFG    + + +
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKIXDFG----LARDI 194
Query: 271 YQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 91  DGHDDENYDYIIKHGEKFLD--RYEIDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK- 144
           D H  E+    +    K LD     ID ++G G FG+V         +++  VAIK +K 
Sbjct: 24  DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV 83
Query: 145 -----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLY 198
                 ++ FL +A I  Q              I++L+G  T    + +V E + + +L 
Sbjct: 84  GYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
           + +R  +     + L     + +   + +LS  ++  +H DL   NIL+ S      K+ 
Sbjct: 135 SFLRKHDAQFTVIQLVGML-RGIASGMKYLS--DMGYVHRDLAARNILINS--NLVCKVS 189
Query: 259 DFGSSCHVGQTLYQYIQSR------YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEP 311
           DFG S  +         +R       + SPE +    +  A D+WS G +L E+ + GE 
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 312 LFSGKNEVDQMTKIIEVLGMPP 333
            +   +  D +  + E   +PP
Sbjct: 250 PYWEMSNQDVIKAVDEGYRLPP 271

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 78  IG----HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S +   IH DL   NILL   +++ +KI DFG +  +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS--EKNVVKICDFGLARDI 189
Query: 267 GQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
            +     +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VAIK +       N+A    + +E +N+A +   +
Sbjct: 18  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRERIEFLNEASVMKEF 70
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      ++ EL++  +L + +R        N      SL+   + A 
Sbjct: 71  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
           ++   +A+L++ +   +H DL   N ++   +   +KI DFG +  + +T       +  
Sbjct: 131 EIADGMAYLNANKF--VHRDLAARNCMVA--EDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + SPE L    +    D+WS G +L E+ T
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG VVK      +  VAIK+IK    ++  F+ +A++ + L         H + +
Sbjct: 32  LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL--------SHEK-L 81
Query: 174 VKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V+L G  T +  + ++ E ++   L N +R    H        +  + +C A+ +L S +
Sbjct: 82  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSRY---YRSPEVLLGI 288
              +H DL   N L+    +  +K+ DFG S +V        + S++   +  PEVL+  
Sbjct: 141 F--LHRDLAARNCLV--NDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 289 PYDLAIDMWSLGCILVELHT 308
            +    D+W+ G ++ E+++
Sbjct: 197 KFSSKSDIWAFGVLMWEIYS 216

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 28/250 (11%)
Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIE 156
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++
Sbjct: 6   IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALK 62
Query: 157 VQLLEKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
            +LL + N    + + YIV++ G    ++ + LV E+      N     N H    N+  
Sbjct: 63  DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII- 120
Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVG 267
           +   Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  
Sbjct: 121 ELVHQVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKA 176
Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTK 324
           QT  ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +
Sbjct: 177 QTHGKWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Query: 325 IIEVLGMPPG 334
             E +G P G
Sbjct: 235 KGERMGCPAG 244

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D         VA+K +K      +++  + E+ +L  +     +  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-----YHE 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +I+K KG    +    L   +    L +L      H + L     FAQQ+C  +A+L S 
Sbjct: 77  HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
               IH +L   N+LL + +   +KI DFG +  V +  ++Y + R       ++ +PE 
Sbjct: 137 H--YIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 191
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           L    +  A D+WS G  L EL     L    +     TK +E++G+  G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQG 236

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 27  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 87  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 198
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +I+ ++G G FG+V    +KA   +E C VAIK +K           E Q  E +++A I
Sbjct: 19  KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKG-------GYTERQRREFLSEASI 70
Query: 169 HSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             ++    I++L+G  T    + ++ E +     +     N    ++       + +   
Sbjct: 71  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ---------TLYQYIQ 275
           + +L+  E+S +H DL   NIL+ S      K+ DFG S  + +         +L   I 
Sbjct: 131 MRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            R+  +PE +    +  A D WS G ++ E+ + GE  +   +  D +  I +   +PP
Sbjct: 187 IRWT-APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP 244

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 24  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 76
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 77  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T Y     + +
Sbjct: 137 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 24  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 84  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 195
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 36/273 (13%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
           ++Y +   +G GSFG +    +     +VAIK+  +K K P   Q  IE +   K+ +  
Sbjct: 9   NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP---QLHIESKFY-KMMQGG 64
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           +    I  +K      ++  +V ELL  +L +L  N      SL      A Q+   + +
Sbjct: 65  VG---IPSIKWCGAEGDYNVMVMELLGPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEY 120
Query: 228 LSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG-SSCHVGQTLYQYIQSR-------- 277
           + S   + IH D+KP+N L+   K+   + IIDFG +  +     +Q+I  R        
Sbjct: 121 IHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 278 -YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-----------QMTKI 325
             Y S    LGI      D+ SLG +L+  + G   + G                +M+  
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238
Query: 326 IEVL--GMPPGYLLHGASKTSKYFDRLSDNSYV 356
           IEVL  G P  +  +     S  FD   D SY+
Sbjct: 239 IEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYL 271

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 20  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 75  ----DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----- 278
            + +LS  ++  +H DL   NIL+ S      K+ DFG S    + L    ++ Y     
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLS----RVLEDDPEAAYTTRGG 181
Query: 279 -----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
                + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 241
Query: 333 P 333
           P
Sbjct: 242 P 242

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 118 LGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQA-QIEVQLLEKINKADIHSRY 172
           LGKG+FG V               VA+K +++  P   +  Q E+Q+L+ +     HS +
Sbjct: 15  LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDF 69
Query: 173 IVKLKG--HFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAF 227
           IVK +G  +   +  L LV E L S  L + ++    H   L+ ++   ++ Q+C  + +
Sbjct: 70  IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEY 126
Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-----GQTLYQYIQSR-YYRS 281
           L S     +H DL   NIL+ S   + +KI DFG +  +        + +  QS  ++ +
Sbjct: 127 LGS--RRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHT 308
           PE L    +    D+WS G +L EL T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 37  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 91
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 92  ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 146
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----- 278
            + +LS  ++  +H DL   NIL+ S      K+ DFG S    + L    ++ Y     
Sbjct: 147 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLS----RVLEDDPEAAYTTRGG 198
Query: 279 -----YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
                + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +P
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 258
Query: 333 P 333
           P
Sbjct: 259 P 259

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/239 (19%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIK-----IIKNKKPFLNQAQIE 156
           +K  +K+++ Y I   L +G F +++     ++    A+K     +++ K+ F      +
Sbjct: 23  VKEKDKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 157 VQLLEKINK--------ADIHSRYIVKLKGHFTWKNHLCLVFE------LLSYNLYNLIR 202
           + +  K +          DI + Y +  +G  T  + + +++E      +L ++ Y  + 
Sbjct: 81  ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 203 NTNFHG-VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
           + N+   + + + K   + +  + +++ + E +I H D+KP NIL+   K   +K+ DFG
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILM--DKNGRVKLSDFG 197
Query: 262 SSCHV-------GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLG-CILVELHTGEPL 312
            S ++        +  Y+++   ++ +     G      +D+WSLG C+ V  +   P 
Sbjct: 198 ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG----AKVDIWSLGICLYVMFYNVVPF 252

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +I+ ++G G FG+V    +KA   +E C VAIK +K           E Q  E +++A I
Sbjct: 17  KIEEVIGAGEFGEVCRGRLKAPGKKESC-VAIKTLKG-------GYTERQRREFLSEASI 68
Query: 169 HSRY----IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             ++    I++L+G  T    + ++ E +     +     N    ++       + +   
Sbjct: 69  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ---------TLYQYIQ 275
           + +L+  E+S +H DL   NIL+ S      K+ DFG S  + +         +L   I 
Sbjct: 129 MRYLA--EMSYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            R + +PE +    +  A D WS G ++ E+ + GE  +   +  D +  I +   +PP
Sbjct: 185 IR-WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP 242

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 22  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 82  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVT--ENNVMKIADFGLARD 193
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 114 IDTLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKIN 164
           ID ++G G FG+V         +++  VAIK +K       ++ FL +A I  Q      
Sbjct: 20  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF----- 74
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L+G  T    + +V E + + +L + +R  +     + L     + +  
Sbjct: 75  ----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
            + +LS  ++  +H DL   NIL+ S      K+ DFG S  +         +R      
Sbjct: 130 GMKYLS--DMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            + SPE +    +  A D+WS G +L E+ + GE  +   +  D +  + E   +PP
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEKCQ-VAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++A     D    C+ VA+K++K          +  E+++L  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK---- 216
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +  +    
Sbjct: 87  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 217 ----------FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
                     ++ Q+   + FL+S     IH DL   NILL   +++ +KI DFG +  +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLS--EKNVVKICDFGLARDI 198
Query: 267 --GQTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                  +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 54/246 (21%)
Query: 118 LGKGSFGQVVKAFDH-----EEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
           LG+G+FG+V  A  +     ++K  VA+K +K+     +K F    Q E +LL      +
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF----QREAELL-----TN 73
Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-----------------VS 210
           +   +IVK  G     + L +VFE + +   +L +    HG                 + 
Sbjct: 74  LQHEHIVKFYGVCGDGDPLIMVFEYMKHG--DLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
           L+     A Q+   + +L+S     +H DL   N L+ +     +KI DFG S  V  T 
Sbjct: 132 LSQMLHIASQIASGMVYLASQHF--VHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTD 187
Query: 271 YQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEPLFSGKNEVDQMT 323
           Y  +         +  PE ++   +    D+WS G IL E+ T   +P F   N     T
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----T 242
Query: 324 KIIEVL 329
           ++IE +
Sbjct: 243 EVIECI 248

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR  +   LG+G+FGQV++  AF  ++      VA+K++K          +  E+++L  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL-NLTKKF-- 217
           I     H   +V L G  T     L ++ E   + NL   +R+     V   +L K F  
Sbjct: 87  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 218 AQQLCC-------ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
            + L C        + FL+S +   IH DL   NILL   +++ +KI DFG    + + +
Sbjct: 143 LEHLICYSFQVAKGMEFLASRK--XIHRDLAARNILLS--EKNVVKICDFG----LARDI 194
Query: 271 YQ---YIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           Y+   Y++    R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T Y     + +
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +D  EI+ L+G G FGQV KA   + +      +IK  K    +A+ EV+ L K++  +I
Sbjct: 11  MDFKEIE-LIGSGGFGQVFKA---KHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNI 66
Query: 169 --------HSRYIVKLKGHFTWKNHLCLVFELLSY----NLYNLIRNTNFHGVSLNLTKK 216
                      Y  +     + ++    +F  + +     L   I       +   L  +
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYI 274
             +Q+   + ++ S +L  I+ DLKP NI L   K+  +KI DFG  +S        +  
Sbjct: 127 LFEQITKGVDYIHSKKL--INRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRXRSK 182
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
            +  Y SPE +    Y   +D+++LG IL EL
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 271 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 325
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 326 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 380 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTT 459

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 106 EKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLL 160
           E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++ +LL
Sbjct: 4   EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 161 EKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N    + + YIV++ G    ++ + LV E+      N     N H    N+  +   
Sbjct: 61  AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVH 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLY 271
           Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  QT  
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEV 328
           ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +  E 
Sbjct: 175 KWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 329 LGMPPG 334
           +G P G
Sbjct: 233 MGCPAG 238

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 44/263 (16%)
Query: 78  TRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHE---- 133
           T S+  E  YV     D   Y+Y +K  E   +  E   +LG G+FG+V+ A  +     
Sbjct: 19  TGSSDNEYFYV-----DFREYEYDLKW-EFPRENLEFGKVLGSGAFGKVMNATAYGISKT 72
Query: 134 -EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
               QVA+K++K K    ++ +  +  L+ + +   H   IV L G  T    + L+FE 
Sbjct: 73  GVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHEN-IVNLLGACTLSGPIYLIFEY 130
Query: 193 LSY-NLYNLIRN---------------------TNFHGVSLNLTKKFAQQLCCALAFLSS 230
             Y +L N +R+                      + + ++      FA Q+   + FL  
Sbjct: 131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVL 285
              S +H DL   N+L+   K   +KI DFG +  +       ++        + +PE L
Sbjct: 191 K--SCVHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 246
Query: 286 LGIPYDLAIDMWSLGCILVELHT 308
               Y +  D+WS G +L E+ +
Sbjct: 247 FEGIYTIKSDVWSYGILLWEIFS 269

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V  A  + +  +VA+K +K          +E  L E      +    +VKL 
Sbjct: 196 LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
              T K  + ++ E ++  +L + +++       L     F+ Q+   +AF+   + + I
Sbjct: 250 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 306
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
           H DL+  NIL+ +      KI DFG +  +    Y   +       + +PE +    + +
Sbjct: 307 HRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 293 AIDMWSLGCILVELHT 308
             D+WS G +L+E+ T
Sbjct: 365 KSDVWSFGILLMEIVT 380

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V  A  + +  +VA+K +K          +E  L E      +    +VKL 
Sbjct: 190 LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
              T K  + ++ E ++  +L + +++       L     F+ Q+   +AF+   + + I
Sbjct: 244 AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 300
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDM 296
           H DL+  NIL+ +      KI DFG +  VG           + +PE +    + +  D+
Sbjct: 301 HRDLRAANILVSA--SLVCKIADFGLA-RVGAKF-----PIKWTAPEAINFGSFTIKSDV 352
Query: 297 WSLGCILVELHT 308
           WS G +L+E+ T
Sbjct: 353 WSFGILLMEIVT 364

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           +R      LG G+FG+VV+A  +     +    VA+K++K     L + +  +  L+ ++
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 104
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-------- 215
               H   IV L G  T      ++ E   Y +L N +R      +    +         
Sbjct: 105 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 216 --------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
                    F+ Q+   +AFL+S   + IH DL   NILL   + +  KI DFG + H+ 
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARHIK 219
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 ++        + +PE +    Y    D+WS G  L EL +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +D  EI+ L+G G FGQV KA   + +      +I+  K    +A+ EV+ L K++  +I
Sbjct: 12  MDFKEIE-LIGSGGFGQVFKA---KHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNI 67
Query: 169 ----------------------HSRYIVKLKGHFTWKNHLCLVFELL---SYNLYNLIRN 203
                                  S Y  +   + +     CL  ++       L   I  
Sbjct: 68  VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-- 261
                +   L  +  +Q+   + ++ S +L  IH DLKP NI L   K+  +KI DFG  
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKL--IHRDLKPSNIFLVDTKQ--VKIGDFGLV 183
Query: 262 SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
           +S        +   +  Y SPE +    Y   +D+++LG IL EL
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 28/246 (11%)
Query: 106 EKFLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLL 160
           E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++ +LL
Sbjct: 4   EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELL 60
Query: 161 EKIN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
            + N    + + YIV++ G    ++ + LV E+      N     N H    N+  +   
Sbjct: 61  AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVH 118
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLY 271
           Q+   + +L   E + +H DL   N+LL +  +   KI DFG S         +  QT  
Sbjct: 119 QVSMGMKYLE--ESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEV 328
           ++    Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +  E 
Sbjct: 175 KWPVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 329 LGMPPG 334
           +G P G
Sbjct: 233 MGCPAG 238

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 88  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 46/230 (20%)
Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF------------------- 149
           L++Y +   +GKGS+G V  A++  +    A+K++  KK                     
Sbjct: 12  LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 150 --------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN--HLCLVFELLSYNLYN 199
                   + Q   E+ +L+K++  ++     VKL       N  HL +VFEL+  N   
Sbjct: 72  GCIQPRGPIEQVYQEIAILKKLDHPNV-----VKLVEVLDDPNEDHLYMVFELV--NQGP 124
Query: 200 LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
           ++       +S +  + + Q L   + +L   +  IIH D+KP N+L+   +   IKI D
Sbjct: 125 VMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVG--EDGHIKIAD 180
Query: 260 FGSSCHVGQT---LYQYIQSRYYRSPEVL---LGIPYDLAIDMWSLGCIL 303
           FG S     +   L   + +  + +PE L     I    A+D+W++G  L
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +       +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 129 KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 240
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 17  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 77  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 188
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 88  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 31  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 84
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 85  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 142
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 143 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 201 SDVWSFGILLTEIVT 215

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 54/258 (20%)
Query: 112 YEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIK-IIKNKKPFLNQAQIEVQLLEKINK 165
           ++I+  +G+G+F  V  A        EEK  +A+K +I    P    A  E+Q L     
Sbjct: 23  FKIEDKIGEGTFSSVYLATAQLQVGPEEK--IALKHLIPTSHPIRIAA--ELQCLTVAGG 78
Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
            D     ++ +K  F   +H+ +    L +  +  I N+    +S    +++   L  AL
Sbjct: 79  QD----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKAL 130
Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------------------------ 261
             +   +  I+H D+KP N L  + +     ++DFG                        
Sbjct: 131 KRIH--QFGIVHRDVKPSNFLY-NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 262 ---SSCHVGQTLYQYIQSRY----YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGE-PL 312
              + C +  +  Q +  R     +R+PEVL   P    AIDMWS G I + L +G  P 
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 313 FSGKNEVDQMTKIIEVLG 330
           +   +++  + +I+ + G
Sbjct: 248 YKASDDLTALAQIMTIRG 265

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 20  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 80  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 191
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++ E  S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQ--TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +       +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++    S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 117 LLGKGSFGQVVKAFDHEEKCQVAI--KIIK----NKKPFLNQAQIEVQLLEKINKADIHS 170
           +LGKG FGQ +K   H E  +V +  ++I+     ++ FL + ++ ++ LE  N      
Sbjct: 17  VLGKGCFGQAIKV-THRETGEVMVMKELIRFDEETQRTFLKEVKV-MRCLEHPN------ 68
Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
             ++K  G       L  + E +       I  +       +    FA+ +   +A+L S
Sbjct: 69  --VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFG-SSCHVGQTL----------------YQY 273
             ++IIH DL   N L+   K   + + DFG +   V +                  Y  
Sbjct: 127 --MNIIHRDLNSHNCLVRENKN--VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
           + + Y+ +PE++ G  YD  +D++S G +L E+
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 21  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 81  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 192
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 16  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 69
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 70  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 127
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 128 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 186 SDVWSFGILLTEIVT 200

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 118 LGKGSFGQV-VKAFDHEEKC---QVAIKIIKNKKPFLNQA--QIEVQLLEKINKADIHSR 171
           LG+G FG+V +  +D         VA+K +K      +++  + E+ +L  +     +  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTL-----YHE 76
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           +I+K KG    +    L   +    L +L      H + L     FAQQ+C  +A+L + 
Sbjct: 77  HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-------YYRSPEV 284
               IH +L   N+LL + +   +KI DFG +  V +  ++Y + R       ++ +PE 
Sbjct: 137 H--YIHRNLAARNVLLDNDR--LVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWYAPEC 191
Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           L    +  A D+WS G  L EL     L    +     TK +E++G+  G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYEL-----LTHCDSSQSPPTKFLELIGIAQG 236

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 26  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 79
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 80  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 137
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 138 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 196 SDVWSFGILLTEIVT 210

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V  A  + +  +VA+K +K          +E  L E      +    +VKL 
Sbjct: 23  LGAGQFGEVWMA-TYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII 236
              T K  + ++ E ++  +L + +++       L     F+ Q+   +AF+   + + I
Sbjct: 77  AVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRNYI 133
Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDL 292
           H DL+  NIL+ +      KI DFG +  +    Y   +       + +PE +    + +
Sbjct: 134 HRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 293 AIDMWSLGCILVELHT 308
             D+WS G +L+E+ T
Sbjct: 192 KSDVWSFGILLMEIVT 207

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 27  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 80
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 81  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 138
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 139 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 197 SDVWSFGILLTEIVT 211

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV--SLNLTKKF 217
           + I K     + I+ L G  T    L ++ E  S  NL   ++     G+  S N +   
Sbjct: 88  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 218 AQQLC------CA------LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-- 263
            +QL       CA      + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLARD 199
Query: 264 CHVGQTLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
            H      +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 21  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHE---EKCQVAIKIIKN--KKPFLNQAQIEVQLL 160
           D+  +   LG+G+FGQVV A     D +   E   VA+K++K+   +  L+    E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN------- 212
           + I K     + I+ L G  T    L ++    S  NL   +R     G+  +       
Sbjct: 95  KMIGK----HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 213 ---LTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +T K       QL   + +L+S +   IH DL   N+L+   + + +KI DFG +  
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVT--ENNVMKIADFGLARD 206
Query: 266 VGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
           +    Y  +    R    + +PE L    Y    D+WS G ++ E+ T  G P
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 243 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
           E +  +GKG FG V K    ++K  VAIK +      L  ++ E +++EK  +       
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            ++++   IVKL G       + + F +   +LY+ + +   H +  ++  +    +   
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
           + ++ +    I+H DL+  NI L S   +A    K+ DFG S     ++   + +  + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
           PE +      Y    D +S   IL  + TGE  F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 243 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 188 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 242
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 243 QLYAV------VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 297 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 41/234 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN----------------LYNLIRNT 204
           + I K     + I+ L G  T    L ++ E  S                   YN   N 
Sbjct: 88  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
                S +L    A Q+   + +L+S +   IH DL   N+L+   + + +KI DFG + 
Sbjct: 144 EEQLSSKDLVS-CAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 198
Query: 265 HVGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
            +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++KI    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKIRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 28/244 (11%)
Query: 108 FLDRYEI---DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           +LDR  +   D  LG G+FG V K +    +    VA+KI+KN+    N   ++ +LL +
Sbjct: 2   YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAE 58
Query: 163 IN-KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
            N    + + YIV++ G    ++ + LV E+      N     N H    N+  +   Q+
Sbjct: 59  ANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQV 116
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLYQY 273
              + +L   E + +H DL   N+LL +   +  KI DFG S         +  QT  ++
Sbjct: 117 SMGMKYLE--ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKW 172
Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLG 330
               Y  +PE +    +    D+WS G ++ E  + G+  + G   +EV  M +  E +G
Sbjct: 173 PVKWY--APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230
Query: 331 MPPG 334
            P G
Sbjct: 231 CPAG 234

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 41/234 (17%)
Query: 110 DRYEIDTLLGKGSFGQVVKA----FDHEEK---CQVAIKIIKNKKPFLNQAQI--EVQLL 160
           DR  +   LG+G+FGQVV A     D ++     +VA+K++K+     + + +  E++++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN----------------LYNLIRNT 204
           + I K     + I+ L G  T    L ++ E  S                   YN   N 
Sbjct: 73  KMIGK----HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 205 NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC 264
                S +L    A Q+   + +L+S +   IH DL   N+L+   + + +KI DFG + 
Sbjct: 129 EEQLSSKDLVS-CAYQVARGMEYLASKK--CIHRDLAARNVLVT--EDNVMKIADFGLAR 183
Query: 265 HVGQTLY--QYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT--GEP 311
            +    Y  +    R    + +PE L    Y    D+WS G +L E+ T  G P
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 115 DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KADIHSR 171
           D  LG G+FG V K +    +    VA+KI+KN+    N   ++ +LL + N    + + 
Sbjct: 10  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNP 66
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
           YIV++ G    ++ + LV E+      N     N H    N+  +   Q+   + +L   
Sbjct: 67  YIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGMKYLE-- 122
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--------CHVGQTLYQYIQSRYYRSPE 283
           E + +H DL   N+LL +   +  KI DFG S         +  QT  ++    Y  +PE
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY--APE 178
Query: 284 VLLGIPYDLAIDMWSLGCILVELHT-GEPLFSG--KNEVDQMTKIIEVLGMPPG 334
            +    +    D+WS G ++ E  + G+  + G   +EV  M +  E +G P G
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 110 DRYEIDTLLGKGSFGQVVK--AFDHEEKC---QVAIKIIKNKKPFLNQAQI--EVQLLEK 162
           DR ++   LG+G+FGQV++  AF  ++      VA+K++K          +  E+++L  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 163 INKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLIRNTNFHGVSL---NLTKKF 217
           I     H   +V L G  T     L ++ E   + NL   +R+     V     +L K F
Sbjct: 89  IG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 218 ---------AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
                    + Q+   + FL+S     IH DL   NILL   +++ +KI DFG +  + +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLAS--RKXIHRDLAARNILLS--EKNVVKICDFGLARDIXK 200
Query: 269 --TLYQYIQSRY---YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                +   +R    + +PE +    Y +  D+WS G +L E+ +
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 15  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 69
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 70  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 124 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 179
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTT 203

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T       +  
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T       +  
Sbjct: 138 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKP--FLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K  N  P  FL +AQ+    ++K+    + 
Sbjct: 189 LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGNMSPEAFLQEAQV----MKKLRHEKLV 243
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 244 QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG    +    Y   Q       + +PE 
Sbjct: 298 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA 353
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTT 377

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 22  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 74
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 75  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-- 277
           ++   +A+L++ +   +H DL   N ++       +KI DFG +  + +T       +  
Sbjct: 135 EIADGMAYLNAKKF--VHRDLAARNCMVA--HDFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 278 ---YYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 26  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 78
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 79  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H +L   N ++       +KI DFG +  + +T Y     + +
Sbjct: 139 EIADGMAYLNAKKF--VHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY 172
           LG+GSFG V +         E + +VA+K +       N++    + +E +N+A +   +
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLNEASVMKGF 77
Query: 173 ----IVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKKFAQ 219
               +V+L G  +      +V EL+++ +L + +R        N      +L    + A 
Sbjct: 78  TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-----QYI 274
           ++   +A+L++ +   +H +L   N ++       +KI DFG +  + +T Y     + +
Sbjct: 138 EIADGMAYLNAKKF--VHRNLAARNCMVA--HDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
               + +PE L    +  + DMWS G +L E+ +
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 41/220 (18%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
           LG G+FG+VV+A        +   +VA+K++K+      K+  +++ +I   L +  N  
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------NTNFHGVSLNLTKK- 216
                 IV L G  T    + ++ E   Y +L N +R        +  F   +  L+ + 
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 217 ---FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
              F+ Q+   +AFL+S   + IH D+   N+LL +   +  KI DFG +  +       
Sbjct: 166 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYI 221
Query: 274 IQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           ++        + +PE +    Y +  D+WS G +L E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S   L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
           LG G+FG+VV+A        +   +VA+K++K+      K+  +++ +I   L +  N  
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT------NFHGVSLNLTK--KF 217
                 IV L G  T    + ++ E   Y +L N +R           G  L L     F
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           + Q+   +AFL+S   + IH D+   N+LL +   +  KI DFG +  +       ++  
Sbjct: 166 SSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGN 221
Query: 278 Y-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 + +PE +    Y +  D+WS G +L E+ +
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L         H + +
Sbjct: 16  IGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--------SHPK-L 65
Query: 174 VKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL 233
           V+L G    +  +CLV E + +   +    T     +          +C  +A+L   E 
Sbjct: 66  VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--EA 123
Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------YYRSPEVLLG 287
            +IH DL   N L+   +   IK+ DFG +  V     QY  S        + SPEV   
Sbjct: 124 CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSF 179
Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G ++ E+ +
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFS 200

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 43/222 (19%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
           LG G+FG+VV+A        +   +VA+K++K+      K+  +++ +I   L +  N  
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK--------- 216
                 IV L G  T    + ++ E   Y +L N +R     G+  +             
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 217 -----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY 271
                F+ Q+   +AFL+S   + IH D+   N+LL +      KI DFG +  +     
Sbjct: 166 RDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMNDSN 221
Query: 272 QYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
             ++        + +PE +    Y +  D+WS G +L E+ +
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 13  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 67
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 68  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 122 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 177
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTT 201

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 11  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 65
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 66  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 120 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 175
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTT 199

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 38/142 (26%)
Query: 207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----- 261
           HGV L++  + A+    A+ FL S  L  +H DLKP NI         +K+ DFG     
Sbjct: 163 HGVCLHIFIQIAE----AVEFLHSKGL--MHRDLKPSNIFFT--MDDVVKVGDFGLVTAM 214
Query: 262 ---------------SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL 306
                           + H GQ     + ++ Y SPE + G  Y   +D++SLG IL EL
Sbjct: 215 DQDEEEQTVLTPMPAYATHXGQ-----VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
Query: 307 HTGEPLFSGKNEVDQMTKIIEV 328
                L+S   +++++  I +V
Sbjct: 270 -----LYSFSTQMERVRIITDV 286

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 17  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 70
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 71  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 128
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            +L+  NIL+      + KI DFG +  +    Y   +       + +PE +    + + 
Sbjct: 129 RNLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 187 SDVWSFGILLTEIVT 201

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYI 173
           LG G FG+V          +VAIK +K    + + FL +AQI    ++K+    +   Y 
Sbjct: 17  LGNGQFGEVWMG-TWNGNTKVAIKTLKPGTMSPESFLEEAQI----MKKLKHDKLVQLYA 71
Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           V        +  + +V E ++  +L + +++     + L      A Q+   +A++    
Sbjct: 72  V------VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE--R 123
Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGI 288
           ++ IH DL+  NIL+ +      KI DFG +  +        Q       + +PE  L  
Sbjct: 124 MNYIHRDLRSANILVGN--GLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 289 PYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
            + +  D+WS G +L EL T G   + G N  + + ++     MP
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 226

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 67/319 (21%)
Query: 117 LLGKGSFGQVV--KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIV 174
           +LG G+ G +V    FD+ +   VA+K I  +    + A  EVQLL + ++     RY  
Sbjct: 31  VLGHGAEGTIVYRGMFDNRD---VAVKRILPE--CFSFADREVQLLRESDEHPNVIRYFC 85
Query: 175 KLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELS 234
             K     +    +  EL +  L   +   +F  + L       QQ    LA L S  L+
Sbjct: 86  TEKD----RQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQQTTSGLAHLHS--LN 138
Query: 235 IIHCDLKPENILLCSP-KRSAIK--IIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
           I+H DLKP NIL+  P     IK  I DFG    +    + +  SR    P    G    
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF--SRRSGVP----GTEGW 192
Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
           +A +M S  C              +N               P Y +   S    ++  +S
Sbjct: 193 IAPEMLSEDC-------------KEN---------------PTYTVDIFSAGCVFYYVIS 224
Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDXXXXXXXXXXXXXHSLADYMKFKDLILRML 411
           + S+   KS   +   L G+  LD +                     D +  ++LI +M+
Sbjct: 225 EGSHPFGKSLQRQANILLGACSLDCL---------------HPEKHEDVIA-RELIEKMI 268
Query: 412 TYDPKKRISPTNVLRHEFF 430
             DP+KR S  +VL+H FF
Sbjct: 269 AMDPQKRPSAKHVLKHPFF 287

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
           LG G+FG+VV+A        +   +VA+K++K+      K+  +++ +I   L +  N  
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 103
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT------NFHGVSLNLTK--KF 217
                 IV L G  T    + ++ E   Y +L N +R           G  L L     F
Sbjct: 104 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           + Q+   +AFL+S   + IH D+   N+LL +   +  KI DFG +  +       ++  
Sbjct: 158 SSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYIVKGN 213
Query: 278 Y-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 + +PE +    Y +  D+WS G +L E+ +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S   L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL   NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 131 E--RMNYVHRDLAAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 118 LGKGSFGQVVKAF-----DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKA 166
           LG G+FG+VV+A        +   +VA+K++K+      K+  +++ +I   L +  N  
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN-- 111
Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR------NTNFHGVSLNLTKK--- 216
                 IV L G  T    + ++ E   Y +L N +R       T+      N T     
Sbjct: 112 ------IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 217 ---FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
              F+ Q+   +AFL+S   + IH D+   N+LL +   +  KI DFG +  +       
Sbjct: 166 LLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVA--KIGDFGLARDIMNDSNYI 221
Query: 274 IQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
           ++        + +PE +    Y +  D+WS G +L E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           +R      LG G+FG+VV+A  +     +    VA+K++K     L + +  +  L+ ++
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 81
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
               H   IV L G  T      ++ E   Y +L N +R      +    +         
Sbjct: 82  YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
                    F+ Q+   +AFL+S   + IH DL   NILL   + +  KI DFG +  + 
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 196
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 ++        + +PE +    Y    D+WS G  L EL +
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           +R      LG G+FG+VV+A  +     +    VA+K++K     L + +  +  L+ ++
Sbjct: 39  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 97
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
               H   IV L G  T      ++ E   Y +L N +R      +    +         
Sbjct: 98  YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
                    F+ Q+   +AFL+S   + IH DL   NILL   + +  KI DFG +  + 
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 212
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 ++        + +PE +    Y    D+WS G  L EL +
Sbjct: 213 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           +R      LG G+FG+VV+A  +     +    VA+K++K     L + +  +  L+ ++
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 104
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-------- 215
               H   IV L G  T      ++ E   Y +L N +R      +    +         
Sbjct: 105 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 216 --------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
                    F+ Q+   +AFL+S   + IH DL   NILL   + +  KI DFG +  + 
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 219
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 ++        + +PE +    Y    D+WS G  L EL +
Sbjct: 220 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 27  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 80
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 81  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 138
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 139 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 197 SDVWSFGILLTEIVT 211

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK------- 165
           E +  +GKG FG V K    ++K  VAIK +      L  ++ E +++EK  +       
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL-----ILGDSEGETEMIEKFQEFQREVFI 76
Query: 166 -ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            ++++   IVKL G       + + F +   +LY+ + +   H +  ++  +    +   
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEF-VPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALG 134
Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQTLYQYIQSRYYRS 281
           + ++ +    I+H DL+  NI L S   +A    K+ DF  S     ++   + +  + +
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 282 PEVLLG--IPYDLAIDMWSLGCILVELHTGEPLF 313
           PE +      Y    D +S   IL  + TGE  F
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 21  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 29  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 82
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 83  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 140
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 141 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 199 SDVWSFGILLTEIVT 213

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           +R      LG G+FG+VV+A  +     +    VA+K++K     L + +  +  L+ ++
Sbjct: 41  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 99
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT--------- 214
               H   IV L G  T      ++ E   Y +L N +R      +    +         
Sbjct: 100 YLGNHMN-IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 215 -------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
                    F+ Q+   +AFL+S   + IH DL   NILL   + +  KI DFG +  + 
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRIT--KICDFGLARDIK 214
Query: 268 QTLYQYIQSRY-----YRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                 ++        + +PE +    Y    D+WS G  L EL +
Sbjct: 215 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 23  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 76
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 77  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 134
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 135 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 193 SDVWSFGILLTEIVT 207

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 21  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 74
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 75  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 132
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 133 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 30  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 83
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 84  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 141
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 142 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 200 SDVWSFGILLTEIVT 214

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK 177
           LG G FG+V   + +    +VA+K +K      +    E  L++++     H R +V+L 
Sbjct: 22  LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ----HQR-LVRLY 75
Query: 178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
              T +    +   + + +L + ++  +   +++N     A Q+   +AF+   E + IH
Sbjct: 76  AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERNYIH 133
Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEVLLGIPYDLA 293
            DL+  NIL+      + KI DFG +  +        +       + +PE +    + + 
Sbjct: 134 RDLRAANILVSD--TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 294 IDMWSLGCILVELHT 308
            D+WS G +L E+ T
Sbjct: 192 SDVWSFGILLTEIVT 206

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------FLNQAQIEVQLLEKINKADIHSR 171
           +G+G+FG+V       +   VA+K  +   P      FL +A+I    L++ +  +    
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI----LKQYSHPN---- 173
Query: 172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP 231
            IV+L G  T K  + +V EL+    +     T    + +    +        + +L S 
Sbjct: 174 -IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY-----YRSPEVLL 286
               IH DL   N L+   +++ +KI DFG S      +Y            + +PE L 
Sbjct: 233 --CCIHRDLAARNCLVT--EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 287 GIPYDLAIDMWSLGCILVE 305
              Y    D+WS G +L E
Sbjct: 289 YGRYSSESDVWSFGILLWE 307

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 49/233 (21%)
Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           G+    +YE+   +  G  G +  A D             N +P              + 
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRN----------VNGRPV-------------VL 111
Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-------------VSL 211
           K  +HS            +  L  V       ++N + +T+ HG              SL
Sbjct: 112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171
Query: 212 NLTKKFAQQLCCALAFLSS--PELSIIHC------DLKPENILLCSPKRSAIKIIDFGSS 263
             +K     +  A+A+L    P LS +H       DLKPENI+L   +   +K+ID G+ 
Sbjct: 172 KRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---LKLIDLGAV 228
Query: 264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK 316
             +    Y Y  +  +++PE++   P  +A D++++G  L  L    P  +G+
Sbjct: 229 SRINSFGYLY-GTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGR 279

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 19  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 73
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E ++  +L + ++      + L      + Q+   +A++
Sbjct: 74  QLYAV------VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +    Y   Q       + +PE 
Sbjct: 128 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 183
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 12  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 66
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 67  QLYAV------VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +        Q       + +PE 
Sbjct: 121 ER--MNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 176
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEK 162
           +I+ ++G G FG+V    +K     E C VAIK +K       ++ FL++A I  Q    
Sbjct: 32  KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASIMGQF--- 87
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
                     I+ L+G  T    + ++ E + + +L   +R  +     + L     + +
Sbjct: 88  ------DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGI 140
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
              + +LS  ++S +H DL   NIL+ S      K+ DFG S    + L    ++ Y   
Sbjct: 141 GSGMKYLS--DMSAVHRDLAARNILVNS--NLVCKVSDFGMS----RVLEDDPEAAYTTR 192
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
                  + +PE +    +  A D+WS G ++ E+ + GE  +   +  D +  I E   
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 252
Query: 331 MPP 333
           +PP
Sbjct: 253 LPP 255

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIH 169
           ++  LG+G FG+V          +VAIK +K    + + FL +AQ+    ++K+    + 
Sbjct: 22  LEVKLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQV----MKKLRHEKLV 76
Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
             Y V        +  + +V E +S  +L + ++      + L      A Q+   +A++
Sbjct: 77  QLYAV------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY----YRSPEV 284
               ++ +H DL+  NIL+   +    K+ DFG +  +        Q       + +PE 
Sbjct: 131 E--RMNYVHRDLRAANILVG--ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 186
Query: 285 LLGIPYDLAIDMWSLGCILVELHT 308
            L   + +  D+WS G +L EL T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 113 EIDTLLGKGSFGQV----VKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEK 162
           +I+ ++G G FG+V    +K     E C VAIK +K       ++ FL++A I  Q    
Sbjct: 17  KIEKVIGVGEFGEVCSGRLKVPGKREIC-VAIKTLKAGYTDKQRRDFLSEASIMGQF--- 72
Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
                     I+ L+G  T    + ++ E + + +L   +R  +     + L     + +
Sbjct: 73  ------DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGI 125
Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
              + +LS  ++S +H DL   NIL+ S      K+ DFG S    + L    ++ Y   
Sbjct: 126 GSGMKYLS--DMSYVHRDLAARNILVNS--NLVCKVSDFGMS----RVLEDDPEAAYTTR 177
Query: 279 -------YRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
                  + +PE +    +  A D+WS G ++ E+ + GE  +   +  D +  I E   
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 237
Query: 331 MPP 333
           +PP
Sbjct: 238 LPP 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	437
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-177
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-174
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-156
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-152
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-149
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-136
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-78
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-64
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-62
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-62
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-59
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-59
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-58
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-56
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-56
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-56
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-56
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-55
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-55
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-55
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-55
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-54
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-54
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-54
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-54
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-54
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-54
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-54
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-54
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-54
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-53
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-53
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-53
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-52
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-51
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-49
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-48
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-48
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-47
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-46
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-46
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-46
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-45
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-43
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-43
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-43
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-43
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-43
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-43
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-42
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-42
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-41
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-04
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-41
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-41
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-41
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-41
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-41
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-41
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-40
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-40
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-40
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-40
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-40
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-40
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-39
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-39
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-39
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-39
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-39
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-39
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-39
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	9e-39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-38
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-38
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-38
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-38
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-38
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-38
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-37
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-37
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-05
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-37
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	7e-37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	9e-37
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-36
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-36
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-36
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-35
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-35
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-35
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-34
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-34
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-34
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-34
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-33
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-33
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-32
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-32
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-32
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-32
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-32
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-32
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-32
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-31
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-30
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-30
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-30
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-30
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-30
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-30
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-30
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-30
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-30
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-29
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-29
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-29
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-29
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	6e-29
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-29
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-29
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-28
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-28
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-28
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-28
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-27
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-27
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-27
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-27
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-27
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	8e-27
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-26
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-26
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-26
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-26
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	6e-26
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	7e-26
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-26
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-26
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-25
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-25
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-25
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-25
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-25
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	9e-25
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-25
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-24
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-24
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-24
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-23
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-23
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-23
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-23
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-22
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-22
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-22
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-22
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-21
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-19
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-19
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-19
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-18
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-18
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-17
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-17
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-17
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	6e-17
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-17
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-16
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-16
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-16
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-16
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-16
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-16
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-16
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-16
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-15
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-15
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-15
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-15
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-15
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-15
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	7e-15
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-15
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-15
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-14
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-14
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-14
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-14
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-14
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-14
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	7e-14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-14
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-13
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-13
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-12
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	7e-12
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	9e-11
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-09
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-09
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-06

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  500 bits (1288), Expect = e-177
 Identities = 249/359 (69%), Positives = 307/359 (85%), Gaps = 2/359 (0%)

Query: 74  SHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHE 133
            + ++ S+ K+++ V+NDG+DD+NYDYI+K+GEK++DRYEID+L+GKGSFGQVVKA+D  
Sbjct: 18  LYFQSMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRV 77

Query: 134 EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFEL 192
           E+  VAIKIIKNKK FLNQAQIEV+LLE +NK D   +Y IV LK HF ++NHLCLVFE+
Sbjct: 78  EQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137

Query: 193 LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
           LSYNLY+L+RNTNF GVSLNLT+KFAQQ+C AL FL++PELSIIHCDLKPENILLC+PKR
Sbjct: 138 LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197

Query: 253 SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL 312
           SAIKI+DFGSSC +GQ +YQYIQSR+YRSPEVLLG+PYDLAIDMWSLGCILVE+HTGEPL
Sbjct: 198 SAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257

Query: 313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKE-RLPGS 371
           FSG NEVDQM KI+EVLG+PP ++L  A K  K+F++L D ++ LKK+ D ++E + PG+
Sbjct: 258 FSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGT 317

Query: 372 KRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           ++L  ILGV+ GGPGGRR  E GH++ADY+KFKDLILRML YDPK RI P   L+H FF
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF 376

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  493 bits (1270), Expect = e-174
 Identities = 154/403 (38%), Positives = 214/403 (53%), Gaps = 22/403 (5%)

Query: 32  RIPMQFRDPATAPLRKLSV---DLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYV 88
             PM         ++KL+      I +Y  I  +    KKR+                  
Sbjct: 28  ATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTG------------GP 75

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
           +N G+DD+   Y+    +    RYE+  ++GKGSFGQVVKA+DH+    VA+K+++N+K 
Sbjct: 76  NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135

Query: 149 FLNQAQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH 207
           F  QA  E+++LE + K D  +   ++ +  +FT++NH+C+ FELLS NLY LI+   F 
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195

Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
           G SL L +KFA  +   L  L      IIHCDLKPENILL    RS IK+IDFGSSC+  
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHK--NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253

Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Q +Y YIQSR+YR+PEV+LG  Y + IDMWSLGCIL EL TG PL  G++E DQ+  +IE
Sbjct: 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE 313

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
           +LGMP   LL  + +   +        Y    +       L G +     L    G P  
Sbjct: 314 LLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKL---RGPPES 370

Query: 388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           R          D   F D + + L +DP  R++P   LRH + 
Sbjct: 371 REWGNALKG-CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  445 bits (1146), Expect = e-156
 Identities = 104/379 (27%), Positives = 176/379 (46%), Gaps = 44/379 (11%)

Query: 75  HNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE 134
           H+    +   +        DDE   +  K G    + + +   +G G+FG+V+     + 
Sbjct: 2   HHHHHHSSGRENL--YFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDN 59

Query: 135 KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS 194
           K   A+K+++N K +   A+IE  +L+KI   DI++  IVK  G F + +H+CL+FE L 
Sbjct: 60  KKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLG 119

Query: 195 YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP---- 250
            +LY +I   N++G  +   K +  ++  AL +L   ++S+ H DLKPENILL  P    
Sbjct: 120 PSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR--KMSLTHTDLKPENILLDDPYFEK 177

Query: 251 -------------------KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYD 291
                              K + IK+IDFG +          I +R YR+PEV+L + +D
Sbjct: 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWD 237

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
           ++ DMWS GC+L EL+TG  LF     ++ +  +  ++   P  +L+ A+KT+       
Sbjct: 238 VSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNK 297

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           D   +      +    +   K+                   P + +  +  F D +  +L
Sbjct: 298 DELKLAWPENASSINSIKHVKKC-----------------LPLYKIIKHELFCDFLYSIL 340

Query: 412 TYDPKKRISPTNVLRHEFF 430
             DP  R SP  +L+H+F 
Sbjct: 341 QIDPTLRPSPAELLKHKFL 359

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  434 bits (1117), Expect = e-152
 Identities = 108/356 (30%), Positives = 175/356 (49%), Gaps = 40/356 (11%)

Query: 94  DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNKKPFLNQ 152
           DD+    + + G+   +RYEI   LG+G+FG+VV+  DH   K QVA+KII+N   +   
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62

Query: 153 AQIEVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL 211
           A++E+ +L+KI + D  +++  V +   F +  H+C+ FELL  N +  ++  NF    L
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122

Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-----------------PKRSA 254
              +  A QLC AL FL   E  + H DLKPENIL  +                  K ++
Sbjct: 123 PHVRHMAYQLCHALRFLH--ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180

Query: 255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS 314
           I++ DFGS+    +     + +R+YR PEV+L + +    D+WS+GCIL E + G  LF 
Sbjct: 181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240

Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRL 374
                + +  + ++LG  P +++H   K  KYF +               +      K L
Sbjct: 241 THENREHLVMMEKILGPIPSHMIHRTRKQ-KYFYKGGLVWDENSSD---GRYVKENCKPL 296

Query: 375 DTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + +  D+                ++++  DL+ RML +DP +RI+    L H FF
Sbjct: 297 KSYMLQDS---------------LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  427 bits (1100), Expect = e-149
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 42/360 (11%)

Query: 97  NYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIKNKKPFLNQAQI 155
           +   I + G+    RYEI   LG+G+FG+VV+  DH+   + VA+KI+KN   +   A+ 
Sbjct: 1   SMHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS 60

Query: 156 EVQLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT 214
           E+Q+LE +N  D +S +  V++   F    H+C+VFELL  + Y+ I+   F    L+  
Sbjct: 61  EIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120

Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-----------------PKRSAIKI 257
           +K A Q+C ++ FL      + H DLKPENIL                         IK+
Sbjct: 121 RKMAYQICKSVNFLH--SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178

Query: 258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
           +DFGS+ +  +     + +R+YR+PEV+L + +    D+WS+GCIL+E + G  +F   +
Sbjct: 179 VDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238

Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI 377
             + +  +  +LG  P +++    K  KYF     +     + +   +      K L   
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKR-KYFH---HDRLDWDEHSSAGRYVSRACKPLKEF 294

Query: 378 LGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF--LKHSV 435
           +   +                ++ +  DLI +ML YDP KRI+    L+H FF  LK S+
Sbjct: 295 MLSQD---------------VEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  394 bits (1015), Expect = e-136
 Identities = 106/358 (29%), Positives = 161/358 (44%), Gaps = 43/358 (12%)

Query: 94  DDENYDYIIKHGEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
                 +    GE + D RY +   LG G F  V  A D      VA+KI++  K +   
Sbjct: 2   YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61

Query: 153 AQIEVQLLEKINKADIH------SRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIR 202
           A+ E++LL+++N AD        + +I+KL  HF  K     H+ +VFE+L  NL  LI+
Sbjct: 62  AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121

Query: 203 NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA----IKII 258
                G+ L   K+ ++QL   L ++      IIH D+KPEN+L+           IKI 
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIA 180

Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK-- 316
           D G++C   +     IQ+R YRSPEVLLG P+    D+WS  C++ EL TG+ LF     
Sbjct: 181 DLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240

Query: 317 ----NEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSK 372
                + D + +IIE+LG  P YLL     T  +F+       + K      ++ L    
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL---- 296

Query: 373 RLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                              +   S  +  +  D +  ML  DP+KR     ++ H + 
Sbjct: 297 -----------------TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  247 bits (633), Expect = 2e-78
 Identities = 104/404 (25%), Positives = 173/404 (42%), Gaps = 86/404 (21%)

Query: 91  DGHDDENYD----YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK 146
           +  D  +Y     +++K G+ F  RY +   LG G F  V  ++D + K  VA+K++K+ 
Sbjct: 14  EQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA 73

Query: 147 KPFLNQAQIEVQLLEKINKADIH---SRYIVKLKGHFTWK----NHLCLVFELLSYNLYN 199
           + +   A  E++LL+ +  +D +      +V+L   F        H+C+VFE+L ++L  
Sbjct: 74  EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLK 133

Query: 200 LIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP--------- 250
            I  +N+ G+ L   KK  QQ+   L +L + +  IIH D+KPENILL            
Sbjct: 134 WIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAA 192

Query: 251 --------------------------------------KRSAIKIIDFGSSCHVGQTLYQ 272
                                                 ++  +KI D G++C V +   +
Sbjct: 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE 252

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN------EVDQMTKII 326
            IQ+R YRS EVL+G  Y+   D+WS  C+  EL TG+ LF   +      + D +  II
Sbjct: 253 DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 312

Query: 327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPG 386
           E+LG  P  L+     + ++F +         K       +L      + ++        
Sbjct: 313 ELLGKVPRKLIVAGKYSKEFFTK---------KGDLKHITKLKPWGLFEVLVE------- 356

Query: 387 GRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                +   S  +   F D +L ML   P+KR +    LRH + 
Sbjct: 357 -----KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  211 bits (539), Expect = 4e-64
 Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 56/331 (16%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
            Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++    H 
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLD----H- 106

Query: 171 RYIVKLKGHFT------WKNHLCLVFELLSYNLYNLIRNTNFHG--VSLNLTKKFAQQLC 222
             IV+L+  F        + +L LV + +   +Y + R+ +     + +   K +  QL 
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS--SCHVGQTLYQYIQSRYYR 280
            +LA++ S    I H D+KP+N+LL  P  + +K+ DFGS      G+    YI SRYYR
Sbjct: 167 RSLAYIHS--FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 223

Query: 281 SPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           +PE++ G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P       
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP------- 276

Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD 399
              T +    ++ N    K     + +  P +K                R   P  ++  
Sbjct: 277 ---TREQIREMNPNYTEFKFP---QIKAHPWTKVF--------------RPRTPPEAI-- 314

Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 L  R+L Y P  R++P     H FF
Sbjct: 315 -----ALCSRLLEYTPTARLTPLEACAHSFF 340

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  205 bits (523), Expect = 2e-62
 Identities = 91/339 (26%), Positives = 145/339 (42%), Gaps = 53/339 (15%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
            K +DR++++ + G+G+FG V    +      VAIK +     F      E+Q+++ +  
Sbjct: 19  RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAV 75

Query: 166 ADIHSRYIVKLKGHFTWKNH-------LCLVFELLSYNLYNLIRNTNFHG--VSLNLTKK 216
              H   IV+L+ +F            L +V E +   L+   RN           L K 
Sbjct: 76  LH-H-PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS--SCHVGQTLYQYI 274
           F  QL  ++  L  P +++ H D+KP N+L+ +     +K+ DFGS       +    YI
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDFGSAKKLSPSEPNVAYI 192

Query: 275 QSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            SRYYR+PE++ G   Y  A+D+WS+GCI  E+  GEP+F G N   Q+ +I+ VLG P 
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252

Query: 334 GYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
             +L     S T                      + +P S                   +
Sbjct: 253 REVLRKLNPSHTDVDLY---------------NSKGIPWSNVF-------------SDHS 284

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 A      DL+  +L Y P++R+ P   L H +F
Sbjct: 285 LKDAKEA-----YDLLSALLQYLPEERMKPYEALCHPYF 318

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  204 bits (522), Expect = 5e-62
 Identities = 101/345 (29%), Positives = 152/345 (44%), Gaps = 69/345 (20%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           K GE+    Y    ++G GSFG V +A   E   +VAIK +   K F N+   E+Q++  
Sbjct: 33  KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRFKNR---ELQIMRI 88

Query: 163 INKADIHSRYIVKLK------GHFTWKNHLCLVFELLSYNLYNLIR--NTNFHGVSLNLT 214
           +     H   +V LK      G    +  L LV E +   +Y   R        + + L 
Sbjct: 89  VK----HP-NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143

Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS--SCHVGQTLYQ 272
           K +  QL  +LA++ S  + I H D+KP+N LL  P    +K+IDFGS      G+    
Sbjct: 144 KLYMYQLLRSLAYIHS--IGICHRDIKPQN-LLLDPPSGVLKLIDFGSAKILIAGEPNVS 200

Query: 273 YIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
           YI SRYYR+PE++ G   Y   ID+WS GC++ EL  G+PLF G++ +DQ+ +II+VLG 
Sbjct: 201 YICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGT 260

Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
           P                       +   + +  + + P                      
Sbjct: 261 P-------------------SREQIKTMNPNYMEHKFP---------------------Q 280

Query: 392 EPGHSLADYMKFK------DLILRMLTYDPKKRISPTNVLRHEFF 430
              H  +   + +      DLI R+L Y P  R++    L H FF
Sbjct: 281 IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  197 bits (503), Expect = 3e-59
 Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 92/370 (24%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           E    +Y +   LG GSFG V + FD E   + A+K +     + N+   E+ +++ ++ 
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR---ELDIMKVLD- 58

Query: 166 ADIHSRYIVKLKGHFTWK--------------------------------------NHLC 187
              H   I+KL  +F                                          +L 
Sbjct: 59  ---H-VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114

Query: 188 LVFELLSYNLYNLIRNTNFHG--VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI 245
           ++ E +   L+ ++++    G  + +NL   +  QL  A+ F+ S  L I H D+KP+N+
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--LGICHRDIKPQNL 172

Query: 246 LLCSPKRSAIKIIDFGS--SCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCI 302
           L+ + K + +K+ DFGS       +    YI SR+YR+PE++LG   Y  +ID+WS+GC+
Sbjct: 173 LV-NSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231

Query: 303 LVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTD 362
             EL  G+PLFSG+  +DQ+ +II+++G P    +   +    Y +              
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHYTEV------------- 276

Query: 363 TRKERLPGSKR--LDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS 420
               R P  K      IL              P  ++       DL+ ++L Y+P  RI+
Sbjct: 277 ----RFPTLKAKDWRKIL----------PEGTPSLAI-------DLLEQILRYEPDLRIN 315

Query: 421 PTNVLRHEFF 430
           P   + H FF
Sbjct: 316 PYEAMAHPFF 325

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  194 bits (496), Expect = 5e-59
 Identities = 85/331 (25%), Positives = 142/331 (42%), Gaps = 53/331 (16%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--KPFLNQAQI-EVQLLEKINK 165
           +++YE    +G+GS+G V K  + +    VAIK        P + +  + E+++L+++  
Sbjct: 2   MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK- 60

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
              H   +V L   F  K  L LVFE   + + + +      GV  +L K    Q   A+
Sbjct: 61  ---HP-NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAV 115

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSP 282
            F      + IH D+KPENIL+   K S IK+ DFG               + +R+YRSP
Sbjct: 116 NFCHK--HNCIHRDVKPENILIT--KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171

Query: 283 EVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           E+L+G   Y   +D+W++GC+  EL +G PL+ GK++VDQ+  I + LG          S
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231

Query: 342 KTSKYFDRLSDNSYVLKKSTDTR--KERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD 399
               +      +   +    D    + + P    +     +                   
Sbjct: 232 TNQYF------SGVKIPDPEDMEPLELKFP---NISY-PAL------------------- 262

Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 L+   L  DP +R++   +L H +F
Sbjct: 263 -----GLLKGCLHMDPTERLTCEQLLHHPYF 288

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  193 bits (494), Expect = 2e-58
 Identities = 86/331 (25%), Positives = 149/331 (45%), Gaps = 53/331 (16%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKI 163
           +++YE   L+G+GS+G V+K  + +    VAIK                A  E++LL+++
Sbjct: 24  MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK--IAMREIKLLKQL 81

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                H   +V L      K    LVFE + + + + +     +G+   + +K+  Q+  
Sbjct: 82  R----HE-NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIIN 135

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYR 280
            + F  S   +IIH D+KPENIL+   +   +K+ DFG   +    G+     + +R+YR
Sbjct: 136 GIGFCHS--HNIIHRDIKPENILVS--QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191

Query: 281 SPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           +PE+L+G + Y  A+D+W++GC++ E+  GEPLF G +++DQ+  I+  LG         
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251

Query: 340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD 399
            +K   +    +       K  +  + R P   +L                         
Sbjct: 252 FNKNPVF----AGVRLPEIKEREPLERRYP---KLS---------EVVI----------- 284

Query: 400 YMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                DL  + L  DP KR     +L H+FF
Sbjct: 285 -----DLAKKCLHIDPDKRPFCAELLHHDFF 310

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  193 bits (491), Expect = 1e-56
 Identities = 97/334 (29%), Positives = 147/334 (44%), Gaps = 47/334 (14%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
           L RY+    +G G+ G V  A+D      VAIK  K  +PF NQ        E+ L++ +
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 118

Query: 164 NKADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           N  +I S   +   +        + LV EL+  NL  +I+      +          Q+ 
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQML 174

Query: 223 CALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLY--QYIQSR 277
           C +  L S    IIH DLKP NI++   C+     +KI+DFG +   G +     Y+ +R
Sbjct: 175 CGIKHLHS--AGIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTSFMMTPYVVTR 227

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YYR+PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE LG P    +
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287

Query: 338 HGA-SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
                    Y +         K +  T  +  P S                R        
Sbjct: 288 KKLQPTVRNYVENRP------KYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------- 333

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                   DL+ +ML  DP KRIS  + L+H + 
Sbjct: 334 --------DLLSKMLVIDPAKRISVDDALQHPYI 359

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  187 bits (478), Expect = 2e-56
 Identities = 90/344 (26%), Positives = 139/344 (40%), Gaps = 65/344 (18%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQ 158
           G     RYE    +G G++G V KA D      VA+K ++                 EV 
Sbjct: 4   GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63

Query: 159 LLEKINKADIHSRYIVKLK-----GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL 213
           LL ++   + H   +V+L           +  + LVFE +  +L   +      G+    
Sbjct: 64  LLRRLEAFE-H-PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLY 271
            K   +Q    L FL +    I+H DLKPENIL+       +K+ DFG          L 
Sbjct: 122 IKDLMRQFLRGLDFLHA--NCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALT 177

Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
             + + +YR+PEVLL   Y   +DMWS+GCI  E+   +PLF G +E DQ+ KI +++G+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237

Query: 332 P-----PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPG 386
           P     P                L   ++  +     +   +P    ++           
Sbjct: 238 PPEDDWPR------------DVSLPRGAFPPRGPRPVQ-SVVP---EME---------ES 272

Query: 387 GRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           G                  L+L MLT++P KRIS    L+H + 
Sbjct: 273 GA----------------QLLLEMLTFNPHKRISAFRALQHSYL 300

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  189 bits (482), Expect = 3e-56
 Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 55/338 (16%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
           L RY+    +G G+ G V  A+D   +  VAIK  K  +PF NQ        E+ L++ +
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCV 81

Query: 164 NKADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ--- 219
           N  +I     +   +        + +V EL+  NL  +I+        + L  +      
Sbjct: 82  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--------MELDHERMSYLL 133

Query: 220 -QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLY--QY 273
            Q+ C +  L S    IIH DLKP NI++   C+     +KI+DFG +   G +     Y
Sbjct: 134 YQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCT-----LKILDFGLARTAGTSFMMTPY 186

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           + +RYYR+PEV+LG+ Y   +D+WS+GCI+ E+  G  LF G + +DQ  K+IE LG P 
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246

Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD-TILGVDNGGPGGRRRNE 392
              +     T +        +YV         E  P         L  D   P     N+
Sbjct: 247 PEFMKKLQPTVR--------TYV---------ENRPKYAGYSFEKLFPDVLFPADSEHNK 289

Query: 393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              S A     +DL+ +ML  D  KRIS    L+H + 
Sbjct: 290 LKASQA-----RDLLSKMLVIDASKRISVDEALQHPYI 322

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  185 bits (473), Expect = 2e-55
 Identities = 93/337 (27%), Positives = 148/337 (43%), Gaps = 63/337 (18%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
            +YE    +G+G++G+V KA D +   + VA+K ++    ++        EV +L  +  
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70

Query: 166 ADIHSRYIVKLK-----GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
            + H   +V+L           +  L LVFE +  +L   +      GV     K    Q
Sbjct: 71  FE-H-PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRY 278
           L   L FL S    ++H DLKP+NIL+       IK+ DFG +        L   + + +
Sbjct: 129 LLRGLDFLHS--HRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMALTSVVVTLW 184

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----P 333
           YR+PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P     P
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

Query: 334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP 393
                           L   ++  K +    K        +D           G+     
Sbjct: 245 R------------DVALPRQAFHSKSAQPIEKFV----TDID---------ELGK----- 274

Query: 394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      DL+L+ LT++P KRIS  + L H +F
Sbjct: 275 -----------DLLLKCLTFNPAKRISAYSALSHPYF 300

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  184 bits (470), Expect = 3e-55
 Identities = 75/347 (21%), Positives = 133/347 (38%), Gaps = 72/347 (20%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
             RY     LG G  G V  A D++   +VAIK    K    +   +     E++++ ++
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK----KIVLTDPQSVKHALREIKIIRRL 65

Query: 164 NKADI---------HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT 214
           +  +I             +    G  T  N + +V E +  +L N++           L 
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE-------QGPLL 118

Query: 215 KKFAQ----QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSC 264
           ++ A+    QL   L ++ S   +++H DLKP N+ + + +   +KI DFG         
Sbjct: 119 EEHARLFMYQLLRGLKYIHSA--NVLHRDLKPANLFINT-EDLVLKIGDFGLARIMDPHY 175

Query: 265 HVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
                L + + +++YRSP +LL    Y  AIDMW+ GCI  E+ TG+ LF+G +E++QM 
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNG 383
            I+E + +               + R                              +   
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIR-----------------NDMTEPHKPLTQLLPGI 278

Query: 384 GPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                                D + ++LT+ P  R++    L H + 
Sbjct: 279 SREAV----------------DFLEQILTFSPMDRLTAEEALSHPYM 309

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  184 bits (469), Expect = 6e-55
 Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 60/337 (17%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKAD 167
            +++    LG G++  V K  +      VA+K +K  +++   + A  E+ L++++    
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK--- 61

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFH----GVSLNLTKKFAQQLCC 223
            H   IV+L      +N L LVFE +  +L   + +        G+ LNL K F  QL  
Sbjct: 62  -HE-NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
            LAF    E  I+H DLKP+N+L+   KR  +K+ DFG +   G  +  +   + + +YR
Sbjct: 120 GLAFC--HENKILHRDLKPQNLLI--NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175

Query: 281 SPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PG 334
           +P+VL+G   Y  +ID+WS GCIL E+ TG+PLF G N+ +Q+  I +++G P     P 
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235

Query: 335 YLLHGASKTSKYFDRLSD-NSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP 393
                         +L   N  + ++     ++ L    +      +D            
Sbjct: 236 ------------VTKLPKYNPNIQQRPPRDLRQVLQPHTK----EPLDGNL--------- 270

Query: 394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      D +  +L  +P  R+S    L H +F
Sbjct: 271 ----------MDFLHGLLQLNPDMRLSAKQALHHPWF 297

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  186 bits (474), Expect = 6e-55
 Identities = 98/362 (27%), Positives = 151/362 (41%), Gaps = 77/362 (21%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ--AQ---IEVQLLEKI 163
           L +YE+   LGKG++G V K+ D      VA+K  K    F N   AQ    E+ +L ++
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK--KIFDAFQNSTDAQRTFREIMILTEL 65

Query: 164 NKADIHSRYIVKLKGHFTWKN--HLCLVFELLSYNLYNLIRN---TNFHGVSLNLTKKFA 218
           +    H   IV L       N   + LVF+ +  +L+ +IR       H       +   
Sbjct: 66  SG---H-ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH------KQYVV 115

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG-------------- 261
            QL   + +L S    ++H D+KP NILL   C      +K+ DFG              
Sbjct: 116 YQLIKVIKYLHSGG--LLHRDMKPSNILLNAECH-----VKVADFGLSRSFVNIRRVTNN 168

Query: 262 ----------SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGE 310
                     +       L  Y+ +R+YR+PE+LLG   Y   IDMWSLGCIL E+  G+
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

Query: 311 PLFSGKNEVDQMTKIIEVLGMPPGYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERL 368
           P+F G + ++Q+ +II V+  P    +    +       + L              K  +
Sbjct: 229 PIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLK------------EKVEI 276

Query: 369 PGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHE 428
             S + D      N            +  A      DL+ ++L ++P KRIS  + L+H 
Sbjct: 277 RQSNKRDIFTKWKNLLL-KINPKADCNEEA-----LDLLDKLLQFNPNKRISANDALKHP 330

Query: 429 FF 430
           F 
Sbjct: 331 FV 332

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  183 bits (468), Expect = 1e-54
 Identities = 109/344 (31%), Positives = 151/344 (43%), Gaps = 68/344 (19%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQL 159
               +DRY   T LG+G++G+V KA D      VAIK I+ +      P    A  EV L
Sbjct: 29  SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG--TAIREVSL 86

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           L+++     H   I++LK      + L L+FE    +L   +       VS+ + K F  
Sbjct: 87  LKELQ----HR-NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLY 139

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQY--- 273
           QL   + F  S     +H DLKP+N+LL    + +   +KI DFG +   G  + Q+   
Sbjct: 140 QLINGVNFCHSR--RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197

Query: 274 IQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           I + +YR PE+LLG   Y  ++D+WS+ CI  E+    PLF G +E+DQ+ KI EVLG+P
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257

Query: 333 -----PGYLLHGASKTSKYFDRLSD-NSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPG 386
                PG               L D      K    T K  L     LD           
Sbjct: 258 DDTTWPG------------VTALPDWKQSFPKFRGKTLKRVLG--ALLD---------DE 294

Query: 387 GRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           G                 DL+  ML  DP KRIS  N L H +F
Sbjct: 295 GL----------------DLLTAMLEMDPVKRISAKNALEHPYF 322

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  183 bits (467), Expect = 1e-54
 Identities = 84/333 (25%), Positives = 139/333 (41%), Gaps = 59/333 (17%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKA 166
           ++ Y     LG+G++  V K         VA+K I+  +++     A  EV LL+ +   
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-- 58

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             H   IV L      +  L LVFE L  +L   + +   + ++++  K F  QL   LA
Sbjct: 59  --H-ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLA 114

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSPE 283
           +       ++H DLKP+N+L+   +R  +K+ DFG +         Y   + + +YR P+
Sbjct: 115 YCHRQ--KVLHRDLKPQNLLI--NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170

Query: 284 VLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PGYLL 337
           +LLG   Y   IDMW +GCI  E+ TG PLF G    +Q+  I  +LG P     PG   
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI-- 228

Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSL 397
                                 + + +    P  +    +         G          
Sbjct: 229 --------------------LSNEEFKTYNYPKYRAEALLSHAPRLDSDGA--------- 259

Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  DL+ ++L ++ + RIS  + ++H FF
Sbjct: 260 -------DLLTKLLQFEGRNRISAEDAMKHPFF 285

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  181 bits (462), Expect = 2e-54
 Identities = 94/337 (27%), Positives = 146/337 (43%), Gaps = 68/337 (20%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKI 163
           +++Y     +G+G++G V KA ++  +   A+K I+ +K     P       E+ +L+++
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPS--TTIREISILKEL 57

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                HS  IVKL      K  L LVFE L  +L  L+      G+     K F  QL  
Sbjct: 58  K----HS-NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLN 111

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYR 280
            +A+       ++H DLKP+N+L+   +   +KI DFG +   G  + +Y   I + +YR
Sbjct: 112 GIAYCHD--RRVLHRDLKPQNLLI--NREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167

Query: 281 SPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-----PG 334
           +P+VL+G   Y   ID+WS+GCI  E+  G PLF G +E DQ+ +I  +LG P     P 
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 335 YLLHGASKTSKYFDRLSD-NSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP 393
                          L   +           +  L     LD           G      
Sbjct: 228 ------------VTELPKYDPNFTVYEPLPWESFLK---GLD---------ESGI----- 258

Query: 394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                      DL+ +ML  DP +RI+    L H +F
Sbjct: 259 -----------DLLSKMLKLDPNQRITAKQALEHAYF 284

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  183 bits (467), Expect = 3e-54
 Identities = 83/336 (24%), Positives = 140/336 (41%), Gaps = 65/336 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKIN 164
             Y   T +G G++G V  A D     +VAIK  K  +PF ++        E+ LL+ + 
Sbjct: 24  KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQ 81

Query: 165 KADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQL 221
             ++     +              LV   +  +L  ++    +          +    Q+
Sbjct: 82  HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK------IQYLVYQM 135

Query: 222 CCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY 278
              L ++ S    ++H DLKP N+ +   C      +KI+DFG + H    +  Y+ +R+
Sbjct: 136 LKGLKYIHSAG--VVHRDLKPGNLAVNEDCE-----LKILDFGLARHADAEMTGYVVTRW 188

Query: 279 YRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           YR+PEV+L    Y+  +D+WS+GCI+ E+ TG+ LF GK+ +DQ+T+I++V G+P    +
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248

Query: 338 H--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGH 395
                     Y   L             +  R   ++                    P  
Sbjct: 249 QKLNDKAAKSYIQSLP------------QTPRKDFTQLF------------------PRA 278

Query: 396 S-LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           S  A      DL+ +ML  D  KR++    L H FF
Sbjct: 279 SPQA-----ADLLEKMLELDVDKRLTAAQALTHPFF 309

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  181 bits (461), Expect = 4e-54
 Identities = 93/336 (27%), Positives = 150/336 (44%), Gaps = 64/336 (19%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           + +YE    +G+G++G V KA + E    VA+K ++   + +   + A  E+ LL+++  
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
              H + IV+L         L LVFE    +L     + N   +   + K F  QL   L
Sbjct: 60  ---H-KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQSRYYRSP 282
            F  S   +++H DLKP+N+L+   +   +K+ +FG +   G  +  Y   + + +YR P
Sbjct: 115 GFCHS--RNVLHRDLKPQNLLI--NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170

Query: 283 EVLLGIP-YDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP-----PGY 335
           +VL G   Y  +IDMWS GCI  EL   G PLF G +  DQ+ +I  +LG P     P  
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS- 229

Query: 336 LLHGASKTSKYFDRLSD-NSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
                        +L D   Y +  +T +    +P   +L+           GR      
Sbjct: 230 -----------MTKLPDYKPYPMYPATTSLVNVVP---KLN---------ATGR------ 260

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                     DL+  +L  +P +RIS    L+H +F
Sbjct: 261 ----------DLLQNLLKCNPVQRISAEEALQHPYF 286

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  181 bits (461), Expect = 6e-54
 Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 65/340 (19%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQL 159
            +  +++Y+    +G+G++G V KA D + +  VA+K I+        P    A  E+ L
Sbjct: 16  FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPS--TAIREISL 72

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           L++++    H   IV L      +  L LVFE +  +L  ++      G+  +  K +  
Sbjct: 73  LKELH----HP-NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLY 126

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQS 276
           QL   +A        I+H DLKP+N+L+      A+K+ DFG +   G  +  Y   + +
Sbjct: 127 QLLRGVAHCHQ--HRILHRDLKPQNLLI--NSDGALKLADFGLARAFGIPVRSYTHEVVT 182

Query: 277 RYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP--- 332
            +YR+P+VL+G   Y  ++D+WS+GCI  E+ TG+PLF G  + DQ+ KI  +LG P   
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPR 242

Query: 333 --PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRR 390
             P                        ++    ++      ++      +      G   
Sbjct: 243 EWPQV----------------------QELPLWKQRTFQVFEKKPWSSIIPGFCQEGI-- 278

Query: 391 NEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                         DL+  ML +DP KRIS  + + H +F
Sbjct: 279 --------------DLLSNMLCFDPNKRISARDAMNHPYF 304

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  182 bits (465), Expect = 7e-54
 Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 66/337 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKIN 164
             Y     +G G++G V  A D     +VAIK  K  +PF ++        E++LL+ + 
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK--KLYRPFQSELFAKRAYRELRLLKHMR 82

Query: 165 KADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN---TNFHGVSLNLTKKFAQQ 220
             ++     +              LV   +  +L  L+++              +    Q
Sbjct: 83  HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR------IQFLVYQ 136

Query: 221 LCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           +   L ++ +    IIH DLKP N+ +   C      +KI+DFG +      +  Y+ +R
Sbjct: 137 MLKGLRYIHAA--GIIHRDLKPGNLAVNEDCE-----LKILDFGLARQADSEMTGYVVTR 189

Query: 278 YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           +YR+PEV+L    Y   +D+WS+GCI+ E+ TG+ LF G + +DQ+ +I++V G PP   
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249

Query: 337 LH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
           +    + +   Y   L               E+   +  L                    
Sbjct: 250 VQRLQSDEAKNYMKGLP------------ELEKKDFASIL------------------TN 279

Query: 395 HS-LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            S LA      +L+ +ML  D ++R++    L H +F
Sbjct: 280 ASPLA-----VNLLEKMLVLDAEQRVTAGEALAHPYF 311

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  182 bits (464), Expect = 7e-54
 Identities = 62/308 (20%), Positives = 116/308 (37%), Gaps = 47/308 (15%)

Query: 89  HNDGHDDENYDYIIKHGEKF---LDRYEIDTLLGKGSFGQVVKA-----FDHEEKCQVAI 140
           + +  + +     IK   +F        +  LLG+G+F QV +A      D + K +  +
Sbjct: 41  YPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVL 100

Query: 141 KIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY----N 196
           K+ K       +  I  QL+E++  +  H    +K      ++N   LV EL SY    N
Sbjct: 101 KVQK--PANPWEFYIGTQLMERLKPSMQH--MFMKFYSAHLFQNGSVLVGELYSYGTLLN 156

Query: 197 LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP------ 250
             NL +NT    +   L   FA ++   +  +      IIH D+KP+N +L +       
Sbjct: 157 AINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD--CEIIHGDIKPDNFILGNGFLEQDD 214

Query: 251 ---KRSAIKIIDFGSSCHV-----GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCI 302
                + + +ID G S  +     G       ++  ++  E+L   P++  ID + +   
Sbjct: 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAAT 274

Query: 303 LVELHTGEPL--------------FSGKNEVDQMTKIIEV-LGMPPGYLLHGASKTSKYF 347
           +  +  G  +              F     +D   +   V L +P  + L       +  
Sbjct: 275 VYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334

Query: 348 DRLSDNSY 355
            ++    Y
Sbjct: 335 KKVFQQHY 342

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  182 bits (463), Expect = 9e-54
 Identities = 87/349 (24%), Positives = 143/349 (40%), Gaps = 76/349 (21%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
              +++ +LLG+G++G V  A        VAIK I+   PF           E+++L+  
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRN---TNFHGVSLNLTKKFAQQ 220
              +I + + ++    F   N + ++ EL+  +L+ +I     ++ H       + F  Q
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH------IQYFIYQ 120

Query: 221 LCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG-------------SSC 264
              A+  L      +IH DLKP N+L+   C      +K+ DFG                
Sbjct: 121 TLRAVKVLHGSN--VIHRDLKPSNLLINSNCD-----LKVCDFGLARIIDESAADNSEPT 173

Query: 265 HVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
                + +++ +R+YR+PEV+L    Y  A+D+WS GCIL EL    P+F G++   Q+ 
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233

Query: 324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRK--ERLPGSKRLDTILGVD 381
            I  ++G P                  SDN     +S   R+  + LP            
Sbjct: 234 LIFGIIGTPH-----------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276

Query: 382 NGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              P G                 DL+ RML +DP KRI+    L H + 
Sbjct: 277 RVNPKGI----------------DLLQRMLVFDPAKRITAKEALEHPYL 309

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  182 bits (463), Expect = 1e-53
 Identities = 80/353 (22%), Positives = 127/353 (35%), Gaps = 72/353 (20%)

Query: 104 HGEKF--LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI------ 155
             E       Y +   +  GS+G V    D E    VAIK + N         I      
Sbjct: 14  IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGI-PVAIKRVFNTVSDGRTVNILSDSFL 72

Query: 156 ------EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGV 209
                 E++LL   +  +I     + +       + L LV EL+  +L  +I +      
Sbjct: 73  CKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR---- 128

Query: 210 SLNLTKKFAQ----QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG- 261
            + ++ +  Q     +   L  L      ++H DL P NILL          I I DF  
Sbjct: 129 -IVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNND-----ITICDFNL 180

Query: 262 -SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
                       Y+  R+YR+PE+++    +   +DMWS GC++ E+   + LF G    
Sbjct: 181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240

Query: 320 DQMTKIIEVLGMPPGYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI 377
           +Q+ KI+EV+G P    +    +     Y                  +  L         
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYL-----------------RNSLSNVPARAWT 283

Query: 378 LGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             V    P                   DLI +ML ++P++RIS    LRH +F
Sbjct: 284 AVVPTADPVAL----------------DLIAKMLEFNPQRRISTEQALRHPYF 320

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  180 bits (459), Expect = 4e-53
 Identities = 90/346 (26%), Positives = 146/346 (42%), Gaps = 83/346 (23%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----------EVQ 158
             RYE    LG+G F  V KA D      VAIK IK      ++++           E++
Sbjct: 9   AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK----LGHRSEAKDGINRTALREIK 64

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
           LL++++    H   I+ L   F  K+++ LVF+ +  +L  +I++ +   ++ +  K + 
Sbjct: 65  LLQELS----HP-NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYM 118

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY---IQ 275
                 L +L      I+H DLKP N+LL   +   +K+ DFG +   G     Y   + 
Sbjct: 119 LMTLQGLEYLHQ--HWILHRDLKPNNLLL--DENGVLKLADFGLAKSFGSPNRAYTHQVV 174

Query: 276 SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP-- 332
           +R+YR+PE+L G   Y + +DMW++GCIL EL    P   G +++DQ+T+I E LG P  
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 234

Query: 333 ---PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRR 389
              P                                  LP                    
Sbjct: 235 EQWPDM------------------------------CSLPDYVTF--------------- 249

Query: 390 RNEPGHSLADYMKF-----KDLILRMLTYDPKKRISPTNVLRHEFF 430
           ++ PG  L            DLI  +  ++P  RI+ T  L+ ++F
Sbjct: 250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  180 bits (459), Expect = 6e-53
 Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 64/336 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKIN 164
           +RY+  + +G G++G V  AFD +   +VA+K +    PF +         E++LL+ + 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--PFQSIIHAKRTYRELRLLKHMK 86

Query: 165 KADIHS-RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ---- 219
             ++     +          N + LV  L+  +L N+++          LT    Q    
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-------CQKLTDDHVQFLIY 139

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
           Q+   L ++ S +  IIH DLKP N+ +   C      +KI+DFG + H    +  Y+ +
Sbjct: 140 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE-----LKILDFGLARHTADEMTGYVAT 192

Query: 277 RYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PE++L    Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

Query: 336 LLHG-ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
           LL   +S++++        +Y+         + L    +++         P         
Sbjct: 253 LLKKISSESAR--------NYI---------QSLTQMPKMNFANVFIGANPLAV------ 289

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                     DL+ +ML  D  KRI+    L H +F
Sbjct: 290 ----------DLLEKMLVLDSDKRITAAQALAHAYF 315

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  179 bits (457), Expect = 1e-52
 Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 72/342 (21%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKIN 164
            RY   + +G+G++G V  A+D+  K +VAIK I    PF +Q        E+++L +  
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFR 83

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ----Q 220
             +I     +           + +V +L+  +LY L++       + +L+         Q
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-------TQHLSNDHICYFLYQ 136

Query: 221 LCCALAFLSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG------SSCHVGQTLY 271
           +   L ++ S    ++H DLKP N+LL   C      +KI DFG              L 
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLT 189

Query: 272 QYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG 330
           +Y+ +R+YR+PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249

Query: 331 MPPGYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGR 388
            P    L+     K   Y   L              K ++P ++            P   
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLP------------HKNKVPWNRLF----------PN-- 285

Query: 389 RRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                  S A      DL+ +MLT++P KRI     L H + 
Sbjct: 286 -----ADSKA-----LDLLDKMLTFNPHKRIEVEQALAHPYL 317

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  175 bits (445), Expect = 2e-51
 Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 51/330 (15%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-EVQLLEKINKADI 168
           D Y++   LG+G + +V +A +     +V +KI+   KP   +    E+++LE +     
Sbjct: 36  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL---KPVKKKKIKREIKILENLR---- 88

Query: 169 HSRYIVKLKG--HFTWKNHLCLVFE-LLSYNLYNLIRN-TNFHGVSLNLTKKFAQQLCCA 224
               I+ L             LVFE + + +   L +  T++        + +  ++  A
Sbjct: 89  GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD------IRFYMYEILKA 142

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--SSCHVGQTLYQYIQSRYYRSP 282
           L +  S  + I+H D+KP N+++   +   +++ID+G     H GQ     + SRY++ P
Sbjct: 143 LDYCHS--MGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199

Query: 283 EVLLGIP-YDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           E+L+    YD ++DMWSLGC+L  +    EP F G +  DQ+ +I +VLG          
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE-------- 251

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
                         Y+        K  +    R + ILG  +     R  +     L   
Sbjct: 252 ----------DLYDYI-------DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS- 293

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            +  D + ++L YD + R++    + H +F
Sbjct: 294 PEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  170 bits (434), Expect = 2e-49
 Identities = 85/350 (24%), Positives = 138/350 (39%), Gaps = 78/350 (22%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKI 163
           + +YE    +G+G+FG+V KA   +   +VA+K +  +      P    A  E+++L+ +
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI--TALREIKILQLL 73

Query: 164 NKADIHSRYIVKLKG--------HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
                H   +V L          +   K  + LVF+   ++L  L+ N      +L+  K
Sbjct: 74  K----H-ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIK 127

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG----SSCHVGQTLY 271
           +  Q L   L ++      I+H D+K  N+L+   +   +K+ DFG     S        
Sbjct: 128 RVMQMLLNGLYYIHR--NKILHRDMKAANVLI--TRDGVLKLADFGLARAFSLAKNSQPN 183

Query: 272 QYIQ---SRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +Y     + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I +
Sbjct: 184 RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243

Query: 328 VLGMP-----PGYLLHGASKTSKYFDRLSD-NSYVLKKSTDTR-KERLPGSKRLDTILGV 380
           + G       P              D         L K    + K+RL            
Sbjct: 244 LCGSITPEVWPN------------VDNYELYEKLELVKGQKRKVKDRLKA-------YVR 284

Query: 381 DNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           D                       DLI ++L  DP +RI   + L H+FF
Sbjct: 285 DPYA-------------------LDLIDKLLVLDPAQRIDSDDALNHDFF 315

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  169 bits (430), Expect = 2e-48
 Identities = 87/375 (23%), Positives = 155/375 (41%), Gaps = 76/375 (20%)

Query: 94  DDENYDYIIK---HGEKFLDRYEIDTL-LGKGSFGQVVKAFDHEEKCQ--VAIKIIKNKK 147
           D  +YD+ +K     E+  D +E +   +G+G++G V KA   + K     A+K I+   
Sbjct: 1   DKMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE-GT 59

Query: 148 PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NHLCLVFELLSYNLYNLIR--- 202
                A  E+ LL ++     H   ++ L+  F       + L+F+   ++L+++I+   
Sbjct: 60  GISMSACREIALLRELK----H-PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHR 114

Query: 203 ----NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIK 256
               N     +   + K    Q+   + +L +    ++H DLKP NIL+    P+R  +K
Sbjct: 115 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVK 172

Query: 257 IIDFGSSCHVGQTLYQYIQSRY------YRSPEVLLGIP-YDLAIDMWSLGCILVELHTG 309
           I D G +      L              YR+PE+LLG   Y  AID+W++GCI  EL T 
Sbjct: 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232

Query: 310 EPLFSGKNEV---------DQMTKIIEVLGMP-----PGYLLHGASKTSKYFDRLSDNSY 355
           EP+F  + E          DQ+ +I  V+G P                     ++ ++S 
Sbjct: 233 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED------------IKKMPEHST 280

Query: 356 VLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP 415
           ++K             K +               +++       +     L+ ++LT DP
Sbjct: 281 LMKDFRRNTYTNCSLIKYM--------------EKHKVKPDSKAF----HLLQKLLTMDP 322

Query: 416 KKRISPTNVLRHEFF 430
            KRI+    ++  +F
Sbjct: 323 IKRITSEQAMQDPYF 337

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  171 bits (435), Expect = 8e-48
 Identities = 71/376 (18%), Positives = 137/376 (36%), Gaps = 86/376 (22%)

Query: 66  KKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYD-----YIIKHGEKFLDRYEIDTLLGK 120
           K++R   +         K     + D +  + +       +    +  LD Y+I   LG 
Sbjct: 108 KRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGT 167

Query: 121 GSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRYIVKLKG 178
           G+FG V +  +       A K +       ++  +  E+Q +  +     H   +V L  
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLR----HPT-LVNLHD 221

Query: 179 HFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKK----FAQQLCCALAFLSSPEL 233
            F   N + +++E +S   L+  + + +       +++     + +Q+C  L  +     
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNK-----MSEDEAVEYMRQVCKGLCHMHE--N 274

Query: 234 SIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYD 291
           + +H DLKPENI+  + + + +K+IDFG + H+   Q++     +  + +PEV  G P  
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
              DMWS+G +   L +G   F G+N+ + +     V                  F  +S
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRN---VKSCDWNM-------DDSAFSGIS 384

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
           ++                                                  KD I ++L
Sbjct: 385 EDG-------------------------------------------------KDFIRKLL 395

Query: 412 TYDPKKRISPTNVLRH 427
             DP  R++    L H
Sbjct: 396 LADPNTRMTIHQALEH 411

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  164 bits (418), Expect = 2e-47
 Identities = 70/329 (21%), Positives = 120/329 (36%), Gaps = 78/329 (23%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           ++  ++Y I   LG+G FG V +  +   K     K +K K       + E+ +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLT----KKFAQQ 220
              H   I+ L   F     L ++FE +S  +++  I  + F      L       +  Q
Sbjct: 60  ---HRN-ILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-----LNEREIVSYVHQ 110

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRY 278
           +C AL FL S   +I H D++PENI+  + + S IKII+FG +  +  G        +  
Sbjct: 111 VCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE 168

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           Y +PEV        A DMWSLG ++  L +G   F  +     +     ++     +   
Sbjct: 169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN---IMNAEYTF--- 222

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
                 + F  +S  +                                            
Sbjct: 223 ----DEEAFKEISIEA-------------------------------------------- 234

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRH 427
                 D + R+L  + K R++ +  L+H
Sbjct: 235 -----MDFVDRLLVKERKSRMTASEALQH 258

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  161 bits (409), Expect = 3e-46
 Identities = 57/231 (24%), Positives = 89/231 (38%), Gaps = 11/231 (4%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE-KINKA 166
           F   ++  + LG GS+G+V K    E+    A+K      PF        +L E   ++ 
Sbjct: 55  FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS--MSPFRGPKDRARKLAEVGSHEK 112

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
                  V+L+  +     L L  EL   +L           +       + +    ALA
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALA 171

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ--SRYYRSPEV 284
            L S    ++H D+KP NI L    R   K+ DFG    +G      +Q     Y +PE+
Sbjct: 172 HLHS--QGLVHLDVKPANIFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           L G  Y  A D++SLG  ++E+     L  G     Q+ +         G 
Sbjct: 228 LQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGL 277

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  164 bits (417), Expect = 4e-46
 Identities = 98/445 (22%), Positives = 153/445 (34%), Gaps = 133/445 (29%)

Query: 67  KKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKF--LDRYEIDTLLGKGSFG 124
             ++       T S  +++       H  +    + +    +   DRYEI  L+G GS+G
Sbjct: 8   AAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYG 67

Query: 125 QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKADIHSRYIVKLK-- 177
            V +A+D  EK  VAIK I     F +         E+ +L ++N    H  ++VK+   
Sbjct: 68  HVCEAYDKLEKRVVAIKKILR--VFEDLIDCKRILREIAILNRLN----H-DHVVKVLDI 120

Query: 178 ---GHFTWKNHLCLVFELLSYNLYNLIRN----TNFHGVSLNLTKKFAQQLCCALAFLSS 230
                    + L +V E+   +   L R     T  H       K     L   + ++ S
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH------IKTLLYNLLVGVKYVHS 174

Query: 231 PELSIIHCDLKPENILL---CSPKRSAIKIIDFG-------------------------- 261
               I+H DLKP N L+   CS     +K+ DFG                          
Sbjct: 175 AG--ILHRDLKPANCLVNQDCS-----VKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227

Query: 262 ----SSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHT-------- 308
                + ++ + L  ++ +R+YR+PE++L    Y  AID+WS+GCI  EL          
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287

Query: 309 ---GEPLFSGKN--------------------EVDQMTKIIEVLGMPPGYLLHGASKTSK 345
                PLF G +                      DQ+  I  +LG P             
Sbjct: 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS------------ 335

Query: 346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD 405
                 D   + K+         P  +  D                              
Sbjct: 336 ----EEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAI----------------H 375

Query: 406 LILRMLTYDPKKRISPTNVLRHEFF 430
           L+ RML ++P KRI+    L H FF
Sbjct: 376 LLKRMLVFNPNKRITINECLAHPFF 400

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  163 bits (415), Expect = 5e-46
 Identities = 90/418 (21%), Positives = 147/418 (35%), Gaps = 131/418 (31%)

Query: 89  HNDGHDDENYDYIIKHGEKF--LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK 146
           H+  H     +   +  +     D Y I  L+G+GS+G V  A+D   +  VAIK +   
Sbjct: 3   HHHHHSSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR- 61

Query: 147 KPFLNQAQI-----EVQLLEKINKADIHSRYIVKLK-----GHFTWKNHLCLVFELLSYN 196
             F +         E+ +L ++        YI++L            + L +V E+   +
Sbjct: 62  -MFEDLIDCKRILREITILNRLK----S-DYIIRLYDLIIPDDLLKFDELYIVLEIADSD 115

Query: 197 LYNLIRNTNFHGVSLNLTKKFAQ----QLCCALAFLSSPELSIIHCDLKPENILL---CS 249
           L  L +   F      LT++  +     L     F+      IIH DLKP N LL   CS
Sbjct: 116 LKKLFKTPIF------LTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCS 167

Query: 250 PKRSAIKIIDFG-------------------------SSCHVGQTLYQYIQSRYYRSPEV 284
                +K+ DFG                          + ++ + L  ++ +R+YR+PE+
Sbjct: 168 -----VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 222

Query: 285 LLGIP-YDLAIDMWSLGCILVELHTG-----------EPLFSG----------------- 315
           +L    Y  +ID+WS GCI  EL               PLF G                 
Sbjct: 223 ILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHE 282

Query: 316 KNEVDQMTKIIEVLGMPPGYLLH--GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKR 373
           K+  DQ+  I  ++G P    L      +  KY                  ++ +   ++
Sbjct: 283 KSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP------------HRKPINLKQK 330

Query: 374 LDTILGVDNGGPGGRRRNEPGHS-LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                              P  S         +L+  ML ++P KRI+    L H + 
Sbjct: 331 Y------------------PSISDDG-----INLLESMLKFNPNKRITIDQALDHPYL 365

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  161 bits (408), Expect = 5e-45
 Identities = 67/332 (20%), Positives = 112/332 (33%), Gaps = 81/332 (24%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
            +    +LG G+ G +V     + +  VA+K I       + A  EVQLL +    D H 
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNR-DVAVKRIL--PECFSFADREVQLLRES---DEHP 78

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
             +++       +    +  EL +  L   +   +F  + L       QQ    LA L S
Sbjct: 79  -NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHS 136

Query: 231 PELSIIHCDLKPENILLCSPKRSA---IKIIDFGSSCHVGQ------TLYQYIQSRYYRS 281
             L+I+H DLKP NIL+  P         I DFG    +               +  + +
Sbjct: 137 --LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194

Query: 282 PEVLLGIP---YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           PE+L           +D++S GC+   + +                     G  P     
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISE--------------------GSHP----- 229

Query: 339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA 398
                  +   L   + +L  +           + +                        
Sbjct: 230 -------FGKSLQRQANILLGACSLDCLHPEKHEDVI----------------------- 259

Query: 399 DYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                ++LI +M+  DP+KR S  +VL+H FF
Sbjct: 260 ----ARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  153 bits (389), Expect = 2e-43
 Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 31/259 (11%)

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KN 145
           H+ G D    +   +        Y I   +G G   +V +   +E+K   AIK +   + 
Sbjct: 7   HSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEA 65

Query: 146 KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTN 205
               L+  + E+  L K+ +   HS  I++L  +     ++ +V E  + +L + ++   
Sbjct: 66  DNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-- 120

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
              +     K + + +  A+  +      I+H DLKP N L+       +K+IDFG +  
Sbjct: 121 KKSIDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLI---VDGMLKLIDFGIANQ 175

Query: 266 V-----GQTLYQYIQSRYYRSPEVLLGIP-----------YDLAIDMWSLGCILVELHTG 309
           +            + +  Y  PE +  +                 D+WSLGCIL  +  G
Sbjct: 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235

Query: 310 EPLFSG-KNEVDQMTKIIE 327
           +  F    N++ ++  II+
Sbjct: 236 KTPFQQIINQISKLHAIID 254

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
            +D++   L  DPK+RIS   +L H +    + 
Sbjct: 269 LQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  154 bits (390), Expect = 3e-43
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 18/229 (7%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKI 163
           + +++Y     +G+GSFG+ +     E+  Q  IK I   +       +++ EV +L   
Sbjct: 21  QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL--- 77

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
             A++    IV+ +  F     L +V +     +L+  I          +    +  Q+C
Sbjct: 78  --ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR----Y 278
            AL  +      I+H D+K +NI L   K   +++ DFG +  +  T+ +  ++     Y
Sbjct: 136 LALKHVHDR--KILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTV-ELARACIGTPY 190

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Y SPE+    PY+   D+W+LGC+L EL T +  F   +  + + KII 
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  157 bits (398), Expect = 4e-43
 Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 18/262 (6%)

Query: 73  LSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDH 132
           + H+   S+ +E  Y   D        +I        + Y+    LG G++G+V+   D 
Sbjct: 1   MHHHHHHSSGRENLYFQGDLQATPG-MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDK 59

Query: 133 EEKCQVAIKII-KNKKPFLNQAQI--EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV 189
               + AIKII K      + +++  EV +L+ ++    H   I+KL   F  K +  LV
Sbjct: 60  VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD----HP-NIMKLYDFFEDKRNYYLV 114

Query: 190 FELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC 248
            E      L++ I +      +        +Q+   + +L     +I+H DLKPEN+LL 
Sbjct: 115 MECYKGGELFDEIIHRMKF--NEVDAAVIIKQVLSGVTYLHK--HNIVHRDLKPENLLLE 170

Query: 249 SPK-RSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVE 305
           S +  + IKI+DFG S      + + + + + YY +PEVL    YD   D+WS+G IL  
Sbjct: 171 SKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFI 229

Query: 306 LHTGEPLFSGKNEVDQMTKIIE 327
           L  G P F G+ + + + K+ +
Sbjct: 230 LLAGYPPFGGQTDQEILRKVEK 251

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           KDLI +ML +D ++RIS    L H +  +   
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  152 bits (387), Expect = 5e-43
 Identities = 62/346 (17%), Positives = 111/346 (32%), Gaps = 67/346 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKAD 167
             + +  +LG+G+   V +    +     AIK+  N            E ++L+K+N   
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN--- 65

Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSY-NLYN-LIRNTNFHGVSLNLTKKFAQQLCC 223
            H + IVKL      T   H  L+ E     +LY  L   +N +G+  +      + +  
Sbjct: 66  -H-KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            +  L      I+H ++KP NI+    +  +S  K+ DFG++  +   +       +  Y
Sbjct: 124 GMNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181

Query: 280 RSPEVLLGI--------PYDLAIDMWSLGCILVELHTGEPLF----SGKNEVDQMTKIIE 327
             P++             Y   +D+WS+G       TG   F      +   + M KII 
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
             G P G +       +   D   D       S   +                       
Sbjct: 242 --GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL--------------------- 278

Query: 388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                             ++  +L  D +K             + H
Sbjct: 279 ---------------LTPVLANILEADQEKCWGFDQFFAETSDILH 309

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  151 bits (384), Expect = 9e-43
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 21/235 (8%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLL 160
           G   L  + I+  +G+G F +V +A    +   VA+K ++               E+ LL
Sbjct: 27  GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSL--NLTKKF 217
           +++N        ++K    F   N L +V EL    +L  +I++       +      K+
Sbjct: 87  KQLN-----HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---LYQYI 274
             QLC AL  + S    ++H D+KP N+ +       +K+ D G            +  +
Sbjct: 142 FVQLCSALEHMHS--RRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLV 197

Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK--NEVDQMTKIIE 327
            + YY SPE +    Y+   D+WSLGC+L E+   +  F G   N      KI +
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  150 bits (382), Expect = 9e-43
 Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 23/237 (9%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEK 162
               + YE+   +G GS+G+  K     +   +  K +               EV LL  
Sbjct: 2   PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL-- 59

Query: 163 INKADIHSRYIVKLKGHFTWK--NHLCLVFELLS-YNLYNLIRNTNFHGVSL--NLTKKF 217
               ++    IV+       +    L +V E     +L ++I         L      + 
Sbjct: 60  ---RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116

Query: 218 AQQLCCALAFL---SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
             QL  AL      S    +++H DLKP N+ L    +  +K+ DFG +  +      + 
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNHDT-SFA 173

Query: 275 QSR----YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           ++     YY SPE +  + Y+   D+WSLGC+L EL    P F+  ++ +   KI E
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  152 bits (386), Expect = 3e-42
 Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 35/278 (12%)

Query: 73  LSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEK-------------FLDRYEIDTLLG 119
           +  +    +   K     DG    +YD   +   K               D Y+I   LG
Sbjct: 1   MRGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELG 60

Query: 120 KGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRYIVKLK 177
            G+FG V +  +         K I      L++  +  E+ ++ +++    H + ++ L 
Sbjct: 61  SGAFGVVHRCVEKATGRVFVAKFIN-TPYPLDKYTVKNEISIMNQLH----HPK-LINLH 114

Query: 178 GHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKK----FAQQLCCALAFLSSPE 232
             F  K  + L+ E LS   L++ I   ++      +++     + +Q C  L  +    
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYK-----MSEAEVINYMRQACEGLKHMHE-- 167

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPY 290
            SI+H D+KPENI+  + K S++KIIDFG +  +   + +     +  + +PE++   P 
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
               DMW++G +   L +G   F+G+++++ +  +   
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 265

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRH 427
           KD I  +L  +P+KR++  + L H
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEH 305

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  153 bits (389), Expect = 8e-42
 Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 20/266 (7%)

Query: 76  NETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK 135
           +    +   ++ ++  G       Y+ K   K  + Y     LG G++G+V+   +    
Sbjct: 2   HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61

Query: 136 CQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS----------RYIVKLKGHFTWKNH 185
            + AIK+I  K  F      +     +    +I++            I+KL   F  K +
Sbjct: 62  SEKAIKVI-KKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120

Query: 186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
             LV E      L+  I N +             +Q+   + +L     +I+H D+KPEN
Sbjct: 121 FYLVTEFYEGGELFEQIINRHKF--DECDAANIMKQILSGICYLHK--HNIVHRDIKPEN 176

Query: 245 ILLCSPK-RSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGC 301
           ILL +      IKI+DFG S        L   + + YY +PEVL    Y+   D+WS G 
Sbjct: 177 ILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGV 235

Query: 302 ILVELHTGEPLFSGKNEVDQMTKIIE 327
           I+  L  G P F G+N+ D + K+ +
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEK 261

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD 436
           K+LI  MLTYD  KR +    L   +  K++ +
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  149 bits (379), Expect = 1e-41
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 31/237 (13%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINKAD 167
            Y I   +G G   +V +   +E+K   AIK +   +     L+  + E+  L K+ +  
Sbjct: 10  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-- 66

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            HS  I++L  +     ++ +V E  + +L + ++      +     K + + +  A+  
Sbjct: 67  -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 123

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-----GQTLYQYIQSRYYRSP 282
           +   +  I+H DLKP N L+       +K+IDFG +  +            + +  Y  P
Sbjct: 124 IH--QHGIVHSDLKPANFLI---VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178

Query: 283 EVLLGIP-----------YDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIE 327
           E +  +                 D+WSLGCIL  +  G+  F    N++ ++  II+
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
            +D++   L  DPK+RIS   +L H +    +
Sbjct: 250 LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  148 bits (375), Expect = 2e-41
 Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 44/273 (16%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA 166
           ++   +E   +LG+G+FGQVVKA +  +    AIK I++ +  L+    EV LL  +N  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN-- 60

Query: 167 DIHSRYIVKLKGHFTWKNH-------------LCLVFELLSYN-LYNLIRNTNFHGVSLN 212
               +Y+V+    +  + +             L +  E      LY+LI + N +    +
Sbjct: 61  ---HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN-QQRD 116

Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
              +  +Q+  AL+++ S    IIH DLKP NI +   +   +KI DFG + +V ++L  
Sbjct: 117 EYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFID--ESRNVKIGDFGLAKNVHRSLDI 172

Query: 273 YIQSR-----------------YYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFS 314
                                  Y + EVL G   Y+  IDM+SLG I  E+    P  +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFST 230

Query: 315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF 347
           G   V+ + K+  V    P        K  K  
Sbjct: 231 GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI 263

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 7/28 (25%), Positives = 13/28 (46%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            K +I  ++ +DP KR     +L   + 
Sbjct: 260 EKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  152 bits (385), Expect = 3e-41
 Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 20/237 (8%)

Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---- 155
           ++      F DRY+   +LGKGSFG+V+   D     + A+K+I +K+    +       
Sbjct: 16  FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLL 74

Query: 156 -EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNL 213
            EVQLL++++    H   I+KL   F  K +  LV E+ +   L++ I +      S   
Sbjct: 75  REVQLLKQLD----HP-NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVD 127

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV--GQTL 270
             +  +Q+   + ++      I+H DLKPEN+LL S  K + I+IIDFG S H    + +
Sbjct: 128 AARIIRQVLSGITYMHK--NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185

Query: 271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
              I + YY +PEVL G  YD   D+WS G IL  L +G P F+G NE D + K+ +
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 241

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KDLI +MLTY P  RIS  + L HE+   ++ + 
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 292

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  147 bits (374), Expect = 3e-41
 Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 17/227 (7%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
                 +    +LG G+F +V            A+K IK K P    + +  E+ +L+KI
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSSLENEIAVLKKI 63

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI-RNTNFHGVSLNLTKKFAQQL 221
                H   IV L+  +    H  LV +L+S   L++ I     +   +        QQ+
Sbjct: 64  K----H-ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY---TEKDASLVIQQV 115

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFG-SSCHVGQTLYQYIQSRYY 279
             A+ +L      I+H DLKPEN+L  +P+  S I I DFG S       +     +  Y
Sbjct: 116 LSAVKYLHE--NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY 173

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
            +PEVL   PY  A+D WS+G I   L  G P F  + E     KI 
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRH 427
           KD I  +L  DP +R +    L H
Sbjct: 239 KDFICHLLEKDPNERYTCEKALSH 262

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  148 bits (375), Expect = 3e-41
 Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 18/238 (7%)

Query: 101 IIKHGEKFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---- 155
             +  E F + Y +    LG+G F  V +        + A K +K ++    Q       
Sbjct: 19  YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR--RGQDCRAEIL 76

Query: 156 -EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
            E+ +LE           ++ L   +   + + L+ E  +   +++L        VS N 
Sbjct: 77  HEIAVLELAK----SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND 132

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV--GQTL 270
             +  +Q+   + +L     +I+H DLKP+NILL S      IKI+DFG S  +     L
Sbjct: 133 VIRLIKQILEGVYYLHQ--NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190

Query: 271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            + + +  Y +PE+L   P   A DMW++G I   L T    F G++  +    I +V
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
            D I  +L  +P+KR +    L H +  +   +N
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN 298

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  145 bits (369), Expect = 8e-41
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLEK 162
            KF D Y++   LGKG+F  V +        + A KII  KK      Q    E ++  K
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI-RNTNFHGVSLNLTKKFAQQ 220
           +     H   IV+L      ++   LVF+L++   L+  I     +   S        QQ
Sbjct: 62  LQ----H-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQ 113

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV--GQTLYQYIQSR 277
           +  ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  + +  + 
Sbjct: 114 ILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            Y SPEVL   PY   +D+W+ G IL  L  G P F  +++     +I  
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 221

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           K LI  MLT +PKKRI+    L+  +     
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWICNRE 269

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  147 bits (374), Expect = 8e-41
 Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 18/237 (7%)

Query: 99  DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--- 155
           ++++    KF D Y++   LGKG+F  V +        + A KII  KK      Q    
Sbjct: 18  EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77

Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI-RNTNFHGVSLNL 213
           E ++  K+     H   IV+L      ++   LVF+L++   L+  I     +   S   
Sbjct: 78  EARICRKLQ----H-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY---SEAD 129

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV--GQTL 270
                QQ+  ++A+  S    I+H +LKPEN+LL S  K +A+K+ DFG +  V   +  
Sbjct: 130 ASHCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187

Query: 271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           + +  +  Y SPEVL   PY   +D+W+ G IL  L  G P F  +++     +I  
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 244

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           K LI  MLT +PKKRI+    L+  +      
Sbjct: 262 KSLIDSMLTVNPKKRITADQALKVPWICNRER 293

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  145 bits (368), Expect = 1e-40
 Identities = 56/250 (22%), Positives = 92/250 (36%), Gaps = 36/250 (14%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           ++F   ++   L+G G FGQV KA    +     IK +K       +A+ EV+ L     
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKAL----- 58

Query: 166 ADIHSRYIVKLKGHF----------------TWKNHLCLVFELLS-YNLYNLIRNTNFHG 208
           A +    IV   G +                +    L +  E      L   I       
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
           +   L  +  +Q+   + ++ S    +I+ DLKP NI L       +KI DFG    +  
Sbjct: 119 LDKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFLV--DTKQVKIGDFGLVTSLKN 174

Query: 269 T--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVEL-HTGEPLFSGKNEVDQMTKI 325
                +   +  Y SPE +    Y   +D+++LG IL EL H  +  F        +   
Sbjct: 175 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234

Query: 326 IEVLGMPPGY 335
           I    +   +
Sbjct: 235 I----ISDIF 240

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  148 bits (374), Expect = 1e-40
 Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 31/236 (13%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKINKAD 167
            Y I   +G G   +V +   +E+K   AIK +   +     L+  + E+  L K+ +  
Sbjct: 57  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-- 113

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            HS  I++L  +     ++ +V E  + +L + ++      +     K + + +  A+  
Sbjct: 114 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 170

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-----GQTLYQYIQSRYYRSP 282
           +   +  I+H DLKP N L+       +K+IDFG +  +            + +  Y  P
Sbjct: 171 IH--QHGIVHSDLKPANFLI---VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225

Query: 283 EVLLGIP-----------YDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKII 326
           E +  +                 D+WSLGCIL  +  G+  F    N++ ++  II
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 281

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
            +D++   L  DPK+RIS   +L H +    +
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  149 bits (378), Expect = 2e-40
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 21/244 (8%)

Query: 93  HDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
           H   +    +     F +RY I  +LGKGSFG+V+K  D   + + A+K+I         
Sbjct: 5   HHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS--AKN 62

Query: 153 AQI-----EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNF 206
                   EV+LL+K++    H   I+KL       +   +V EL +   L++ I     
Sbjct: 63  KDTSTILREVELLKKLD----HP-NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR 117

Query: 207 HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFGSSCH 265
              S +   +  +Q+   + ++     +I+H DLKPENILL S +    IKIIDFG S  
Sbjct: 118 F--SEHDAARIIKQVFSGITYMHK--HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173

Query: 266 V--GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT 323
                 +   I + YY +PEVL G  YD   D+WS G IL  L +G P F GKNE D + 
Sbjct: 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232

Query: 324 KIIE 327
           ++  
Sbjct: 233 RVET 236

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KDLI +MLT+ P  RI+ T  L H +  K+S + 
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET 287

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  150 bits (381), Expect = 5e-40
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 59/338 (17%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
            +    +E+   LG G FG V++    +   QVAIK  + +    N+ +   E+Q+++K+
Sbjct: 10  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69

Query: 164 NKADIHSRYIVKL------KGHFTWKNHLCLVFELLS-YNLYNLI-RNTNFHGVSLNLTK 215
           N    H   +V               +   L  E     +L   + +  N  G+     +
Sbjct: 70  N----H-PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQ 272
                +  AL +L   E  IIH DLKPENI+L   P+R   KIID G +  +  G+   +
Sbjct: 125 TLLSDISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
           ++ +  Y +PE+L    Y + +D WS G +  E  TG   F    +  Q    +      
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR----- 237

Query: 333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE 392
                    K++++     D +  +K S+      LP    L  IL              
Sbjct: 238 --------EKSNEHIVVYDDLTGAVKFSSV-----LPTPNHLSGILA------------- 271

Query: 393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                    K +  +  ML +  ++R +         F
Sbjct: 272 --------GKLERWLQCMLMWHQRQRGTDPQNPNVGCF 301

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  143 bits (364), Expect = 5e-40
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 22/249 (8%)

Query: 88  VHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK 147
           +H+  H     + +   G  F +RY I  +LGKGSFG+V+K  D   + + A+K+I    
Sbjct: 1   MHHHHHHSSGRENLYFQGT-FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS 59

Query: 148 PFLNQAQI-----EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI 201
                        EV+LL+K++    H   I+KL       +   +V EL +   L++ I
Sbjct: 60  --AKNKDTSTILREVELLKKLD----H-PNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112

Query: 202 RNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDF 260
                   S +   +  +Q+   + ++     +I+H DLKPENILL S ++   IKIIDF
Sbjct: 113 IKRKRF--SEHDAARIIKQVFSGITYMHK--HNIVHRDLKPENILLESKEKDCDIKIIDF 168

Query: 261 GSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
           G S        +   I + YY +PEVL G  YD   D+WS G IL  L +G P F GKNE
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE 227

Query: 319 VDQMTKIIE 327
            D + ++  
Sbjct: 228 YDILKRVET 236

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           KDLI +MLT+ P  RI+ T  L H +  K+S
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  144 bits (366), Expect = 7e-40
 Identities = 64/293 (21%), Positives = 110/293 (37%), Gaps = 61/293 (20%)

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP 148
           H+     EN  +      +   +Y +   +G+GS+G V  A +++ +   AIKI+   K 
Sbjct: 5   HHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI 64

Query: 149 FLNQAQI------EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-------- 194
                +       EV+L++K++        I +L   +  + ++CLV EL          
Sbjct: 65  RQINPKDVERIKTEVRLMKKLH-----HPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119

Query: 195 ---------------------------YNLYNLIRNTNFHGVSLNLTKKFA----QQLCC 223
                                          N   +     +     +K      +Q+  
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-------GQTLYQYIQS 276
           AL +L +    I H D+KPEN L  + K   IK++DFG S             +     +
Sbjct: 180 ALHYLHN--QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237

Query: 277 RYYRSPEVLLGI--PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            Y+ +PEVL      Y    D WS G +L  L  G   F G N+ D +++++ 
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 7/31 (22%), Positives = 15/31 (48%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           +DL+  +L  +  +R      L+H +  + S
Sbjct: 308 RDLLSNLLNRNVDERFDAMRALQHPWISQFS 338

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  144 bits (365), Expect = 8e-40
 Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 21/235 (8%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQ 158
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +       EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           +L ++     H   ++ L   +  +  + L+ EL+S   L++ +        S      F
Sbjct: 68  ILRQVL----HHN-VITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATSF 120

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKIIDFGSSCHV--GQTLYQY 273
            +Q+   + +L +    I H DLKPENI+L         IK+IDFG +  +  G      
Sbjct: 121 IKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             +  + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
           KD I ++L  + +KR++    LRH + 
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWI 276

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  142 bits (360), Expect = 2e-39
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 21/233 (9%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQLL 160
             D YE+   LG G F  V K        + A K IK ++   ++  +       EV +L
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQ 219
            +I     H   I+ L   F  K  + L+ EL+S   L++ +        + +   +F +
Sbjct: 63  REIR----HPN-IITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--TEDEATQFLK 115

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKIIDFGSSCHV--GQTLYQYIQ 275
           Q+   + +L S    I H DLKPENI+L         IK+IDFG +  +  G        
Sbjct: 116 QILDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
           +  + +PE++   P  L  DMWS+G I   L +G   F G+ + + +T I  V
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRH 427
           KD I R+L  DPK+R++    L H
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEH 266

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  144 bits (365), Expect = 2e-39
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 21/235 (8%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQ 158
           +K  D Y+I   LG G F  V K  +     + A K IK ++   ++  +       EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           +L ++     H   I+ L   +  +  + L+ EL+S   L++ +        S      F
Sbjct: 68  ILRQVL----H-PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATSF 120

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSP--KRSAIKIIDFGSSCHV--GQTLYQY 273
            +Q+   + +L +    I H DLKPENI+L         IK+IDFG +  +  G      
Sbjct: 121 IKQILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             +  + +PE++   P  L  DMWS+G I   L +G   F G  + + +  I  V
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KD I ++L  + +KR++    LRH +        
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQ 283

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  143 bits (362), Expect = 2e-39
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 21/235 (8%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQ 158
           E   D Y+    LG G F  V K  +     Q A K IK ++   ++  +       EV 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKF 217
           +L++I     H   ++ L   +  K  + L+ EL++   L++ +        +     +F
Sbjct: 67  ILKEIQ----HPN-VITLHEVYENKTDVILILELVAGGELFDFLAEKESL--TEEEATEF 119

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKIIDFGSSCHV--GQTLYQY 273
            +Q+   + +L S  L I H DLKPENI+L         IKIIDFG +  +  G      
Sbjct: 120 LKQILNGVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
             +  + +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRH 427
           KD I R+L  DPKKR++  + L+H
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQH 272

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  143 bits (362), Expect = 4e-39
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------EVQL 159
            F D YE+  ++GKG F  V +  + E   Q A+KI+ +   F +   +       E  +
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASI 79

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI--RNTNFHGVSLNLTKK 216
              +     H  +IV+L   ++    L +VFE +   +L   I  R       S  +   
Sbjct: 80  CHMLK----H-PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHV---GQTLYQ 272
           + +Q+  AL +      +IIH D+KP  +LL S + SA +K+  FG +  +   G     
Sbjct: 135 YMRQILEALRYCHD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            + + ++ +PEV+   PY   +D+W  G IL  L +G   F G  E
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
           KDL+ RML  DP +RI+    L H + 
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWL 290

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  144 bits (364), Expect = 4e-39
 Identities = 62/346 (17%), Positives = 109/346 (31%), Gaps = 67/346 (19%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKAD 167
             + +  +LG+G+   V +    +     AIK+  N            E ++L+K+N   
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN--- 65

Query: 168 IHSRYIVKLKGHF--TWKNHLCLVFELLSY-NLYN-LIRNTNFHGVSLNLTKKFAQQLCC 223
            H   IVKL      T   H  L+ E     +LY  L   +N +G+  +      + +  
Sbjct: 66  -HK-NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSP--KRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            +  L      I+H ++KP NI+       +S  K+ DFG++  +   +       +  Y
Sbjct: 124 GMNHLRE--NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181

Query: 280 RSPEVLLGI--------PYDLAIDMWSLGCILVELHTGEPLF----SGKNEVDQMTKIIE 327
             P++             Y   +D+WS+G       TG   F      +   + M KII 
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
             G P G +       +   D   D       S   +                       
Sbjct: 242 --GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL--------------------- 278

Query: 388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                             ++  +L  D +K             + H
Sbjct: 279 ---------------LTPVLANILEADQEKCWGFDQFFAETSDILH 309

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  144 bits (365), Expect = 5e-39
 Identities = 80/286 (27%), Positives = 127/286 (44%), Gaps = 31/286 (10%)

Query: 58  HINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTL 117
            +N     K KR+  L++N   +    +  V      D   D    + +   D Y +   
Sbjct: 86  FVNTELVGKGKRR-PLNNNSEIALSLSRNKVFV--FFDLTVDDQSVYPKALRDEYIMSKT 142

Query: 118 LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI----------EVQLLEKINKAD 167
           LG G+ G+V  AF+ +   +VAI+II +K+ F   +            E+++L+K+N   
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKKLN--- 198

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   I+K+K  F       +V EL+    L++ +       +     K +  Q+  A+ 
Sbjct: 199 -H-PCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQ 253

Query: 227 FLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPE 283
           +L      IIH DLKPEN+LL S  +   IKI DFG S  +     +     +  Y +PE
Sbjct: 254 YLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311

Query: 284 VLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           VL+ +    Y+ A+D WSLG IL    +G P FS       +   I
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
            DL+ ++L  DPK R +    LRH +     +  
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  140 bits (356), Expect = 7e-39
 Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 16/230 (6%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
               D +     LG G+FG V    +     +  IK I   +  +   QI  E+++L+ +
Sbjct: 18  GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL 77

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLN--LTKKFAQQ 220
           +    H   I+K+   F   +++ +V E      L   I +    G +L+     +  +Q
Sbjct: 78  D----H-PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV--GQTLYQYIQSR 277
           +  ALA+  S    ++H DLKPENIL       S IKIIDFG +      +       + 
Sbjct: 133 MMNALAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            Y +PEV          D+WS G ++  L TG   F+G +  +   K   
Sbjct: 191 LYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
            DL+ +MLT DP++R S   VL HE+F
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  140 bits (356), Expect = 7e-39
 Identities = 45/244 (18%), Positives = 86/244 (35%), Gaps = 35/244 (14%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKI 163
           ++   +     +G G FG V K     + C  AIK  K           A  EV     +
Sbjct: 8   RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSL--NLTKKFAQQ 220
                   ++V+    +   +H+ +  E  +  +L + I               K    Q
Sbjct: 68  G----QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLC-----------------SPKRSAIKIIDFGSS 263
           +   L ++ S  +S++H D+KP NI +                  +  +   KI D G  
Sbjct: 124 VGRGLRYIHS--MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-- 179

Query: 264 CHVGQTLYQYIQ--SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
            HV +     ++     + + EVL     +    D+++L   +V     EPL    ++  
Sbjct: 180 -HVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH 238

Query: 321 QMTK 324
           ++ +
Sbjct: 239 EIRQ 242

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  142 bits (361), Expect = 9e-39
 Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 23/277 (8%)

Query: 65  TKKKRKAQLSHNETRSNKKEKKYVHNDGHDDE-------NYDYIIKHGEKFLDRYEIDTL 117
              + K   S+ +       K    +    D        ++  +          Y +   
Sbjct: 35  GHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKT 94

Query: 118 --LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRYI 173
             LG G FGQV K  +     ++A KIIK  +   ++ ++  E+ ++ +++    H   +
Sbjct: 95  EILGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQLD----H-ANL 148

Query: 174 VKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE 232
           ++L   F  KN + LV E +    L++ I + +++ ++   T  F +Q+C  +  +    
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQ-- 205

Query: 233 LSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPY 290
           + I+H DLKPENIL  +     IKIIDFG +      + L     +  + +PEV+     
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265

Query: 291 DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
               DMWS+G I   L +G   F G N+ + +  I+ 
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA 302

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           K+ I ++L  +   RIS +  L+H +   H + +
Sbjct: 320 KEFISKLLIKEKSWRISASEALKHPWLSDHKLHS 353

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  143 bits (363), Expect = 1e-38
 Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 40/247 (16%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           +   +    + +LG GS G VV      +   VA+K +     F + A +E++LL +   
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML--IDFCDIALMEIKLLTES-- 65

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL-----TKKFAQQ 220
            D H   +++     T    L +  EL + NL +L+ + N    +L L          +Q
Sbjct: 66  -DDHP-NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-----------IKIIDFGSSCHVGQT 269
           +   +A L S  L IIH DLKP+NIL+ +  R             I I DFG    +   
Sbjct: 124 IASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181

Query: 270 LYQYIQ-------SRYYRSPEVLLGI-------PYDLAIDMWSLGCIL-VELHTGEPLFS 314
              +         +  +R+PE+L              +ID++S+GC+    L  G+  F 
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

Query: 315 GKNEVDQ 321
            K   + 
Sbjct: 242 DKYSRES 248

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
            DLI +M+ +DP KR +   VLRH  F
Sbjct: 273 TDLISQMIDHDPLKRPTAMKVLRHPLF 299

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  139 bits (352), Expect = 2e-38
 Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLL 160
                    Y ++  +G+GS+G+V  A     + + A K I  K    +  +   E++++
Sbjct: 2   STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI-PKYFVEDVDRFKQEIEIM 60

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFA 218
           + ++    H   I++L   F     + LV EL +       ++    F     +   +  
Sbjct: 61  KSLD----H-PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVF---RESDAARIM 112

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV--GQTLYQYIQ 275
           + +  A+A+     L++ H DLKPEN L  +    S +K+IDFG +     G+ +   + 
Sbjct: 113 KDVLSAVAYCHK--LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG 170

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           + YY SP+VL G  Y    D WS G ++  L  G P FS   + + M KI E
Sbjct: 171 TPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIRE 221

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.4 bits (111), Expect = 8e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           + LI R+LT  PK+RI+    L HE+F K    +
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  139 bits (353), Expect = 4e-38
 Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 26/234 (11%)

Query: 108 FLDRYEIDTL---LGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           F   Y++D     LG+GSF    K    +     A+KII  +       Q E+  L+   
Sbjct: 6   FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM--EANTQKEITALKLC- 62

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA----Q 219
             + H   IVKL   F  + H  LV ELL+   L+  I+           ++  A    +
Sbjct: 63  --EGH-PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH------FSETEASYIMR 113

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV---GQTLYQYIQ 275
           +L  A++ +    + ++H DLKPEN+L         IKIIDFG +       Q L     
Sbjct: 114 KLVSAVSHMHD--VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF 171

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL 329
           + +Y +PE+L    YD + D+WSLG IL  + +G+  F   +     T  +E++
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           KDLI  +LT DP KR+  + +  +E+    S 
Sbjct: 248 KDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  142 bits (360), Expect = 4e-38
 Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EVQLLE 161
             +F + Y++   LGKG+F  V +        + A  II  KK      Q    E ++  
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLI-RNTNFHGVSLNLTKKFAQ 219
            +     H   IV+L    + + H  L+F+L++   L+  I     +   S        Q
Sbjct: 66  LLK----H-PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY---SEADASHCIQ 117

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV---GQTLYQYIQ 275
           Q+  A+       + ++H +LKPEN+LL S  K +A+K+ DFG +  V    Q  + +  
Sbjct: 118 QILEAVLHCHQ--MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +  Y SPEVL   PY   +D+W+ G IL  L  G P F  +++     +I  
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA 227

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           KDLI +MLT +P KRI+    L+H +    S 
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRST 276

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  140 bits (355), Expect = 4e-38
 Identities = 37/255 (14%), Positives = 70/255 (27%), Gaps = 36/255 (14%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLLEKINKA 166
           + ++   L  G    V    D E     A+K+     +N +  L +         ++   
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 167 DIHSRY----------IVKLKGH-----------FTWKNHLCLVFELLSYNLYNLIRNTN 205
                            V ++                  +  L+    S +L  L    +
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 206 FHGV-----SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
           F  V      +        QL    A L S    ++H    P+N+ +       + + D 
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQS--KGLVHGHFTPDNLFIM--PDGRLMLGDV 238

Query: 261 GSSCHVGQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
            +   VG           Y   E L      +  A++ W LG  +  +      F     
Sbjct: 239 SALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298

Query: 319 VDQMTKIIEVLGMPP 333
             + +     L +P 
Sbjct: 299 GIKGSWKRPSLRVPG 313

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.4 bits (112), Expect = 5e-06
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           K LI R L +D ++R+ P   +    FL+
Sbjct: 330 KTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  139 bits (353), Expect = 7e-38
 Identities = 54/360 (15%), Positives = 120/360 (33%), Gaps = 73/360 (20%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           +K  +K+++ Y I   L +G F +++      +    A+K    K     +        +
Sbjct: 23  VKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKF--YALKKY-EKSLLEKKRDFTKSNND 79

Query: 162 KINKADIHSR--------------YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN--- 203
           KI+    +                Y +  +G  T  + + +++E +   ++         
Sbjct: 80  KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV 139

Query: 204 ---TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
                   + + + K   + +  + +++ + E +I H D+KP NIL+    R  +K+ DF
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGR--VKLSDF 196

Query: 261 GSSCHV-GQTLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKN 317
           G S ++  + +     +  +  PE            +D+WSLG  L  +      FS K 
Sbjct: 197 GESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256

Query: 318 EVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTI 377
            + ++   I               +T                         P  +     
Sbjct: 257 SLVELFNNI---------------RTKNI--------------------EYPLDRNHFLY 281

Query: 378 LGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
              +                       D +   L  +P +RI+  + L+HE+    ++++
Sbjct: 282 PLTNKKSTCSNNFLSNE--------DIDFLKLFLRKNPAERITSEDALKHEWLADTNIED 333

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  137 bits (346), Expect = 2e-37
 Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 31/245 (12%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI------- 155
                F + YE   +LG+G    V +        + A+KII         A+        
Sbjct: 10  HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69

Query: 156 ---EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYN-LIRNTNFHGVS 210
              EV +L K+     H   I++LK  +       LVF+L+    L++ L         S
Sbjct: 70  TLKEVDILRKV---SGH-PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL---S 122

Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQ 268
              T+K  + L   +  L    L+I+H DLKPENILL       IK+ DFG SC +  G+
Sbjct: 123 EKETRKIMRALLEVICALHK--LNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGE 178

Query: 269 TLYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQM 322
            L +   +  Y +PE++          Y   +DMWS G I+  L  G P F  + ++  +
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238

Query: 323 TKIIE 327
             I+ 
Sbjct: 239 RMIMS 243

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KDL+ R L   P+KR +    L H FF ++ V+ 
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  137 bits (346), Expect = 4e-37
 Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 30/241 (12%)

Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-------- 155
           + +   D Y +   LG G+ G+V  AF+ +   +VAIKII +K+ F   +          
Sbjct: 4   YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNV 62

Query: 156 --EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLI-RNTNFHGVSL 211
             E+++L+K+N    H   I+K+K  F  +++  +V EL+    L++ +  N        
Sbjct: 63  ETEIEILKKLN----H-PCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRL---KE 113

Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFGSSCHV--GQ 268
              K +  Q+  A+ +L      IIH DLKPEN+LL S  +   IKI DFG S  +    
Sbjct: 114 ATCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171

Query: 269 TLYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +     +  Y +PEVL+ +    Y+ A+D WSLG IL    +G P FS       +   
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231

Query: 326 I 326
           I
Sbjct: 232 I 232

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
            DL+ ++L  DPK R +    LRH +     +  
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  137 bits (348), Expect = 6e-37
 Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 37/314 (11%)

Query: 38  RDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQL-----SHNETRSNKKEKKYVHNDG 92
           R  A   +R L     +  +           + A L       N+ +    E  Y  + G
Sbjct: 19  RRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMG 78

Query: 93  HDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQ 152
            +DE  D+     ++F  +Y+   ++G+G    V +        + A+KI++     L+ 
Sbjct: 79  PEDELPDW--AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSP 136

Query: 153 AQI---------EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYN-LI 201
            Q+         E  +L ++     H  +I+ L   +   + + LVF+L+    L++ L 
Sbjct: 137 EQLEEVREATRRETHILRQVAG---H-PHIITLIDSYESSSFMFLVFDLMRKGELFDYLT 192

Query: 202 RNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
                   S   T+   + L  A++FL +   +I+H DLKPENILL       I++ DFG
Sbjct: 193 EKVAL---SEKETRSIMRSLLEAVSFLHA--NNIVHRDLKPENILLDD--NMQIRLSDFG 245

Query: 262 SSCHV--GQTLYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLF 313
            SCH+  G+ L +   +  Y +PE+L          Y   +D+W+ G IL  L  G P F
Sbjct: 246 FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305

Query: 314 SGKNEVDQMTKIIE 327
             + ++  +  I+E
Sbjct: 306 WHRRQILMLRMIME 319

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLK 432
           KDLI R+L  DP+ R++    L+H FF +
Sbjct: 337 KDLISRLLQVDPEARLTAEQALQHPFFER 365

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  135 bits (343), Expect = 7e-37
 Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 42/252 (16%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKIN 164
           ++L  +E    LG+G FG V +A +  + C  AIK I+  N++    +   EV+ L K+ 
Sbjct: 2   RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61

Query: 165 KADIHSRYIVKLKGHF------------TWKNHLCLVFELLS-YNLYNLIRNTN-FHGVS 210
               H   IV+    +            + K +L +  +L    NL + +          
Sbjct: 62  ----H-PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116

Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT- 269
            ++      Q+  A+ FL S    ++H DLKP NI         +K+ DFG    + Q  
Sbjct: 117 RSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDE 172

Query: 270 --------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
                             + ++ Y SPE + G  Y   +D++SLG IL EL    P  + 
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--PFSTQ 230

Query: 316 KNEVDQMTKIIE 327
              V  +T +  
Sbjct: 231 MERVRTLTDVRN 242

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  137 bits (346), Expect = 7e-37
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 16/272 (5%)

Query: 60  NEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLG 119
           +  +++        +      +               +Y     + +   D +E+++ LG
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELG 62

Query: 120 KGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH 179
           +G+   V +      +   A+K++K K       + E+ +L +++    H   I+KLK  
Sbjct: 63  RGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVRTEIGVLLRLS----H-PNIIKLKEI 116

Query: 180 FTWKNHLCLVFELLSYN-LYNLI-RNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
           F     + LV EL++   L++ I     +   S        +Q+  A+A+L      I+H
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYY---SERDAADAVKQILEAVAYLHE--NGIVH 171

Query: 238 CDLKPENILLCSPKR-SAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAI 294
            DLKPEN+L  +P   + +KI DFG S  V     +     +  Y +PE+L G  Y   +
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231

Query: 295 DMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
           DMWS+G I   L  G   F  +     M + I
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRI 263

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KDL+ +++  DPKKR++    L+H +    + + 
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANF 316

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  135 bits (341), Expect = 9e-37
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 30/244 (12%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           K  +  L+ +EI   LGKG FG V  A + + K  +A+K++   +  L +A +E QL  +
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRRE 59

Query: 163 INKADIHSR----YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           +    I S      I++L G+F     + L+ E      +Y  ++           T  +
Sbjct: 60  VE---IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATY 114

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
             +L  AL++  S    +IH D+KPEN+LL S     +KI DFG S H   +       R
Sbjct: 115 ITELANALSYCHS--KRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSR------R 164

Query: 278 Y-------YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-L 329
                   Y  PE++ G  +D  +D+WSLG +  E   G+P F      +   +I  V  
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 224

Query: 330 GMPP 333
             P 
Sbjct: 225 TFPD 228

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           +DLI R+L ++P +R     VL H +   +S
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITANS 265

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  135 bits (342), Expect = 2e-36
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 25/229 (10%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK 162
           ++  +F D YE+   +G GS+    +        + A+KII   K        E+++L +
Sbjct: 15  RNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLR 71

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFA--- 218
             +   H   I+ LK  +    ++ +V EL+    L + I    F       +++ A   
Sbjct: 72  YGQ---H-PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF------FSEREASAV 121

Query: 219 -QQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKIIDFGSSCHV---GQTLYQ 272
              +   + +L +    ++H DLKP NIL         +I+I DFG +  +      L  
Sbjct: 122 LFTITKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
              +  + +PEVL    YD A D+WSLG +L  + TG   F+   +   
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP 228

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           KDL+ +ML  DP +R++   VLRH + +    
Sbjct: 255 KDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  133 bits (338), Expect = 4e-36
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 19/229 (8%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E F   Y +  LLGKG FG V       ++ QVAIK+I   +              +
Sbjct: 24  KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83

Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHG-VSLN 212
           EV LL K+     H   +++L   F  +    LV E       L++ I      G +   
Sbjct: 84  EVALLWKVGAGGGH-PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEG 139

Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
            ++ F  Q+  A+    S    ++H D+K ENIL+   +R   K+IDFGS   +    Y 
Sbjct: 140 PSRCFFGQVVAAIQHCHS--RGVVHRDIKDENILI-DLRRGCAKLIDFGSGALLHDEPYT 196

Query: 273 YIQ-SRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEV 319
               +R Y  PE +    Y  L   +WSLG +L ++  G+  F    E+
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  134 bits (338), Expect = 5e-36
 Identities = 52/239 (21%), Positives = 83/239 (34%), Gaps = 32/239 (13%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINKADIH 169
            Y     LG+G F  V       +    A+K I  +++    +AQ E  +    N    H
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN----H 85

Query: 170 SRYIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLC 222
              I++L  +       K+   L+        L+N I      G  L   +       +C
Sbjct: 86  -PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------------CHVGQTL 270
             L  + +      H DLKP NILL    +    ++D GS                 Q  
Sbjct: 145 RGLEAIHAK--GYAHRDLKPTNILLGDEGQ--PVLMDLGSMNQACIHVEGSRQALTLQDW 200

Query: 271 YQYIQSRYYRSPEVLLGIPY---DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
                +  YR+PE+     +   D   D+WSLGC+L  +  GE  +    +      + 
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  132 bits (335), Expect = 2e-35
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 103 KHGEKFLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
                  D Y++   +LG G  G+V++ F      + A+K++ +      +A+ EV    
Sbjct: 21  PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHW 76

Query: 162 KINKADIHSRYIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK 216
           + +       +IV +   +      K  L ++ E +    L++ I+       +     +
Sbjct: 77  QASG---G-PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 132

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV-GQTLYQYI 274
             + +  A+ FL S   +I H D+KPEN+L  S ++ + +K+ DFG +       L    
Sbjct: 133 IMRDIGTAIQFLHS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 190

Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            + YY +PEVL    YD + DMWSLG I+  L  G P F           +  
Sbjct: 191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRH 427
           K LI  +L  DP +R++ T  + H
Sbjct: 265 KQLIRLLLKTDPTERLTITQFMNH 288

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  131 bits (331), Expect = 3e-35
 Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +D ++I   LGKG FG V  A + + K  +A+K++   +  L +  +E QL  +I    I
Sbjct: 13  IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIE---I 67

Query: 169 HSR----YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQQLC 222
            S      I+++  +F  +  + L+ E      LY  ++    HG      +  F ++L 
Sbjct: 68  QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELA 124

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY---- 278
            AL +       +IH D+KPEN+L+    +  +KI DFG S H           R     
Sbjct: 125 DALHYCHE--RKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLR------RRTMCG 174

Query: 279 ---YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
              Y  PE++ G  +D  +D+W  G +  E   G P F   +  +   +I+ V L  PP
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           KDLI ++L Y P +R+    V+ H +   +S
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  132 bits (333), Expect = 3e-35
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 21/229 (9%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQI 155
           K  E    +Y++  LLG G FG V       +   VAIK ++  +       P   +  +
Sbjct: 36  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95

Query: 156 EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHG-VSLN 212
           EV LL+K++        +++L   F   +   L+ E       L++ I      G +   
Sbjct: 96  EVVLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEE 149

Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
           L + F  Q+  A+    +    ++H D+K ENIL+    R  +K+IDFGS   +  T+Y 
Sbjct: 150 LARSFFWQVLEAVRHCHN--CGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYT 206

Query: 273 YIQ-SRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEV 319
               +R Y  PE +    Y   +  +WSLG +L ++  G+  F    E+
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  130 bits (329), Expect = 7e-35
 Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQL 159
           ++I + E      E++ ++G+G+FG V KA    +   VAIK I+++        +E++ 
Sbjct: 3   HMIDYKE-----IEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESES-ERKAFIVELRQ 54

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT-NFHGVSLNLTKKF 217
           L ++     +   IVKL G     N +CLV E     +LYN++         +      +
Sbjct: 55  LSRV-----NHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107

Query: 218 AQQLCCALAFL-SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
             Q    +A+L S    ++IH DLKP N+LL +   + +KI DFG++C +   +     S
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGS 166

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ 321
             + +PEV  G  Y    D++S G IL E+ T    F        
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  128 bits (324), Expect = 2e-34
 Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 20/247 (8%)

Query: 111 RYE-IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKA 166
           R+   D  +G+GSF  V K  D E   +VA   ++++K       + + E ++L+ +   
Sbjct: 26  RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-- 83

Query: 167 DIHSRYIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQL 221
             H   IV+    +      K  + LV EL++   L   ++   F  + + + + + +Q+
Sbjct: 84  --H-PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQI 138

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYR 280
              L FL +    IIH DLK +NI + +    ++KI D G +     +     I +  + 
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFI-TGPTGSVKIGDLGLATLKRASFAKAVIGTPEFM 197

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +PE+     YD ++D+++ G  ++E+ T E  +S      Q+ + +   G+ P      A
Sbjct: 198 APEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV-TSGVKPASFDKVA 255

Query: 341 SKTSKYF 347
               K  
Sbjct: 256 IPEVKEI 262

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  131 bits (330), Expect = 3e-34
 Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 19/272 (6%)

Query: 65  TKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI-DTLLGKGSF 123
                    +        +                 +       +D Y++   +LG G  
Sbjct: 16  APAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGIN 75

Query: 124 GQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF--- 180
           G+V++ F+   + + A+K++++      +A+ EV+L  + ++      +IV++   +   
Sbjct: 76  GKVLQIFNKRTQEKFALKMLQDCP----KARREVELHWRASQ---C-PHIVRIVDVYENL 127

Query: 181 -TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHC 238
              +  L +V E L    L++ I++      +     +  + +  A+ +L S  ++I H 
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHR 185

Query: 239 DLKPENILLCSPKR-SAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGIPYDLAID 295
           D+KPEN+L  S +  + +K+ DFG +       +L     + YY +PEVL    YD + D
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245

Query: 296 MWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           MWSLG I+  L  G P F   + +     +  
Sbjct: 246 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           K LI  +L  +P +R++ T  + H + ++ + 
Sbjct: 299 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  129 bits (326), Expect = 3e-34
 Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 23/226 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +        +G+GSFG+V +  D +   Q A+K +            E+          +
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACA-----GL 107

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            S  IV L G       + +  ELL   +L  LI+      +  +    +  Q    L +
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEY 165

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--------YY 279
           L +    I+H D+K +N+LL S   S   + DFG +  +                    +
Sbjct: 166 LHT--RRILHGDVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            +PEV++G P D  +D+WS  C+++ +  G   ++         KI
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 268

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  127 bits (322), Expect = 5e-34
 Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 28/248 (11%)

Query: 95  DENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP------ 148
            ++    +   E      E +  +GKG FG V K    ++K  VAIK +           
Sbjct: 9   PKSRLPTLADNE-----IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63

Query: 149 --FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTN 205
                + Q EV ++  +N    H   IVKL G         +V E +   +LY+ + +  
Sbjct: 64  IEKFQEFQREVFIMSNLN----H-PNIVKLYG-LMHNP-PRMVMEFVPCGDLYHRLLDKA 116

Query: 206 FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA---IKIIDFGS 262
            H +  ++  +    +   + ++ +    I+H DL+  NI L S   +A    K+ DFG 
Sbjct: 117 -HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175

Query: 263 SCHVGQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD 320
           S     ++   + +  + +PE +      Y    D +S   IL  + TGE  F   +   
Sbjct: 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG- 234

Query: 321 QMTKIIEV 328
           ++  I  +
Sbjct: 235 KIKFINMI 242

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  127 bits (322), Expect = 1e-33
 Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 34/235 (14%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINKADIH 169
           R  +  +L +G F  V +A D     + A+K +  N++        EV  ++K++     
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS----G 84

Query: 170 SRYIVKLKGHFTWKNH--------LCLVFELLSYNLYNLIRNTNFHG-VSLNLTKKFAQQ 220
              IV+     +              L+ EL    L   ++     G +S +   K   Q
Sbjct: 85  HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--- 277
            C A+  +   +  IIH DLK EN+LL +     IK+ DFGS+  +         ++   
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT--IKLCDFGSATTISHYPDYSWSAQRRA 202

Query: 278 ------------YYRSPEVL---LGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
                        YR+PE++      P     D+W+LGCIL  L   +  F    
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  126 bits (318), Expect = 3e-33
 Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 51/266 (19%)

Query: 104 HGEKFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLL 160
              +F D Y++ + +LG+G+  +V    +     + A+KII  K+P   ++++  EV++L
Sbjct: 6   FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII-EKQPGHIRSRVFREVEML 64

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--------N 212
            +      H R +++L   F  ++   LVFE +              G S+        +
Sbjct: 65  YQCQG---H-RNVLELIEFFEEEDRFYLVFEKMR-------------GGSILSHIHKRRH 107

Query: 213 LTKKFA----QQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHV- 266
             +  A    Q +  AL FL +    I H DLKPENIL   P + S +KI DF     + 
Sbjct: 108 FNELEASVVVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165

Query: 267 ---------GQTLYQYIQSRYYRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPL 312
                       L     S  Y +PEV+         YD   D+WSLG IL  L +G P 
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225

Query: 313 FSGKNEVDQMTKIIEVLGMPPGYLLH 338
           F G+   D      E        L  
Sbjct: 226 FVGRCGSDCGWDRGEACPACQNMLFE 251

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN 437
           KDLI ++L  D K+R+S   VL+H +    + +N
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  123 bits (312), Expect = 1e-32
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 19/234 (8%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ +++  LLGKGSF  V +A       +VAIK+I  K   + +A +  ++  ++    I
Sbjct: 10  IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA--MYKAGMVQRVQNEV---KI 64

Query: 169 HSR----YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           H +     I++L  +F   N++ LV E+     +   ++N      S N  + F  Q+  
Sbjct: 65  HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIIT 123

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
            + +L S    I+H DL   N+LL       IKI DFG +  +    +  Y    +  Y 
Sbjct: 124 GMLYLHS--HGILHRDLTLSNLLLTRNMN--IKIADFGLATQLKMPHEKHYTLCGTPNYI 179

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
           SPE+     + L  D+WSLGC+   L  G P F      + + K++     MP 
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS 233

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 46.4 bits (111), Expect = 8e-06
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           KDLI ++L  +P  R+S ++VL H F  ++S
Sbjct: 240 KDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  125 bits (315), Expect = 1e-32
 Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 31/246 (12%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
             RY     LGKG F +  +  D + K   A KI+      L +     ++  +I+   I
Sbjct: 40  RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLKPHQREKMSMEIS---I 94

Query: 169 HSR----YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFAQQLC 222
           H      ++V   G F   + + +V EL     L  L +       ++    + + +Q+ 
Sbjct: 95  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIV 151

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY---- 278
               +L      +IH DLK  N+ L       +KI DFG +     T  +Y   R     
Sbjct: 152 LGCQYLHR--NRVIHRDLKLGNLFLNE--DLEVKIGDFGLA-----TKVEYDGERKKVLC 202

Query: 279 ----YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
               Y +PEVL    +   +D+WS+GCI+  L  G+P F      +   +I +     P 
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 262

Query: 335 YLLHGA 340
           ++   A
Sbjct: 263 HINPVA 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
             LI +ML  DP  R +   +L  EFF    +
Sbjct: 269 ASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  128 bits (324), Expect = 1e-32
 Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 17/235 (7%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            + +    +LGKG FG+V            A K ++ KK    +    + L EK     +
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE-KKRIKKRKGEAMALNEKQILEKV 241

Query: 169 HSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           +SR++V L   +  K+ LCLV  L     L +++Y++ +     G        +A ++CC
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICC 297

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
            L  L      I++ DLKPENILL       I+I D G + HV  GQT+   + +  Y +
Sbjct: 298 GLEDLHR--ERIVYRDLKPENILL--DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353

Query: 282 PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE-VLGMPPGY 335
           PEV+    Y  + D W+LGC+L E+  G+  F  + +  +  ++   V  +P  Y
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY 408

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  123 bits (311), Expect = 2e-32
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 21/241 (8%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
             RY     LGKG F +  +  D + K   A KI+      L +     ++  +I+   I
Sbjct: 14  RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL--LLKPHQREKMSMEIS---I 68

Query: 169 HSR----YIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFAQQLC 222
           H      ++V   G F   + + +V EL     L  L +       ++    + + +Q+ 
Sbjct: 69  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIV 125

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYY 279
               +L      +IH DLK  N+ L       +KI DFG +  V   G+       +  Y
Sbjct: 126 LGCQYLHR--NRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
            +PEVL    +   +D+WS+GCI+  L  G+P F      +   +I +     P ++   
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 241

Query: 340 A 340
           A
Sbjct: 242 A 242

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
             LI +ML  DP  R +   +L  EFF   
Sbjct: 243 ASLIQKMLQTDPTARPTINELLNDEFFTSG 272

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  124 bits (313), Expect = 2e-32
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQI--EVQLLE 161
            +  +  Y +   +GKG+F +V  A       +VAIKII K +    +  ++  EV++++
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQ 219
            +N    H   IVKL      +  L L+ E  S   +++ +     HG +     +   +
Sbjct: 70  ILN----H-PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFR 121

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSR 277
           Q+  A+ +       I+H DLK EN+LL +     IKI DFG S     G  L  +  + 
Sbjct: 122 QIVSAVQYCHQ--KRIVHRDLKAENLLLDADMN--IKIADFGFSNEFTVGGKLDAFCGAP 177

Query: 278 YYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            Y +PE+  G  YD   +D+WSLG IL  L +G   F G+N  +   +++ 
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  125 bits (314), Expect = 3e-32
 Identities = 45/346 (13%), Positives = 101/346 (29%), Gaps = 64/346 (18%)

Query: 31  ARIPMQFRDPATAPLRKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHN 90
            R  + F+ P    + +L       +  I +          Q + +   S          
Sbjct: 10  GRENLYFQGPGDVVIEEL-------FNRIPQANVRTTSEYMQSAADSLVSTS-------- 54

Query: 91  DGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL 150
             +  + +    + GE+        T+LG+      ++A D E      + +    +   
Sbjct: 55  LWNTGQPFRVESELGERPR-TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP 113

Query: 151 NQAQ-------IEVQLLEKINKADIHSRY-----------------IVKLKGHF--TWKN 184
           + A        + ++LL  I        +                 +++++      W  
Sbjct: 114 SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVL 173

Query: 185 HLCLVFELLSYNLYNLIRNTNFHG-----VSLNLTKKFAQQLCCALAFLSSPELSIIHCD 239
               ++  +  NL         H      +  +   +   Q+   LA L      ++H  
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231

Query: 240 LKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL-----------GI 288
           L+P +I+L   +R  + +  F      G        SR +  PE+               
Sbjct: 232 LRPVDIVLD--QRGGVFLTGFEHLVRDG-ARVVSSVSRGFEPPELEARRATISYHRDRRT 288

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE-VLGMPP 333
               + D W+LG ++  +   +   +    +     I      +P 
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQ 334

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 5/30 (16%), Positives = 12/30 (40%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           + L+   L Y  + R+ P   +    + + 
Sbjct: 337 RALLEGFLRYPKEDRLLPLQAMETPEYEQL 366

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  124 bits (312), Expect = 5e-32
 Identities = 79/338 (23%), Positives = 132/338 (39%), Gaps = 37/338 (10%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLL 160
           K GE   D +E  + LG G+ G V K         +A K+I    K    NQ   E+Q+L
Sbjct: 26  KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELL---SYNLYNLIRNTNFHGVSLNLTKKF 217
                 + +S YIV   G F     + +  E +   S  L  +++      +   +  K 
Sbjct: 86  -----HECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAG--RIPEQILGKV 136

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQS 276
           +  +   L +L   +  I+H D+KP NIL+ S  R  IK+ DFG S  +  ++   ++ +
Sbjct: 137 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANSFVGT 193

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           R Y SPE L G  Y +  D+WS+G  LVE+  G       +  +        +       
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAET 253

Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
                   +  ++   +S       +           LD I  V+   P   +      S
Sbjct: 254 PPRPRTPGRPLNKFGMDSRPPMAIFEL----------LDYI--VNEPPP---KLPSGVFS 298

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
           L     F+D + + L  +P +R     ++ H F  +  
Sbjct: 299 LE----FQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  122 bits (308), Expect = 7e-32
 Identities = 61/256 (23%), Positives = 100/256 (39%), Gaps = 22/256 (8%)

Query: 70  KAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKA 129
           K    H+                   +  D  I   +       I   +G GSFG V +A
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCD-----LNIKEKIGAGSFGTVHRA 56

Query: 130 FDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL 186
             H     VA+KI+  +      +N+   EV +++++     H   IV   G  T   +L
Sbjct: 57  EWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLR----H-PNIVLFMGAVTQPPNL 109

Query: 187 CLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
            +V E LS  +LY L+  +     +        A  +   + +L +    I+H +LK  N
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 169

Query: 245 ILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---YYRSPEVLLGIPYDLAIDMWSLGC 301
           +L+       +K+ DFG S     T      +     + +PEVL   P +   D++S G 
Sbjct: 170 LLVDKKYT--VKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227

Query: 302 ILVELHTGEPLFSGKN 317
           IL EL T +  +   N
Sbjct: 228 ILWELATLQQPWGNLN 243

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  119 bits (300), Expect = 8e-31
 Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 21/236 (8%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKAD 167
            D      +LGKG++G V    D   + ++AIK I      +      E+ L +      
Sbjct: 21  YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK-----H 75

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG---VSLNLTKKFAQQLCC 223
           +  + IV+  G F+    + +  E +   +L  L+R+    G    +      + +Q+  
Sbjct: 76  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS--KWGPLKDNEQTIGFYTKQILE 133

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYR 280
            L +L   +  I+H D+K +N+L+ +     +KI DFG+S  +         +  +  Y 
Sbjct: 134 GLKYLHDNQ--IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 190

Query: 281 SPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPP 333
           +PE++   P  Y  A D+WSLGC ++E+ TG+P F         M K+      P 
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  119 bits (301), Expect = 1e-30
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 27/231 (11%)

Query: 104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---------PFLNQAQ 154
              ++  +Y   + LG G+FG V  A D E+  +V +K IK +K         P L +  
Sbjct: 18  CEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY--NLYNLIRNTNFHG-VSL 211
           +E+ +L ++     H   I+K+   F  +    LV E      +L+  I     H  +  
Sbjct: 78  LEIAILSRVE----H-ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR---HPRLDE 129

Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQT 269
            L     +QL  A+ +L      IIH D+K ENI++       IK+IDFGS+ ++  G+ 
Sbjct: 130 PLASYIFRQLVSAVGYLRL--KDIIHRDIKDENIVIAE--DFTIKLIDFGSAAYLERGKL 185

Query: 270 LYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEV 319
            Y +  +  Y +PEVL+G PY    ++MWSLG  L  L   E  F    E 
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET 236

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  117 bits (296), Expect = 2e-30
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKAD 167
            ++ ++G G FG+V +AF   ++  VA+K  ++         I     E +L   +    
Sbjct: 10  TLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLK--- 64

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   I+ L+G    + +LCLV E      L  ++       +  ++   +A Q+   + 
Sbjct: 65  -H-PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMN 119

Query: 227 FL-SSPELSIIHCDLKPENILL------CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY- 278
           +L     + IIH DLK  NIL+             +KI DFG +    +T        Y 
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA 179

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
           + +PEV+    +    D+WS G +L EL TGE  F G +
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  118 bits (297), Expect = 2e-30
 Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 16/248 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            D  E    LG+G++G V K         +A+K I+       Q ++ + L   I+   +
Sbjct: 6   ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTV 63

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSL--NLTKKFAQQLCCALA 226
              + V   G    +  + +  EL+  +L    +     G ++  ++  K A  +  AL 
Sbjct: 64  DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ--YIQSRYYRSPEV 284
            L S +LS+IH D+KP N+L+ +     +K+ DFG S ++   + +      + Y +PE 
Sbjct: 124 HLHS-KLSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPER 180

Query: 285 LLG----IPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
           +        Y +  D+WSLG  ++EL     P  S      Q+ +++E     P      
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE--EPSPQLPADK 238

Query: 340 ASKTSKYF 347
            S     F
Sbjct: 239 FSAEFVDF 246

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  122 bits (307), Expect = 2e-30
 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKL 176
           +LG+G FG+V            A K +  KK    +   +  ++EK   A +HSR+IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLN-KKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250

Query: 177 KGHFTWKNHLCLVFEL-----LSYNLYNLI-RNTNFHGVSLNLTKKFAQQLCCALAFLSS 230
              F  K  LCLV  +     + Y++YN+   N  F          +  Q+   L  L  
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF---QEPRAIFYTAQIVSGLEHLHQ 307

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVLLG 287
              +II+ DLKPEN+LL       ++I D G +  +         Y  +  + +PE+LLG
Sbjct: 308 --RNIIYRDLKPENVLL--DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363

Query: 288 IPYDLAIDMWSLGCILVELHTGEPLFSGKNE---VDQMTKII 326
             YD ++D ++LG  L E+      F  + E     ++ + +
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV 405

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  118 bits (297), Expect = 3e-30
 Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 23/230 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            + ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   + +
Sbjct: 29  PEDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRL 87

Query: 169 HSRYIVKLKGHFTWKNHLCLVF------ELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
              + VKL   F     L          ELL Y    + +  +F       T+ +  ++ 
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKY----IRKIGSF---DETCTRFYTAEIV 140

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY---- 278
            AL +L      IIH DLKPENILL       I+I DFG++  +     Q   + +    
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTA 196

Query: 279 -YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
            Y SPE+L       + D+W+LGCI+ +L  G P F   NE     KII+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  116 bits (294), Expect = 3e-30
 Identities = 44/226 (19%), Positives = 80/226 (35%), Gaps = 24/226 (10%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIH 169
              T L +   G++ K         + +K++K +            E   L   +    H
Sbjct: 13  NFLTKLNENHSGELWKGRWQGND--IVVKVLKVRDWSTRKSRDFNEECPRLRIFS----H 66

Query: 170 SRYIVKLKGHFT--WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
              ++ + G        H  L+   + Y +LYN++       V  +   KFA  +   +A
Sbjct: 67  -PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEV 284
           FL + E  I    L   ++++        +I              +Y       + +PE 
Sbjct: 126 FLHTLEPLIPRHALNSRSVMIDEDMT--ARISMADVKFSFQSPGRMYAPA----WVAPEA 179

Query: 285 LLGIPYDL---AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           L   P D    + DMWS   +L EL T E  F+  + ++   K+  
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL 225

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  117 bits (295), Expect = 5e-30
 Identities = 57/290 (19%), Positives = 95/290 (32%), Gaps = 77/290 (26%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKIN 164
           ++L  +E    +G+G FG V +A +  + C  AIK I+  N++    +   EV+ L K+ 
Sbjct: 3   RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 62

Query: 165 KADIHSRYIVKLKGHFTWKNH--------------------------------------- 185
              I   +   L+                                               
Sbjct: 63  HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKN 122

Query: 186 -------------LCLVFELLSY-NLYNLIRNTNFHGV-SLNLTKKFAQQLCCALAFLSS 230
                        L +  +L    NL + +            +      Q+  A+ FL S
Sbjct: 123 TVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182

Query: 231 PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---------------LYQYIQ 275
               ++H DLKP NI         +K+ DFG    + Q                    + 
Sbjct: 183 --KGLMHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
           ++ Y SPE + G  Y   +D++SLG IL EL       +    V  +T +
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY--SFSTQMERVRIITDV 286

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  117 bits (294), Expect = 6e-30
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 35/232 (15%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLE 161
           IK      D      +LG G  G+V++ F+   + + A+K++++          EV+L  
Sbjct: 10  IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHW 65

Query: 162 KINKADIHSRYIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK 216
           + ++      +IV++   +      +  L +V E L    L++ I++      +     +
Sbjct: 66  RASQ---C-PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGSSCHVGQTLYQYIQ 275
             + +  A+ +L S  ++I H D+KPEN+L  S +  + +K+ DFG +            
Sbjct: 122 IMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFA------------ 167

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
                  E      YD + DMWSLG I+  L  G P F   + +     +  
Sbjct: 168 ------KETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKHSV 435
           K LI  +L  +P +R++ T  + H + ++ + 
Sbjct: 234 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  118 bits (296), Expect = 1e-29
 Identities = 40/264 (15%), Positives = 79/264 (29%), Gaps = 45/264 (17%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLLEKINK- 165
                T+LG+      ++A D E      + +     +     + Q + EV  L  +   
Sbjct: 79  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 138

Query: 166 -----ADIHSRY-----IVKLKGHFT-----------WKNHLCLVFELLSYNLYNLIRNT 204
                A +H R+     +VK                 W      ++  +  NL       
Sbjct: 139 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 198

Query: 205 NFHG-----VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
             H      +  +   +   Q+   LA L      ++H  L+P +I+L   +R  + +  
Sbjct: 199 LSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDIVLD--QRGGVFLTG 254

Query: 260 FGSSCHVGQTLYQYIQSRY----YRSPEVLLGIP-----YDLAIDMWSLGCILVELHTGE 310
           F      G +    I   +      +  +L            A D W+LG  +  +   +
Sbjct: 255 FEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314

Query: 311 PLFSGKNEVDQMTKII-EVLGMPP 333
              +    +     I      +P 
Sbjct: 315 LPNTDDAALGGSEWIFRSCKNIPQ 338

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 5/28 (17%), Positives = 11/28 (39%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + L+   L Y  + R+ P   +    +
Sbjct: 340 VRALLEGFLRYPKEDRLLPLQAMETPEY 367

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  115 bits (290), Expect = 1e-29
 Identities = 69/342 (20%), Positives = 128/342 (37%), Gaps = 90/342 (26%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKP-FLNQAQIEVQLLEKI 163
             F++ +++   LG+G++G+V  A +   +  VA+KI+   +        + E+ + + +
Sbjct: 3   VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLC 222
           N    H   +VK  GH    N   L  E  S   L++ I      G+     ++F  QL 
Sbjct: 63  N----HE-NVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLM 115

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY---- 278
             + +L    + I H D+KPEN+LL       +KI DFG +     T+++Y         
Sbjct: 116 AGVVYLHG--IGITHRDIKPENLLLDERDN--LKISDFGLA-----TVFRYNNRERLLNK 166

Query: 279 ------YRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
                 Y +PE+L    +    +D+WS G +         L +                M
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIV---------LTA----------------M 201

Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
             G L          +D+ SD+        + +    P  K       +D+         
Sbjct: 202 LAGELP---------WDQPSDSCQEYSDWKEKKTYLNPWKK-------IDSAP------- 238

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                         L+ ++L  +P  RI+  ++ +  ++ K 
Sbjct: 239 ------------LALLHKILVENPSARITIPDIKKDRWYNKP 268

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  115 bits (291), Expect = 2e-29
 Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 42/238 (17%)

Query: 108 FLDRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI---EV 157
           FL  ++I         L+GKG FGQV     H E   VAI++I  ++   +Q +    EV
Sbjct: 24  FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREV 80

Query: 158 QLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK 216
               +      H   +V   G      HL ++  L     LY+++R+     + +N T++
Sbjct: 81  MAYRQTR----H-ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQ 134

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
            AQ++   + +L +    I+H DLK +N+   + K   + I DFG     G       + 
Sbjct: 135 IAQEIVKGMGYLHAK--GILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRRED 189

Query: 277 RY--------YRSPEVL---------LGIPYDLAIDMWSLGCILVELHTGEPLFSGKN 317
           +         + +PE++           +P+    D+++LG I  ELH  E  F  + 
Sbjct: 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  114 bits (288), Expect = 6e-29
 Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 18/247 (7%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++  E    +G G+ GQV K    +    +A+K ++         +I + L   +     
Sbjct: 24  INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDL--DVVLKSH 81

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              YIV+  G F     + +  EL+      L +      +   +  K    +  AL +L
Sbjct: 82  DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYL 140

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ--YIQSRYYRSPEVL- 285
              +  +IH D+KP NILL    R  IK+ DFG S  +     +        Y +PE + 
Sbjct: 141 KE-KHGVIHRDVKPSNILLDE--RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERID 197

Query: 286 ----LGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
                   YD+  D+WSLG  LVEL TG+ P  + K + + +TK+  +   PP  LL G 
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV--LQEEPP--LLPGH 253

Query: 341 SKTSKYF 347
              S  F
Sbjct: 254 MGFSGDF 260

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  115 bits (290), Expect = 6e-29
 Identities = 67/224 (29%), Positives = 91/224 (40%), Gaps = 15/224 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            DRY+    +G G+FG      D   K  VA+K I+         Q E+     +     
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR---- 74

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG-VSLNLTKKFAQQLCCALA 226
           H   IV+ K       HL ++ E  S   LY  I N    G  S +  + F QQL   ++
Sbjct: 75  H-PNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVS 130

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYIQSRYYRSPEV 284
           +  S  + I H DLK EN LL       +KI DFG S    +       + +  Y +PEV
Sbjct: 131 YCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 188

Query: 285 LLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           LL   YD    D+WS G  L  +  G   F    E     K I+
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ 232

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
             LI R+   DP  RIS   +  H +FLK+
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWFLKN 281

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  114 bits (287), Expect = 8e-29
 Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 17/249 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            +  +    +G+G++G V K         +A+K I++      Q Q+ + L   +     
Sbjct: 21  AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL--DVVMRSS 78

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELL---SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
              YIV+  G    +    +  EL+       Y  + +     +   +  K       AL
Sbjct: 79  DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ--YIQSRYYRSPE 283
             L    L IIH D+KP NILL       IK+ DFG S  +  ++ +      R Y +PE
Sbjct: 139 NHLKE-NLKIIHRDIKPSNILLDR--SGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE 195

Query: 284 VL----LGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
            +        YD+  D+WSLG  L EL TG  P     +  DQ+T++  V G PP     
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--VKGDPPQLSNS 253

Query: 339 GASKTSKYF 347
              + S  F
Sbjct: 254 EEREFSPSF 262

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  115 bits (289), Expect = 1e-28
 Identities = 62/339 (18%), Positives = 109/339 (32%), Gaps = 44/339 (12%)

Query: 110 DRYEIDTLLGKG--SFGQVVKAFDHEEKCQVAIKII---KNKKPFLNQAQIEVQLLEKIN 164
             YE+ T++GKG      V  A        V ++ I         +   Q E+ +     
Sbjct: 25  GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVS---- 80

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
               +   IV  +  F   N L +V   ++Y +  +LI      G++        Q +  
Sbjct: 81  -KLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK 139

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL----------YQY 273
           AL ++    +  +H  +K  +IL+       + +    S+  +                 
Sbjct: 140 ALDYIHH--MGYVHRSVKASHILISV--DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS 195

Query: 274 IQSRYYRSPEVL--LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
           ++   + SPEVL      YD   D++S+G    EL  G   F        + + +   G 
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GT 253

Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
            P                L D S +  +       R   +  L   L      P      
Sbjct: 254 VP---------------CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP 298

Query: 392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              +       F   + + L  +P  R S + +L H FF
Sbjct: 299 SHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  114 bits (288), Expect = 1e-28
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKF-LDRYEIDTLLGKGSFGQVVKAFDHEEKCQV 138
           S ++  K       +D    +         LD+++    LG GSFG+V+     E     
Sbjct: 10  SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69

Query: 139 AIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF------EL 192
           A+KI+  K+  +   QIE  L EK     ++  ++VKL+  F   ++L +V       E+
Sbjct: 70  AMKILD-KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128

Query: 193 LSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
            S+    L R   F   S    + +A Q+     +L S  L +I+ DLKPEN+L+   ++
Sbjct: 129 FSH----LRRIGRF---SEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLI--DQQ 177

Query: 253 SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL 312
             I++ DFG +  V    +    +    +PE++L   Y+ A+D W+LG ++ E+  G P 
Sbjct: 178 GYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237

Query: 313 FSGKNEVDQMTKIIE 327
           F     +    KI+ 
Sbjct: 238 FFADQPIQIYEKIVS 252

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  112 bits (282), Expect = 2e-28
 Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)

Query: 83  KEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI 142
           K+  + H+ G  D   D+ I  G+       +   +G GSFG V K   H +   VA+K+
Sbjct: 2   KKGHHHHHHGSRDAADDWEIPDGQ-----ITVGQRIGSGSFGTVYKGKWHGD---VAVKM 53

Query: 143 IKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY 195
           +    P       F N    EV +L K      H   I+   G+ T    L +V +    
Sbjct: 54  LNVTAPTPQQLQAFKN----EVGVLRKTR----HVN-ILLFMGYST-APQLAIVTQWCEG 103

Query: 196 -NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA 254
            +LY+ +  +      +      A+Q    + +L +   SIIH DLK  NI L   + + 
Sbjct: 104 SSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFLH--EDNT 158

Query: 255 IKIIDFGSSCHVGQTLYQYIQSR-----YYRSPEVLLG---IPYDLAIDMWSLGCILVEL 306
           +KI DFG +    +    +   +      + +PEV+      PY    D+++ G +L EL
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218

Query: 307 HTGEPLFSGKNEVDQMTKIIEVLG 330
            TG+  +S  N  DQ   IIE++G
Sbjct: 219 MTGQLPYSNINNRDQ---IIEMVG 239

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  113 bits (285), Expect = 5e-28
 Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 21/265 (7%)

Query: 73  LSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDH 132
           L ++      ++ K + N     ++    I+      + YE+  ++G+G+FG+V      
Sbjct: 32  LVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHK 91

Query: 133 EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
             +   A+K++  K   + ++       E+   A  +S ++V+L   F    +L +V E 
Sbjct: 92  STRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150

Query: 193 LS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK 251
           +   +L NL+ N +         + +  ++  AL  + S  +  IH D+KP+N+LL   K
Sbjct: 151 MPGGDLVNLMSNYDV---PEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLD--K 203

Query: 252 RSAIKIIDFGSSCHVGQTLYQYIQSRY------YRSPEVLLG----IPYDLAIDMWSLGC 301
              +K+ DFG+   + +     ++         Y SPEVL        Y    D WS+G 
Sbjct: 204 SGHLKLADFGTCMKMNKE--GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 261

Query: 302 ILVELHTGEPLFSGKNEVDQMTKII 326
            L E+  G+  F   + V   +KI+
Sbjct: 262 FLYEMLVGDTPFYADSLVGTYSKIM 286

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  112 bits (283), Expect = 1e-27
 Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 14/269 (5%)

Query: 72  QLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKF-LDRYEIDTLLGKGSFGQVVKAF 130
            L                ++   +E    + K   +  ++ +E   LLGKG+FG+V+   
Sbjct: 109 GLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVK 168

Query: 131 DHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF 190
           +       A+KI+K K+  + + ++   L E     +    ++  LK  F   + LC V 
Sbjct: 169 EKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227

Query: 191 ELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC 248
           E  +     ++L R   F   S +  + +  ++  AL +L S E ++++ DLK EN++L 
Sbjct: 228 EYANGGELFFHLSRERVF---SEDRARFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLD 283

Query: 249 SPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVE 305
                 IKI DFG        G T+  +  +  Y +PEVL    Y  A+D W LG ++ E
Sbjct: 284 K--DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341

Query: 306 LHTGEPLFSGKNEVDQMTKII-EVLGMPP 333
           +  G   F  ++       I+ E +  P 
Sbjct: 342 MMCGRLPFYNQDHEKLFELILMEEIRFPR 370

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  110 bits (277), Expect = 2e-27
 Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 17/207 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADI 168
              +    +G+GS G V  A +     QVA+K++   K+        EV ++      D 
Sbjct: 45  LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM-----RDY 99

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
               +V++   +     L ++ E L    L +++        +        + +  ALA+
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRL---NEEQIATVCEAVLQALAY 156

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEV 284
           L +    +IH D+K ++ILL       +K+ DFG    + + + +    + + Y+ +PEV
Sbjct: 157 LHAQ--GVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEV 212

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEP 311
           +    Y   +D+WSLG +++E+  GEP
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEP 239

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  110 bits (277), Expect = 2e-27
 Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 30/231 (12%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L  ++I   LG GSFG+V            A+K++K K+  +   Q+E    E++  + +
Sbjct: 5   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63

Query: 169 HSRYIVKLKGHFTWKNHLCLVF------ELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
              +I+++ G F     + ++       EL S     L ++  F      + K +A ++C
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL----LRKSQRF---PNPVAKFYAAEVC 116

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY------QYIQS 276
            AL +L S    II+ DLKPENILL   K   IKI DFG + +V    Y       YI  
Sbjct: 117 LALEYLHS--KDIIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYTLCGTPDYI-- 170

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
               +PEV+   PY+ +ID WS G ++ E+  G   F   N +    KI+ 
Sbjct: 171 ----APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  109 bits (274), Expect = 3e-27
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 17/207 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADI 168
            +Y     +G+G+ G V  A D     +VAI+ +   ++P       E+ ++      + 
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM-----REN 74

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
            +  IV     +   + L +V E L+  +L +++  T              ++   AL F
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM---DEGQIAAVCRECLQALEF 131

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEV 284
           L S    +IH D+K +NILL      ++K+ DFG    +     +    + + Y+ +PEV
Sbjct: 132 LHS--NQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEP 311
           +    Y   +D+WSLG + +E+  GEP
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEP 214

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  111 bits (279), Expect = 4e-27
 Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 22/262 (8%)

Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
           S   + KYV +     E     +K      D +EI  ++G+G+F +V      +     A
Sbjct: 31  SELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYA 90

Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLY 198
           +KI+  K   L + ++     E+    +   R+I +L   F  +N+L LV E     +L 
Sbjct: 91  MKIMN-KWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL 149

Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
            L+       +   + + +  ++  A+  +    L  +H D+KP+NILL   +   I++ 
Sbjct: 150 TLLSKFGER-IPAEMARFYLAEIVMAIDSVHR--LGYVHRDIKPDNILL--DRCGHIRLA 204

Query: 259 DFGSSCHVGQTLYQYIQSRY------YRSPEVLLGI-------PYDLAIDMWSLGCILVE 305
           DFGS   +       ++S        Y SPE+L  +        Y    D W+LG    E
Sbjct: 205 DFGSCLKLRA--DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE 262

Query: 306 LHTGEPLFSGKNEVDQMTKIIE 327
           +  G+  F   +  +   KI+ 
Sbjct: 263 MFYGQTPFYADSTAETYGKIVH 284

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  111 bits (278), Expect = 7e-27
 Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 20/259 (7%)

Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVA 139
           S  + +K +       + +   +K      + +EI  ++G+G+FG+V            A
Sbjct: 44  SPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFA 103

Query: 140 IKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLY 198
           +KI+  K   L +A+      E+    +  S++I  L   F   N+L LV +     +L 
Sbjct: 104 MKILN-KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL 162

Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
            L+       +   + + +  ++  A+  +    L  +H D+KP+NIL+       I++ 
Sbjct: 163 TLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILM--DMNGHIRLA 217

Query: 259 DFGSSCHVGQTLYQYIQSRY------YRSPEVLLGIP-----YDLAIDMWSLGCILVELH 307
           DFGS   + +     +QS        Y SPE+L  +      Y    D WSLG  + E+ 
Sbjct: 218 DFGSCLKLME--DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275

Query: 308 TGEPLFSGKNEVDQMTKII 326
            GE  F  ++ V+   KI+
Sbjct: 276 YGETPFYAESLVETYGKIM 294

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  112 bits (281), Expect = 8e-27
 Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 29/241 (12%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKI 163
           ++ + +  ++G+G FG+V      +     A+K +  KK    +        E  +L  +
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLV 246

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFEL-----LSYNLYNLIRNTNFHGVSLNLTKKFA 218
           +  D    +IV +   F   + L  + +L     L Y+L    ++  F   S    + +A
Sbjct: 247 STGD--CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVF---SEADMRFYA 298

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-GQTLYQYIQSR 277
            ++   L  + +    +++ DLKP NILL   +   ++I D G +C    +  +  + + 
Sbjct: 299 AEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPHASVGTH 354

Query: 278 YYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ---MTKIIEV-LGMP 332
            Y +PEVL  G+ YD + D +SLGC+L +L  G   F      D+       + + + +P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414

Query: 333 P 333
            
Sbjct: 415 D 415

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  108 bits (271), Expect = 2e-26
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 33/238 (13%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
             F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I  E+ + + +
Sbjct: 3   VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKKFAQQL 221
           N    H   +VK  GH    N   L  E  S   L++ I        +     ++F  QL
Sbjct: 63  N----HE-NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQL 114

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY--- 278
              + +L    + I H D+KPEN+LL       +KI DFG +     T+++Y        
Sbjct: 115 MAGVVYLHG--IGITHRDIKPENLLLDERDN--LKISDFGLA-----TVFRYNNRERLLN 165

Query: 279 -------YRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQM-TKIIE 327
                  Y +PE+L    +    +D+WS G +L  +  GE  +   ++  Q  +   E
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 6/30 (20%), Positives = 16/30 (53%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
             L+ ++L  +P  RI+  ++ +  ++ K 
Sbjct: 239 LALLHKILVENPSARITIPDIKKDRWYNKP 268

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  108 bits (271), Expect = 2e-26
 Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 13/224 (5%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ ++   LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     + 
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNT 62

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
              ++  LK  F   + LC V E  +     ++L R   F   +    + +  ++  AL 
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALE 119

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPE 283
           +L S    +++ D+K EN++L       IKI DFG        G T+  +  +  Y +PE
Sbjct: 120 YLHS--RDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           VL    Y  A+D W LG ++ E+  G   F  ++       I+ 
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  107 bits (268), Expect = 2e-26
 Identities = 82/340 (24%), Positives = 122/340 (35%), Gaps = 82/340 (24%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INK-AD 167
           D YE+  ++G G+   V  A+   +K +VAIK I      L + Q  +  L K I   + 
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMDELLKEIQAMSQ 69

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQ------Q 220
            H   IV     F  K+ L LV +LLS  ++ ++I++    G   +     +       +
Sbjct: 70  CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR--- 277
           +   L +L       IH D+K  NILL      +++I DFG S  +              
Sbjct: 130 VLEGLEYLHK--NGQIHRDVKAGNILLGE--DGSVQIADFGVSAFLATGGDITRNKVRKT 185

Query: 278 -----YYRSPEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
                 + +PEV+     YD   D+WS G   +EL TG                      
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA--------------------- 224

Query: 332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN 391
            P            Y                      P  K L   L   N  P      
Sbjct: 225 AP------------YHK-------------------YPPMKVLMLTL--QNDPPSLETGV 251

Query: 392 EPGHSLADYMK-FKDLILRMLTYDPKKRISPTNVLRHEFF 430
           +    L  Y K F+ +I   L  DP+KR +   +LRH+FF
Sbjct: 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  107 bits (269), Expect = 4e-26
 Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 22/235 (9%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----E 156
           +   ++ +  Y I   LG+GSFG+V  A  ++ + +VA+K I +++             E
Sbjct: 1   MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFI-SRQLLKKSDMHMRVERE 59

Query: 157 VQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHG-VSLNLTK 215
           +  L+ +     H  +I+KL    T    + +V E     L++ I        ++ +  +
Sbjct: 60  ISYLKLLR----H-PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE---KKRMTEDEGR 111

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQY 273
           +F QQ+ CA+ +       I+H DLKPEN+LL       +KI DFG S     G  L   
Sbjct: 112 RFFQQIICAIEYCHR--HKIVHRDLKPENLLLDDNLN--VKIADFGLSNIMTDGNFLKTS 167

Query: 274 IQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
             S  Y +PEV+ G  Y    +D+WS G +L  +  G   F  +   +   K+  
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS 222

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  109 bits (274), Expect = 6e-26
 Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 14/262 (5%)

Query: 72  QLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFD 131
           +      +  +  K       +    +D         L  +    +LGKGSFG+V+ +  
Sbjct: 303 RQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSER 362

Query: 132 HEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKADIHSRYIVKLKGHFTWKNHLCLVF 190
                  A+KI+K K   +    +E  ++EK +        ++ +L   F   + L  V 
Sbjct: 363 KGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421

Query: 191 ELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC 248
           E ++    +Y++ +   F          +A ++   L FL S    II+ DLK +N++L 
Sbjct: 422 EYVNGGDLMYHIQQVGRF---KEPHAVFYAAEIAIGLFFLQS--KGIIYRDLKLDNVMLD 476

Query: 249 SPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVE 305
           S     IKI DFG    +   G T   +  +  Y +PE++   PY  ++D W+ G +L E
Sbjct: 477 S--EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534

Query: 306 LHTGEPLFSGKNEVDQMTKIIE 327
           +  G+  F G++E +    I+E
Sbjct: 535 MLAGQAPFEGEDEDELFQSIME 556

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  106 bits (266), Expect = 7e-26
 Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 22/237 (9%)

Query: 109 LDRYEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
            + +E+  +LGKG +G+V    K          A+K++K      N         E+   
Sbjct: 16  PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQ 220
            ++   +IV L   F     L L+ E LS       L    R   F     +    +  +
Sbjct: 76  EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIF---MEDTACFYLAE 129

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSR 277
           +  AL  L      II+ DLKPENI+L    +  +K+ DFG      H G   + +  + 
Sbjct: 130 ISMALGHLHQ--KGIIYRDLKPENIML--NHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII-EVLGMPP 333
            Y +PE+L+   ++ A+D WSLG ++ ++ TG P F+G+N    + KI+   L +PP
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  106 bits (267), Expect = 8e-26
 Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 14/225 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKAD 167
           ++ + +  +LGKGSFG+V  A   +     AIK +K K   L    +E  ++EK +    
Sbjct: 16  IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLSLA 74

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               ++  +   F  K +L  V E L+    +Y++     F    L+    +A ++   L
Sbjct: 75  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGL 131

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSP 282
            FL S    I++ DLK +NILL       IKI DFG              +  +  Y +P
Sbjct: 132 QFLHS--KGIVYRDLKLDNILLDK--DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAP 187

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           E+LLG  Y+ ++D WS G +L E+  G+  F G++E +    I  
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  106 bits (268), Expect = 9e-26
 Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKAD 167
              +    ++GKGSFG+V+ A    E+   A+K+++ KK  L + + +  + E+ +   +
Sbjct: 37  PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ-KKAILKKKEEKHIMSERNVLLKN 95

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
           +   ++V L   F   + L  V + ++     Y+L    R   F        + +A ++ 
Sbjct: 96  VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ---RERCF---LEPRARFYAAEIA 149

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLY------QY 273
            AL +L S  L+I++ DLKPENILL S  +  I + DFG          T        +Y
Sbjct: 150 SALGYLHS--LNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII-EVLGMP 332
           +      +PEVL   PYD  +D W LG +L E+  G P F  +N  +    I+ + L + 
Sbjct: 206 L------APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259

Query: 333 PG 334
           P 
Sbjct: 260 PN 261

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  104 bits (261), Expect = 2e-25
 Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 25/234 (10%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLE 161
           K + +Y +  LLG+GS+G+V +  D E  C+ A+KI+K KK           + E+QLL 
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61

Query: 162 KINKADIHSRYIVKLK---GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
           ++     H + +++L     +   K  + +V E     +  ++ +       +     + 
Sbjct: 62  RLR----H-KNVIQLVDVLYNEE-KQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS-----CHVGQTLYQY 273
            QL   L +L S    I+H D+KP N+LL +     +KI   G +          T    
Sbjct: 116 CQLIDGLEYLHS--QGIVHKDIKPGNLLLTTGGT--LKISALGVAEALHPFAADDTCRTS 171

Query: 274 IQSRYYRSPEVLLGI-PYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
             S  ++ PE+  G+  +    +D+WS G  L  + TG   F G N       I
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
            DL+  ML Y+P KR S   + +H +F K 
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  103 bits (260), Expect = 3e-25
 Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 20/212 (9%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK-NKKPFLNQAQIEVQLLEKINKADI 168
           + +EI   LG G+FG+V KA + E     A K+I+   +  L    +E+++L     A  
Sbjct: 19  EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL-----ATC 73

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              YIVKL G +     L ++ E      +  ++   +  G++    +   +Q+  AL F
Sbjct: 74  DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNF 132

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEV 284
           L S    IIH DLK  N+L+       I++ DFG S    +TL +   +I + Y+ +PEV
Sbjct: 133 LHS--KRIIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 188

Query: 285 LL-----GIPYDLAIDMWSLGCILVELHTGEP 311
           ++       PYD   D+WSLG  L+E+   EP
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  104 bits (261), Expect = 4e-25
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 25/259 (9%)

Query: 88  VHNDGHDDENYDYIIKHGEKF-LDRYEIDTLLGKGSFGQVV---KAFDHEEKCQVAIKII 143
           +     +     ++ +  EK    ++E+  +LG+GSFG+V    K    + +   A+K++
Sbjct: 1   MEGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60

Query: 144 KNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-----YNLY 198
           K K     + ++    +E+    +++  +IVKL   F  +  L L+ + L        L 
Sbjct: 61  K-KATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 118

Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
              +   F   +    K +  +L  AL  L S  L II+ DLKPENILL       IK+ 
Sbjct: 119 ---KEVMF---TEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDE--EGHIKLT 168

Query: 259 DFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
           DFG S       +  Y +  +  Y +PEV+    +  + D WS G ++ E+ TG   F G
Sbjct: 169 DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228

Query: 316 KNEVDQMTKII-EVLGMPP 333
           K+  + MT I+   LGMP 
Sbjct: 229 KDRKETMTMILKAKLGMPQ 247

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  102 bits (257), Expect = 6e-25
 Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 23/233 (9%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EV 157
             G   +  Y +   LG G+FG+V          +VA+KI+ N++   +   +     E+
Sbjct: 4   HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL-NRQKIRSLDVVGKIKREI 62

Query: 158 QLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTK 215
           Q L+       H  +I+KL    +      +V E +S   L++ I     HG V     +
Sbjct: 63  QNLKLFR----H-PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK---HGRVEEMEAR 114

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQY 273
           +  QQ+  A+ +       ++H DLKPEN+LL +      KI DFG S     G+ L   
Sbjct: 115 RLFQQILSAVDYCHR--HMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGEFLRTS 170

Query: 274 IQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
             S  Y +PEV+ G  Y    +D+WS G IL  L  G   F  ++      KI
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
             L++ ML  DP KR +  ++  HE+F + 
Sbjct: 239 ATLLMHMLQVDPLKRATIKDIREHEWFKQD 268

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  103 bits (258), Expect = 7e-25
 Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 37/226 (16%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
               +LGKG FGQ +K    E    + +K +       ++ FL     EV+++  +    
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK----EVKVMRCLE--- 65

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            H   ++K  G       L  + E +    L  +I++ +      +    FA+ +   +A
Sbjct: 66  -HPN-VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMA 122

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------ 280
           +L S  ++IIH DL   N L+   +   + + DFG +  +     Q    R  +      
Sbjct: 123 YLHS--MNIIHRDLNSHNCLV--RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178

Query: 281 -----------SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
                      +PE++ G  YD  +D++S G +L E+         
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  102 bits (257), Expect = 7e-25
 Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 18/208 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INK-AD 167
           + +     +GKGSFG+V K  D+  +  VAIKII      L +A+ E++ +++ I   + 
Sbjct: 22  ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQ 76

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
             S Y+ K  G +     L ++ E L   +  +L+         +       +++   L 
Sbjct: 77  CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT---ILREILKGLD 133

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPE 283
           +L S     IH D+K  N+LL       +K+ DFG +  +  T  +   ++ + ++ +PE
Sbjct: 134 YLHS--EKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 189

Query: 284 VLLGIPYDLAIDMWSLGCILVELHTGEP 311
           V+    YD   D+WSLG   +EL  GEP
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEP 217

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  103 bits (258), Expect = 8e-25
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 23/217 (10%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
             +E+  L+G G++GQV K    +     AIK++        + + E+ +L+K +    H
Sbjct: 24  GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----H 79

Query: 170 SRYIVKLKGHF------TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            R I    G F         + L LV E     ++ +LI+NT  + +         +++ 
Sbjct: 80  HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYY 279
             L+ L      +IH D+K +N+LL   + + +K++DFG S  + +T+ +   +I + Y+
Sbjct: 140 RGLSHLHQH--KVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYW 195

Query: 280 RSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEP 311
            +PEV+         YD   D+WSLG   +E+  G P
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  103 bits (259), Expect = 9e-25
 Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 32/234 (13%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKAD 167
           +D +E   +LGKGSFG+V+ A   E     A+K++K K   L    +E  + EK I    
Sbjct: 22  IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVILQDDDVECTMTEKRILSLA 80

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            +  ++ +L   F   + L  V E ++     +++    ++  F        + +A ++ 
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRF---DEARARFYAAEII 134

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLY------QY 273
            AL FL      II+ DLK +N+LL        K+ DFG        G T         Y
Sbjct: 135 SALMFLHD--KGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGICNGVTTATFCGTPDY 190

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           I      +PE+L  + Y  A+D W++G +L E+  G   F  +NE D    I+ 
Sbjct: 191 I------APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  103 bits (259), Expect = 9e-25
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK-INKAD 167
           L  +    +LGKGSFG+V+ +         A+KI+K K   +    +E  ++EK +    
Sbjct: 19  LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALP 77

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
               ++ +L   F   + L  V E ++    +Y++ +   F          +A ++   L
Sbjct: 78  GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF---KEPHAVFYAAEIAIGL 134

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG---SSCHVGQTLYQYIQSRYYRSP 282
            FL S    II+ DLK +N++L S     IKI DFG    +   G T   +  +  Y +P
Sbjct: 135 FFLQS--KGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAP 190

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-LGMPP 333
           E++   PY  ++D W+ G +L E+  G+  F G++E +    I+E  +  P 
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK 242

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  102 bits (257), Expect = 5e-24
 Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 21/232 (9%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQ 158
             G   +  Y +   LG G+FG+V          +VA+KI+  +K      + + + E+Q
Sbjct: 9   HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ 68

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHG-VSLNLTKK 216
            L+       H  +I+KL    +  + + +V E +S   L++ I     +G +    +++
Sbjct: 69  NLKLFR----H-PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK---NGRLDEKESRR 120

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLYQYI 274
             QQ+   + +       ++H DLKPEN+LL +      KI DFG S     G+ L    
Sbjct: 121 LFQQILSGVDYCHR--HMVVHRDLKPENVLLDAHMN--AKIADFGLSNMMSDGEFLRTSC 176

Query: 275 QSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
            S  Y +PEV+ G  Y    +D+WS G IL  L  G   F   +      KI
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI 228

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  101 bits (253), Expect = 6e-24
 Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 39/296 (13%)

Query: 63  YYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKF-LDRYEIDTLLGKG 121
           ++ +++  +      T ++  +          +     +  H EK  ++ +E+  +LG G
Sbjct: 6   HHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTG 65

Query: 122 SFGQVV---KAFDHEEKCQVAIKIIKNKKPFLNQAQI-----EVQLLEKINKADIHSRYI 173
           ++G+V    K   H+     A+K++K                E Q+LE I      S ++
Sbjct: 66  AYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFL 121

Query: 174 VKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           V L   F  +  L L+ + ++      +L    +   F   + +  + +  ++  AL  L
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLS---QRERF---TEHEVQIYVGEIVLALEHL 175

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS----CHVGQTLYQYIQSRYYRSPEV 284
               L II+ D+K ENILL S     + + DFG S        +  Y +  +  Y +P++
Sbjct: 176 HK--LGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231

Query: 285 LLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV-----LGMPP 333
           + G    +D A+D WSLG ++ EL TG   F+   E +   +I           P 
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  101 bits (253), Expect = 8e-24
 Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 25/240 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            D +EI   +GKGSFG+V     ++ K   A+K +  K+  + + ++     E      +
Sbjct: 14  FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-KQKCVERNEVRNVFKELQIMQGL 72

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              ++V L   F  +  + +V +LL      Y+L    +N +F        K F  +L  
Sbjct: 73  EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHF---KEETVKLFICELVM 126

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRS 281
           AL +L +    IIH D+KP+NILL       + I DF  +  +     +     ++ Y +
Sbjct: 127 ALDYLQN--QRIIHRDMKPDNILLDE--HGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182

Query: 282 PEVLL---GIPYDLAIDMWSLGCILVELHTGEPLF---SGKNEVDQMTKIIEV-LGMPPG 334
           PE+     G  Y  A+D WSLG    EL  G   +   S  +  + +       +  P  
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA 242

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 99.7 bits (249), Expect = 1e-23
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 15/206 (7%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           + +++   LG+GS+G V KA   E    VAIK +  +   L +   E+ ++         
Sbjct: 29  EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-LQEIIKEISIM-----QQCD 82

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           S ++VK  G +     L +V E     ++ ++IR  N   ++ +      Q     L +L
Sbjct: 83  SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYL 141

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ---YIQSRYYRSPEVL 285
               +  IH D+K  NILL +      K+ DFG +  +  T+ +    I + ++ +PEV+
Sbjct: 142 HF--MRKIHRDIKAGNILLNT--EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEP 311
             I Y+   D+WSLG   +E+  G+P
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKP 223

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 98.1 bits (245), Expect = 3e-23
 Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 40/253 (15%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
               L++Y +   +GKGS+G V  A++  +    A+K++ +KK  + QA    +   +  
Sbjct: 8   DCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVL-SKKKLIRQAGFPRRPPPRGT 66

Query: 165 KADIHSRY--------------IVKLKGH-----------FTWKNHLCLVFELLSY-NLY 198
           +                     I+K   H              ++HL +VFEL++   + 
Sbjct: 67  RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM 126

Query: 199 NLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII 258
            +         S +  + + Q L   + +L      IIH D+KP N+L+       IKI 
Sbjct: 127 EVPTLKPL---SEDQARFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGH--IKIA 179

Query: 259 DFGSSC---HVGQTLYQYIQSRYYRSPEVLLGI--PYD-LAIDMWSLGCILVELHTGEPL 312
           DFG S         L   + +  + +PE L      +   A+D+W++G  L     G+  
Sbjct: 180 DFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239

Query: 313 FSGKNEVDQMTKI 325
           F  +  +   +KI
Sbjct: 240 FMDERIMCLHSKI 252

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLK 432
            KDLI RML  +P+ RI    +  H +  +
Sbjct: 269 LKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 98.6 bits (246), Expect = 5e-23
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII----KNKKPFLNQAQIEVQLLEKINK 165
             +     +G GSFG V  A D      VAIK +    K           EV+ L     
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL----- 108

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
             +     ++ +G +  ++   LV E    +  +L+       +               L
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGL 167

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL 285
           A+L S   ++IH D+K  NILL       +K+ DFGS+  +      ++ + Y+ +PEV+
Sbjct: 168 AYLHS--HNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPA-NSFVGTPYWMAPEVI 222

Query: 286 LGI---PYDLAIDMWSLGCILVELHTGEP 311
           L +    YD  +D+WSLG   +EL   +P
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKP 251

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 98.3 bits (245), Expect = 5e-23
 Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 40/232 (17%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHS 170
            +   +GKG FG+V +     E+  VA+KI     ++ +  +A  E+     +       
Sbjct: 45  VLQESIGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFREA--EIYQTVML-----RH 95

Query: 171 RYIVKLKGHFTWKN----HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
             I+         N     L LV +   + +L++ +     + V++    K A      L
Sbjct: 96  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGL 152

Query: 226 AFL------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRY- 278
           A L      +  + +I H DLK +NIL+         I D G +            +   
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPNH 210

Query: 279 ------YRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
                 Y +PEVL               D++++G +  E+     +     +
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 97.8 bits (244), Expect = 5e-23
 Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 40/232 (17%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHS 170
            +   +GKG +G+V +     E   VA+KI    ++K +  +   E+     +     H 
Sbjct: 11  TLLECVGKGRYGEVWRGSWQGEN--VAVKIFSSRDEKSWFRET--ELYNTVMLR----HE 62

Query: 171 RYIVKLKGHFTWKNH----LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
             I+          H    L L+       +LY+ ++      +      +    +   L
Sbjct: 63  N-ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGL 118

Query: 226 AFL------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS--- 276
           A L      +  + +I H DLK +NIL+    +    I D G +    Q+  Q       
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ--CCIADLGLAVMHSQSTNQLDVGNNP 176

Query: 277 ----RYYRSPEVLLGIP------YDLAIDMWSLGCILVELHTGEPLFSGKNE 318
               + Y +PEVL              +D+W+ G +L E+           +
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  100 bits (250), Expect = 7e-23
 Identities = 48/238 (20%), Positives = 93/238 (39%), Gaps = 26/238 (10%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKK--PFLNQAQIEVQLLE 161
           G+    +YE+   +  G  G +  A D       V +K + +         A  E Q L 
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLA 134

Query: 162 KINKADIHSRYIVKL-----KGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTK 215
           ++     H   IV++                +V E +   +L           + +    
Sbjct: 135 EVV----HPS-IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK----LPVAEAI 185

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
            +  ++  AL++L    + +++ DLKPENI+L       +K+ID G+   +         
Sbjct: 186 AYLLEILPALSYLH--SIGLVYNDLKPENIMLT---EEQLKLIDLGAVSRINSF-GYLYG 239

Query: 276 SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           +  +++PE++   P   A D++++G  L  L    P  +G+  VD + +   VL    
Sbjct: 240 TPGFQAPEIVRTGPTV-ATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKTYD 295

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 96.3 bits (240), Expect = 5e-22
 Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 27/264 (10%)

Query: 74  SHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEID-----TLLGKGSFGQVVK 128
            ++   +     +     G ++E      +   K      +       ++G+GS+ +V+ 
Sbjct: 11  DYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLL 70

Query: 129 AFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKADIHSRYIVKLKGHFTWKNHL 186
               +     A++++K K+   +   I+    EK    +A  H  ++V L   F  ++ L
Sbjct: 71  VRLKKTDRIYAMRVVK-KELVNDDEDIDWVQTEKHVFEQASNHP-FLVGLHSCFQTESRL 128

Query: 187 CLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLK 241
             V E ++     +++    R            + ++ ++  AL +L   E  II+ DLK
Sbjct: 129 FFVIEYVNGGDLMFHMQ---RQRKL---PEEHARFYSAEISLALNYLH--ERGIIYRDLK 180

Query: 242 PENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWS 298
            +N+LL S     IK+ D+G        G T   +  +  Y +PE+L G  Y  ++D W+
Sbjct: 181 LDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA 238

Query: 299 LGCILVELHTGEPLFSGKNEVDQM 322
           LG ++ E+  G   F      D  
Sbjct: 239 LGVLMFEMMAGRSPFDIVGSSDNP 262

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 94.8 bits (236), Expect = 8e-22
 Identities = 49/233 (21%), Positives = 82/233 (35%), Gaps = 42/233 (18%)

Query: 113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKADIHS 170
           ++   +GKG +G+V       EK  VA+K+     +  +  +   E+     +       
Sbjct: 40  QMVKQIGKGRYGEVWMGKWRGEK--VAVKVFFTTEEASWFRET--EIYQTVLM-----RH 90

Query: 171 RYIVKL-----KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             I+       KG  +W   L L+ +     +LY+ +++     +      K A      
Sbjct: 91  ENILGFIAADIKGTGSWT-QLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSG 146

Query: 225 LAFL------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC-HVGQTLYQYIQS- 276
           L  L      +  + +I H DLK +NIL+         I D G +   +  T    I   
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVKFISDTNEVDIPPN 204

Query: 277 -----RYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNE 318
                + Y  PEVL            +  DM+S G IL E+           E
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 95.0 bits (237), Expect = 8e-22
 Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 22/224 (9%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEK--INKA 166
           L  +++  ++G+GS+ +V+     +     A+K++K K+   +   I+    EK    +A
Sbjct: 8   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQA 66

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLS-----YNLYNLIRNTNFHGVSLNLTKKFAQQL 221
             H  ++V L   F  ++ L  V E ++     +++    R            + ++ ++
Sbjct: 67  SNHP-FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKL---PEEHARFYSAEI 119

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS---CHVGQTLYQYIQSRY 278
             AL +L      II+ DLK +N+LL S     IK+ D+G        G T   +  +  
Sbjct: 120 SLALNYLHE--RGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 175

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQM 322
           Y +PE+L G  Y  ++D W+LG ++ E+  G   F      D  
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 92.3 bits (230), Expect = 4e-21
 Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 38/233 (16%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLL 160
           G+   +RY+I   LG G    V  A D     +VAIK I      K+  L + + EV   
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH-- 63

Query: 161 EKINKADIHSRYIVKL-------KGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHG-VSL 211
              N + +  + IV +         ++       LV E +    L   I +   HG +S+
Sbjct: 64  ---NSSQLSHQNIVSMIDVDEEDDCYY-------LVMEYIEGPTLSEYIES---HGPLSV 110

Query: 212 NLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHV 266
           +    F  Q+   +    + ++ I+H D+KP+NIL+       +KI DFG     S   +
Sbjct: 111 DTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSETSL 166

Query: 267 GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
            QT    + +  Y SPE   G   D   D++S+G +L E+  GEP F+G+  V
Sbjct: 167 TQT-NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 88.8 bits (221), Expect = 7e-20
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 34/234 (14%)

Query: 105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLL 160
                DRYE+  +LG G   +V  A D  +   VA+K+++        F  + + E Q  
Sbjct: 7   PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66

Query: 161 EKINKADIHSRY------IVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHG-VSLN 212
             +N   I + Y             +       +V E +    L +++      G ++  
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPY-------IVMEYVDGVTLRDIVHT---EGPMTPK 116

Query: 213 LTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCH 265
              +     C AL F  S +  IIH D+KP NI++     +A+K++DFG       S   
Sbjct: 117 RAIEVIADACQALNF--SHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNS 172

Query: 266 VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV 319
           V QT    I +  Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V
Sbjct: 173 VTQT-AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 57/257 (22%), Positives = 94/257 (36%), Gaps = 47/257 (18%)

Query: 109 LDRYEIDT-------LLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQL 159
            +     +       +  +G FG V KA    E   VA+KI    +K+ + N+   EV  
Sbjct: 16  TENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEY--VAVKIFPIQDKQSWQNEY--EVYS 71

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNH----LCLVFELLSY-NLYNLIRNTNFHGVSLNLT 214
           L  +         I++  G           L L+       +L + ++    + VS N  
Sbjct: 72  LPGM-----KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNEL 123

Query: 215 KKFAQQLCCALAFL--------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
              A+ +   LA+L           + +I H D+K +N+LL +       I DFG +   
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT--ACIADFGLALKF 181

Query: 267 GQTLYQYIQSRY-----YRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGK 316
                            Y +PEVL           L IDM+++G +L EL +      G 
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241

Query: 317 NEVDQMTKIIEVLGMPP 333
            + + M    E +G  P
Sbjct: 242 VD-EYMLPFEEEIGQHP 257

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 89.4 bits (222), Expect = 2e-19
 Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 45/223 (20%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQ 158
           D++E++         LG G +G+V +    +    VA+K +K      + FL +A +   
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--- 269

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
            +++I     H   +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    
Sbjct: 270 -MKEIK----HPN-LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A Q+  A+ +L     + IH +L   N L+       +K+ DFG        L + +   
Sbjct: 324 ATQISSAMEYLEK--KNFIHRNLAARNCLVGE--NHLVKVADFG--------LSRLMTGD 371

Query: 278 YYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y +            PE L    + +  D+W+ G +L E+ T
Sbjct: 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 86.9 bits (216), Expect = 2e-19
 Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 45/223 (20%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQ 158
           D++E++         LG G +G+V +    +    VA+K +K      + FL +A +   
Sbjct: 6   DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV--- 62

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
            +++I     H   +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    
Sbjct: 63  -MKEIK----HPN-LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A Q+  A+ +L     + IH DL   N L+       +K+ DFG        L + +   
Sbjct: 117 ATQISSAMEYLEK--KNFIHRDLAARNCLVGENH--LVKVADFG--------LSRLMTGD 164

Query: 278 YYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y +            PE L    + +  D+W+ G +L E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 87.6 bits (217), Expect = 3e-19
 Identities = 48/234 (20%), Positives = 83/234 (35%), Gaps = 47/234 (20%)

Query: 109 LDRYEIDTLLGKGSFGQVVKA-FDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINK 165
           LD  ++  L+G+G +G V K   D      VA+K+    N++ F+N+    +  +  +  
Sbjct: 12  LDNLKLLELIGRGRYGAVYKGSLDERP---VAVKVFSFANRQNFINEK--NIYRVPLM-- 64

Query: 166 ADIHSRYIVKL-----KGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
                  I +      +     +    LV E       +L +  + H      + + A  
Sbjct: 65  ---EHDNIARFIVGDERVTADGRMEYLLVMEYYPNG--SLXKYLSLHTSDWVSSCRLAHS 119

Query: 221 LCCALAFL-------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
           +   LA+L          + +I H DL   N+L+ +       I DFG S  +       
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT--CVISDFGLSMRLTGNRLVR 177

Query: 274 IQSRY-----------YRSPEVLLGI-------PYDLAIDMWSLGCILVELHTG 309
                           Y +PEVL G             +DM++LG I  E+   
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 85.9 bits (213), Expect = 1e-18
 Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 62/289 (21%)

Query: 80  SNKKEKKYVHNDGHDDENYDYIIKHGEKFL--DRYEID-------TLLGKGSFGQVVKA- 129
           S      +   D    EN  +    G  F   D  + +         LGKG+FG V    
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCR 61

Query: 130 ---FDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG--H 179
                      VA+K ++     + + F  + +I   L             IVK KG  +
Sbjct: 62  YDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL---------QHDNIVKYKGVCY 112

Query: 180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSII 236
              + +L L+ E L Y +L + ++    H   ++  K  ++  Q+C  + +L +     I
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGT--KRYI 167

Query: 237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS------------PEV 284
           H DL   NIL+ +  R  +KI DFG +  + Q         YY+             PE 
Sbjct: 168 HRDLATRNILVENENR--VKIGDFGLTKVLPQ------DKEYYKVKEPGESPIFWYAPES 219

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           L    + +A D+WS G +L EL T       +       + + ++G   
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTY-----IEKSKSPPAEFMRMIGNDK 263

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 53/242 (21%)

Query: 118 LGKGSFGQVVKA----FDHEEKCQVAIKIIK-----NKKPFLNQAQIEVQLLEKINKADI 168
           LGKG+FG V               VA+K ++     + + F  + +I   L         
Sbjct: 18  LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL--------- 68

Query: 169 HSRYIVKLKG--HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCC 223
               IVK KG  +   + +L L+ E L Y +L + ++    H   ++  K  ++  Q+C 
Sbjct: 69  QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICK 125

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS-- 281
            + +L +     IH DL   NIL+ +  R  +KI DFG +  + Q         +++   
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENR--VKIGDFGLTKVLPQ------DKEFFKVKE 175

Query: 282 ----------PEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM 331
                     PE L    + +A D+WS G +L EL T       +       + + ++G 
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY-----IEKSKSPPAEFMRMIGN 230

Query: 332 PP 333
             
Sbjct: 231 DK 232

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 84.2 bits (209), Expect = 3e-18
 Identities = 49/221 (22%), Positives = 88/221 (39%), Gaps = 30/221 (13%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKN--------KKPFLNQAQIEVQLL 160
              Y +  L+G+G  G V +A D   +  VA+K++          +     +A+   +L 
Sbjct: 33  FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ 92

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQ 219
           E  +   IH        G       L +   L++  +L  ++R      ++        +
Sbjct: 93  EP-HVVPIHDF------GEID--GQLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVR 141

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-----SSCHVGQTLYQYI 274
           Q+  AL    +      H D+KPENIL+ +       ++DFG     +   + Q     +
Sbjct: 142 QIGSALDA--AHAAGATHRDVKPENILVSADDF--AYLVDFGIASATTDEKLTQL-GNTV 196

Query: 275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG 315
            + YY +PE           D+++L C+L E  TG P + G
Sbjct: 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 83.2 bits (206), Expect = 7e-18
 Identities = 65/267 (24%), Positives = 100/267 (37%), Gaps = 64/267 (23%)

Query: 92  GHDDENYDYIIKHGEKFLDRYEID-------TLLGKGSFGQVVKA----FDHEEKCQVAI 140
           GH   ++           D    +       + LGKG+FG V               VA+
Sbjct: 2   GHHHHHHA----QLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAV 57

Query: 141 KIIKNKKP-----FLNQAQIEVQLLEKINKADIHSRYIVKLKG--HFTWKNHLCLVFELL 193
           K +++  P     F  + QI   L         HS +IVK +G  +   +  L LV E L
Sbjct: 58  KQLQHSGPDQQRDFQREIQILKAL---------HSDFIVKYRGVSYGPGRQSLRLVMEYL 108

Query: 194 SY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP 250
               L + ++    H   L+ ++   ++ Q+C  + +L S     +H DL   NIL+ S 
Sbjct: 109 PSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGS--RRCVHRDLAARNILVESE 163

Query: 251 KRSAIKIIDFGSSCHVGQTLYQYIQSR--YYRS------------PEVLLGIPYDLAIDM 296
               +KI DFG        L + +     YY              PE L    +    D+
Sbjct: 164 AH--VKIADFG--------LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDV 213

Query: 297 WSLGCILVELHT-GEPLFSGKNEVDQM 322
           WS G +L EL T  +   S   E  +M
Sbjct: 214 WSFGVVLYELFTYCDKSCSPSAEFLRM 240

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 82.2 bits (203), Expect = 4e-17
 Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 39/257 (15%)

Query: 63  YYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGS 122
           YY+K      L H  T      K        D     + I       +   ++  LG+G 
Sbjct: 231 YYSKHA--DGLCHRLTTVCPTSKPQTQGLAKDA----WEIPR-----ESLRLEVKLGQGC 279

Query: 123 FGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG 178
           FG+V          +VAIK +K    + + FL +AQ+  +L         H + +V+L  
Sbjct: 280 FGEVWMG-TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK-LVQLYA 329

Query: 179 HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH 237
             + +  + +V E +S  +L + ++      + L      A Q+   +A++    ++ +H
Sbjct: 330 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--MNYVH 386

Query: 238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEVLLGIPYD 291
            DL+  NIL+        K+ DFG +  +     +Y   +  +      +PE  L   + 
Sbjct: 387 RDLRAANILVGE--NLVCKVADFGLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFT 442

Query: 292 LAIDMWSLGCILVELHT 308
           +  D+WS G +L EL T
Sbjct: 443 IKSDVWSFGILLTELTT 459

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 80.5 bits (199), Expect = 4e-17
 Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 49/226 (21%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
           +RY +   +G GSFG +    D     +VAIK+  +K K P L    IE ++ + +    
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL---HIESKIYKMMQGGV 65

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                I  ++      ++  +V ELL  +L +L    +    SL      A Q+   + +
Sbjct: 66  ----GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 120

Query: 228 LSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           + S   + IH D+KP+N L+   K+   + IIDFG              ++ YR      
Sbjct: 121 IHS--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL-------------AKKYRDARTHQ 165

Query: 287 GIPYD-----------------LAI------DMWSLGCILVELHTG 309
            IPY                  L I      D+ SLG +L+  + G
Sbjct: 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 82.1 bits (203), Expect = 5e-17
 Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 35/217 (16%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQ 158
           D +EI          LG+G FG+V     +    +VAIK +K    + + FL +AQ+  +
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKK 235

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           L         H + +V+L    + +  + +V E +S  +L + ++      + L      
Sbjct: 236 LR--------HEK-LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           A Q+   +A++    ++ +H DL+  NIL+        K+ DFG +  +     +Y   +
Sbjct: 286 AAQIASGMAYVER--MNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDN--EYTARQ 339

Query: 278 YYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
             +      +PE  L   + +  D+WS G +L EL T
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 81.7 bits (202), Expect = 6e-17
 Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 42/232 (18%)

Query: 96  ENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPF 149
                  +     + R  +  +  LG G FG+V  A  ++   +VA+K +K    + + F
Sbjct: 172 SKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKPGSMSVEAF 230

Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
           L +A +   L         H + +VKL    T K  + ++ E ++  +L + +++     
Sbjct: 231 LAEANVMKTL--------QHDK-LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSK 280

Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
             L     F+ Q+   +AF+     + IH DL+  NIL+ +      KI DFG       
Sbjct: 281 QPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSA--SLVCKIADFG------- 329

Query: 269 TLYQYIQSRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            L + I+   Y +            PE +    + +  D+WS G +L+E+ T
Sbjct: 330 -LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 81.6 bits (201), Expect = 6e-17
 Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 49/226 (21%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
           +++ +   +G GSFG++    + +   +VAIK+  +K K P L     E ++   +    
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL---LYESKIYRILQGGT 63

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                I  ++      ++  LV +LL  +L +L    +   +SL      A Q+   + F
Sbjct: 64  ----GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEF 118

Query: 228 LSSPELSIIHCDLKPENILL-CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           + S   S +H D+KP+N L+    + + + IIDFG              ++ YR      
Sbjct: 119 VHS--KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL-------------AKKYRDTSTHQ 163

Query: 287 GIPYD-----------------LAI------DMWSLGCILVELHTG 309
            IPY                  L I      D+ SLG +L+    G
Sbjct: 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 80.0 bits (198), Expect = 9e-17
 Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 62/283 (21%)

Query: 63  YYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGS 122
           Y  K+K K      + R    E    ++    D       +  E   +  +    LG G+
Sbjct: 4   YKYKQKPK-----YQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGA 58

Query: 123 FGQVVKA-----FDHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKINKADIHSR 171
           FG+VV+A        +   +VA+K++K+      K+  ++    E++++  + +   H  
Sbjct: 59  FGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS----ELKIMSHLGQ---HEN 111

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNT--------NFHGVSLNLTKK----FA 218
            IV L G  T    + ++ E   Y +L N +R           F   +   + +    F+
Sbjct: 112 -IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR- 277
            Q+   +AFL+S   + IH D+   N+LL +      KI DFG        L + I +  
Sbjct: 171 SQVAQGMAFLAS--KNCIHRDVAARNVLLTNGH--VAKIGDFG--------LARDIMNDS 218

Query: 278 YYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y             +PE +    Y +  D+WS G +L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 79.3 bits (196), Expect = 1e-16
 Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 51/227 (22%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKADI 168
            + +   +G G+FG++    +      VAIK+  +K++ P L+    E +  +++     
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL---EYRFYKQLGS--- 63

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
               I ++        +  +V ELL  +L +L  +      SL      A QL   + ++
Sbjct: 64  -GDGIPQVYYFGPCGKYNAMVLELLGPSLEDL-FDLCDRTFSLKTVLMIAIQLISRMEYV 121

Query: 229 SSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL 285
            S   ++I+ D+KPEN L+    +  +  I IIDF               ++ Y  PE  
Sbjct: 122 HS--KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL-------------AKEYIDPETK 166

Query: 286 LGIPYD-----------------LAI------DMWSLGCILVELHTG 309
             IPY                  L        D+ +LG + +    G
Sbjct: 167 KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 47/228 (20%), Positives = 84/228 (36%), Gaps = 51/228 (22%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI--IKNKKPFLNQAQIEVQLLEKINKAD 167
             Y++   +G+GSFG + +  +     QVAIK    ++  P L     E +  + +    
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD---EYRTYKLLAGCT 66

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
                I  +        H  LV +LL  +L +L+        S+      A+Q+   +  
Sbjct: 67  ----GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQS 121

Query: 228 LSSPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV 284
           +     S+++ D+KP+N L+    S   + I ++DFG               ++YR P  
Sbjct: 122 IHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM-------------VKFYRDPVT 166

Query: 285 LLGIPYD-----------------LAI------DMWSLGCILVELHTG 309
              IPY                  L        D+ +LG + +    G
Sbjct: 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 37/267 (13%)

Query: 88  VHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKA---FDHEEKCQVAIKI 142
            + + H  E      +   + ++   I  + ++G G  G+V         +    VAIK 
Sbjct: 25  FYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84

Query: 143 IK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY- 195
           +K       ++ FL++A I  Q          H   I++L+G  T      +V E +   
Sbjct: 85  LKAGYTERQRRDFLSEASIMGQF--------DHPN-IIRLEGVVTRGRLAMIVTEYMENG 135

Query: 196 NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS 253
           +L   +R    H     + +     + +   + +LS   L  +H DL   N+L+ S    
Sbjct: 136 SLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSD--LGYVHRDLAARNVLVDSNL-- 188

Query: 254 AIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELH 307
             K+ DFG S  +         +   +      +PE +    +  A D+WS G ++ E+ 
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248

Query: 308 T-GEPLFSGKNEVDQMTKIIEVLGMPP 333
             GE  +      D ++ + E   +P 
Sbjct: 249 AYGERPYWNMTNRDVISSVEEGYRLPA 275

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 64/260 (24%), Positives = 100/260 (38%), Gaps = 68/260 (26%)

Query: 97  NYDYIIKHGEKFLDRYEID-------TLLGKGSFGQVVKA-----FDHEEKCQVAIKIIK 144
           NY YI      +  ++E           LG G+FG+VV+A        +    VA+K++K
Sbjct: 3   NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62

Query: 145 ------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NL 197
                  ++  ++    E+++L  +     H   IV L G  T      ++ E   Y +L
Sbjct: 63  PSAHLTEREALMS----ELKVLSYLGN---HMN-IVNLLGACTIGGPTLVITEYCCYGDL 114

Query: 198 YNLIRN------------TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLK 241
            N +R                    L L  +    F+ Q+   +AFL+S   + IH DL 
Sbjct: 115 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLA 172

Query: 242 PENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGI 288
             NILL   +    KI DFG        L + I++   Y             +PE +   
Sbjct: 173 ARNILLTHGR--ITKICDFG--------LARDIKNDSNYVVKGNARLPVKWMAPESIFNC 222

Query: 289 PYDLAIDMWSLGCILVELHT 308
            Y    D+WS G  L EL +
Sbjct: 223 VYTFESDVWSYGIFLWELFS 242

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 78.9 bits (195), Expect = 3e-16
 Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 41/283 (14%)

Query: 75  HNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKA--- 129
            N        + +V  D H  E+    +    K LD   I  D ++G G FG+V      
Sbjct: 10  GNGHLKLPGLRTFV--DPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67

Query: 130 FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK 183
              +++  VAIK +K       ++ FL +A I  Q              I++L+G  T  
Sbjct: 68  LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF---------DHPNIIRLEGVVTKS 118

Query: 184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDL 240
             + +V E +   +L + +R    H     + +     + +   + +LS   +  +H DL
Sbjct: 119 KPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSD--MGYVHRDL 173

Query: 241 KPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEVLLGIPYDLAI 294
              NIL+ S      K+ DFG    +         +R  +      SPE +    +  A 
Sbjct: 174 AARNILINSNL--VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231

Query: 295 DMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIE--VLGMPPG 334
           D+WS G +L E+ + GE  +   +  D +  + E   L  P  
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 47/223 (21%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQ 158
           D +E+          LG G FG+V   + +    +VA+K +K    +   FL +A +  Q
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           L         H R +V+L    T +  + ++ E +   +L + ++  +   +++N     
Sbjct: 65  LQ--------HQR-LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ-S 276
           A Q+   +AF+     + IH DL+  NIL+      + KI DFG        L + I+ +
Sbjct: 115 AAQIAEGMAFIEE--RNYIHRDLRAANILVSDTL--SCKIADFG--------LARLIEDN 162

Query: 277 RYYRS-----------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            Y              PE +    + +  D+WS G +L E+ T
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 39/217 (17%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQL 159
             + ++         +GKG FG V+       K  VA+K IKN    + FL +A +    
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLAEASV---- 239

Query: 160 LEKINKADIHSRYIVKLKGHFTWKN-HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           + ++     HS  +V+L G    +   L +V E ++  +L + +R+     +  +   KF
Sbjct: 240 MTQLR----HSN-LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 294

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           +  +C A+ +L     + +H DL   N+L+     +  K+ DFG +              
Sbjct: 295 SLDVCEAMEYLEG--NNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEA------SSTQD 344

Query: 278 YYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
             +      +PE L    +    D+WS G +L E+++
Sbjct: 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 44/231 (19%), Positives = 89/231 (38%), Gaps = 53/231 (22%)

Query: 109 LDRYEIDTL--LGKGSFGQVVKA-------FDHEEKCQVAIKIIKN-----KKPFLNQAQ 154
           +   ++     LG+G+F ++ K        +    + +V +K++        + F   A 
Sbjct: 5   IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
           +  +L           +++V   G     +   LV E + + +L   ++    +   +N+
Sbjct: 65  MMSKL---------SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK---NKNCINI 112

Query: 214 TKK--FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA------IKIIDFGSSCH 265
             K   A+QL  A+ FL     ++IH ++  +NILL   +         IK+ D G    
Sbjct: 113 LWKLEVAKQLAAAMHFLEE--NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG---- 166

Query: 266 VGQTLYQYIQSR-YYR------SPEVLL-GIPYDLAIDMWSLGCILVELHT 308
               +   +  +   +       PE +      +LA D WS G  L E+ +
Sbjct: 167 ----ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 77.4 bits (191), Expect = 6e-16
 Identities = 56/302 (18%), Positives = 106/302 (35%), Gaps = 57/302 (18%)

Query: 61  EVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI--DTLL 118
             Y+        +   E         Y    G    + +  +      +    +    ++
Sbjct: 2   SYYHHHHHHDYDIPTTENL-------YF--QGAMGSDPNQAVLKFTTEIHPSCVTRQKVI 52

Query: 119 GKGSFGQVVKAF----DHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADI 168
           G G FG+V K        +++  VAIK +K       +  FL +A I  Q          
Sbjct: 53  GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF--------- 103

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQQLCCAL 225
               I++L+G  +    + ++ E +    L   +R         ++ +     + +   +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGM 160

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS---- 281
            +L++  ++ +H DL   NIL+ S      K+ DFG S  +           Y  S    
Sbjct: 161 KYLAN--MNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEAT----YTTSGGKI 212

Query: 282 ------PEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIE--VLGMP 332
                 PE +    +  A D+WS G ++ E+ T GE  +   +  + M  I +   L  P
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272

Query: 333 PG 334
             
Sbjct: 273 MD 274

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 52/240 (21%)

Query: 118 LGKGSFGQVVKA----FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKAD 167
           LG+G FG+V        +      VA+K +K      ++  +  +  I   L        
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-------- 90

Query: 168 IHSRYIVKLKG--HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
            +  +I+K KG         L LV E +   +L + +     H + L     FAQQ+C  
Sbjct: 91  -YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEG 146

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR---- 280
           +A+L +     IH DL   N+LL + +   +KI DFG +  V +         YYR    
Sbjct: 147 MAYLHA--QHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPEG------HEYYRVRED 196

Query: 281 --------SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP 332
                   +PE L    +  A D+WS G  L EL T        +     TK +E++G+ 
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH-----CDSSQSPPTKFLELIGIA 251

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 57/233 (24%), Positives = 88/233 (37%), Gaps = 56/233 (24%)

Query: 110 DRYEID-------TLLGKGSFGQVVKA----FDHEEKCQVAIKIIK------NKKPFLNQ 152
           D    +         LG+G FG+V              QVA+K +K      +      +
Sbjct: 14  DPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 73

Query: 153 AQIEVQLLEKINKADIHSRYIVKLKG--HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV 209
            +I   L         +   IVK KG       N + L+ E L   +L   +     +  
Sbjct: 74  IEILRNL---------YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK---NKN 121

Query: 210 SLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            +NL +  K+A Q+C  + +L S     +H DL   N+L+ S  +  +KI DFG +  + 
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAI- 176

Query: 268 QTLYQYIQSRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
                     YY              PE L+   + +A D+WS G  L EL T
Sbjct: 177 -----ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 44/220 (20%)

Query: 109 LDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEK 162
           L R EI     LG G FG V      + +  VA+K+IK    ++  F  +AQ  ++L   
Sbjct: 5   LKREEITLLKELGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-- 61

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQ 219
                 H + +VK  G  + +  + +V E +S   L N +R+   HG  L  ++  +   
Sbjct: 62  ------HPK-LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCY 111

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY 279
            +C  +AFL S     IH DL   N L+       +K+ DFG + +V       +  +Y 
Sbjct: 112 DVCEGMAFLES--HQFIHRDLAARNCLVDRDL--CVKVSDFGMTRYV-------LDDQYV 160

Query: 280 RS-----------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            S           PEV     Y    D+W+ G ++ E+ +
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 66/274 (24%), Positives = 103/274 (37%), Gaps = 62/274 (22%)

Query: 75  HNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKA--- 129
            + +  +  E K     GH  EN  Y        + R +I     LG+G+FG+V  A   
Sbjct: 4   GSGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECH 63

Query: 130 --FDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW 182
                ++K  VA+K +K      ++ F      E +LL  +     H   IV+  G  T 
Sbjct: 64  NLLPEQDKMLVAVKALKEASESARQDFQR----EAELLTMLQ----HQH-IVRFFGVCTE 114

Query: 183 KNHLCLVFELLSY-NLYNLIRN---------TNFHGVSLNLTKK----FAQQLCCALAFL 228
              L +VFE + + +L   +R+                  L        A Q+   + +L
Sbjct: 115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 174

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR------- 280
           +   L  +H DL   N L+       +KI DFG        + + I S  YYR       
Sbjct: 175 AG--LHFVHRDLATRNCLVGQ--GLVVKIGDFG--------MSRDIYSTDYYRVGGRTML 222

Query: 281 -----SPEVLL-GIPYDLAIDMWSLGCILVELHT 308
                 PE +L    +    D+WS G +L E+ T
Sbjct: 223 PIRWMPPESILYRK-FTTESDVWSFGVVLWEIFT 255

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 35/221 (15%)

Query: 107 KFLDRYEI--DTLLGKGSFGQVVKAF----DHEEKCQVAIKIIK------NKKPFLNQAQ 154
           + L   E     +LG G+FG V K        + K  VAIK ++        K  L++A 
Sbjct: 10  RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
           +   +          + ++ +L G     + + L+ +L+ +  L + +R  +   +    
Sbjct: 70  VMASV---------DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVRE-HKDNIGSQY 118

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
              +  Q+   + +L   +  ++H DL   N+L+ +P    +KI DFG +  +G    +Y
Sbjct: 119 LLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEY 174

Query: 274 IQS------RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                    ++  + E +L   Y    D+WS G  + EL T
Sbjct: 175 HAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMT 214

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 77.3 bits (190), Expect = 2e-15
 Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 49/280 (17%)

Query: 71  AQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEI---DTLLGKGSFGQVV 127
           A+++  +          V      D      +K  + FL R  +   D  LG G+FG V 
Sbjct: 297 ARITSPDKPRPMPMDTSVFESPFSDPEE---LKDKKLFLKRDNLLIADIELGCGNFGSVR 353

Query: 128 KAF--DHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH 179
           +      +++  VAIK++K      + +  + +AQI  QL          + YIV+L G 
Sbjct: 354 QGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL---------DNPYIVRLIGV 404

Query: 180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHC 238
                 L LV E+     L+  +          N+  +   Q+   + +L   E + +H 
Sbjct: 405 CQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMKYLE--EKNFVHR 460

Query: 239 DLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS------------PEVLL 286
           +L   N+LL +  R   KI DFG S  +G          YY +            PE + 
Sbjct: 461 NLAARNVLLVN--RHYAKISDFGLSKALGA------DDSYYTARSAGKWPLKWYAPECIN 512

Query: 287 GIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI 325
              +    D+WS G  + E  + G+  +      + M  I
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 59/259 (22%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAF---DHEEKCQVAIKIIK------NKKPFLNQA 153
            +Y I         +LG+G FG+V +        EK  VA+K  K      NK+ F+++A
Sbjct: 5   PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEA 64

Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN 212
            I   L            +IVKL G    +    ++ EL  Y  L + +     +  SL 
Sbjct: 65  VIMKNL---------DHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLER---NKNSLK 111

Query: 213 LTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
           +     ++ Q+C A+A+L S  ++ +H D+   NIL+ SP    +K+ DFG        L
Sbjct: 112 VLTLVLYSLQICKAMAYLES--INCVHRDIAVRNILVASP--ECVKLGDFG--------L 159

Query: 271 YQYIQSR-YYRS-----------PEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN 317
            +YI+   YY++           PE +    +  A D+W     + E+ + G+  F    
Sbjct: 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219

Query: 318 EVDQMTKII--EVLGMPPG 334
             D +  +   + L  P  
Sbjct: 220 NKDVIGVLEKGDRLPKPDL 238

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 46/221 (20%)

Query: 109 LDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEK 162
           +D  E+     +G G FG V   +    K +VAIK I+    +++ F+ +A++ ++L   
Sbjct: 5   IDPSELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL--- 60

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQ 219
                 H + +V+L G    +  +CLV E + +  L + +R                   
Sbjct: 61  -----SHPK-LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT---QRGLFAAETLLGMCL 111

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY 279
            +C  +A+L      +IH DL   N L+       IK+ DFG        + +++    Y
Sbjct: 112 DVCEGMAYLEE--ACVIHRDLAARNCLVGE--NQVIKVSDFG--------MTRFVLDDQY 159

Query: 280 RS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            S            PEV     Y    D+WS G ++ E+ +
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 75.8 bits (187), Expect = 3e-15
 Identities = 54/245 (22%), Positives = 89/245 (36%), Gaps = 42/245 (17%)

Query: 87  YVHN-DGHDDENYDYIIKHGEKFLDRYEID----TL---LGKGSFGQVVKAFDHEEKCQV 138
            +        ++   + +   K  D++ ++     L   +G+G+FG+V       +   V
Sbjct: 85  LLSTQQPLTKKSGVVLHRAVPK--DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV 142

Query: 139 AIKIIKN------KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFEL 192
           A+K  +       K  FL +A+I  Q              IV+L G  T K  + +V EL
Sbjct: 143 AVKSCRETLPPDLKAKFLQEARILKQY---------SHPNIVRLIGVCTQKQPIYIVMEL 193

Query: 193 LSY-NLYNLIRNTNFHGVSLNLTKK--FAQQLCCALAFLSSPELSIIHCDLKPENILLCS 249
           +   +    +R     G  L +             + +L S     IH DL   N L+  
Sbjct: 194 VQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLES--KCCIHRDLAARNCLVTE 248

Query: 250 PKRSAIKIIDFGSSCHVGQTLYQYIQSRYYR------SPEVLLGIPYDLAIDMWSLGCIL 303
                +KI DFG S      +Y        +      +PE L    Y    D+WS G +L
Sbjct: 249 KN--VLKISDFGMSREEADGVY-AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305

Query: 304 VELHT 308
            E  +
Sbjct: 306 WETFS 310

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 67/309 (21%), Positives = 111/309 (35%), Gaps = 77/309 (24%)

Query: 57  KHINEVYYTKKK----RKAQLSHNETRSNKKEKKYVH-----NDGHDDENYDYIIKHGEK 107
           +    V+   K+    R+  +S   + S       V      +   D      + ++   
Sbjct: 12  QDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELP 71

Query: 108 FLDRYEID-------TLLGKGSFGQVVKA-------FDHEEKCQVAIKIIK------NKK 147
              ++E           LG+G FGQVV A          +E   VA+K++K      +  
Sbjct: 72  EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 131

Query: 148 PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN--- 203
             ++    E+++++ I K   H   I+ L G  T    L ++ E  S  NL   +R    
Sbjct: 132 DLVS----EMEMMKMIGK---HKN-IINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183

Query: 204 -------TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR 252
                           +T K       QL   + +L+S     IH DL   N+L+     
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENN- 240

Query: 253 SAIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSL 299
             +KI DFG        L + I +  YY+            +PE L    Y    D+WS 
Sbjct: 241 -VMKIADFG--------LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291

Query: 300 GCILVELHT 308
           G ++ E+ T
Sbjct: 292 GVLMWEIFT 300

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 39/217 (17%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIKN---KKPFLNQAQIEVQL 159
             + ++         +GKG FG V+       K  VA+K IKN    + FL +A +    
Sbjct: 14  SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLAEASV---- 67

Query: 160 LEKINKADIHSRYIVKLKG-HFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKF 217
           + ++     HS  +V+L G     K  L +V E ++  +L + +R+     +  +   KF
Sbjct: 68  MTQLR----HSN-LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF 122

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
           +  +C A+ +L     + +H DL   N+L+        K+ DFG +              
Sbjct: 123 SLDVCEAMEYLEG--NNFVHRDLAARNVLVSEDN--VAKVSDFGLT------KEASSTQD 172

Query: 278 YYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
             +      +PE L    +    D+WS G +L E+++
Sbjct: 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 57/247 (23%), Positives = 93/247 (37%), Gaps = 67/247 (27%)

Query: 109 LDRYEID-------TLLGKGSFGQVVKAF-----DHEEKCQVAIKIIK------NKKPFL 150
             ++E           LG+G+FGQV++A             VA+K++K        +  +
Sbjct: 19  ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 78

Query: 151 NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-HLCLVFELLSY-NLYNLIRN----- 203
           +    E+++L  I     H   +V L G  T     L ++ E   + NL   +R+     
Sbjct: 79  S----ELKILIHIGH---HLN-VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130

Query: 204 -----TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA 254
                         LT +    ++ Q+   + FL+S     IH DL   NILL       
Sbjct: 131 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKN--V 186

Query: 255 IKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSLGC 301
           +KI DFG        L + I     Y             +PE +    Y +  D+WS G 
Sbjct: 187 VKICDFG--------LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238

Query: 302 ILVELHT 308
           +L E+ +
Sbjct: 239 LLWEIFS 245

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 74.4 bits (183), Expect = 7e-15
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 56/237 (23%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS 170
           ++ +   +G G FG +  AF   +  + A  ++K +         E++  +++ K D   
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97

Query: 171 RYIVKLKG------HFTW--------KNHLCLVFELLSYNLYNLIR-NTNFHGVSLNLTK 215
           ++I + +        F          +++  +V E L  +L  +   N  F     +   
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTF---KKSTVL 154

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
           +   ++   L ++   E   +H D+K  N+LL       + + D+G              
Sbjct: 155 QLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVYLADYGL------------- 199

Query: 276 SRYYRSPEVLLGIPYDLAI-----------------------DMWSLGCILVELHTG 309
           S  Y           +                          D+  LG  ++    G
Sbjct: 200 SYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCG 256

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 73.4 bits (181), Expect = 7e-15
 Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 51/225 (22%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQ 158
             +EID         LG G FG V        +  VAIK+IK    ++  F+ +A++ + 
Sbjct: 17  GSWEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 75

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK-- 215
           L         H + +V+L G  T +  + ++ E ++   L N +R            +  
Sbjct: 76  LS--------HEK-LVQLYGVCTKQRPIFIITEYMANGCLLNYLRE---MRHRFQTQQLL 123

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
           +  + +C A+ +L S     +H DL   N L+    +  +K+ DFG        L +Y+ 
Sbjct: 124 EMCKDVCEAMEYLES--KQFLHRDLAARNCLVND--QGVVKVSDFG--------LSRYVL 171

Query: 276 SRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
              Y S            PEVL+   +    D+W+ G ++ E+++
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 73.4 bits (181), Expect = 9e-15
 Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 55/248 (22%)

Query: 110 DRYEID--------TLLGKGSFGQVVKAF--DHEEKCQVAIKIIK------NKKPFLNQA 153
            +  +           LG G+FG V +      +++  VAIK++K      + +  + +A
Sbjct: 2   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61

Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN 212
           QI  QL          + YIV+L G       L LV E+     L+  +         + 
Sbjct: 62  QIMHQL---------DNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVG---KREEIP 108

Query: 213 LTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
           ++   +   Q+   + +L   E + +H DL   N+LL +      KI DFG S  +G   
Sbjct: 109 VSNVAELLHQVSMGMKYLE--EKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGA-- 162

Query: 271 YQYIQSRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN 317
                  YY +            PE +    +    D+WS G  + E  + G+  +    
Sbjct: 163 ----DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218

Query: 318 EVDQMTKI 325
             + M  I
Sbjct: 219 GPEVMAFI 226

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 71/284 (25%)

Query: 77  ETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEID-------TLLGKGSFGQVVKA 129
           +    + + + V   G  D  Y Y+     ++  ++E          +LG G+FG+V+ A
Sbjct: 5   KQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNA 64

Query: 130 -----FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG 178
                       QVA+K++K       ++  ++    E++++ ++     H   IV L G
Sbjct: 65  TAYGISKTGVSIQVAVKMLKEKADSSEREALMS----ELKMMTQLGS---HEN-IVNLLG 116

Query: 179 HFTWKNHLCLVFELLSY-NLYNLIRN-----------------TNFHGVSLNLTKK---- 216
             T    + L+FE   Y +L N +R+                          LT +    
Sbjct: 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 176

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
           FA Q+   + FL     S +H DL   N+L+   K   +KI DFG +          +  
Sbjct: 177 FAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGK--VVKICDFGLA-------RDIMSD 225

Query: 277 RYYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
             Y             +PE L    Y +  D+WS G +L E+ +
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 60/261 (22%), Positives = 94/261 (36%), Gaps = 65/261 (24%)

Query: 88  VHNDGHDDENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAF--DHEEKCQVAIKII 143
           +    H     +         LD  +I    ++G+G+FGQV+KA       +   AIK +
Sbjct: 1   MKKHHHHHHGKNNPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM 60

Query: 144 KN------KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-N 196
           K        + F      E+++L K+     H   I+ L G    + +L L  E   + N
Sbjct: 61  KEYASKDDHRDFAG----ELEVLCKLGH---HPN-IINLLGACEHRGYLYLAIEYAPHGN 112

Query: 197 LYNLIRN----------TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKP 242
           L + +R              +  +  L+ +    FA  +   + +LS      IH DL  
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAA 170

Query: 243 ENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---YYR------------SPEVLLG 287
            NIL+        KI DFG        L     SR    Y             + E L  
Sbjct: 171 RNILVGENY--VAKIADFG--------L-----SRGQEVYVKKTMGRLPVRWMAIESLNY 215

Query: 288 IPYDLAIDMWSLGCILVELHT 308
             Y    D+WS G +L E+ +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVS 236

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 40/239 (16%), Positives = 86/239 (35%), Gaps = 57/239 (23%)

Query: 111 RYEIDTLLGKGSFGQVVKAFD--------HEEKCQVAIKI------IKNKKPFLNQAQIE 156
           ++++ +   + + G + +A            +K + ++K+      + N++ F  +A   
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKP 102

Query: 157 VQLLEKINKADIHSRYIVKLKGHFTWKN-HLCLVFELLSYNLYNLIRNTNFHGVSLNLTK 215
           +Q+ +           I    G    ++ +  LV   L  +L + +  +  H +S     
Sbjct: 103 LQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVL 162

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS------------ 263
           + A +L  AL FL   E   +H ++  ENI +    +S + +  +G +            
Sbjct: 163 QVACRLLDALEFLHENEY--VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY 220

Query: 264 ------CHVGQTLYQYI-------QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
                  H G   +  +        SR  RS             D+ SLG  +++   G
Sbjct: 221 VEGSRSPHEGDLEFISMDLHKGCGPSR--RS-------------DLQSLGYCMLKWLYG 264

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 68/259 (26%), Positives = 104/259 (40%), Gaps = 59/259 (22%)

Query: 110 DRYEID-------TLLGKGSFGQVVKA---FDHEEKCQVAIKIIK------NKKPFLNQA 153
             YEI          +G+G FG V +            VAIK  K       ++ FL +A
Sbjct: 8   RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67

Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLN 212
               Q             +IVKL G  T +N + ++ EL +   L + ++       SL+
Sbjct: 68  LTMRQF---------DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKYSLD 114

Query: 213 LTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL 270
           L     +A QL  ALA+L S     +H D+   N+L+ S     +K+ DFG        L
Sbjct: 115 LASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSND--CVKLGDFG--------L 162

Query: 271 YQYIQ-SRYYRS-----------PEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN 317
            +Y++ S YY++           PE +    +  A D+W  G  + E+   G   F G  
Sbjct: 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222

Query: 318 EVDQMTKIIE--VLGMPPG 334
             D + +I     L MPP 
Sbjct: 223 NNDVIGRIENGERLPMPPN 241

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 59/259 (22%), Positives = 93/259 (35%), Gaps = 58/259 (22%)

Query: 88  VHNDGHDDENYDYIIKHGEKFLDRYEID-------TLLGKGSFGQVVKAF-----DHEEK 135
            H+  H + NY +  K      D  E+          LG G+FG+V +       +    
Sbjct: 2   AHHHHHHNPNYCFAGK-TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSP 60

Query: 136 CQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV 189
            QVA+K +       ++  FL     E  ++ K N    H   IV+  G         ++
Sbjct: 61  LQVAVKTLPEVCSEQDELDFLM----EALIISKFN----HQN-IVRCIGVSLQSLPRFIL 111

Query: 190 FELLSY-NLYNLIRN---TNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPE 243
            EL++  +L + +R          SL +      A+ + C   +L       IH D+   
Sbjct: 112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIHRDIAAR 169

Query: 244 NILLCSPKRS-AIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIP 289
           N LL  P      KI DFG        + + I    YYR             PE  +   
Sbjct: 170 NCLLTCPGPGRVAKIGDFG--------MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221

Query: 290 YDLAIDMWSLGCILVELHT 308
           +    D WS G +L E+ +
Sbjct: 222 FTSKTDTWSFGVLLWEIFS 240

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 60/240 (25%), Positives = 95/240 (39%), Gaps = 61/240 (25%)

Query: 110 DRYEIDTLLGKGSFGQVVKA-------FDHEEKCQVAIKIIK------NKKPFLNQAQIE 156
           D+  +   LG+G+FGQVV A          +E   VA+K++K      +    ++    E
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS----E 90

Query: 157 VQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN----------TN 205
           +++++ I K   H   I+ L G  T    L ++ E  S  NL   +R             
Sbjct: 91  MEMMKMIGK---HKN-IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146

Query: 206 FHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
                  +T K       QL   + +L+S     IH DL   N+L+       +KI DFG
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS--QKCIHRDLAARNVLVTENN--VMKIADFG 202

Query: 262 SSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
                   L + I +  YY+            +PE L    Y    D+WS G ++ E+ T
Sbjct: 203 --------LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 61/252 (24%)

Query: 97  NYDYIIKHGEKFLDRYEID----TL---LGKGSFGQVVKA-----FDHEEKCQVAIKIIK 144
           N +Y         D +E+     T+   LG+GSFG V +         E + +VAIK + 
Sbjct: 5   NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 64

Query: 145 ------NKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NL 197
                  +  FLN    E  ++++ N       ++V+L G  +      ++ EL++  +L
Sbjct: 65  EAASMRERIEFLN----EASVMKEFN----C-HHVVRLLGVVSQGQPTLVIMELMTRGDL 115

Query: 198 YNLIRN------TNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCS 249
            + +R+       N      +L+K  + A ++   +A+L++     +H DL   N ++  
Sbjct: 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAE 173

Query: 250 PKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDM 296
                +KI DFG        + + I    YYR            SPE L    +    D+
Sbjct: 174 DF--TVKIGDFG--------MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223

Query: 297 WSLGCILVELHT 308
           WS G +L E+ T
Sbjct: 224 WSFGVVLWEIAT 235

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 73.7 bits (181), Expect = 3e-14
 Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 56/294 (19%)

Query: 46  RKLSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHG 105
           R ++           +          +L++NE +  +     V       E  D    + 
Sbjct: 319 RLVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYT 378

Query: 106 EKFLDRYEID-------TLLGKGSFGQVVKAF---DHEEKCQVAIKIIK------NKKPF 149
                 YEI          +G+G FG V +            VAIK  K       ++ F
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438

Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHG 208
           L +A    Q             +IVKL G  T +N + ++ EL +   L + ++      
Sbjct: 439 LQEALTMRQF---------DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RK 485

Query: 209 VSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV 266
            SL+L     +A QL  ALA+L S     +H D+   N+L+ S     +K+ DFG     
Sbjct: 486 FSLDLASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSND--CVKLGDFG----- 536

Query: 267 GQTLYQYIQ-SRYYRS-----------PEVLLGIPYDLAIDMWSLGCILVELHT 308
              L +Y++ S YY++           PE +    +  A D+W  G  + E+  
Sbjct: 537 ---LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 43/251 (17%)

Query: 108 FLDRYEI--DTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKN--------KKPFLNQAQ 154
            +   ++     LG GSFG V +        +   VA+K +K            F+ +  
Sbjct: 14  LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
               L           R +++L G       + +V EL    +L + +R    H   L  
Sbjct: 74  AMHSL---------DHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGH-FLLGT 122

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
             ++A Q+   + +L S     IH DL   N+LL +     +KI DFG    + Q    Y
Sbjct: 123 LSRYAVQVAEGMGYLES--KRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQNDDHY 178

Query: 274 IQSRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN--EVDQMTK 324
           +   + +      +PE L    +  A D W  G  L E+ T G+  + G N  ++     
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK-- 236

Query: 325 IIEVLG--MPP 333
            I+  G  +P 
Sbjct: 237 -IDKEGERLPR 246

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 72.4 bits (178), Expect = 4e-14
 Identities = 62/304 (20%), Positives = 109/304 (35%), Gaps = 69/304 (22%)

Query: 53  IKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRY 112
              +    ++  T+      + +     +         + +       + ++      R+
Sbjct: 6   HHHHHD-YDIPTTENLYFNGMGYYHHHHHHDYDIPTTENLYFQGMLAGVSEYELPEDPRW 64

Query: 113 EID-------TLLGKGSFGQVVKA-------FDHEEKCQVAIKIIK------NKKPFLNQ 152
           E+          LG+G+FGQVV A              +VA+K++K      +    ++ 
Sbjct: 65  ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS- 123

Query: 153 AQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN-------- 203
              E+++++ I K   H   I+ L G  T    L ++ E  S  NL   ++         
Sbjct: 124 ---EMEMMKMIGK---HKN-IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 176

Query: 204 --TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI 257
                H     L+ K     A Q+   + +L+S     IH DL   N+L+       +KI
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDN--VMKI 232

Query: 258 IDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSLGCILV 304
            DFG        L + I    YY+            +PE L    Y    D+WS G +L 
Sbjct: 233 ADFG--------LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 284

Query: 305 ELHT 308
           E+ T
Sbjct: 285 EIFT 288

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 35/221 (15%)

Query: 107 KFLDRYEI--DTLLGKGSFGQVVKAF----DHEEKCQVAIKIIK------NKKPFLNQAQ 154
           + L   E     +LG G+FG V K        + K  VAIK ++        K  L++A 
Sbjct: 10  RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69

Query: 155 IEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
           +   +          + ++ +L G     + + L+ +L+ +  L + +R  +   +    
Sbjct: 70  VMASV---------DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVRE-HKDNIGSQY 118

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQY 273
              +  Q+   + +L   +  ++H DL   N+L+ +P    +KI DFG +  +G    +Y
Sbjct: 119 LLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEY 174

Query: 274 IQS------RYYRSPEVLLGIPYDLAIDMWSLGCILVELHT 308
                    ++  + E +L   Y    D+WS G  + EL T
Sbjct: 175 HAEGGKVPIKWM-ALESILHRIYTHQSDVWSYGVTVWELMT 214

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 71.1 bits (175), Expect = 5e-14
 Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 61/230 (26%)

Query: 118 LGKGSFGQVVKA-----FDHEEKCQVAIKIIKN-----KKPFLNQAQIEVQLLEKINKAD 167
           LG+G+FG+V  A        ++K  VA+K +K+     +K F      E +LL  +    
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR----EAELLTNLQ--- 75

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR----------NTNFHGVSLNLTKK 216
            H   IVK  G     + L +VFE + + +L   +R          +         L   
Sbjct: 76  -HEH-IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133

Query: 217 ----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ 272
                A Q+   + +L+S     +H DL   N L+       +KI DFG        + +
Sbjct: 134 QMLHIASQIASGMVYLAS--QHFVHRDLATRNCLV-GANLL-VKIGDFG--------MSR 181

Query: 273 YIQSR-YYR------------SPEVLL-GIPYDLAIDMWSLGCILVELHT 308
            + S  YYR             PE ++    +    D+WS G IL E+ T
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVILWEIFT 230

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 32/197 (16%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP-------FLNQAQIEVQ 158
            +++   +G+G FG +  A  +            +K+  +          F  +A    Q
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 159 LLEKINKADIHSRYIVKLKGH----FTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLT 214
           + + I    +    + K  G        K++  ++ +    +L  +    N    S    
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIY-EANAKRFSRKTV 154

Query: 215 KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI 274
            + + ++   L ++   E   +H D+K  N+LL       + ++D+G             
Sbjct: 155 LQLSLRILDILEYIHEHEY--VHGDIKASNLLLNYKNPDQVYLVDYGL------------ 200

Query: 275 QSRYYRSPEVLLGIPYD 291
            +  Y    V      D
Sbjct: 201 -AYRYCPEGVHKAYAAD 216

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 62/300 (20%), Positives = 101/300 (33%), Gaps = 58/300 (19%)

Query: 48  LSVDLIKTYKHINEVYYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEK 107
           +S      +   +         +  +         K  K   +    D N +Y       
Sbjct: 1   MSYYHHHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTS 60

Query: 108 FL-DRYEID----TL---LGKGSFGQVVKAF-----DHEEKCQVAIKIIK------NKKP 148
            + D  E+     TL   LG G+FG+V +       +     QVA+K +       ++  
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120

Query: 149 FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN---T 204
           FL     E  ++ K N    H   IV+  G         ++ EL++  +L + +R     
Sbjct: 121 FLM----EALIISKFN----HQN-IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171

Query: 205 NFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFG 261
                SL +      A+ + C   +L       IH D+   N LL  P      KI DFG
Sbjct: 172 PSQPSSLAMLDLLHVARDIACGCQYLEE--NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229

Query: 262 SSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
                   + + I    YYR             PE  +   +    D WS G +L E+ +
Sbjct: 230 --------MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 71.2 bits (175), Expect = 8e-14
 Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 45/224 (20%)

Query: 109 LDRYEI--DTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKN------KKPFLNQAQIE 156
               E+    +LG G FG V K          K  V IK+I++       +   +     
Sbjct: 10  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69

Query: 157 VQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK 215
             L            +IV+L G     + L LV + L   +L + +R  +   +   L  
Sbjct: 70  GSL---------DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLL 118

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
            +  Q+   + +L   E  ++H +L   N+LL SP  S +++ DFG +  +         
Sbjct: 119 NWGVQIAKGMYYLE--EHGMVHRNLAARNVLLKSP--SQVQVADFGVADLL------PPD 168

Query: 276 SRYYRS-----------PEVLLGIPYDLAIDMWSLGCILVELHT 308
            +                E +    Y    D+WS G  + EL T
Sbjct: 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 75/253 (29%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAF-----DHEEKCQVAIKIIK------NKKPFLN 151
            ++E           LG+G FG+VVKA             VA+K++K        +  L+
Sbjct: 16  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75

Query: 152 QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRN------- 203
               E  +L+++N    H   ++KL G  +    L L+ E   Y +L   +R        
Sbjct: 76  ----EFNVLKQVN----HPH-VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126

Query: 204 -----------TNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLC 248
                      +  H     LT      FA Q+   + +L+   + ++H DL   NIL+ 
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE--MKLVHRDLAARNILVA 184

Query: 249 SPKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAID 295
             +   +KI DFG        L + +     Y             + E L    Y    D
Sbjct: 185 EGR--KMKISDFG--------LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234

Query: 296 MWSLGCILVELHT 308
           +WS G +L E+ T
Sbjct: 235 VWSFGVLLWEIVT 247

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 47/260 (18%), Positives = 93/260 (35%), Gaps = 61/260 (23%)

Query: 89  HNDGHDDENYDYIIKHGEKFLDRYEID-------TLLGKGSFGQVVKAF---DHEEKCQV 138
           H+  H         +  +  L+   ID        +LG+G FG V++     +     +V
Sbjct: 6   HHHHHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKV 65

Query: 139 AIKIIKN-------KKPFLNQAQIEVQLLEKINKADIHSRYIVKL-----KGHFTWKNHL 186
           A+K +K         + FL+    E   ++  +    H   +++L     +         
Sbjct: 66  AVKTMKLDNSSQREIEEFLS----EAACMKDFS----HPN-VIRLLGVCIEMSSQGIPKP 116

Query: 187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLK 241
            ++   + Y +L+  +  +       ++  +    F   +   + +LS+   + +H DL 
Sbjct: 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN--RNFLHRDLA 174

Query: 242 PENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-YYR------------SPEVLLGI 288
             N +L       + + DFG        L + I S  YYR            + E L   
Sbjct: 175 ARNCMLRDDM--TVCVADFG--------LSKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224

Query: 289 PYDLAIDMWSLGCILVELHT 308
            Y    D+W+ G  + E+ T
Sbjct: 225 VYTSKSDVWAFGVTMWEIAT 244

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 49/233 (21%)

Query: 102 IKHGEKFLDRYEI---DTLLGKGSFGQVVKAF--DHEEKCQVAIKIIKN-------KKPF 149
           I+  E +LDR  +   D  LG G+FG V K +    +    VA+KI+KN       K   
Sbjct: 6   IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL 65

Query: 150 LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYN-LIRNTNFH 207
           L +A +  QL          + YIV++ G         LV E+     L   L +N +  
Sbjct: 66  LAEANVMQQL---------DNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVK 115

Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
             ++    +   Q+   + +L     + +H DL   N+LL +      KI DFG S  + 
Sbjct: 116 DKNI---IELVHQVSMGMKYLEE--SNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALR 168

Query: 268 QTLYQYIQSRYYRS------------PEVLLGIPYDLAIDMWSLGCILVELHT 308
                     YY++            PE +    +    D+WS G ++ E  +
Sbjct: 169 A------DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 62/241 (25%)

Query: 109 LDRYEID-------TLLGKGSFGQVVKAF---DHEEKCQVAIKIIK-------NKKPFLN 151
           L+   I         +LGKG FG V +A    +     +VA+K++K       + + FL 
Sbjct: 15  LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74

Query: 152 QAQIEVQLLEKINKADIHSRYIVKLKG------HFTWKNHLCLVFELLSY-NLYNLIRNT 204
               E   +++ +    H   + KL G               ++   + + +L+  +  +
Sbjct: 75  ----EAACMKEFD----HPH-VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS 125

Query: 205 NFHGVSLNLTKK----FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
                  NL  +    F   + C + +LSS   + IH DL   N +L       + + DF
Sbjct: 126 RIGENPFNLPLQTLVRFMVDIACGMEYLSS--RNFIHRDLAARNCMLAEDM--TVCVADF 181

Query: 261 GSSCHVGQTLYQYIQSR-YYR------------SPEVLLGIPYDLAIDMWSLGCILVELH 307
           G        L + I S  YYR            + E L    Y +  D+W+ G  + E+ 
Sbjct: 182 G--------LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

Query: 308 T 308
           T
Sbjct: 234 T 234

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 68.2 bits (167), Expect = 5e-13
 Identities = 26/227 (11%), Positives = 52/227 (22%), Gaps = 38/227 (16%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ--LLEKINKAD 167
            RY +    G     Q  +A D     QVA+  +    P        +Q  L   +  + 
Sbjct: 31  GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVD---PQGVLPDDVLQETLSRTLRLSR 87

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
           I    + ++      +    +V E +   +L  +         S     +  Q L  A  
Sbjct: 88  IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD----TSPSPVGAIRAMQSLAAAAD 143

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
              +    +      P  + +       + +                             
Sbjct: 144 A--AHRAGVALSIDHPSRVRVSI--DGDVVLAYPA-----------------TMPDA--- 179

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
               +   D+  +G  L  L               +          P
Sbjct: 180 ----NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 65.9 bits (161), Expect = 5e-12
 Identities = 51/269 (18%), Positives = 91/269 (33%), Gaps = 49/269 (18%)

Query: 95  DENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKN---- 145
           +      ++H         +  + ++G+G FG V       +  +K   A+K +      
Sbjct: 72  NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI 131

Query: 146 --KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLI 201
                FL +  I           D     ++ L G          +V   + + +L N I
Sbjct: 132 GEVSQFLTEGII---------MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

Query: 202 RNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
           RN      +  +     F  Q+   + FL+S     +H DL   N +L       +K+ D
Sbjct: 183 RN---ETHNPTVKDLIGFGLQVAKGMKFLAS--KKFVHRDLAARNCMLDEKF--TVKVAD 235

Query: 260 FGSSCHVGQTLYQYIQSRYYR-----------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           FG +  +    +       +            + E L    +    D+WS G +L EL T
Sbjct: 236 FGLARDMYDKEFD----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

Query: 309 -GEPLFSGKNEVDQMTKIIE--VLGMPPG 334
            G P +   N  D    +++   L  P  
Sbjct: 292 RGAPPYPDVNTFDITVYLLQGRRLLQPEY 320

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 62/239 (25%)

Query: 110 DRYEIDTLLGKGSFGQVVKA-----FDHEEKCQVAIKIIKN------KKPFLNQAQIEVQ 158
                   LG+  FG+V K         E+   VAIK +K+      ++ F +    E  
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH----EAM 64

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFE------LLSY-------NLYNLIRNTN 205
           L  ++     H   +V L G  T    L ++F       L  +       +      +  
Sbjct: 65  LRARLQ----HPN-VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119

Query: 206 FHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
               +L          Q+   + +LSS    ++H DL   N+L+   K + +KI D G  
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSS--HHVVHKDLATRNVLV-YDKLN-VKISDLG-- 173

Query: 264 CHVGQTLYQYIQSR-YYR------------SPEVLL-GIPYDLAIDMWSLGCILVELHT 308
                 L++ + +  YY+            +PE ++ G  + +  D+WS G +L E+ +
Sbjct: 174 ------LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWEVFS 225

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 65.4 bits (160), Expect = 7e-12
 Identities = 61/294 (20%), Positives = 105/294 (35%), Gaps = 77/294 (26%)

Query: 63  YYTKKKRKAQLSHNETRSNKKEKKYVHNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGS 122
             T     ++L  +    N   ++          +        E   +  E    +G+G+
Sbjct: 7   AVTLTTLPSELLLDRLHPNPMYQRMPLLLNPKLLSL-------EYPRNNIEYVRDIGEGA 59

Query: 123 FGQVVKA-----FDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHSR 171
           FG+V +A       +E    VA+K++K       +  F      E  L+ + +    +  
Sbjct: 60  FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR----EAALMAEFD----NPN 111

Query: 172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTK--------------- 215
            IVKL G       +CL+FE ++Y +L   +R+ + H V                     
Sbjct: 112 -IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 216 -------KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
                    A+Q+   +A+LS      +H DL   N L+       +KI DFG       
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATRNCLVGENM--VVKIADFG------- 219

Query: 269 TLYQYIQSR-YYR------------SPEVLL-GIPYDLAIDMWSLGCILVELHT 308
            L + I S  YY+             PE +     Y    D+W+ G +L E+ +
Sbjct: 220 -LSRNIYSADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFS 271

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 46/244 (18%), Positives = 82/244 (33%), Gaps = 54/244 (22%)

Query: 95  DENYDYIIKHGEKFLDRYEI--DTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKN---- 145
           +      ++H         +  + ++G+G FG V       +  +K   A+K +      
Sbjct: 8   NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI 67

Query: 146 --KKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH-LCLVFELLSY-NLYNLI 201
                FL +  I                 ++ L G          +V   + + +L N I
Sbjct: 68  GEVSQFLTEGIIMKDF---------SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

Query: 202 RNTNFHGVSLNLTK--KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
           RN      +  +     F  Q+   + +L+S     +H DL   N +L       +K+ D
Sbjct: 119 RN---ETHNPTVKDLIGFGLQVAKGMKYLAS--KKFVHRDLAARNCMLDEKF--TVKVAD 171

Query: 260 FGSSCHVGQTLYQYIQSR-YYR--------------SPEVLLGIPYDLAIDMWSLGCILV 304
           FG        L + +  + YY               + E L    +    D+WS G +L 
Sbjct: 172 FG--------LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 223

Query: 305 ELHT 308
           EL T
Sbjct: 224 ELMT 227

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 48/224 (21%), Positives = 80/224 (35%), Gaps = 52/224 (23%)

Query: 113 EIDTLLGKGSFGQVVKAF---DHEEKCQVAIKIIKN------KKPFLNQAQIEVQLLEKI 163
             D ++GKG FG V         + + Q AIK +         + FL +  +    +  +
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLL----MRGL 79

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCL-VFELLSY-NLYNLIRNTNFHGVSLNLTK--KFAQ 219
           N    H   ++ L G       L   +   + + +L   IR+      +  +     F  
Sbjct: 80  N----HPN-VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGL 131

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-Y 278
           Q+   + +L+      +H DL   N +L       +K+ DFG        L + I  R Y
Sbjct: 132 QVARGMEYLAE--QKFVHRDLAARNCMLDESF--TVKVADFG--------LARDILDREY 179

Query: 279 YR--------------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
           Y               + E L    +    D+WS G +L EL T
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 57.2 bits (137), Expect = 3e-09
 Identities = 44/254 (17%), Positives = 73/254 (28%), Gaps = 64/254 (25%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI- 168
           ++ +    +G+G FG+V +         VAIKII  + P L     +    E + +  I 
Sbjct: 20  EKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77

Query: 169 ------------HSRYIVKLKGHFTWKN-------------------------------- 184
                        +   + L      +                                 
Sbjct: 78  KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137

Query: 185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN 244
            + L FE    +L  +    +    SL   K    QL  +LA   +  L   H DL   N
Sbjct: 138 FIVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEA-SLRFEHRDLHWGN 192

Query: 245 ILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILV 304
           +LL       +     G S  +     Q               I Y L+        +  
Sbjct: 193 VLLKKTSLKKLHYTLNGKSSTIPSCGLQVSI------------IDYTLSRLERDGIVVFC 240

Query: 305 ELHTGEPLFSGKNE 318
           ++   E LF+G  +
Sbjct: 241 DVSMDEDLFTGDGD 254

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 30/159 (18%)

Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-----KPFLNQAQIEVQLLEKINKADIH 169
             L+G G FG+V K    +   +VA+K    +     + F      E++ L         
Sbjct: 44  KFLIGHGVFGKVYKGVLRDGA-KVALKRRTPESSQGIEEFET----EIETLSFC-----R 93

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA---- 224
             ++V L G    +N + L+++ +   NL   +  ++   +S++    + Q+L       
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS----WEQRLEICIGAA 149

Query: 225 --LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG 261
             L +L +   +IIH D+K  NILL        KI DFG
Sbjct: 150 RGLHYLHTR--AIIHRDVKSINILL-DENFVP-KITDFG 184

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 32/160 (20%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIK------NKKPFLNQAQIEVQLLEKINKADIHS 170
           +LG+G FG+V K    +    VA+K +K       +  F      EV+++     +    
Sbjct: 37  ILGRGGFGKVYKGRLADGT-LVAVKRLKEERTQGGELQFQT----EVEMI-----SMAVH 86

Query: 171 RYIVKLKGHFTWKNHLCLVFELLSYN-LYNLIRNTNFHGVSLNLT--KKFAQQLCCALAF 227
           R +++L+G         LV+  ++   + + +R        L+    ++ A      LA+
Sbjct: 87  RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146

Query: 228 L---SSPELSIIHCDLKPENILL---CSPKRSAIKIIDFG 261
           L     P   IIH D+K  NILL              DFG
Sbjct: 147 LHDHCDP--KIIHRDVKAANILLDEEFEAVVG-----DFG 179

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 42/209 (20%), Positives = 73/209 (34%), Gaps = 29/209 (13%)

Query: 110 DRYEID-------TLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNK--KPFLNQAQI 155
            ++E           LG+G+FGQV++A             VA+K++K             
Sbjct: 15  SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74

Query: 156 EVQLLEKINKADIHSRYIVKLKGHFT-WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNL 213
           E+++L  I     H   +V L G  T     L ++ E   + NL   +R+     V    
Sbjct: 75  ELKILIHIGH---H-LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT 130

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVGQTLYQ 272
                +Q            +  I  DLK     + S + SA    ++  S   V +    
Sbjct: 131 KGARFRQ--------GKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAP 182

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGC 301
               + + + E L+   + +A  M  L  
Sbjct: 183 EDLYKDFLTLEHLICYSFQVAKGMEFLAS 211

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 216 KFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ 275
            ++ Q+   + FL+S     IH DL   NILL       +KI DFG +  + +    Y++
Sbjct: 197 CYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKN--VVKICDFGLARDIYKDPD-YVR 251

Query: 276 SRYYR------SPEVLLGIPYDLAIDMWSLGCILVELHT 308
               R      +PE +    Y +  D+WS G +L E+ +
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 55/214 (25%), Positives = 86/214 (40%), Gaps = 38/214 (17%)

Query: 115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINK 165
              +G+G FG V K + +     VA+K +              F      E++++     
Sbjct: 36  GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQ----EIKVM----- 84

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYN--LYNLIRNTNFHGVSLNLTKKFAQQLCC 223
           A      +V+L G  +  + LCLV+  +     L  L        +S ++  K AQ    
Sbjct: 85  AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144

Query: 224 ALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHVGQTLYQYIQSR--- 277
            + FL   E   IH D+K  NILL      K S     DFG +    +     + SR   
Sbjct: 145 GINFLH--ENHHIHRDIKSANILLDEAFTAKIS-----DFGLARASEKFAQTVMTSRIVG 197

Query: 278 -Y-YRSPEVLLGIPYDLAIDMWSLGCILVELHTG 309
              Y +PE L G     + D++S G +L+E+ TG
Sbjct: 198 TTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	437
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.89
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.86
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.29
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.14
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.06
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.03
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.6
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.48
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.47
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.3
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.3
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.18
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.11
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.09
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.65
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.58
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.56
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.46
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.42
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.29
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.23
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.22
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.13
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.13
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.84
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.8
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.06
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.01
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.71
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.26
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	82.35
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	81.76

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.5e-60  Score=474.58  Aligned_cols=348  Identities=70%  Similarity=1.195  Sum_probs=314.0

Q ss_pred             CCCCCCCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhh-cC
Q psy11727         89 HNDGHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-AD  167 (437)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~-~~  167 (437)
                      .+.+.++..+++.+..++.+.++|++.+.||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+ .+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~  112 (382)
T 2vx3_A           33 YNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT  112 (382)
T ss_dssp             BGGGTBCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             CcCCcCCCCCcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhccc
Confidence            34456677788899999999999999999999999999999999999999999998666666778889999998874 45


Q ss_pred             CCCCcEEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       168 ~~h~~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      +.|++|+++++++...+++|+|||+++++|.+++......++++..++.++.||+.||.|||+++.|||||||||+|||+
T Consensus       113 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll  192 (382)
T 2vx3_A          113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL  192 (382)
T ss_dssp             GGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEE
T ss_pred             ccceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEE
Confidence            56778999999999999999999999999999998877677999999999999999999999866799999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE  327 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~  327 (437)
                      +.+.++.+||+|||+|+.........+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+..+.+
T Consensus       193 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~  272 (382)
T 2vx3_A          193 CNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE  272 (382)
T ss_dssp             SSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             ecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            76678889999999999888777788999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCChhhhccCCccchhhcccCCCcceeccccccc-cccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTR-KERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       328 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      ..+.|+..+++..+....+|..++++.|.+....+.. ....|..+.+..++....+.|.+++.++.++..++...+.+|
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  352 (382)
T 2vx3_A          273 VLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDL  352 (382)
T ss_dssp             HHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHH
T ss_pred             HhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHH
Confidence            9999999999999999999999999999877665543 456677888999999999999999999999999999999999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcCCCC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      |.+||++||.+|||++|||+||||++..+|
T Consensus       353 i~~mL~~dP~~Rpta~e~L~hp~f~~~~~e  382 (382)
T 2vx3_A          353 ILRMLDYDPKTRIQPYYALQHSFFKKTADE  382 (382)
T ss_dssp             HHHHTCSCTTTSCCHHHHTTSGGGCC----
T ss_pred             HHHhcCCChhhCCCHHHHhcCcccccCCCC
Confidence            999999999999999999999999998764

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.6e-61  Score=463.43  Aligned_cols=255  Identities=29%  Similarity=0.457  Sum_probs=220.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|+++.+++.||||++.+.    ......+.+|+.+++.+     .|||||+++++|++++
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCC
Confidence            46799999999999999999999999999999999642    22345677888888766     7999999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|||||||.| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~--~IiHRDlKPeNILl--~~~g~vKl~DFGla  179 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK--GIIHRDLKPENILL--NEDMHIQITDFGTA  179 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCHHHeEE--cCCCCEEEEEcCCc
Confidence            99999999965 8999998763  599999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCC-----ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        264 CHVGQ-----TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       264 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +....     ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+++.+|....-..|..   
T Consensus       180 ~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~---  256 (311)
T 4aw0_A          180 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK---  256 (311)
T ss_dssp             EECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT---
T ss_pred             eecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc---
Confidence            87632     2346799999999999999999999999999999999999999999999988888886632111100   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                              .    ...++|||.+||+.||.+|
T Consensus       257 --------------------------------------------------------~----s~~~~dli~~lL~~dp~~R  276 (311)
T 4aw0_A          257 --------------------------------------------------------F----FPKARDLVEKLLVLDATKR  276 (311)
T ss_dssp             --------------------------------------------------------C----CHHHHHHHHHHSCSSGGGS
T ss_pred             --------------------------------------------------------c----CHHHHHHHHHHccCCHhHC
Confidence                                                                    0    0157899999999999999


Q ss_pred             CCHHH------HhcCCCcCcCCCCC
Q psy11727        419 ISPTN------VLRHEFFLKHSVDN  437 (437)
Q Consensus       419 ~t~~e------~l~Hp~~~~~~~~~  437 (437)
                      ||++|      +++||||++.++++
T Consensus       277 ~t~~e~~~~~~i~~Hp~F~~idw~~  301 (311)
T 4aw0_A          277 LGCEEMEGYGPLKAHPFFESVTWEN  301 (311)
T ss_dssp             TTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             cChHHHcCCHHHHCCCCcCCCCHHH
Confidence            99998      58999999988764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.1e-60  Score=463.53  Aligned_cols=254  Identities=24%  Similarity=0.393  Sum_probs=218.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||++.... .....+.+|+.+++.+     .|||||+++++|++++++|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            357999999999999999999999999999999996432 2345677899999887     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||||||+| +|.+++...   .+++..++.|+.||+.||+|||++  |||||||||+||||  +.++.+||+|||+|+..
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl--~~~g~vKl~DFGla~~~  220 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIKSDSILL--THDGRVKLSDFGFCAQV  220 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTCCEEECCCTTCEEC
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--CcccccCCHHHEEE--CCCCCEEEecCcCceec
Confidence            99999966 788888764   489999999999999999999964  89999999999999  77889999999999876


Q ss_pred             CC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|.........         
T Consensus       221 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~---------  291 (346)
T 4fih_A          221 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK---------  291 (346)
T ss_dssp             CSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCS---------
T ss_pred             CCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC---------
Confidence            43   345679999999999999999999999999999999999999999999998888877653211100         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                        .+..                                                 ....++|||.+||+.||.+|||++|
T Consensus       292 --~~~~-------------------------------------------------~s~~~~dli~~~L~~dP~~R~ta~e  320 (346)
T 4fih_A          292 --NLHK-------------------------------------------------VSPSLKGFLDRLLVRDPAQRATAAE  320 (346)
T ss_dssp             --CGGG-------------------------------------------------SCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             --cccc-------------------------------------------------CCHHHHHHHHHHcCCChhHCcCHHH
Confidence              0000                                                 0125799999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +|+||||++..
T Consensus       321 ~l~Hp~~~~~~  331 (346)
T 4fih_A          321 LLKHPFLAKAG  331 (346)
T ss_dssp             HTTCGGGGGCC
T ss_pred             HhcCHhhcCCC
Confidence            99999998753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.1e-60  Score=453.74  Aligned_cols=250  Identities=30%  Similarity=0.437  Sum_probs=203.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+|+.||||++....    .....+.+|+.+++.+     .|||||+++++|++++
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~   86 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKD   86 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECC
Confidence            478999999999999999999999999999999996432    2234677899999887     6899999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .+||||||++|+|.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+  ++++.+||+|||+|+
T Consensus        87 ~~~ivmEy~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~--~IiHRDiKP~NILl--~~~~~vkl~DFGla~  160 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH--KIVHRDLKPENLLL--DEHLNVKIADFGLSN  160 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCTTTEEE--CTTCCEEECCSSCC-
T ss_pred             EEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCChHHeEE--CCCCCEEEeecCCCe
Confidence            99999999999999998775  3599999999999999999999964  89999999999999  778899999999997


Q ss_pred             ecCC--ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQ--TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....  ...+.+||+.|+|||++.+..| +.++|||||||++|+|+||++||.+.+....+..+....-..|..      
T Consensus       161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~------  234 (275)
T 3hyh_A          161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF------  234 (275)
T ss_dssp             --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------
T ss_pred             ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCC------
Confidence            6543  3346789999999999999886 579999999999999999999999998888877776532111100      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                               ....+++||.+||+.||.+|||+
T Consensus       235 ---------------------------------------------------------~s~~~~~li~~~L~~dP~~R~s~  257 (275)
T 3hyh_A          235 ---------------------------------------------------------LSPGAAGLIKRMLIVNPLNRISI  257 (275)
T ss_dssp             ---------------------------------------------------------SCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             ---------------------------------------------------------CCHHHHHHHHHHccCChhHCcCH
Confidence                                                                     00157899999999999999999


Q ss_pred             HHHhcCCCcCc
Q psy11727        422 TNVLRHEFFLK  432 (437)
Q Consensus       422 ~e~l~Hp~~~~  432 (437)
                      +|+++||||+.
T Consensus       258 ~eil~hpw~k~  268 (275)
T 3hyh_A          258 HEIMQDDWFKV  268 (275)
T ss_dssp             HHHHHCHHHHT
T ss_pred             HHHHcCccccc
Confidence            99999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.4e-60  Score=466.68  Aligned_cols=254  Identities=26%  Similarity=0.412  Sum_probs=213.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|++++.||+|+||+||+|++..+|+.||||++....   .....+.+|+.++..+     .|||||+++++|++++.
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-----KHPNIVQYRESFEENGS   97 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-----CCCCCCcEEEEEEECCE
Confidence            478999999999999999999999999999999997442   2234567888888887     78999999999999999


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|||||||+ |+|.+++.......+++..++.|+.||+.||+|||++  |||||||||+||||  +.++.+||+|||+|+
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl--~~~g~vKl~DFGla~  173 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR--KILHRDIKSQNIFL--TKDGTVQLGDFGIAR  173 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--TCEETTCCGGGEEE--CTTCCEEECSTTEES
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCCHHHEEE--CCCCCEEEcccccce
Confidence            999999996 4899999876656689999999999999999999964  89999999999999  678899999999998


Q ss_pred             ecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .....   ..+.+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+..+.+.+|......+...      
T Consensus       174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~------  247 (350)
T 4b9d_A          174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL------  247 (350)
T ss_dssp             CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCT------
T ss_pred             eecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCc------
Confidence            76543   345789999999999999999999999999999999999999999999988888886632111000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                              .....+.+||.+||+.||.+|||+
T Consensus       248 --------------------------------------------------------~~s~~~~~li~~~L~~dP~~R~s~  271 (350)
T 4b9d_A          248 --------------------------------------------------------HYSYDLRSLVSQLFKRNPRDRPSV  271 (350)
T ss_dssp             --------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             --------------------------------------------------------cCCHHHHHHHHHHccCChhHCcCH
Confidence                                                                    000157899999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      +|+|+||||++.
T Consensus       272 ~e~l~hp~~~~~  283 (350)
T 4b9d_A          272 NSILEKGFIAKR  283 (350)
T ss_dssp             HHHHTSHHHHTT
T ss_pred             HHHhcCHHhhcC
Confidence            999999999763

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.4e-59  Score=465.59  Aligned_cols=254  Identities=24%  Similarity=0.393  Sum_probs=218.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|++.+.||+|+||+||+|+++.+|+.||||++.... .....+.+|+.+++.+     .|||||+++++|.+.+++|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCCCceEEEEEECCEEE
Confidence            467999999999999999999999999999999997443 3345678899999887     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||||||+| +|.+++...   .+++..++.|+.||+.||+|||++  |||||||||+||||  +.+|.+||+|||+|...
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~--~IiHRDiKp~NILl--~~~g~vKl~DFGla~~~  297 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ--GVIHRDIKSDSILL--THDGRVKLSDFGFCAQV  297 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSTTTEEE--CTTCCEEECCCTTCEEC
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC--CeecccCCHHHEEE--cCCCCEEEecCccceEC
Confidence            99999965 788888754   489999999999999999999964  89999999999999  77889999999999876


Q ss_pred             CC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|.........         
T Consensus       298 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~---------  368 (423)
T 4fie_A          298 SKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK---------  368 (423)
T ss_dssp             CSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS---------
T ss_pred             CCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCc---------
Confidence            43   345679999999999999999999999999999999999999999999998888877552110000         


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                        .+..                                                 ....+++||.+||+.||.+|||++|
T Consensus       369 --~~~~-------------------------------------------------~s~~~~dli~~~L~~dP~~R~ta~e  397 (423)
T 4fie_A          369 --NLHK-------------------------------------------------VSPSLKGFLDRLLVRDPAQRATAAE  397 (423)
T ss_dssp             --CTTS-------------------------------------------------SCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             --cccc-------------------------------------------------CCHHHHHHHHHHcCCChhHCcCHHH
Confidence              0000                                                 0125799999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +|+||||++..
T Consensus       398 ll~Hp~~~~~~  408 (423)
T 4fie_A          398 LLKHPFLAKAG  408 (423)
T ss_dssp             HTTCGGGGGCC
T ss_pred             HhcCHHhcCCC
Confidence            99999998753

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.9e-59  Score=451.09  Aligned_cols=252  Identities=28%  Similarity=0.431  Sum_probs=208.8

Q ss_pred             cCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|++.+.||+|+||+||+|++.   .+++.||||+++...   ....++.+|+.++..     +.|||||+++++|+++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~-----l~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-----VNHPFIVKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCC-----CCCTTEECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHH-----CCCCCCCeEEEEEEEC
Confidence            57999999999999999999874   468899999997432   122345556666544     4899999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+|||||||+| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl--~~~g~vKl~DFGl  172 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL--GIIYRDLKPENILL--DEEGHIKLTDFGL  172 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEE--CTTSCEEEESSEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCCCHHHeEE--cCCCCEEeccccc
Confidence            999999999965 8999998764  599999999999999999999964  89999999999999  7788999999999


Q ss_pred             ceecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        263 SCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       263 s~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      |+...   ....+.+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+..+.+.+|....-..|..    
T Consensus       173 a~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~----  248 (304)
T 3ubd_A          173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----  248 (304)
T ss_dssp             EEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT----
T ss_pred             ceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCc----
Confidence            97652   23456789999999999999999999999999999999999999999999988888886532111100    


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                 ....+.+||.+||+.||.+||
T Consensus       249 -----------------------------------------------------------~s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          249 -----------------------------------------------------------LSPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             -----------------------------------------------------------SCHHHHHHHHHHTCSSGGGST
T ss_pred             -----------------------------------------------------------CCHHHHHHHHHHcccCHHHCC
Confidence                                                                       001578999999999999999


Q ss_pred             C-----HHHHhcCCCcCcCCC
Q psy11727        420 S-----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 t-----~~e~l~Hp~~~~~~~  435 (437)
                      |     ++|+++||||+..++
T Consensus       270 ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          270 GAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             TCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCcCCHHHHHcCccccCCCH
Confidence            9     589999999998764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-58  Score=460.47  Aligned_cols=281  Identities=32%  Similarity=0.532  Sum_probs=226.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++....   ....+.+|+.+++.+     .|||||++++++..   
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~  127 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-----KHDNIIAIKDILRPTVP  127 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSSC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-----CCCCcceEeeeeecccc
Confidence            4689999999999999999999999999999999975432   234566789888887     68999999998764   


Q ss_pred             ---CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        183 ---KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       183 ---~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                         .+++|||||||+|+|.+++...  +.+++..++.|++||+.||+|||++  |||||||||+|||+  +.++.+||+|
T Consensus       128 ~~~~~~~~ivmE~~~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~--~iiHRDlKP~NIl~--~~~~~~Ki~D  201 (398)
T 4b99_A          128 YGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLV--NENCELKIGD  201 (398)
T ss_dssp             TTTCCCEEEEEECCSEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTCCEEECC
T ss_pred             cccCCEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--cCcCCCcCcccccc--CCCCCEEEee
Confidence               3689999999999999998765  4699999999999999999999964  89999999999999  7788999999


Q ss_pred             CCCceecC-------CccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        260 FGSSCHVG-------QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       260 FG~s~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      ||+|+...       ....+.+||+.|+|||++.+. .|+.++||||+|||+|||++|++||.+.+..+++..|....|.
T Consensus       202 FGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~  281 (398)
T 4b99_A          202 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT  281 (398)
T ss_dssp             CTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             cceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCC
Confidence            99997652       223467999999999999876 5689999999999999999999999999999999999999999


Q ss_pred             CChhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        332 PPGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       332 p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      |+...+......  ..++...+..                ....+..+.              +    .....++|||.+
T Consensus       282 p~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~--------------~----~~s~~~~dLl~~  327 (398)
T 4b99_A          282 PSPAVIQAVGAERVRAYIQSLPPR----------------QPVPWETVY--------------P----GADRQALSLLGR  327 (398)
T ss_dssp             CCGGGTC-----CHHHHHHSSCCC----------------CCCCHHHHS--------------T----TCCHHHHHHHHH
T ss_pred             CChHHhhhhhhhhhhhhhhcCCCc----------------CCCCHHHhC--------------C----CCCHHHHHHHHH
Confidence            987766443221  1111111100                000011110              0    011257899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ||++||.+|||++|||+||||++..
T Consensus       328 mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          328 MLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HCcCChhHCcCHHHHhcCHhhCcCC
Confidence            9999999999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-58  Score=441.41  Aligned_cols=255  Identities=24%  Similarity=0.392  Sum_probs=203.6

Q ss_pred             cCe-eeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        110 DRY-EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       110 ~~y-~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ++| ++.+.||+|+||+||+|.+..++..||+|++....   .....+.+|+.++..+     .|||||+++++|++   
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~   99 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEEEET
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEeeccC
Confidence            355 67888999999999999999999999999996432   2234566788888776     79999999999976   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       ++.+|||||||+| +|.+++....  .+++..++.|+.||+.||+|||+++.+||||||||+||||+ +.++.+||+||
T Consensus       100 ~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~-~~~g~vKl~DF  176 (290)
T 3fpq_A          100 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-GPTGSVKIGDL  176 (290)
T ss_dssp             TEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES-STTSCEEECCT
T ss_pred             CCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE-CCCCCEEEEeC
Confidence             3579999999965 8999998753  58999999999999999999997644599999999999993 24688999999


Q ss_pred             CCceecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        261 GSSCHVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       261 G~s~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      |+|+.... ...+.+||+.|||||++.+ .|+.++|||||||++|||+||++||.+.+....+.+.+.. +.+|..+...
T Consensus       177 Gla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~~~~~~~~~~  254 (290)
T 3fpq_A          177 GLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPASFDKV  254 (290)
T ss_dssp             TGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGGGGC
T ss_pred             cCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-CCCCCCCCcc
Confidence            99976533 3456789999999999876 6999999999999999999999999876554443333221 1111110000


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                 ....+.+||.+||+.||.+||
T Consensus       255 -----------------------------------------------------------~~~~~~~li~~~L~~dP~~R~  275 (290)
T 3fpq_A          255 -----------------------------------------------------------AIPEVKEIIEGCIRQNKDERY  275 (290)
T ss_dssp             -----------------------------------------------------------CCHHHHHHHHHHSCSSGGGSC
T ss_pred             -----------------------------------------------------------CCHHHHHHHHHHccCChhHCc
Confidence                                                                       001578999999999999999


Q ss_pred             CHHHHhcCCCcCcC
Q psy11727        420 SPTNVLRHEFFLKH  433 (437)
Q Consensus       420 t~~e~l~Hp~~~~~  433 (437)
                      |++|+|+||||++.
T Consensus       276 s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          276 SIKDLLNHAFFQEE  289 (290)
T ss_dssp             CHHHHHTSGGGC--
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2e-57  Score=449.10  Aligned_cols=300  Identities=21%  Similarity=0.325  Sum_probs=218.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||+||+|+++   .+++.||||.+... ....+..+|+.++..+.    .|||||+++++|.+.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~----~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAG----GQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTC----SBTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhc----CCCCCceEEEEEEEC
Confidence            34678999999999999999999875   46789999998643 33456778888888764    689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +++|||||||+| +|.+++.     .+++..++.+++||+.||+|||++  |||||||||+|||++. +.+.+||+|||+
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~--gIiHRDiKPeNiLl~~-~~~~~kl~DFGl  164 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF--GIVHRDVKPSNFLYNR-RLKKYALVDFGL  164 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEET-TTTEEEECCCTT
T ss_pred             CEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC--CeEeCcCCHHHeEEeC-CCCeEEECcCCC
Confidence            999999999965 8988873     389999999999999999999964  8999999999999952 347899999999


Q ss_pred             ceecCC-------------------------------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCC
Q psy11727        263 SCHVGQ-------------------------------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGE  310 (437)
Q Consensus       263 s~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~  310 (437)
                      |+....                               ...+.+||+.|+|||++.+. .|+.++||||+|||+|||++|+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            975432                               12345899999999999876 4899999999999999999999


Q ss_pred             CCC-CCCCHHHHHHHHHHHhCCCChhhhccCCccchhhc-ccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCC
Q psy11727        311 PLF-SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFD-RLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGR  388 (437)
Q Consensus       311 ~pf-~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (437)
                      +|| .+.++.+++..|...+|.++............+.. ..+.....               .....+.+.....|...
T Consensus       245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~---------------~~~~~~~~~~~~~p~~~  309 (361)
T 4f9c_A          245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR---------------KLCERLRGMDSSTPKLT  309 (361)
T ss_dssp             SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH---------------HHHHHHC----------
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh---------------HHHHhhccccccccccc
Confidence            988 56778899999999998766544332211110000 00000000               00000000000000000


Q ss_pred             -----CCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        389 -----RRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       389 -----~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                           .......+......++|||++||++||.+|||++|||+||||++.+
T Consensus       310 ~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          310 SDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             ------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             cccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence                 0000011112223679999999999999999999999999999875

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.6e-57  Score=441.56  Aligned_cols=251  Identities=22%  Similarity=0.270  Sum_probs=207.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .+.|++.++||+|+||+||+|+++.+|+.||||+++....    ..+|+.++..+     .|||||+++++|.+++.+||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-----~HpnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-----SSPRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEE
Confidence            4579999999999999999999999999999999975432    23466666554     89999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC-CEEEEeCCCceec
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS-AIKIIDFGSSCHV  266 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~-~ikL~DFG~s~~~  266 (437)
                      |||||+| +|.+++....  .+++..++.|+.||+.||+|||++  |||||||||+||||  +.+| .+||+|||+|+..
T Consensus       128 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~--~IiHRDlKp~NILl--~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR--RILHGDVKADNVLL--SSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             EECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCCGGGEEE--CTTSCCEEECCCTTCEEC
T ss_pred             EEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CceecccCHHHEEE--eCCCCEEEEeeCCCCeEc
Confidence            9999965 8999998764  599999999999999999999964  89999999999999  5565 6999999999876


Q ss_pred             CCc--------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        267 GQT--------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       267 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ...        ....+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+..+.+.+|...  .++..-  
T Consensus       202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~~~--  277 (336)
T 4g3f_A          202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PPPIRE--  277 (336)
T ss_dssp             ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CCGGGG--
T ss_pred             cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CCCchh--
Confidence            322        12357999999999999999999999999999999999999999988777666666542  111000  


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                             +..                                                 .....+.+||.+||+.||.+|
T Consensus       278 -------~~~-------------------------------------------------~~s~~~~~li~~~L~~dP~~R  301 (336)
T 4g3f_A          278 -------IPP-------------------------------------------------SCAPLTAQAIQEGLRKEPVHR  301 (336)
T ss_dssp             -------SCT-------------------------------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred             -------cCc-------------------------------------------------cCCHHHHHHHHHHccCCHhHC
Confidence                   000                                                 001257899999999999999


Q ss_pred             CCHHHH-------------hcCCCcCcCC
Q psy11727        419 ISPTNV-------------LRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~-------------l~Hp~~~~~~  434 (437)
                      ||+.|+             |+|||+++..
T Consensus       302 ~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          302 ASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             CCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             cCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            999997             6899998754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.3e-55  Score=425.24  Aligned_cols=253  Identities=27%  Similarity=0.378  Sum_probs=192.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN--  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~--  184 (437)
                      .++|++.+.||+|+||+||+|+++.+|+.||||+++...  .....+.+|+.++..+     .|||||+++++|.+.+  
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~~   78 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLEKNTT   78 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEEC--
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEecCcc
Confidence            467999999999999999999999999999999996432  2234566777777665     7999999999997654  


Q ss_pred             ----------EEEEEEEeccC-cHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC
Q psy11727        185 ----------HLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       185 ----------~~~lV~E~~~~-~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~  252 (437)
                                ++|||||||.| +|.+++..... ...++..++.++.||+.||+|||++  |||||||||+|||+  +.+
T Consensus        79 ~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~--~IiHRDlKp~NILl--~~~  154 (299)
T 4g31_A           79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK--GLMHRDLKPSNIFF--TMD  154 (299)
T ss_dssp             --------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTT
T ss_pred             ccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC--cCccccCcHHHeEE--CCC
Confidence                      47999999965 89999876532 2345677899999999999999964  89999999999999  678


Q ss_pred             CCEEEEeCCCceecCCc---------------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        253 SAIKIIDFGSSCHVGQT---------------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.+||+|||+|+.....               ..+.+||+.|||||++.+..|+.++|||||||++|||++   ||.+..
T Consensus       155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~  231 (299)
T 4g31_A          155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM  231 (299)
T ss_dssp             CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence            89999999999765321               234589999999999999999999999999999999996   786532


Q ss_pred             HHHHHHHHHHHhC-CCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCC
Q psy11727        318 EVDQMTKIIEVLG-MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS  396 (437)
Q Consensus       318 ~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (437)
                        +....+..... ..|..+.                                                           
T Consensus       232 --~~~~~~~~~~~~~~p~~~~-----------------------------------------------------------  250 (299)
T 4g31_A          232 --ERVRTLTDVRNLKFPPLFT-----------------------------------------------------------  250 (299)
T ss_dssp             --HHHHHHHHHHTTCCCHHHH-----------------------------------------------------------
T ss_pred             --HHHHHHHHHhcCCCCCCCc-----------------------------------------------------------
Confidence              33333322211 1111110                                                           


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       397 ~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                       .....+.+||++||+.||.+|||+.|+|+||||++.+.
T Consensus       251 -~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          251 -QKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             -HHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             -ccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence             00114579999999999999999999999999998653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.6e-55  Score=457.02  Aligned_cols=263  Identities=24%  Similarity=0.448  Sum_probs=224.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +.+.++|++.+.||+|+||+||+|.++.+|+.||+|++..... ....+.+|+.++..+     .|||||+++++|++.+
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~l~~~~~~~~  227 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDN  227 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEECSS
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECC
Confidence            3456899999999999999999999999999999999975432 234567788888877     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|||||||.| +|++++.... ..+++..++.|++||+.||.|||++  ||+||||||+|||++.+..+.+||+|||+|
T Consensus       228 ~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~--~iiHRDlKp~Nill~~~~~~~vKl~DFG~a  304 (573)
T 3uto_A          228 EMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN--NYVHLDLKPENIMFTTKRSNELKLIDFGLT  304 (573)
T ss_dssp             EEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSSSCCCEEECCCSSC
T ss_pred             EEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeeeccCChhhccccCCCCCCEEEeeccce
Confidence            99999999965 8999886543 4699999999999999999999964  899999999999997656689999999999


Q ss_pred             eecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        264 CHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       264 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +....  ...+.+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+..+++..|......++......  
T Consensus       305 ~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~--  382 (573)
T 3uto_A          305 AHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG--  382 (573)
T ss_dssp             EECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTT--
T ss_pred             eEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccC--
Confidence            87643  34567899999999999999999999999999999999999999999999988888865432222111100  


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                              +                                                 ...++|||.+||+.||.+|||+
T Consensus       383 --------~-------------------------------------------------s~~~~dli~~~L~~dp~~R~t~  405 (573)
T 3uto_A          383 --------I-------------------------------------------------SEDGKDFIRKLLLADPNTRMTI  405 (573)
T ss_dssp             --------S-------------------------------------------------CHHHHHHHHTTSCSSGGGSCCH
T ss_pred             --------C-------------------------------------------------CHHHHHHHHHHccCChhHCcCH
Confidence                    0                                                 0157899999999999999999


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      +|||+||||++..+
T Consensus       406 ~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          406 HQALEHPWLTPGNA  419 (573)
T ss_dssp             HHHHHSTTTSCCCC
T ss_pred             HHHhcCcCcCCCCC
Confidence            99999999997654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.5e-53  Score=431.95  Aligned_cols=323  Identities=43%  Similarity=0.757  Sum_probs=264.2

Q ss_pred             CCCCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc-CCCC
Q psy11727         92 GHDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA-DIHS  170 (437)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~-~~~h  170 (437)
                      +.++....+....++.+..+|++.+.||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+. ...|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~  158 (429)
T 3kvw_A           79 GYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT  158 (429)
T ss_dssp             TTBCTTSCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSC
T ss_pred             CCCccCCCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCC
Confidence            345555666667788889999999999999999999999999999999999987666667788899999998764 3478


Q ss_pred             CcEEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       171 ~~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      +||+++++++...+++|+|||+++++|.+++......++++..++.++.||+.||+|||++  |||||||||+|||++.+
T Consensus       159 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlKp~NILl~~~  236 (429)
T 3kvw_A          159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN--RIIHCDLKPENILLKQQ  236 (429)
T ss_dssp             SCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH--TEECSCCSGGGEEESST
T ss_pred             cCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEEccC
Confidence            8999999999999999999999999999999887777799999999999999999999964  89999999999999443


Q ss_pred             CCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q psy11727        251 KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG  330 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  330 (437)
                      ....+||+|||+|+.......+.+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+++..+++.++
T Consensus       237 ~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~  316 (429)
T 3kvw_A          237 GRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLG  316 (429)
T ss_dssp             TSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             CCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence            33349999999999888877888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCccchhhcccCCCcceecccc-c------------cccccCCCCCchhhhhccCCCCCCCCCCCCCCCCh
Q psy11727        331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKST-D------------TRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSL  397 (437)
Q Consensus       331 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (437)
                      .|+..++........|++......+...... +            .+....+....+...+.                 .
T Consensus       317 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------------~  379 (429)
T 3kvw_A          317 MPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK-----------------G  379 (429)
T ss_dssp             CCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTT-----------------T
T ss_pred             CCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhcc-----------------c
Confidence            9999999888877777754332211110000 0            00001111111111110                 0


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       398 ~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      .....|.+||++||++||.+|||++|||+||||++.
T Consensus       380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            112468999999999999999999999999999874

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.2e-54  Score=450.07  Aligned_cols=258  Identities=22%  Similarity=0.359  Sum_probs=210.3

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      -.++|++.++||+|+||+||+|+++.+|+.||||++.+..    ........|..+++.+.  ...|||||+++++|++.
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~--~~~HP~IV~l~~~f~~~  264 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS--TGDCPFIVCMSYAFHTP  264 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHS--SSCCTTBCCEEEEEECS
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHh--hCCCCCEeEEEEEEEEC
Confidence            3678999999999999999999999999999999996432    12233445555555443  34899999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +++|||||||. |+|.+++....  .+++..++.|+.||+.||+|||++  |||||||||+||||  +.+|+|||+|||+
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~--gIiHRDLKPeNILl--d~~G~vKL~DFGl  338 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR--FVVYRDLKPANILL--DEHGHVRISDLGL  338 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEE--CTTSCEEECCCTT
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccccCCchHHeEE--eCCCCEEecccce
Confidence            99999999996 48999998753  599999999999999999999964  89999999999999  7889999999999


Q ss_pred             ceecCC-ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQ-TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV---DQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~p~~~~~  337 (437)
                      |+.... ...+.+||+.|||||++.+ ..|+.++|||||||++|||++|++||.+.+..   .....+....-..|.   
T Consensus       339 A~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~---  415 (689)
T 3v5w_A          339 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD---  415 (689)
T ss_dssp             CEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCT---
T ss_pred             eeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCc---
Confidence            987643 4457899999999999974 57999999999999999999999999864332   223333221000000   


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                                                  .....+++||.+||+.||.+
T Consensus       416 ------------------------------------------------------------~~S~~a~dLI~~lL~~dP~~  435 (689)
T 3v5w_A          416 ------------------------------------------------------------SFSPELRSLLEGLLQRDVNR  435 (689)
T ss_dssp             ------------------------------------------------------------TSCHHHHHHHHHHTCSCGGG
T ss_pred             ------------------------------------------------------------cCCHHHHHHHHHHccCCHhH
Confidence                                                                        00115799999999999999


Q ss_pred             CCC-----HHHHhcCCCcCcCCCC
Q psy11727        418 RIS-----PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       418 R~t-----~~e~l~Hp~~~~~~~~  436 (437)
                      |++     ++|+++||||++.+++
T Consensus       436 Rl~~~~~ga~ei~~HpfF~~idW~  459 (689)
T 3v5w_A          436 RLGCLGRGAQEVKESPFFRSLDWQ  459 (689)
T ss_dssp             CTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred             CCCCCCCCHHHHhcCccccCCCHH
Confidence            998     7999999999988764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=5.3e-53  Score=417.60  Aligned_cols=317  Identities=33%  Similarity=0.592  Sum_probs=256.0

Q ss_pred             CCCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCc
Q psy11727         93 HDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRY  172 (437)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~  172 (437)
                      .+++...+.+..+..+.++|.+.+.||+|+||+||+|.+..+++.||||+++...........|..+++.+.+..+.|+|
T Consensus        18 ~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           18 GDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             --CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             cCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            45667778889999999999999999999999999999999999999999986555566778899999999888888999


Q ss_pred             EEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec---
Q psy11727        173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS---  249 (437)
Q Consensus       173 iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~---  249 (437)
                      |+++++++...+++|+|||+++++|.+++......++++..++.++.||+.||+|||++  ||+||||||+|||++.   
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM--SLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCTTC
T ss_pred             eecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCcccEEEccccc
Confidence            99999999999999999999988999999887766799999999999999999999964  8999999999999943   


Q ss_pred             --------------------CCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC
Q psy11727        250 --------------------PKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG  309 (437)
Q Consensus       250 --------------------~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg  309 (437)
                                          ...+.+||+|||+|...........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  255 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG  255 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence                                137789999999999887777778899999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc--hhhcccCCCcceeccccccccccCCCCC-chhhhhccCCCCCC
Q psy11727        310 EPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSK-RLDTILGVDNGGPG  386 (437)
Q Consensus       310 ~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  386 (437)
                      ++||.+.+..+.+..+....+.+|..++.......  .++..   ...         ...+|... ....+......   
T Consensus       256 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~---------~~~~p~~~~~~~~~~~~~~~---  320 (360)
T 3llt_A          256 SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNK---DEL---------KLAWPENASSINSIKHVKKC---  320 (360)
T ss_dssp             SCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEET---TTT---------EECTTTTCSCHHHHHHHHTC---
T ss_pred             CCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCc---ccc---------eecCcccccchhhhhhhhhc---
Confidence            99999999999999999999988887765443321  11111   000         01111110 00000000000   


Q ss_pred             CCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcC
Q psy11727        387 GRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~  431 (437)
                           .+.........+.+||.+||++||.+|||+.|+|+||||+
T Consensus       321 -----~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          321 -----LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             -----CCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             -----ccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                 0000011123678999999999999999999999999996

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.3e-54  Score=414.16  Aligned_cols=251  Identities=24%  Similarity=0.324  Sum_probs=204.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|.+.+.||+|+||+||+|+..     .++..||||+++.... ...++.+|+.++..+     +|||||+++++|.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~~~   86 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVCVE   86 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-----CCCCCccEEEEEee
Confidence            357999999999999999999865     4688999999975432 234567788887765     79999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTN-----------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~-----------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      .+.+|||||||+ |+|.+++....           ...+++..+..|+.||+.||+|||++  +||||||||+||||  +
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDlKp~NILl--~  162 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ--HFVHRDLATRNCLV--G  162 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--C
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCccCHhhEEE--C
Confidence            999999999995 58999997532           34699999999999999999999965  79999999999999  6


Q ss_pred             CCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q psy11727        251 KRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTK  324 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~  324 (437)
                      +++.+||+|||+|+......     ....||+.|||||++.+..|+.++|||||||++|||+| |++||.+.+..+.+..
T Consensus       163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~  242 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC  242 (299)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            78899999999997654322     23468999999999999999999999999999999999 9999999998888877


Q ss_pred             HHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      +......+.+.                                                              .-...+.
T Consensus       243 i~~~~~~~~p~--------------------------------------------------------------~~~~~~~  260 (299)
T 4asz_A          243 ITQGRVLQRPR--------------------------------------------------------------TCPQEVY  260 (299)
T ss_dssp             HHHTCCCCCCT--------------------------------------------------------------TCCHHHH
T ss_pred             HHcCCCCCCCc--------------------------------------------------------------cchHHHH
Confidence            76532211100                                                              0001578


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      +||.+||+.||.+|||++|+  |+||++
T Consensus       261 ~li~~cl~~dP~~RPs~~~i--~~~L~~  286 (299)
T 4asz_A          261 ELMLGCWQREPHMRKNIKGI--HTLLQN  286 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence            99999999999999999998  456543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-52  Score=409.60  Aligned_cols=248  Identities=24%  Similarity=0.308  Sum_probs=198.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|.+.+.||+|+||+||+|+..     .+++.||||+++.... ....+.+|+.++..+     +|||||+++++|.+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~~~  114 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-----QHQHIVRFFGVCTE  114 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEE
Confidence            357889999999999999999865     4688999999975432 234567788887765     79999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTN-------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~-------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      .+.+|||||||+ |+|.+++....             ...+++..+..|+.||+.||+|||++  +||||||||+|||| 
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDLKp~NILl-  191 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL--HFVHRDLATRNCLV-  191 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE-
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC--CeecccccHhhEEE-
Confidence            999999999996 48999987643             23589999999999999999999964  79999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                       ++++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||++|||+| |++||.+.+..+.+
T Consensus       192 -~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  270 (329)
T 4aoj_A          192 -GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI  270 (329)
T ss_dssp             -ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred             -CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence             67889999999999765322     234678999999999999999999999999999999999 89999999988887


Q ss_pred             HHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhH
Q psy11727        323 TKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMK  402 (437)
Q Consensus       323 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (437)
                      ..+......+.+.                                                              .-...
T Consensus       271 ~~i~~g~~~~~p~--------------------------------------------------------------~~~~~  288 (329)
T 4aoj_A          271 DCITQGRELERPR--------------------------------------------------------------ACPPE  288 (329)
T ss_dssp             HHHHHTCCCCCCT--------------------------------------------------------------TCCHH
T ss_pred             HHHHcCCCCCCcc--------------------------------------------------------------cccHH
Confidence            7776532211100                                                              00025


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        403 FKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       403 ~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      +.+||.+||+.||++|||++|++++
T Consensus       289 ~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          289 VYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHcCcChhHCcCHHHHHHH
Confidence            7899999999999999999999764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.6e-53  Score=407.57  Aligned_cols=248  Identities=23%  Similarity=0.302  Sum_probs=204.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .+.+++.+.||+|+||+||+|...     .+++.||||+++...  .....+.+|+.++..+     .|||||+++++|.
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g~~~   99 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-----QHPNVVCLLGVVT   99 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-----CCCCCCCcceEEE
Confidence            456888999999999999999853     467899999997432  2345688899999887     7999999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      +++.++||||||+ |+|.++|....              ...+++..+..|+.||+.||+|||++  +||||||||+|||
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--~iiHRDLK~~NIL  177 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH--HVVHKDLATRNVL  177 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEE
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--CCCCCCccccceE
Confidence            9999999999995 58999986532              13589999999999999999999965  7999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVD  320 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~  320 (437)
                      |  ++++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||++|||+| |.+||.+.+..+
T Consensus       178 l--~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~  255 (308)
T 4gt4_A          178 V--YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD  255 (308)
T ss_dssp             E--CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred             E--CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9  77889999999999765322     234678999999999999999999999999999999999 899999999888


Q ss_pred             HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       321 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      .+..+......|.+.                                                              .-.
T Consensus       256 ~~~~i~~~~~~~~p~--------------------------------------------------------------~~~  273 (308)
T 4gt4_A          256 VVEMIRNRQVLPCPD--------------------------------------------------------------DCP  273 (308)
T ss_dssp             HHHHHHTTCCCCCCT--------------------------------------------------------------TCC
T ss_pred             HHHHHHcCCCCCCcc--------------------------------------------------------------cch
Confidence            777765432211100                                                              000


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ..+.+|+.+||+.||.+|||+.|++++
T Consensus       274 ~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          274 AWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            157899999999999999999999875

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1e-52  Score=405.06  Aligned_cols=252  Identities=27%  Similarity=0.324  Sum_probs=195.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+++.+.+.||+|+||+||+|+...   .||||+++...   .....+.+|+.++..+     +|||||++++++. .+.
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g~~~-~~~  105 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-----RHVNILLFMGYMT-KDN  105 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SSS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEE-CCe
Confidence            4678899999999999999997532   59999987432   2234566777777665     7999999999876 456


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|||||||+ |+|.+++.... ..+++..+..|+.||+.||+|||++  +||||||||+||||  ++++.+||+|||+|+
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~--~IiHRDlKp~NILl--~~~~~~Ki~DFGla~  180 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK--NIIHRDMKSNNIFL--HEGLTVKIGDFGLAT  180 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCCSSSEEE--ETTEEEEECCCSSCB
T ss_pred             EEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CccCCccCHHHEEE--CCCCcEEEeeccCce
Confidence            899999996 58999987654 4699999999999999999999964  79999999999999  678899999999997


Q ss_pred             ecCC-----ccccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        265 HVGQ-----TLYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       265 ~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ....     ...+.+||+.|||||++.+   ..|+.++|||||||++|||+||++||.+.+....+..++.....+|...
T Consensus       181 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~  260 (307)
T 3omv_A          181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS  260 (307)
T ss_dssp             C------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCST
T ss_pred             ecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcc
Confidence            6532     2345689999999999974   3589999999999999999999999998776666555544211111000


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                               .........+.+||.+||+.||.
T Consensus       261 ---------------------------------------------------------~~~~~~~~~l~~li~~cl~~dP~  283 (307)
T 3omv_A          261 ---------------------------------------------------------KLYKNCPKAMKRLVADCVKKVKE  283 (307)
T ss_dssp             ---------------------------------------------------------TSCTTSCHHHHHHHHHHTCSSST
T ss_pred             ---------------------------------------------------------cccccchHHHHHHHHHHcCCCHh
Confidence                                                                     00000012578999999999999


Q ss_pred             CCCCHHHH------hcCCCcC
Q psy11727        417 KRISPTNV------LRHEFFL  431 (437)
Q Consensus       417 ~R~t~~e~------l~Hp~~~  431 (437)
                      +|||+.|+      |+|||-+
T Consensus       284 ~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          284 ERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             TSCCHHHHHHHHHHHHTTCCC
T ss_pred             HCcCHHHHHHHHHHHhccCCC
Confidence            99999976      5777643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.1e-51  Score=410.42  Aligned_cols=312  Identities=33%  Similarity=0.555  Sum_probs=252.4

Q ss_pred             cceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCC---CCcEEE
Q psy11727         99 DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH---SRYIVK  175 (437)
Q Consensus        99 ~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~---h~~iv~  175 (437)
                      .+.+..++.+.++|++.+.||+|+||+||+|++..+++.||||++.........+.+|+.+++.+.+.+..   |+||++
T Consensus        26 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           26 YHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             ceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            34567788889999999999999999999999999999999999986655567788899999999875433   678999


Q ss_pred             ecceee----ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        176 LKGHFT----WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       176 l~~~~~----~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      ++++|.    ...++|+|||+++++|.+.+.......+++..++.++.||+.||+|||++ .||+||||||+|||++.+.
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK-CRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT-TCEECCCCSGGGEEECCCH
T ss_pred             eecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHeeEeccc
Confidence            999998    45689999999999999988877666799999999999999999999963 2799999999999994321


Q ss_pred             -----------------------------------------------CCCEEEEeCCCceecCCccccccccccccChhh
Q psy11727        252 -----------------------------------------------RSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEV  284 (437)
Q Consensus       252 -----------------------------------------------~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~  284 (437)
                                                                     ...+||+|||++..........+||+.|+|||+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHH
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChh
Confidence                                                           137999999999988777777889999999999


Q ss_pred             hcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceec
Q psy11727        285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN------EVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLK  358 (437)
Q Consensus       285 ~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (437)
                      +.+..++.++|||||||++|+|++|++||.+.+      ..+.+..+.+.++.+|..++........+|.........  
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--  342 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI--  342 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC--
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc--
Confidence            999999999999999999999999999998765      567788899999999998887776666666543221100  


Q ss_pred             cccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        359 KSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                             .....+. +.+++.           .....+......+.+||.+||++||.+|||+.|+|+||||++
T Consensus       343 -------~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          343 -------TKLKPWG-LFEVLV-----------EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             -------CCCCCCC-HHHHHH-----------HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             -------cccCCcc-hhHhhh-----------hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                   0000000 001110           001223445567899999999999999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=8.4e-51  Score=393.27  Aligned_cols=289  Identities=30%  Similarity=0.503  Sum_probs=227.8

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      +..+.++|++.+.||+|+||+||+|++..+++.||||++....      .......+|+.+++.+...  .||||+++++
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~niv~~~~   81 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF--EHPNVVRLMD   81 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH--CCTTBCCEEE
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc--CCCCeEEeee
Confidence            4556789999999999999999999999999999999986322      2234677888888887542  6899999999


Q ss_pred             eeeECC-----EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        179 HFTWKN-----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       179 ~~~~~~-----~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                      ++....     .+++|||+++++|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~Nil~--~~~~  157 (308)
T 3g33_A           82 VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN--CIVHRDLKPENILV--TSGG  157 (308)
T ss_dssp             EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCTTTEEE--CTTS
T ss_pred             eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--cCCC
Confidence            998765     68999999999999999887666699999999999999999999964  89999999999999  6788


Q ss_pred             CEEEEeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||++.....  ......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+.++.+..+.
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  237 (308)
T 3g33_A          158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL  237 (308)
T ss_dssp             CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999999999976543  234568899999999999999999999999999999999999999999999999999999998


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++...++......       .+.+.           ....+.+..+.                  ......+.+||.+||
T Consensus       238 ~~~~~~~~~~~~~-------~~~~~-----------~~~~~~~~~~~------------------~~~~~~~~~li~~~L  281 (308)
T 3g33_A          238 PPEDDWPRDVSLP-------RGAFP-----------PRGPRPVQSVV------------------PEMEESGAQLLLEML  281 (308)
T ss_dssp             CCTTTSCSSCSSC-------GGGSC-----------CCCCCCHHHHS------------------CSCCHHHHHHHHHHT
T ss_pred             CChhhccchhhcc-------ccccC-----------CCCCCcHHHhC------------------ccccHHHHHHHHHHh
Confidence            8876554322110       00000           00001111110                  011236789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ++||.+|||+.|+|+||||++...
T Consensus       282 ~~dP~~R~t~~e~l~h~~~~~~~~  305 (308)
T 3g33_A          282 TFNPHKRISAFRALQHSYLHKDEG  305 (308)
T ss_dssp             CSSTTTSCCHHHHHTSTTC-----
T ss_pred             cCCCccCCCHHHHhcCccccCCCC
Confidence            999999999999999999997543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=6.8e-51  Score=395.08  Aligned_cols=288  Identities=30%  Similarity=0.501  Sum_probs=228.8

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .++.+.++|++.+.||+|+||+||+|.+. +++.||+|++.....   ....+.+|+.+++.+     .||||+++++++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~   88 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNIVSLIDVI   88 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-----CCCCEeeeeeEE
Confidence            34567889999999999999999999985 588999999974322   224566788888877     689999999999


Q ss_pred             eECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        181 TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      .+.+++++||||++++|.+.+.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        89 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~Dikp~NIl~--~~~~~~kl~Df  163 (311)
T 3niz_A           89 HSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH--RILHRDLKPQNLLI--NSDGALKLADF  163 (311)
T ss_dssp             CCSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCC
T ss_pred             ccCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCchHhEEE--CCCCCEEEccC
Confidence            9999999999999999999887754 4699999999999999999999964  89999999999999  67888999999


Q ss_pred             CCceecCCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        261 GSSCHVGQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       261 G~s~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|+...
T Consensus       164 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  243 (311)
T 3niz_A          164 GLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE  243 (311)
T ss_dssp             TTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTT
T ss_pred             cCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHH
Confidence            999876532   334578999999999986 5689999999999999999999999999999999999999998887665


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      ++.......+......               ......+..+..                  .....+.+||.+||++||.
T Consensus       244 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~------------------~~~~~~~~li~~~L~~dP~  290 (311)
T 3niz_A          244 WPQVQELPLWKQRTFQ---------------VFEKKPWSSIIP------------------GFCQEGIDLLSNMLCFDPN  290 (311)
T ss_dssp             SGGGTTSHHHHSCCCC---------------CCCCCCHHHHST------------------TCCHHHHHHHHHHSCSCTT
T ss_pred             hhhhhccchhhhcccc---------------cccCCcHHHhCc------------------ccCHHHHHHHHHHcCCChh
Confidence            5443332222111000               000000111100                  0112578999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCCC
Q psy11727        417 KRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +|||++|+|+||||++...
T Consensus       291 ~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          291 KRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             TSCCHHHHHTSGGGTTSCT
T ss_pred             HCCCHHHHhcCcccccCCc
Confidence            9999999999999998764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.2e-50  Score=414.59  Aligned_cols=292  Identities=31%  Similarity=0.538  Sum_probs=225.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++...   .....++.+|+.+++.+     .|||||+++++|...
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQ  133 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEccC
Confidence            4578999999999999999999999999999999999743   22234566788887776     789999999999654


Q ss_pred             ------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 ------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                            .++|+||||++++|.+.+..    .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus       134 ~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~--~iiHrDlkp~NIll--~~~~~~kl  205 (464)
T 3ttj_A          134 KTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKI  205 (464)
T ss_dssp             CSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEE
T ss_pred             CccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChHhEEE--eCCCCEEE
Confidence                  47899999999998888754    389999999999999999999964  89999999999999  77889999


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||+|......  ....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++.+|++.+|.|+..
T Consensus       206 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          206 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE  285 (464)
T ss_dssp             CCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             EEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            999999876543  345789999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhccCCccc-hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        336 LLHGASKTS-KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       336 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ++....... .++...+...                ...+....      |.................++|||.+||++|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d  343 (464)
T 3ttj_A          286 FMKKLQPTVRNYVENRPKYA----------------GLTFPKLF------PDSLFPADSEHNKLKASQARDLLSKMLVID  343 (464)
T ss_dssp             HHTTSCHHHHHHHTTSCCCC----------------CCCHHHHS------CGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHcchhhhhHhhcccccC----------------CCChHHhC------cccccccccccccccCHHHHHHHHHHcCCC
Confidence            876554321 2222111000                00000000      000000000111112346899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||++|||+||||+..
T Consensus       344 P~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          344 PAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             TTTSCCHHHHHTSTTTGGG
T ss_pred             hhhCCCHHHHhcChhhhhc
Confidence            9999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.6e-50  Score=392.50  Aligned_cols=314  Identities=32%  Similarity=0.555  Sum_probs=250.9

Q ss_pred             ceeecCceeccCeeeeceecccCceEEEEEEE-cCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcC-CCCCcEEEec
Q psy11727        100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFD-HEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD-IHSRYIVKLK  177 (437)
Q Consensus       100 ~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~-~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~-~~h~~iv~l~  177 (437)
                      .....++.+.++|++.+.||+|+||+||+|.+ ..+++.||||+++...........|+.+++.+.+.+ ..|+++++++
T Consensus         4 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A            4 LICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             GTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             eeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            44567888899999999999999999999998 568899999999866555677888999999998754 4566899999


Q ss_pred             ceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC------
Q psy11727        178 GHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK------  251 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~------  251 (437)
                      +++...+++++||||++++|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|||++.+.      
T Consensus        84 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           84 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN--KLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESCCCEEEEEC
T ss_pred             cccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC--CCcCCCCCHHHEEEeccccccccC
Confidence            999999999999999988999999887666799999999999999999999964  899999999999995332      


Q ss_pred             -----------CCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH
Q psy11727        252 -----------RSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD  320 (437)
Q Consensus       252 -----------~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~  320 (437)
                                 ++.+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+
T Consensus       162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          162 PKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             ----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             CccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                       667999999999888777677889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       321 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      ....+....+.+|..++........+.....  .|.             ............. .+.   ...........
T Consensus       242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~-~~~---~~~~~~~~~~~  302 (339)
T 1z57_A          242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRL--DWD-------------EHSSAGRYVSRAC-KPL---KEFMLSQDVEH  302 (339)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCSCGGGEETTEE--CCC-------------TTSHHHHHHHHHC-CCG---GGGCSCCSHHH
T ss_pred             HHHHHHHHhCCCCHHHHhhccchhHHhhccc--ccc-------------ccccccchhhhcC-cch---hhhcccchhhH
Confidence            9999999999999888776554322221100  000             0000000000000 000   00001112334


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ..+.+||.+||+.||.+|||+.|+++||||+...
T Consensus       303 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          303 ERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence            4789999999999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=4.8e-50  Score=394.35  Aligned_cols=321  Identities=31%  Similarity=0.562  Sum_probs=256.1

Q ss_pred             CCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCC-eEEEEEEecCCcccchHHHHHHHHHHHhhhcC-CCCC
Q psy11727         94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEK-CQVAIKIIKNKKPFLNQAQIEVQLLEKINKAD-IHSR  171 (437)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~-~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~-~~h~  171 (437)
                      ++....+....++.+.++|++.+.||+|+||+||+|.+..++ ..||+|+++...........|+.+++.+.+.+ ..+.
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            345556778889999999999999999999999999998776 79999999865555667788999999998754 3455


Q ss_pred             cEEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--  249 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--  249 (437)
                      +++.+.+++...+++|+|||+++++|.+.+.......+++..++.++.||+.||+|||++  ||+||||||+|||+..  
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~--~ivH~Dlkp~NIll~~~~  160 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN--QLTHTDLKPENILFVNSE  160 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEESCCC
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEeccc
Confidence            799999999999999999999999999988877666799999999999999999999964  8999999999999943  


Q ss_pred             ---------------CCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        250 ---------------PKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       250 ---------------~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                                     +.++.+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|.+||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  240 (355)
T 2eu9_A          161 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ  240 (355)
T ss_dssp             EEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence                           24678999999999887777777889999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      +.+..+.+..+....+.+|..++........++..-..               ++........+.... .+.   .....
T Consensus       241 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~~~---~~~~~  301 (355)
T 2eu9_A          241 THENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLV---------------WDENSSDGRYVKENC-KPL---KSYML  301 (355)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEEC---------------CCTTSHHHHHHHHHC-CCG---GGGCS
T ss_pred             CCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccc---------------cccccchhccccccC-Ccc---ccccc
Confidence            99999999999999999999888766544333321100               000000000000000 000   00001


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ........+.+||.+||+.||.+|||+.|+|+||||++...
T Consensus       302 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          302 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             CCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             ccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence            11233447899999999999999999999999999998653

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.2e-51  Score=406.46  Aligned_cols=297  Identities=30%  Similarity=0.498  Sum_probs=219.3

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||||++....   .......+|+.++..+.    .|+||+++++++..
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~l~~~~~~   80 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS----GHENIVNLLNVLRA   80 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEEC
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc----CCCCCCeeeeEEec
Confidence            445789999999999999999999999999999999986432   22344556777777763    58999999999986


Q ss_pred             CC--EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 KN--HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 ~~--~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      .+  .+|+||||++++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        81 ~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll--~~~~~~kl~DF  153 (388)
T 3oz6_A           81 DNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG--GLLHRDMKPSNILL--NAECHVKVADF  153 (388)
T ss_dssp             TTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCC
T ss_pred             CCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC--CEEeCCCCHHHeEE--cCCCCEEecCC
Confidence            54  79999999999999988764   489999999999999999999964  89999999999999  77889999999


Q ss_pred             CCceecCC------------------------ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        261 GSSCHVGQ------------------------TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       261 G~s~~~~~------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      |+|+....                        .....+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+
T Consensus       154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            99976422                        1234689999999999987 6799999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhCCCChhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchh---hhhccCCCCCCCCCC
Q psy11727        316 KNEVDQMTKIIEVLGMPPGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLD---TILGVDNGGPGGRRR  390 (437)
Q Consensus       316 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  390 (437)
                      .+..+++..|...++.|+...+......  ..++..+....       ..  ...+......   ..+....        
T Consensus       234 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~--------  296 (388)
T 3oz6_A          234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV-------EI--RQSNKRDIFTKWKNLLLKIN--------  296 (388)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHC-------C-------CCCCHHHHHHHHHHHC--------
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccc-------cc--cCCCHHHhCcchhhhccccc--------
Confidence            9999999999999999998877543321  12221111000       00  0000000000   0000000        


Q ss_pred             CCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        391 NEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       391 ~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                          ........+.+||.+||++||.+|||++|||+||||+...
T Consensus       297 ----~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          297 ----PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             ----TTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             ----ccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                0001112579999999999999999999999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.2e-51  Score=405.63  Aligned_cols=255  Identities=24%  Similarity=0.368  Sum_probs=204.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-----CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-----KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||++.....  ....+..|+.++..+.    +|||||+++++|.
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~----hhpnIV~l~g~~~  138 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT  138 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC----CCCcEEEEEEEEE
Confidence            57899999999999999999987654     46899999975432  2345778999998885    5689999999987


Q ss_pred             EC-CEEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        182 WK-NHLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       182 ~~-~~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      .. +.+|||||||++ +|.++|....              ...+++..+..|+.||+.||+|||++  +||||||||+||
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--~iiHRDLK~~NI  216 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNI  216 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGE
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--CeecCccCccce
Confidence            64 579999999965 8999997532              23489999999999999999999965  799999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV  319 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~  319 (437)
                      |+  ++++.+||+|||+|+.....     ..+.+||+.|||||++.+..|+.++|||||||++|||+| |++||.+.+..
T Consensus       217 Ll--~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~  294 (353)
T 4ase_A          217 LL--SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  294 (353)
T ss_dssp             EE--CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ee--CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence            99  67889999999999865332     234578999999999999999999999999999999998 99999987654


Q ss_pred             HHHHHHHHH-hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        320 DQMTKIIEV-LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       320 ~~~~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      +.+.+++.. ..++.+.                                                          .    
T Consensus       295 ~~~~~~i~~g~~~~~p~----------------------------------------------------------~----  312 (353)
T 4ase_A          295 EEFCRRLKEGTRMRAPD----------------------------------------------------------Y----  312 (353)
T ss_dssp             HHHHHHHHHTCCCCCCT----------------------------------------------------------T----
T ss_pred             HHHHHHHHcCCCCCCCc----------------------------------------------------------c----
Confidence            444433332 1111100                                                          0    


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC--CCcCcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH--EFFLKH  433 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H--p~~~~~  433 (437)
                      ....+.+||.+||+.||.+|||+.|+++|  .+++..
T Consensus       313 ~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          313 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence            01157899999999999999999999998  455433

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.8e-50  Score=385.00  Aligned_cols=280  Identities=30%  Similarity=0.505  Sum_probs=223.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||+||+|.+..+++.||+|++......   .....+|+.+++.+     .||||+++++++.+.+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-----CCCCEeeEEeEEEeCCEE
Confidence            6899999999999999999999999999999999744322   24455677666655     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+++++.+.+.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~--~ivH~dikp~Nil~--~~~~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR--NVLHRDLKPQNLLI--NRNGELKLANFGLARAF  151 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCCTTCEEC
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--cCCCCEEEeecccceec
Confidence            9999999999988877644 4699999999999999999999964  89999999999999  67889999999999876


Q ss_pred             CCc---cccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   .....||+.|+|||++.+.. ++.++|||||||++|+|++|. |+|.+.+..+.+..+....+.|+...++...
T Consensus       152 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             CCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence            432   23457899999999998766 899999999999999999876 5578888889999999999988776554332


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+...                ...+....                  ...........+.+||.+||++||.+|||+
T Consensus       232 ~~~~~~~~----------------~~~~~~~~------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  277 (292)
T 3o0g_A          232 KLPDYKPY----------------PMYPATTS------------------LVNVVPKLNATGRDLLQNLLKCNPVQRISA  277 (292)
T ss_dssp             GSTTCCCC----------------CCCCTTCC------------------CTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             cccccccc----------------ccccCCcc------------------hhhcccccChHHHHHHHHHhccChhhCCCH
Confidence            21111000                00000000                  000111122367899999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      +|+|+||||++.
T Consensus       278 ~e~l~hp~f~~~  289 (292)
T 3o0g_A          278 EEALQHPYFSDF  289 (292)
T ss_dssp             HHHHTSGGGTTC
T ss_pred             HHHhcCcccccC
Confidence            999999999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-50  Score=394.51  Aligned_cols=260  Identities=25%  Similarity=0.412  Sum_probs=222.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|.+.+.||+|+||+||+|.+..+++.||+|++.........+.+|+.++..+     .||||+++++++.+.+.+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~   76 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-----CCCCCCeEeEEEecCCEE
Confidence            356899999999999999999999999999999999976554455677888888876     689999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||++| +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||++.+.++.+||+|||++..
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH--NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            999999965 8999886643 4589999999999999999999964  89999999999999654478999999999987


Q ss_pred             cCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...  ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+......++...+...   
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---  230 (321)
T 1tki_A          154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI---  230 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTS---
T ss_pred             CCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccC---
Confidence            643  334567899999999999988999999999999999999999999999988888887765433332221110   


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                              ...+.+||.+||..||.+|||+.|
T Consensus       231 --------------------------------------------------------s~~~~~li~~~L~~dp~~Rpt~~e  254 (321)
T 1tki_A          231 --------------------------------------------------------SIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             --------------------------------------------------------CHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             --------------------------------------------------------CHHHHHHHHHHcCCChhHCcCHHH
Confidence                                                                    015789999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +|+||||++.
T Consensus       255 ~l~hp~~~~~  264 (321)
T 1tki_A          255 ALQHPWLKQK  264 (321)
T ss_dssp             HHHSHHHHSC
T ss_pred             HhcChhhccC
Confidence            9999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.7e-50  Score=392.22  Aligned_cols=256  Identities=27%  Similarity=0.399  Sum_probs=216.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++....   .....+.+|+.+++.+     .||||+++++++..
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~   85 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-----NHPNIVKLFEVIET   85 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEE
Confidence            345689999999999999999999999999999999996432   2234566788888776     68999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+|+||||++ ++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~--~ivHrDlkp~NIll--~~~~~~kl~DFG  159 (328)
T 3fe3_A           86 EKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK--RIVHRDLKAENLLL--DADMNIKIADFG  159 (328)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTSCEEECSTT
T ss_pred             CCEEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CEeccCCCHHHEEE--cCCCCEEEeecc
Confidence            999999999995 48999887653  589999999999999999999964  89999999999999  778899999999


Q ss_pred             CceecC--CccccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVG--QTLYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ++....  ......+||+.|+|||++.+..++ .++|||||||++|+|++|++||.+.+..+....+.......|..   
T Consensus       160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~---  236 (328)
T 3fe3_A          160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY---  236 (328)
T ss_dssp             CCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT---
T ss_pred             CceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC---
Confidence            997653  334567899999999999988875 78999999999999999999999998887777765421111100   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                  ....+.+||.+||+.||.+|
T Consensus       237 ------------------------------------------------------------~s~~~~~li~~~L~~dP~~R  256 (328)
T 3fe3_A          237 ------------------------------------------------------------MSTDCENLLKRFLVLNPIKR  256 (328)
T ss_dssp             ------------------------------------------------------------SCHHHHHHHHHHCCSSTTTS
T ss_pred             ------------------------------------------------------------CCHHHHHHHHHHCCCChhHC
Confidence                                                                        00157899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCC
Q psy11727        419 ISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~  435 (437)
                      ||++|+++||||+....
T Consensus       257 ~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          257 GTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             CCHHHHTTCTTTTTTCT
T ss_pred             cCHHHHhcCHhhcCCCc
Confidence            99999999999987543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=8.8e-50  Score=395.23  Aligned_cols=259  Identities=27%  Similarity=0.441  Sum_probs=217.8

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+|+.||+|++.....       ....+..|+.++..+     .||||+++++
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~   82 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-----LHPNIITLHD   82 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-----CCTTBCCEEE
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-----CCcCCCcEEE
Confidence            4557889999999999999999999999999999999975432       124567788887765     6899999999


Q ss_pred             eeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC----
Q psy11727        179 HFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS----  253 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~----  253 (437)
                      +|.+.+.+++||||++ ++|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||+.  .++    
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~--~~~~~~~  156 (361)
T 2yab_A           83 VYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK--KIAHFDLKPENIMLL--DKNIPIP  156 (361)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEES--CTTSSSC
T ss_pred             EEEeCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEEe--CCCCCcc
Confidence            9999999999999995 5899988764  3599999999999999999999964  899999999999994  343    


Q ss_pred             CEEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus       157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  236 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD  236 (361)
T ss_dssp             CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            7999999999876432  34578999999999999999999999999999999999999999999988888877654322


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      .+...+.          .+                                                 ...+.+||.+||
T Consensus       237 ~~~~~~~----------~~-------------------------------------------------s~~~~~li~~~L  257 (361)
T 2yab_A          237 FDEEFFS----------QT-------------------------------------------------SELAKDFIRKLL  257 (361)
T ss_dssp             CCHHHHT----------TS-------------------------------------------------CHHHHHHHHHHS
T ss_pred             CCchhcc----------CC-------------------------------------------------CHHHHHHHHHHC
Confidence            2222111          00                                                 015789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ..||.+|||+.|+|+||||+...
T Consensus       258 ~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          258 VKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             CSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CCChhHCcCHHHHhcCcCcCCCc
Confidence            99999999999999999998654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=5.9e-50  Score=389.42  Aligned_cols=289  Identities=31%  Similarity=0.526  Sum_probs=215.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||+|+++...  .....+.+|+.++..+     .||||+++++++.+.+.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-----KHENIVRLYDVIHTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-----CBTTBCCEEEEECCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-----CCCCcceEEEEEEECCeE
Confidence            468999999999999999999999999999999997432  2335667788877766     689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        187 CLVFELLSYNLYNLIRNTN----FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~----~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      ++||||++++|.+++....    ...+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        79 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~--~ivH~Dlkp~NIl~--~~~~~~kl~Dfg~  154 (317)
T 2pmi_A           79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN--KILHRDLKPQNLLI--NKRGQLKLGDFGL  154 (317)
T ss_dssp             EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCCSS
T ss_pred             EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCChHHeEE--cCCCCEEECcCcc
Confidence            9999999999999886542    23589999999999999999999964  89999999999999  6788999999999


Q ss_pred             ceecCCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        263 SCHVGQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       263 s~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +......   .....||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.|+...++
T Consensus       155 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          155 ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             CEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred             ceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence            9876432   3346789999999999864 68999999999999999999999999999999999999999988876665


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                      .......+...+...                ....+...+...             ........+.+||.+||+.||.+|
T Consensus       235 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-------------~~~~~~~~l~~li~~~L~~dP~~R  285 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQR----------------PPRDLRQVLQPH-------------TKEPLDGNLMDFLHGLLQLNPDMR  285 (317)
T ss_dssp             GGGGCTTCCTTCCCC----------------CCCCSHHHHGGG-------------CSSCCCHHHHHHHHHHSCSSGGGS
T ss_pred             hhhhhhhcccccccc----------------cchhHHHhhccc-------------ccccCCHHHHHHHHHHCCCCcccC
Confidence            433322221110000                000111111000             000011268999999999999999


Q ss_pred             CCHHHHhcCCCcCcCCC
Q psy11727        419 ISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~  435 (437)
                      ||++|+|+||||++...
T Consensus       286 pt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          286 LSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             CCHHHHTTSGGGGGGCC
T ss_pred             CCHHHHhCChhhhcccc
Confidence            99999999999998654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.5e-50  Score=399.71  Aligned_cols=254  Identities=27%  Similarity=0.422  Sum_probs=211.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+++.||||+++...    ........|..++..+.    .||||++++++|.+.+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~----~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR----NHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc----CCCceeeEEEEEEeCC
Confidence            578999999999999999999999999999999997431    22344556777776653    6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||+.| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+|
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NILl--~~~g~ikL~DFG~a  171 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK--GIIYRDLKLDNVLL--DHEGHCKLADFGMC  171 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCHHHEEE--CCCCCEEEccccce
Confidence            99999999965 8988887653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...   .....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|.......|.+     
T Consensus       172 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-----  246 (353)
T 3txo_A          172 KEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW-----  246 (353)
T ss_dssp             BCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----
T ss_pred             eecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC-----
Confidence            753   233456789999999999999899999999999999999999999999999988888886532111110     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                ....+.+||.+||+.||.+|||
T Consensus       247 ----------------------------------------------------------~~~~~~~li~~lL~~dP~~R~~  268 (353)
T 3txo_A          247 ----------------------------------------------------------LHEDATGILKSFMTKNPTMRLG  268 (353)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHTCSSGGGSTT
T ss_pred             ----------------------------------------------------------CCHHHHHHHHHHhhhCHHHccC
Confidence                                                                      0015789999999999999999


Q ss_pred             H------HHHhcCCCcCcCCC
Q psy11727        421 P------TNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~------~e~l~Hp~~~~~~~  435 (437)
                      +      +|+++||||++.++
T Consensus       269 ~~~~~~~~~il~hp~f~~~~w  289 (353)
T 3txo_A          269 SLTQGGEHAILRHPFFKEIDW  289 (353)
T ss_dssp             SGGGTCTHHHHTSGGGTTCCH
T ss_pred             CcccCCHHHHhhCCcccCCCH
Confidence            8      89999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-49  Score=395.67  Aligned_cols=281  Identities=28%  Similarity=0.525  Sum_probs=226.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|++.+.||+|+||+||+|.+..+|+.||||++....   ....++.+|+.++..+     .||||+++++++... 
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDE   97 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBTTBCCCSEEECSCS
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCcCCCCceeeEecCC
Confidence            4678999999999999999999999999999999985432   2234566788888776     689999999999865 


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ..+|+||||++++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~--~ivH~Dlkp~NIll--~~~~~~kl~  170 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAV--NEDCELKIL  170 (367)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEEC
T ss_pred             ccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--CccccCcCHHHEEE--cCCCCEEEE
Confidence                 356999999988999988763   489999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       259 DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |||++..........++|+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+++..|.+..|.|+..++
T Consensus       171 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~  250 (367)
T 1cm8_A          171 DFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV  250 (367)
T ss_dssp             CCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             eeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence            99999988777777899999999999987 67999999999999999999999999999999999999999999999887


Q ss_pred             ccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ......  ..|+..++...                ...+..+.                  ......+.+||.+||.+||
T Consensus       251 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------~~~~~~~~~ll~~mL~~dP  296 (367)
T 1cm8_A          251 QRLQSDEAKNYMKGLPELE----------------KKDFASIL------------------TNASPLAVNLLEKMLVLDA  296 (367)
T ss_dssp             HTCSCHHHHHHHHHSCCCC----------------CCCGGGTC------------------TTCCHHHHHHHHHHSCSST
T ss_pred             HHhhhHHHHHHHHhCCCCC----------------CCCHHHHC------------------CCCCHHHHHHHHHHccCCh
Confidence            655432  22222221100                00000000                  0111257999999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||++|||+||||++..
T Consensus       297 ~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          297 EQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             TTSCCHHHHHHSGGGTTTC
T ss_pred             hHCCCHHHHhcChHHHhhc
Confidence            9999999999999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.1e-49  Score=381.99  Aligned_cols=279  Identities=32%  Similarity=0.545  Sum_probs=218.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||+||+|.+ .+++.||+|++.....   ....+.+|+.+++.+     .||||+++++++.+.+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc-----CCCCEeeeeeEEccCCeE
Confidence            6899999999999999999998 6788999999964432   234566777777665     689999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++|||+++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~kl~Dfg~~~~~  150 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR--RVLHRDLKPQNLLI--NREGELKIADFGLARAF  150 (288)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTSCEEECCTTHHHHH
T ss_pred             EEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--cCCCCEEEeECcccccc
Confidence            9999999999999887654 4689999999999999999999964  89999999999999  67889999999999765


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+....+.++...++....
T Consensus       151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             CC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc
Confidence            432   2345789999999999764 589999999999999999999999999999999999999888776544432221


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+-....     ..       ...+    ....                  .......+.+||.+||+.||.+|||++
T Consensus       231 ~~~~~~~~~-----~~-------~~~~----~~~~------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~  276 (288)
T 1ob3_A          231 LPKYDPNFT-----VY-------EPLP----WESF------------------LKGLDESGIDLLSKMLKLDPNQRITAK  276 (288)
T ss_dssp             STTCCTTCC-----CC-------CCCC----GGGT------------------CCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ccccccccc-----cc-------cCcc----HHHH------------------hhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence            111100000     00       0000    0000                  001123678999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      |+|+||||++.
T Consensus       277 e~l~hp~f~~~  287 (288)
T 1ob3_A          277 QALEHAYFKEN  287 (288)
T ss_dssp             HHHTSGGGGC-
T ss_pred             HHhcCcchhhc
Confidence            99999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1e-49  Score=388.20  Aligned_cols=253  Identities=30%  Similarity=0.482  Sum_probs=217.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+|+.||+|+++...    ........|..++..+     .||||++++++|.+.+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-----CCCCCceEeEEEEeCC
Confidence            468999999999999999999999999999999996431    1233455566666554     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||+.| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll--~~~g~~kL~Dfg~a  153 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK--DIIYRDLKPENILL--DKNGHIKITDFGFA  153 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEE--CTTSCEEECCCSSC
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChheEEE--cCCCCEEEeecCcc
Confidence            99999999965 8999987653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ........+.+||+.|+|||++.+..++.++|+|||||++|||++|.+||.+.+....+..+....-..|..        
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~--------  225 (318)
T 1fot_A          154 KYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--------  225 (318)
T ss_dssp             EECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTT--------
T ss_pred             eecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC--------
Confidence            988777778899999999999999999999999999999999999999999998888877776521111100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                                                                             ....+.+||.+||..||.+||    
T Consensus       226 -------------------------------------------------------~~~~~~~li~~lL~~dp~~R~~~~~  250 (318)
T 1fot_A          226 -------------------------------------------------------FNEDVKDLLSRLITRDLSQRLGNLQ  250 (318)
T ss_dssp             -------------------------------------------------------SCHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHhccCHHHcCCCcC
Confidence                                                                   001578999999999999999    


Q ss_pred             -CHHHHhcCCCcCcCCC
Q psy11727        420 -SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~~  435 (437)
                       |++++++||||++..+
T Consensus       251 ~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          251 NGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             TTTHHHHTSGGGSSCCH
T ss_pred             CCHHHHhcCccccCCCH
Confidence             9999999999998654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=6.3e-50  Score=408.69  Aligned_cols=283  Identities=32%  Similarity=0.515  Sum_probs=211.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-  183 (437)
                      +.++|++.+.||+|+||+||+|++..+++.||||++....   ....++.+|+.++..+     .|+|||++++++... 
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~  125 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-----NHDHVVKVLDIVIPKD  125 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-----CCCCCCceEEEEecCC
Confidence            4578999999999999999999999999999999996432   2234566788888877     689999999998543 


Q ss_pred             ----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        184 ----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       184 ----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                          +.+|+|||+++++|.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|
T Consensus       126 ~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~--~iiHrDlKp~NILl--~~~~~~kl~D  199 (458)
T 3rp9_A          126 VEKFDELYVVLEIADSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA--GILHRDLKPANCLV--NQDCSVKVCD  199 (458)
T ss_dssp             TTTCCCEEEEECCCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTCCEEECC
T ss_pred             cccCceEEEEEeccccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC--CcCCCCCChhhEEE--CCCCCEeecc
Confidence                579999999999999998765  3599999999999999999999964  89999999999999  7788999999


Q ss_pred             CCCceecCC------------------------------ccccccccccccChhhhc-CCCCCCcchHHHHHHHHHHHHh
Q psy11727        260 FGSSCHVGQ------------------------------TLYQYIQSRYYRSPEVLL-GIPYDLAIDMWSLGCILVELHT  308 (437)
Q Consensus       260 FG~s~~~~~------------------------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~ellt  308 (437)
                      ||+|+....                              .....+||+.|+|||++. +..|+.++||||||||+|||++
T Consensus       200 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          200 FGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             CTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             cccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            999976531                              234567899999999874 5679999999999999999999


Q ss_pred             -----------CCCCCCCCC--------------------HHHHHHHHHHHhCCCChhhhccCCccc--hhhcccCCCcc
Q psy11727        309 -----------GEPLFSGKN--------------------EVDQMTKIIEVLGMPPGYLLHGASKTS--KYFDRLSDNSY  355 (437)
Q Consensus       309 -----------g~~pf~~~~--------------------~~~~~~~i~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~  355 (437)
                                 |++||.+.+                    ..+++..|.+.+|.|+...+.......  .+....+... 
T Consensus       280 g~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~-  358 (458)
T 3rp9_A          280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE-  358 (458)
T ss_dssp             TSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCC-
T ss_pred             hccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCC-
Confidence                       888888765                    357889999999999988876554321  1111111000 


Q ss_pred             eeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        356 VLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                                     ...+.+.                  .......+.+||++||.+||.+|||++|||+||||++..+
T Consensus       359 ---------------~~~~~~~------------------~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          359 ---------------GTDLAER------------------FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             ---------------CCCGGGG------------------STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             ---------------CCCHHHH------------------CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence                           0000000                  0011236789999999999999999999999999998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.7e-50  Score=389.28  Aligned_cols=196  Identities=22%  Similarity=0.270  Sum_probs=158.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----  184 (437)
                      ..+|.+.+.||+|+||+||+|+.  +|+.||||++.....  .....|.++   .....++|||||++++++.+++    
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~--~~~~~e~Ei---~~~~~l~HpNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE--RSWFREAEI---YQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH--HHHHHHHHH---HTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch--hhHHHHHHH---HHHhcCCCCCCCcEEEEEEecCCCce
Confidence            45789999999999999999986  688999999964322  233333322   2234468999999999998754    


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      .+|||||||+ |+|.+++...   ++++..+..++.|++.||+|||++      +.+||||||||+||||  +.++.+||
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl--~~~~~~Ki  149 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTCCI  149 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE--CTTSCEEE
T ss_pred             EEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE--CCCCCEEE
Confidence            6899999996 5899999764   489999999999999999999975      3489999999999999  77899999


Q ss_pred             EeCCCceecCCc-------cccccccccccChhhhcCC------CCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        258 IDFGSSCHVGQT-------LYQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       258 ~DFG~s~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      +|||+|+.....       ....+||+.|||||++.+.      .|+.++|||||||++|||+||.+||...
T Consensus       150 ~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~  221 (303)
T 3hmm_A          150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             CCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             EeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcc
Confidence            999999765322       1235799999999999764      3678999999999999999999888654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.8e-49  Score=389.47  Aligned_cols=253  Identities=27%  Similarity=0.442  Sum_probs=213.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+++.||+|+++..    .........|+.++..+     .||||++++++|.+.+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~l~~~~~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-----CCCcCcceEEEEEeCC
Confidence            47899999999999999999999999999999999642    12234455677766654     7999999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll--~~~g~vkL~DFG~a  152 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR--DVVYRDIKLENLML--DKDGHIKITDFGLC  152 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeecCcCCHHHEEE--CCCCCEEEeeccch
Confidence            99999999965 8988887653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...   .......+||+.|+|||++.+..++.++|+|||||++|||++|.+||.+.+.......+....-..|..     
T Consensus       153 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-----  227 (337)
T 1o6l_A          153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT-----  227 (337)
T ss_dssp             BCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----
T ss_pred             hhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC-----
Confidence            753   233456789999999999999999999999999999999999999999988877777765421111000     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC-
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI-  419 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~-  419 (437)
                                                                                ....+.+||.+||+.||.+|| 
T Consensus       228 ----------------------------------------------------------~s~~~~~li~~lL~~dP~~R~g  249 (337)
T 1o6l_A          228 ----------------------------------------------------------LSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHTCSSTTTSTT
T ss_pred             ----------------------------------------------------------CCHHHHHHHHHHhhcCHHHhcC
Confidence                                                                      001578999999999999999 


Q ss_pred             ----CHHHHhcCCCcCcCCC
Q psy11727        420 ----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 ----t~~e~l~Hp~~~~~~~  435 (437)
                          |++|+++||||+..++
T Consensus       250 ~~~~~~~ei~~h~~f~~~~~  269 (337)
T 1o6l_A          250 GGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             CSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCCCHHHHHcCCCcCCCCH
Confidence                9999999999987654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1e-49  Score=389.73  Aligned_cols=290  Identities=35%  Similarity=0.554  Sum_probs=222.6

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .....++|++.+.||+|+||+||+|.+..+++.||||+++.....   ...+.+|+.+++.+     .||||+++++++.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~  103 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-----QHRNIIELKSVIH  103 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-----CCTTBCCEEEEEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-----CCCCcceEEEEEe
Confidence            445578999999999999999999999999999999999643321   23345677776665     7899999999999


Q ss_pred             ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC---CCCCEEEE
Q psy11727        182 WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP---KRSAIKII  258 (437)
Q Consensus       182 ~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~---~~~~ikL~  258 (437)
                      +.+.+++||||++++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+..+   ..+.+||+
T Consensus       104 ~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~~kl~  179 (329)
T 3gbz_A          104 HNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR--RCLHRDLKPQNLLLSVSDASETPVLKIG  179 (329)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred             cCCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CEECCCCCHHHEEEecCCCCccceEEEC
Confidence            999999999999999999988754  489999999999999999999964  89999999999999532   34559999


Q ss_pred             eCCCceecCC---ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        259 DFGSSCHVGQ---TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       259 DFG~s~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+.+..+.|+.
T Consensus       180 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  259 (329)
T 3gbz_A          180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD  259 (329)
T ss_dssp             CTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCch
Confidence            9999976543   23345789999999999875 4899999999999999999999999999999999999999998876


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ..++.......+....+.                .....+...+..                 .....+.+||.+||++|
T Consensus       260 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-----------------~~~~~~~~li~~~L~~d  306 (329)
T 3gbz_A          260 TTWPGVTALPDWKQSFPK----------------FRGKTLKRVLGA-----------------LLDDEGLDLLTAMLEMD  306 (329)
T ss_dssp             TTSTTGGGSTTCCTTCCC----------------CCCCCHHHHHGG-----------------GSCHHHHHHHHHHTCSS
T ss_pred             hhhhhhhhhhhhhhhhhh----------------hccccHhhhccc-----------------ccCHHHHHHHHHHccCC
Confidence            655433221111110000                000111111110                 01136789999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCCCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      |.+|||++|+|+||||++.+.+
T Consensus       307 P~~R~t~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          307 PVKRISAKNALEHPYFSHNDFD  328 (329)
T ss_dssp             GGGSCCHHHHHTSGGGSSSCSC
T ss_pred             hhhCCCHHHHhCCcccCCCCCC
Confidence            9999999999999999998765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.3e-50  Score=391.60  Aligned_cols=282  Identities=29%  Similarity=0.498  Sum_probs=220.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++|.+.+.||+|+||+||+|.+..+++.||+|++......  ...+.+|+.+++.+     .||||+++++++.+.+.++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-----CCTTBCCEEEEEECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-----CCCCCCeeeeEEeeCCEEE
Confidence            6899999999999999999999999999999999643211  11233577776655     6899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++....
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dikp~NIl~--~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ--KVLHRDLKPQNLLI--NERGELKLADFGLARAKS  151 (324)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEEESSCCGGGEEE--CTTCCEEECSSSEEECC-
T ss_pred             EEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCcCHHHEEE--CCCCCEEEccCccccccc
Confidence            999999999999887754 4689999999999999999999954  89999999999999  678899999999997654


Q ss_pred             Cc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   .....||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|+...++.....
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             CCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence            32   234578999999999987 56899999999999999999999999999999999999999999887766544332


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                      ..+...                 ..+.... ..+..               ........+.+||.+||++||.+|||++|
T Consensus       232 ~~~~~~-----------------~~~~~~~-~~~~~---------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e  278 (324)
T 3mtl_A          232 EEFKTY-----------------NYPKYRA-EALLS---------------HAPRLDSDGADLLTKLLQFEGRNRISAED  278 (324)
T ss_dssp             HHHHHT-----------------CCCCCCC-CCHHH---------------HCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             hhhccc-----------------ccccccc-hhhhh---------------hcCCCCHHHHHHHHHHcCcCcccCCCHHH
Confidence            221110                 0000000 00000               00011126789999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      +|+||||++..
T Consensus       279 ~l~hp~f~~~~  289 (324)
T 3mtl_A          279 AMKHPFFLSLG  289 (324)
T ss_dssp             HTTSGGGGGGC
T ss_pred             HhcChhhhhcc
Confidence            99999998764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.2e-49  Score=391.86  Aligned_cols=254  Identities=28%  Similarity=0.444  Sum_probs=215.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|.+.+.||+|+||+||+|+++.+++.||||+++...    ........|..++..+.    .||||++++++|.+.+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~----~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW----EHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT----TCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC----CCCCCCcEEEEEEeCC
Confidence            578999999999999999999999999999999997431    22345566777776652    7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll--~~~g~vkL~DFG~a  165 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMC  165 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEeCCCChhhEEE--CCCCCEEEeEChhh
Confidence            99999999955 8999887653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...   .......+||+.|+|||++.+..++.++|+|||||++|||++|.+||.+.+..+.+..+.......|.+     
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-----  240 (345)
T 1xjd_A          166 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW-----  240 (345)
T ss_dssp             BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----
T ss_pred             hhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcc-----
Confidence            754   233456789999999999999999999999999999999999999999999888877775421111100     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                ....+.+||.+||+.||.+|||
T Consensus       241 ----------------------------------------------------------~s~~~~~li~~lL~~dp~~R~~  262 (345)
T 1xjd_A          241 ----------------------------------------------------------LEKEAKDLLVKLFVREPEKRLG  262 (345)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHSCSSGGGSBT
T ss_pred             ----------------------------------------------------------cCHHHHHHHHHHhcCCHhHcCC
Confidence                                                                      0015789999999999999999


Q ss_pred             HH-HHhcCCCcCcCCC
Q psy11727        421 PT-NVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~-e~l~Hp~~~~~~~  435 (437)
                      +. ++++||||+..++
T Consensus       263 ~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          263 VRGDIRQHPLFREINW  278 (345)
T ss_dssp             TBSCGGGSGGGTTCCH
T ss_pred             ChHHHHcCccccCCCH
Confidence            98 9999999998764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.4e-49  Score=392.72  Aligned_cols=304  Identities=34%  Similarity=0.540  Sum_probs=242.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCC------CCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI------HSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~------~h~~iv~l~~~~~~  182 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||||++............|+.+++.+.+...      .|+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            468999999999999999999999999999999998655556677889999999876432      37899999999987


Q ss_pred             CC----EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC----CCCC
Q psy11727        183 KN----HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP----KRSA  254 (437)
Q Consensus       183 ~~----~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~----~~~~  254 (437)
                      .+    ++++|||+++++|.+++.......+++..++.++.||+.||+|||++ .||+||||||+|||++.+    ..+.
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT-TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChHHeEEeccCCCcCcce
Confidence            54    89999999988999999876656799999999999999999999953 379999999999999532    3347


Q ss_pred             EEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN------EVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~  328 (437)
                      +||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|++||.+.+      ..+.+..+.+.
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  256 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence            999999999988777777789999999999999999999999999999999999999998765      56778889999


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ++.+|..++........+|+.......          ........+..++..           ....+......+.+||.
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~li~  315 (373)
T 1q8y_A          257 LGELPSYLLRNGKYTRTFFNSRGLLRN----------ISKLKFWPLEDVLTE-----------KYKFSKDEAKEISDFLS  315 (373)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSS----------CCCCCBCCHHHHHHH-----------TTCCCHHHHHHHHHHHG
T ss_pred             cCCCCHHHHhccchhhhhcCCcchhcc----------cccccccchhhhhhh-----------cccCCcchHHHHHHHHH
Confidence            999999998877766666653221000          000000011111111           01123344557899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +||+.||.+|||+.|+|+||||++..
T Consensus       316 ~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          316 PMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             GGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHhccCccccCCHHHHhhChhhhccc
Confidence            99999999999999999999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=8.6e-49  Score=397.49  Aligned_cols=284  Identities=30%  Similarity=0.492  Sum_probs=224.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++....   ....++.+|+.+++.+     .|+||+++++++...
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-----KSDYIIRLYDLIIPD   97 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCS
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-----CCCCcceEEEEEecC
Confidence            34679999999999999999999999999999999997432   2234566788888877     689999999999876


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           +.+|+|||+++++|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~--givHrDlkp~NILl--~~~~~~kL~  171 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES--GIIHRDLKPANCLL--NQDCSVKVC  171 (432)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEEC
T ss_pred             CCCcCCeEEEEEecCCcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCHHHeEE--CCCCCEEEc
Confidence                 679999999999999998764  3589999999999999999999964  89999999999999  778899999


Q ss_pred             eCCCceecCCc-------------------------cccccccccccChhhh-cCCCCCCcchHHHHHHHHHHHHh----
Q psy11727        259 DFGSSCHVGQT-------------------------LYQYIQSRYYRSPEVL-LGIPYDLAIDMWSLGCILVELHT----  308 (437)
Q Consensus       259 DFG~s~~~~~~-------------------------~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~ellt----  308 (437)
                      |||+|+.....                         ....+||+.|+|||++ .+..|+.++|||||||++|||++    
T Consensus       172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  251 (432)
T 3n9x_A          172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS  251 (432)
T ss_dssp             CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred             cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence            99999765322                         3567899999999987 45579999999999999999998    


Q ss_pred             -------CCCCCCCCC-----------------HHHHHHHHHHHhCCCChhhhccCCccc--hhhcccCCCcceeccccc
Q psy11727        309 -------GEPLFSGKN-----------------EVDQMTKIIEVLGMPPGYLLHGASKTS--KYFDRLSDNSYVLKKSTD  362 (437)
Q Consensus       309 -------g~~pf~~~~-----------------~~~~~~~i~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  362 (437)
                             |.++|.+.+                 ..+++..|.+.+|.|+...+.......  .+....+..         
T Consensus       252 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~---------  322 (432)
T 3n9x_A          252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHR---------  322 (432)
T ss_dssp             TCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC---------
T ss_pred             cccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCC---------
Confidence                   667777765                 468899999999999988776543321  111111100         


Q ss_pred             cccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        363 TRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                             ....+....              +    .....+.+||++||++||.+|||++|||+||||++..+
T Consensus       323 -------~~~~~~~~~--------------~----~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          323 -------KPINLKQKY--------------P----SISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             -------CCCCHHHHS--------------T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             -------CCCCHHHHC--------------C----CCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                   000000000              0    01126789999999999999999999999999998754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.8e-49  Score=394.06  Aligned_cols=254  Identities=23%  Similarity=0.412  Sum_probs=209.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.++||+|+||+||+|+++.+++.||+|++++..    ........|..++..+.    .|||||+++++|.+.+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~----~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTES  126 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT----TCTTBCCEEEEEECSS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC----CCCCcCeeEEEEEECC
Confidence            578999999999999999999999999999999997432    23345677888887764    6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+|
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~--givHrDLKp~NILl--~~~g~ikL~DFGla  200 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER--GIIYRDLKLDNVLL--DSEGHIKLTDYGMC  200 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CEEeccCCHHHEEE--CCCCCEEEeeccee
Confidence            99999999965 8888887653  599999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHHHhCC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE---------VDQMTKIIEVLGM  331 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~---------~~~~~~i~~~~~~  331 (437)
                      +..   .....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+...         ....+.+....-.
T Consensus       201 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~  280 (396)
T 4dc2_A          201 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR  280 (396)
T ss_dssp             BCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC
T ss_pred             eecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC
Confidence            752   3445567899999999999999999999999999999999999999965321         1122222221000


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                                                          .|.                           .....+.+||++||
T Consensus       281 ------------------------------------~p~---------------------------~~s~~~~~li~~lL  297 (396)
T 4dc2_A          281 ------------------------------------IPR---------------------------SLSVKAASVLKSFL  297 (396)
T ss_dssp             ------------------------------------CCT---------------------------TSCHHHHHHHHHHT
T ss_pred             ------------------------------------CCC---------------------------cCCHHHHHHHHHHh
Confidence                                                000                           00125789999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCcCcCCC
Q psy11727        412 TYDPKKRISP------TNVLRHEFFLKHSV  435 (437)
Q Consensus       412 ~~dP~~R~t~------~e~l~Hp~~~~~~~  435 (437)
                      +.||.+|||+      +|+++||||++.++
T Consensus       298 ~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          298 NKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             CSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             cCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence            9999999995      79999999998764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.9e-49  Score=390.03  Aligned_cols=253  Identities=27%  Similarity=0.450  Sum_probs=217.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+++.||||++....    ........|+.++..+     .||||++++++|.+.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEcCC
Confidence            578999999999999999999999999999999996432    1233455566666544     7899999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++ ++|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~NIll--~~~g~~kL~DFg~a  188 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS--LDLIYRDLKPENLLI--DQQGYIQVTDFGFA  188 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH--CCcccccCccceEEE--CCCCCEEEcccccc
Confidence            9999999995 58999988753  58999999999999999999995  489999999999999  77889999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+.......|..        
T Consensus       189 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~--------  260 (350)
T 1rdq_E          189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--------  260 (350)
T ss_dssp             EECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT--------
T ss_pred             eeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCC--------
Confidence            988777777899999999999999999999999999999999999999999998888887776531111100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC---
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS---  420 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t---  420 (437)
                                                                             ....+.+||.+||+.||.+||+   
T Consensus       261 -------------------------------------------------------~~~~~~~li~~lL~~dp~~R~~~~~  285 (350)
T 1rdq_E          261 -------------------------------------------------------FSSDLKDLLRNLLQVDLTKRFGNLK  285 (350)
T ss_dssp             -------------------------------------------------------CCHHHHHHHHHHSCSCTTTCTTSST
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHhhcCHHhccCCcc
Confidence                                                                   0015789999999999999999   


Q ss_pred             --HHHHhcCCCcCcCCC
Q psy11727        421 --PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 --~~e~l~Hp~~~~~~~  435 (437)
                        ++++++||||+..++
T Consensus       286 ~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          286 NGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTTHHHHTSGGGTTCCH
T ss_pred             CCHHHHHhCcCcCCCCH
Confidence              999999999987654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=7.4e-49  Score=387.54  Aligned_cols=291  Identities=31%  Similarity=0.520  Sum_probs=219.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC---
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN---  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~---  184 (437)
                      ..++|++.+.||+|+||+||+|.+..+++.||||++............++..+..+     .||||++++++|...+   
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-----~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-----HHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-----CCTTBCCEEEEEEEECSSC
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-----CCCCcccHHHhhhcccccc
Confidence            36789999999999999999999999999999999976655555666666666665     6899999999997643   


Q ss_pred             ----EEEEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        185 ----HLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       185 ----~~~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                          ++++||||++++|.+.+..  .....+++..++.++.||+.||.|||.+..||+||||||+|||++ ..++.+||+
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~-~~~~~~kl~  174 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN-EADGTLKLC  174 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE-TTTTEEEEC
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe-CCCCcEEEe
Confidence                3899999999998876653  233568999999999999999999995556899999999999994 237789999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |||++......  .....||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+....+..+....+.|+..
T Consensus       175 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          175 DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             eCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence            99999866432  34567899999999997654 8999999999999999999999999999999999999999999988


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ++.........++....                . ...+....              +.........+.+||.+||++||
T Consensus       255 ~~~~~~~~~~~~~~~~~----------------~-~~~~~~~~--------------~~~~~~~~~~~~~li~~~L~~dP  303 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNS----------------K-GIPWSNVF--------------SDHSLKDAKEAYDLLSALLQYLP  303 (360)
T ss_dssp             HHHHHCTTCCCGGGGCC----------------C-CCCHHHHT--------------TTCCCTTHHHHHHHHHHHTCSSG
T ss_pred             HHHhcccchhhcccccc----------------c-cCCccccc--------------chhhccccHHHHHHHHHHhccCc
Confidence            77544322111110000                0 00000000              01111223468999999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCCC
Q psy11727        416 KKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+|||+.|+|+||||++..+
T Consensus       304 ~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          304 EERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             GGSCCHHHHTTSGGGGGGGC
T ss_pred             cccCCHHHHhcCccccccCC
Confidence            99999999999999998643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-48  Score=381.95  Aligned_cols=259  Identities=29%  Similarity=0.461  Sum_probs=217.5

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      +.+.++|.+.+.||+|+||+||+|.+..+++.||+|++.....       ....+.+|+.++..+     .||||+++++
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~   81 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHE   81 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-----CCCCCCcEEE
Confidence            3456789999999999999999999999999999999975332       235677899988887     6899999999


Q ss_pred             eeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC----
Q psy11727        179 HFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS----  253 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~----  253 (437)
                      +|.+.+.+++||||++ ++|.+++...  ..+++..++.++.||+.||.|||+  .||+||||||+|||+.  .++    
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~--~~ivH~Dlkp~NIll~--~~~~~~~  155 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS--LQIAHFDLKPENIMLL--DRNVPKP  155 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEES--CSSSSSC
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHH--CCeEcCCCCHHHEEEe--cCCCCCC
Confidence            9999999999999995 4899988654  458999999999999999999995  4899999999999994  444    


Q ss_pred             CEEEEeCCCceecC--CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||++....  .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  235 (326)
T ss_dssp             CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence            79999999998764  3334567999999999999999999999999999999999999999999888777777553322


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      .+.......                                                           ...+.+||.+||
T Consensus       236 ~~~~~~~~~-----------------------------------------------------------~~~~~~li~~~L  256 (326)
T 2y0a_A          236 FEDEYFSNT-----------------------------------------------------------SALAKDFIRRLL  256 (326)
T ss_dssp             CCHHHHTTS-----------------------------------------------------------CHHHHHHHHHHS
T ss_pred             cCccccccC-----------------------------------------------------------CHHHHHHHHHHc
Confidence            222111100                                                           015789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +.||.+|||++|+|+||||++..
T Consensus       257 ~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          257 VKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             CSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             cCChhhCCCHHHHhcCCCccCCc
Confidence            99999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3e-49  Score=386.11  Aligned_cols=283  Identities=25%  Similarity=0.359  Sum_probs=226.4

Q ss_pred             CCCCCCCCCcceeecCceeccCeeee-ceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhh
Q psy11727         90 NDGHDDENYDYIIKHGEKFLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINK  165 (437)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~y~i~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~  165 (437)
                      ..|.|..+.+..+...+.+.++|.+. +.||+|+||+||+|.+..+++.||+|++....   .....+..|+.++..+. 
T Consensus         8 ~~~~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-   86 (327)
T 3lm5_A            8 SSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK-   86 (327)
T ss_dssp             --------CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT-
T ss_pred             cccccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc-
Confidence            44667777777888889999999998 89999999999999999999999999997432   22356677888888774 


Q ss_pred             cCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       166 ~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                         .||||+++++++.+.+.+++||||+.+ +|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|
T Consensus        87 ---~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~--givH~Dikp~N  161 (327)
T 3lm5_A           87 ---SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN--NIVHLDLKPQN  161 (327)
T ss_dssp             ---TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGG
T ss_pred             ---CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--CeecCcCChHH
Confidence               579999999999999999999999966 888888665556799999999999999999999964  89999999999


Q ss_pred             EEEecC-CCCCEEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy11727        245 ILLCSP-KRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ  321 (437)
Q Consensus       245 Ill~~~-~~~~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~  321 (437)
                      ||++.. ..+.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus       162 Il~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  241 (327)
T 3lm5_A          162 ILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET  241 (327)
T ss_dssp             EEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH
Confidence            999421 2678999999999876443  2456799999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+......++.....                                                           ....
T Consensus       242 ~~~i~~~~~~~~~~~~~-----------------------------------------------------------~~~~  262 (327)
T 3lm5_A          242 YLNISQVNVDYSEETFS-----------------------------------------------------------SVSQ  262 (327)
T ss_dssp             HHHHHHTCCCCCTTTTT-----------------------------------------------------------TSCH
T ss_pred             HHHHHhcccccCchhhc-----------------------------------------------------------ccCH
Confidence            77765543222211100                                                           0012


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCCCC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~  437 (437)
                      .+.+||.+||+.||.+|||++++|+||||++...++
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~  298 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN  298 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhCCHhhccccccc
Confidence            578999999999999999999999999999887653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.3e-49  Score=393.23  Aligned_cols=282  Identities=30%  Similarity=0.568  Sum_probs=211.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++....   .......+|+.+++.+     .||||+++++++...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~  100 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPA  100 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEecC
Confidence            44689999999999999999999999999999999996432   2234556788888776     689999999998754


Q ss_pred             ------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 ------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                            ..+|+|||+++++|.+++..   ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~--~givH~Dlkp~NIll--~~~~~~kL  173 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAV--NEDCELKI  173 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEE--CTTCCEEE
T ss_pred             CccccCCeEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHhhEEE--CCCCCEEE
Confidence                  57899999998899988875   358999999999999999999996  489999999999999  67889999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +|||++..........+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.+..+++..|.+..|.|+...
T Consensus       174 ~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~  253 (367)
T 2fst_X          174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL  253 (367)
T ss_dssp             CC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             eeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999999887776677889999999999987 6799999999999999999999999999999999999999999999888


Q ss_pred             hccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      +......  ..+...++..               +. ..+..+.                  ......+.+||.+||++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~~------------------~~~~~~~~dLl~~mL~~d  299 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQM---------------PK-MNFANVF------------------IGANPLAVDLLEKMLVLD  299 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCC---------------CC-CCHHHHT------------------TTCCHHHHHHHHHHSCSS
T ss_pred             HHHhhhHHHHHHHhccCCC---------------CC-CCHHHHC------------------CCCCHHHHHHHHHhCCCC
Confidence            7655432  1222211100               00 0011110                  001125799999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |.+|||+.|+|+||||++..
T Consensus       300 P~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          300 SDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             GGGSCCHHHHHTSGGGTTTC
T ss_pred             cccCcCHHHHhcChhhhhcc
Confidence            99999999999999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=5.3e-49  Score=399.77  Aligned_cols=260  Identities=29%  Similarity=0.396  Sum_probs=216.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ...+.++|++.+.||+|+||+||+|.+..+|+.||+|++.....   ....+.+|+.++..+     .||||+++++++.
T Consensus         6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~   80 (444)
T 3soa_A            6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSIS   80 (444)
T ss_dssp             -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-----CBTTBCCEEEEEE
T ss_pred             cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCcCCCeEEEEEE
Confidence            34567899999999999999999999999999999999975432   223466788888776     6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEEEe
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIID  259 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL~D  259 (437)
                      +.+..|+||||+.| +|.+.+....  .+++..+..++.||+.||.|||++  ||+||||||+|||++.+ .++.+||+|
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~--givHrDlKp~NIll~~~~~~~~vkL~D  156 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM--GVVHRNLKPENLLLASKLKGAAVKLAD  156 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCHHHEEEeccCCCCcEEEcc
Confidence            99999999999965 8999887754  589999999999999999999964  89999999999999543 457899999


Q ss_pred             CCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        260 FGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       260 FG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ||++......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+....+.......+...
T Consensus       157 FG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~  236 (444)
T 3soa_A          157 FGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE  236 (444)
T ss_dssp             CSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred             CceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccc
Confidence            9999766433   2356899999999999999999999999999999999999999999998888888766432222110


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      ++                                                           .....+.+||.+||+.||.
T Consensus       237 ~~-----------------------------------------------------------~~s~~~~~li~~~L~~dP~  257 (444)
T 3soa_A          237 WD-----------------------------------------------------------TVTPEAKDLINKMLTINPS  257 (444)
T ss_dssp             TT-----------------------------------------------------------TSCHHHHHHHHHHSCSSTT
T ss_pred             cc-----------------------------------------------------------cCCHHHHHHHHHHcCCChh
Confidence            00                                                           0012578999999999999


Q ss_pred             CCCCHHHHhcCCCcCc
Q psy11727        417 KRISPTNVLRHEFFLK  432 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~  432 (437)
                      +|||+.|+|+||||++
T Consensus       258 ~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          258 KRITAAEALKHPWISH  273 (444)
T ss_dssp             TSCCHHHHHHSCTTHH
T ss_pred             HCCCHHHHhcCccccC
Confidence            9999999999999964

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.5e-48  Score=376.20  Aligned_cols=253  Identities=25%  Similarity=0.369  Sum_probs=212.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||++..... ....+..|+.++..+     .||||++++++|...+.++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   93 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   93 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-----CCCCCCeEeEEEEECCEEE
Confidence            5689999999999999999999999999999999864332 234566788877775     7899999999999999999


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+. ++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~Dlkp~Nil~--~~~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN--QVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTCCEEECCCTTCEEC
T ss_pred             EEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC--CceeCCCCHHHEEE--CCCCCEEEeeCCCceec
Confidence            9999995 5899988765   489999999999999999999964  89999999999999  67888999999999766


Q ss_pred             CCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...   .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+..........        
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------  238 (297)
T 3fxz_A          167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN--------  238 (297)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSC--------
T ss_pred             CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC--------
Confidence            432   335679999999999999999999999999999999999999999988877666654431111000        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                          +......+.+||.+||+.||.+|||+.|
T Consensus       239 ----------------------------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e  266 (297)
T 3fxz_A          239 ----------------------------------------------------PEKLSAIFRDFLNRCLEMDVEKRGSAKE  266 (297)
T ss_dssp             ----------------------------------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ----------------------------------------------------ccccCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                                0000125789999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +|+||||+..
T Consensus       267 ll~h~~~~~~  276 (297)
T 3fxz_A          267 LLQHQFLKIA  276 (297)
T ss_dssp             HTTCGGGGGC
T ss_pred             HhhChhhccc
Confidence            9999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=6.5e-49  Score=390.49  Aligned_cols=293  Identities=31%  Similarity=0.533  Sum_probs=219.8

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++....   .....+.+|+.+++.+     .||||+++++++...
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~   96 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQ   96 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSC
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-----CCCCccceEEeeccc
Confidence            35689999999999999999999999999999999997432   2234456677777766     689999999999866


Q ss_pred             C------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 N------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +      .+|+||||++++|.+.+..    .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus        97 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~NIl~--~~~~~~kl  168 (371)
T 2xrw_A           97 KSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVV--KSDCTLKI  168 (371)
T ss_dssp             CSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTSCEEE
T ss_pred             cccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC--CeecccCCHHHEEE--cCCCCEEE
Confidence            5      8999999999999988863    389999999999999999999964  89999999999999  67889999


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.+.++.|+..
T Consensus       169 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  248 (371)
T 2xrw_A          169 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE  248 (371)
T ss_dssp             CCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHH
T ss_pred             EEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            999999776443  345688999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hhccCCccch-hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        336 LLHGASKTSK-YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       336 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ++........ ++...+.  +             .. ..+.....      ..........+......+.+||.+||++|
T Consensus       249 ~~~~~~~~~~~~~~~~~~--~-------------~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~li~~mL~~d  306 (371)
T 2xrw_A          249 FMKKLQPTVRTYVENRPK--Y-------------AG-YSFEKLFP------DVLFPADSEHNKLKASQARDLLSKMLVID  306 (371)
T ss_dssp             HHTTSCHHHHHHHHSSCC--C-------------CC-CCHHHHSC------GGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHhhhHHHHHHhhCcc--c-------------cc-cchhhhcc------cccCcccccccccccHHHHHHHHHHCcCC
Confidence            7765543321 1111000  0             00 00000000      00000000011122346899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |.+|||++|+|+||||+...
T Consensus       307 P~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          307 ASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             GGGSCCHHHHHHSHHHHTTC
T ss_pred             hhhCCCHHHHhCCcchhhhc
Confidence            99999999999999998643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4e-49  Score=396.52  Aligned_cols=257  Identities=26%  Similarity=0.390  Sum_probs=216.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+++.||+|++...    ......+..|+.++..+     .|||||+++++|.+.+
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECC
Confidence            57899999999999999999999999999999999642    22234567788888776     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+||||++| +|.+++...   .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||+|
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~--~givHrDLKp~NILl--~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLL--DKSGHLKLADFGTC  215 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeeE--CCCCCEEEecccee
Confidence            99999999955 899888764   48999999999999999999996  489999999999999  78889999999999


Q ss_pred             eecCCc----cccccccccccChhhhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQT----LYQYIQSRYYRSPEVLLGIP----YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......    ..+.+||+.|+|||++.+..    |+.++|||||||++|||++|++||.+.+..+.+.+|+.......  
T Consensus       216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--  293 (410)
T 3v8s_A          216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT--  293 (410)
T ss_dssp             EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC--
T ss_pred             EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccccc--
Confidence            876543    23678999999999998765    88999999999999999999999999999888888865311000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|....                         ....+++||.+||..+|
T Consensus       294 --------------------------------~p~~~~-------------------------~s~~~~~li~~lL~~~~  316 (410)
T 3v8s_A          294 --------------------------------FPDDND-------------------------ISKEAKNLICAFLTDRE  316 (410)
T ss_dssp             --------------------------------CCTTCC-------------------------CCHHHHHHHHHHSSCGG
T ss_pred             --------------------------------CCCccc-------------------------ccHHHHHHHHHHccChh
Confidence                                            000000                         00157899999999999


Q ss_pred             CC--CCCHHHHhcCCCcCcCCCC
Q psy11727        416 KK--RISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       416 ~~--R~t~~e~l~Hp~~~~~~~~  436 (437)
                      .+  |+|++|+++||||+...++
T Consensus       317 ~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          317 VRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             GCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             hhCCCCCHHHHhcCccccCCCHH
Confidence            88  9999999999999987653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4.6e-49  Score=388.91  Aligned_cols=254  Identities=26%  Similarity=0.399  Sum_probs=213.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|++..+++.||||+++...    ........|..++..+.    .||+|++++++|++.+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT----CCTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC----CCCEEeeEEEEEEcCC
Confidence            578999999999999999999999999999999997432    12233445555554432    7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++| +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIll--~~~g~vkL~DFG~a  168 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK--GIIYRDLKLDNVML--DSEGHIKIADFGMC  168 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CEEeccCCHHHEEE--cCCCcEEEEeCCcc
Confidence            99999999965 8999887653  489999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...   .......+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+..|....-..|..     
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-----  243 (353)
T 2i0e_A          169 KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-----  243 (353)
T ss_dssp             BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----
T ss_pred             cccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCC-----
Confidence            763   233456789999999999999999999999999999999999999999999888888876521111100     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                ....+.+||.+||+.||.+||+
T Consensus       244 ----------------------------------------------------------~s~~~~~li~~lL~~dP~~R~~  265 (353)
T 2i0e_A          244 ----------------------------------------------------------MSKEAVAICKGLMTKHPGKRLG  265 (353)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHTCSCTTSCTT
T ss_pred             ----------------------------------------------------------CCHHHHHHHHHHhhcCHHHcCC
Confidence                                                                      0015789999999999999994


Q ss_pred             -----HHHHhcCCCcCcCCC
Q psy11727        421 -----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 -----~~e~l~Hp~~~~~~~  435 (437)
                           ++++++||||+..++
T Consensus       266 ~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          266 CGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             CSTTHHHHHHTSGGGTTCCH
T ss_pred             CCCCCHHHHhcCccccCCCH
Confidence                 699999999997654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.2e-48  Score=388.32  Aligned_cols=281  Identities=31%  Similarity=0.565  Sum_probs=220.7

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----  182 (437)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++......   ..+|+.+++.+     .|+|||+++++|..     
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVL-----DHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTC-----CCTTBCCEEEEEEEC----
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHc-----CCCCccchhheeeecCccc
Confidence            457899999999999999999999999999999999754332   23588887666     78999999999843     


Q ss_pred             ---------------------------------CCEEEEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHH
Q psy11727        183 ---------------------------------KNHLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAF  227 (437)
Q Consensus       183 ---------------------------------~~~~~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~  227 (437)
                                                       ..++++||||++++|.+.+..  .....+++..++.++.||+.||+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                             345999999999998887764  233569999999999999999999


Q ss_pred             hcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC--CccccccccccccChhhhcCC-CCCCcchHHHHHHHHH
Q psy11727        228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILV  304 (437)
Q Consensus       228 LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~  304 (437)
                      ||+  .||+||||||+|||++ ..++.+||+|||+|....  .......||+.|+|||++.+. .++.++|||||||++|
T Consensus       157 LH~--~gi~H~Dikp~Nil~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          157 IHS--LGICHRDIKPQNLLVN-SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             HHT--TTEECSCCCGGGEEEE-TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHH--CcCccCccCHHHEEEc-CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence            995  4899999999999994 256789999999998653  334567889999999999875 4899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCC
Q psy11727        305 ELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGG  384 (437)
Q Consensus       305 elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (437)
                      +|++|++||.+.+..+++..++..+|.|+...+......   +...   .+.           ......+..++.     
T Consensus       234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~---~~~~---~~~-----------~~~~~~~~~~~~-----  291 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH---YTEV---RFP-----------TLKAKDWRKILP-----  291 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTT---C--C---CCC-----------CCCCCCHHHHSC-----
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcc---cccc---cCC-----------ccCcccHHhhCC-----
Confidence            999999999999999999999999999987765433211   0000   000           000000111100     


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        385 PGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                                  ......+.+||.+||++||.+|||+.|+|+||||++.
T Consensus       292 ------------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          292 ------------EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             ------------TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             ------------CCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence                        0011257899999999999999999999999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.8e-48  Score=381.65  Aligned_cols=285  Identities=27%  Similarity=0.453  Sum_probs=225.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||++....   .....+.+|+.++..+     .|+||+++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCcccHhheeecccc
Confidence            578999999999999999999999999999999986432   2234667888888887     68999999999987   


Q ss_pred             -----CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        183 -----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       183 -----~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                           .+.+++||||++++|.+.+.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIl~--~~~~~~kl  165 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN--KILHRDMKAANVLI--TRDGVLKL  165 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEE
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCHHHEEE--cCCCCEEE
Confidence                 45799999999999998887654 4599999999999999999999964  89999999999999  67889999


Q ss_pred             EeCCCceecCC-------ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        258 IDFGSSCHVGQ-------TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       258 ~DFG~s~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      +|||++.....       ......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+..+....
T Consensus       166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~  245 (351)
T 3mi9_A          166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  245 (351)
T ss_dssp             CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            99999976531       2234578999999999986 458999999999999999999999999999999999999998


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      +.++...++....... +.....              .......+.+.+..                ......+.+||.+
T Consensus       246 ~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~----------------~~~~~~~~~li~~  294 (351)
T 3mi9_A          246 GSITPEVWPNVDNYEL-YEKLEL--------------VKGQKRKVKDRLKA----------------YVRDPYALDLIDK  294 (351)
T ss_dssp             CCCCTTTSTTGGGCGG-GTSSCC--------------CSSCCCCHHHHHHH----------------HHCCHHHHHHHHH
T ss_pred             CCCChhhccccccchh-hccccc--------------ccccccCHHHHhhh----------------ccCChHHHHHHHH
Confidence            8887766554332211 111000              00000000000000                0001257899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ||++||.+|||++|+|+||||+...
T Consensus       295 ~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          295 LLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             HhcCChhhCCCHHHHhCCCCcCCCC
Confidence            9999999999999999999998754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.2e-48  Score=387.29  Aligned_cols=265  Identities=30%  Similarity=0.424  Sum_probs=217.4

Q ss_pred             ceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       100 ~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      +.......+.++|++.+.||+|+||.||+|.+..+++.||+|++.....   ....+.+|+.++..+     .||||+++
T Consensus        19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~   93 (362)
T 2bdw_A           19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRL   93 (362)
T ss_dssp             -----CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCE
T ss_pred             EeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCCCeE
Confidence            3444566778899999999999999999999999999999999975432   234566788888876     68999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCC
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~  254 (437)
                      ++++.+.+..|+||||+.+ +|.+.+....  .+++..++.++.||+.||.|||++  ||+||||||+|||++.+. .+.
T Consensus        94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~--~ivH~Dlkp~NIll~~~~~~~~  169 (362)
T 2bdw_A           94 HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN--GIVHRNLKPENLLLASKAKGAA  169 (362)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEESCSSTTCC
T ss_pred             EEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCchHHEEEecCCCCCC
Confidence            9999999999999999965 8988887653  589999999999999999999964  899999999999995432 356


Q ss_pred             EEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        255 IKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       255 ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      +||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+....+.......
T Consensus       170 ~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~  249 (362)
T 2bdw_A          170 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY  249 (362)
T ss_dssp             EEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             EEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            999999999776432  235689999999999999999999999999999999999999999998888777776542221


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +...+.          .                                                 ....+.+||.+||+
T Consensus       250 ~~~~~~----------~-------------------------------------------------~~~~~~~li~~~L~  270 (362)
T 2bdw_A          250 PSPEWD----------T-------------------------------------------------VTPEAKSLIDSMLT  270 (362)
T ss_dssp             CTTGGG----------G-------------------------------------------------SCHHHHHHHHHHSC
T ss_pred             Cccccc----------C-------------------------------------------------CCHHHHHHHHHHcC
Confidence            111000          0                                                 01257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCc
Q psy11727        413 YDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      .||.+|||+.|+|+||||+.
T Consensus       271 ~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          271 VNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             SSGGGSCCHHHHTTSHHHHT
T ss_pred             CChhhCcCHHHHhcCcccCC
Confidence            99999999999999999964

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.6e-48  Score=376.85  Aligned_cols=258  Identities=25%  Similarity=0.293  Sum_probs=203.2

Q ss_pred             eecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccch---HHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN---QAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       102 ~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~---~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      ...++.+.++|++.+.||+|+||+||+|.+..+++.||||++........   ....|+..+..+    ..|+||+++++
T Consensus        49 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~----~~h~~iv~l~~  124 (311)
T 3p1a_A           49 SRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV----GQHPCCVRLEQ  124 (311)
T ss_dssp             TSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH----CCCTTBCCEEE
T ss_pred             CCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh----cCCCcEEEEEE
Confidence            34566677899999999999999999999999999999999864332222   222233333322    27899999999


Q ss_pred             eeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        179 HFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +|.+.+.+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIll--~~~~~~kl~  199 (311)
T 3p1a_A          125 AWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ--GLVHLDVKPANIFL--GPRGRCKLG  199 (311)
T ss_dssp             EEEETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CGGGCEEEC
T ss_pred             EEEeCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CEecCCCCHHHEEE--CCCCCEEEc
Confidence            999999999999999999999887764 4699999999999999999999964  89999999999999  678889999


Q ss_pred             eCCCceecCCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||++.......  ....||+.|+|||++.+ .++.++|||||||++|||++|..||.+....   ..+..  +..+..+
T Consensus       200 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~---~~~~~--~~~~~~~  273 (311)
T 3p1a_A          200 DFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW---QQLRQ--GYLPPEF  273 (311)
T ss_dssp             CCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH---HHHTT--TCCCHHH
T ss_pred             cceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHhc--cCCCccc
Confidence            999997764432  34568999999999987 7999999999999999999998776653322   22211  1111111


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      ...                                                           ....+.+||.+||+.||.
T Consensus       274 ~~~-----------------------------------------------------------~~~~l~~li~~~L~~dP~  294 (311)
T 3p1a_A          274 TAG-----------------------------------------------------------LSSELRSVLVMMLEPDPK  294 (311)
T ss_dssp             HTT-----------------------------------------------------------SCHHHHHHHHHHSCSSTT
T ss_pred             ccC-----------------------------------------------------------CCHHHHHHHHHHcCCChh
Confidence            000                                                           012679999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.|+|+||||++.
T Consensus       295 ~Rpt~~ell~hp~~~~p  311 (311)
T 3p1a_A          295 LRATAEALLALPVLRQP  311 (311)
T ss_dssp             TSCCHHHHHTSGGGSCC
T ss_pred             hCcCHHHHHhCccccCC
Confidence            99999999999999873

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.3e-48  Score=395.91  Aligned_cols=260  Identities=25%  Similarity=0.371  Sum_probs=217.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ...++|++.++||+|+||+||+|++..+++.||+|++...    ......+..|+.++..+     .||||++++++|.+
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-----DSKWITTLHYAFQD  145 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-----CTTTBCCEEEEEEC
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEee
Confidence            3467899999999999999999999999999999999642    12223466788887765     78999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+|+||||+. |+|.+++.... ..+++..++.++.||+.||.|||+  .|||||||||+|||+  +.++.+||+|||
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~--~giiHrDLKp~NILl--~~~g~vkL~DFG  220 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILM--DMNGHIRLADFG  220 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTSCEEECCCT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeeE--cCCCCEEEcchh
Confidence            999999999995 58999987643 459999999999999999999995  489999999999999  778899999999


Q ss_pred             CceecCCc----cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC--
Q psy11727        262 SSCHVGQT----LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG--  330 (437)
Q Consensus       262 ~s~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~--  330 (437)
                      +|......    ....+||+.|+|||++.     +..|+.++|||||||++|||++|++||.+.+..+.+.+|+....  
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~  300 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF  300 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc
Confidence            99765332    23468999999999997     56789999999999999999999999999999888888864311  


Q ss_pred             -CCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        331 -MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       331 -~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                       .|.. .                                                            ......+++||++
T Consensus       301 ~~p~~-~------------------------------------------------------------~~~s~~~~dLi~~  319 (437)
T 4aw2_A          301 QFPTQ-V------------------------------------------------------------TDVSENAKDLIRR  319 (437)
T ss_dssp             CCCSS-C------------------------------------------------------------CCSCHHHHHHHHT
T ss_pred             cCCcc-c------------------------------------------------------------ccCCHHHHHHHHH
Confidence             1100 0                                                            0001257899999


Q ss_pred             ccccCCCC--CCCHHHHhcCCCcCcCCCCC
Q psy11727        410 MLTYDPKK--RISPTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       410 ~L~~dP~~--R~t~~e~l~Hp~~~~~~~~~  437 (437)
                      ||..+|++  |++++|+++||||++.++++
T Consensus       320 lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          320 LICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             TSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             HhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence            99999888  99999999999999987763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-48  Score=388.03  Aligned_cols=261  Identities=25%  Similarity=0.423  Sum_probs=215.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|++..... ....+.+|+.++..+     .||||++++++|.+.+.
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSE
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-----CCcCCCeEEEEEEeCCE
Confidence            346789999999999999999999999999999999975432 223456677776655     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||++.+..+.+||+|||++.
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDlkp~NIll~~~~~~~vkL~DFG~a~  199 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH--SIVHLDIKPENIMCETKKASSVKIIDFGLAT  199 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred             EEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeecccchHHeEEecCCCCceEEEecccce
Confidence            9999999965 8988887543 4589999999999999999999964  8999999999999965566789999999998


Q ss_pred             ecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        265 HVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       265 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .....  ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+.......+...      
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~------  273 (387)
T 1kob_A          200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA------  273 (387)
T ss_dssp             ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST------
T ss_pred             ecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc------
Confidence            76433  3346799999999999999999999999999999999999999999988777777654211111000      


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                          +.                                                 .....+.+||.+||+.||.+|||+.
T Consensus       274 ----~~-------------------------------------------------~~s~~~~~li~~~L~~dP~~Rpt~~  300 (387)
T 1kob_A          274 ----FS-------------------------------------------------SVSPEAKDFIKNLLQKEPRKRLTVH  300 (387)
T ss_dssp             ----TT-------------------------------------------------TSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             ----cc-------------------------------------------------cCCHHHHHHHHHHcCCChhHCcCHH
Confidence                00                                                 0012578999999999999999999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      |+|+||||+...
T Consensus       301 ell~hp~~~~~~  312 (387)
T 1kob_A          301 DALEHPWLKGDH  312 (387)
T ss_dssp             HHHTSTTTSSCC
T ss_pred             HHhhCccccCCc
Confidence            999999998643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.3e-47  Score=371.08  Aligned_cols=284  Identities=31%  Similarity=0.478  Sum_probs=215.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++......   ...+..|+.++..+     .||||+++++++...+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-----KHPNLVNLLEVFRRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCCccchhheeecCCe
Confidence            57899999999999999999999999999999998644322   23455677777776     68999999999999999


Q ss_pred             EEEEEEeccCc-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSYN-LYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~~-L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .++||||++++ |.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++.
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~--~ivH~dlkp~Nil~--~~~~~~kl~Dfg~~~  150 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH--NCIHRDVKPENILI--TKHSVIKLCDFGFAR  150 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCCTTCE
T ss_pred             EEEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCCChhhEEE--cCCCCEEEeeCCCch
Confidence            99999999875 55554443  4589999999999999999999964  89999999999999  678899999999997


Q ss_pred             ecCCc---cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        265 HVGQT---LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       265 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   .....||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+.+..+.++.......
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (311)
T 4agu_A          151 LLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF  230 (311)
T ss_dssp             ECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             hccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence            76432   234578999999999986 57899999999999999999999999999999999999888877665443221


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      ... .++...                ..|...........           .    ......+.+||.+||++||.+|||
T Consensus       231 ~~~-~~~~~~----------------~~~~~~~~~~~~~~-----------~----~~~~~~~~~li~~~L~~dP~~Rpt  278 (311)
T 4agu_A          231 STN-QYFSGV----------------KIPDPEDMEPLELK-----------F----PNISYPALGLLKGCLHMDPTERLT  278 (311)
T ss_dssp             HTC-GGGTTC----------------CCCCCSSCCCHHHH-----------C----TTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred             ccc-cccccC----------------cCCCccccchhhhh-----------c----ccccHHHHHHHHHHccCChhhcCC
Confidence            111 111100                00000000000000           0    011125789999999999999999


Q ss_pred             HHHHhcCCCcCcCCC
Q psy11727        421 PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~  435 (437)
                      ++|+|+||||++...
T Consensus       279 ~~ell~hp~f~~~~~  293 (311)
T 4agu_A          279 CEQLLHHPYFENIRE  293 (311)
T ss_dssp             HHHHHTSGGGTTCC-
T ss_pred             HHHHhcChHHHhccC
Confidence            999999999998653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3.4e-48  Score=381.64  Aligned_cols=254  Identities=24%  Similarity=0.415  Sum_probs=207.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|+++.+++.||+|++.....    .......|..++..+.    .||||++++++|.+.+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTES   83 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC----CCCccCeEEEEEEeCC
Confidence            5789999999999999999999999999999999974322    2234556777776653    7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||+.| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NIll--~~~g~~kL~DFG~a  157 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER--GIIYRDLKLDNVLL--DSEGHIKLTDYGMC  157 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCGGGC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCHHHEEE--CCCCCEEEEecccc
Confidence            99999999965 8988887653  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHHHhCC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN---------EVDQMTKIIEVLGM  331 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~---------~~~~~~~i~~~~~~  331 (437)
                      ...   .......+||+.|+|||++.+..++.++|+|||||++|||++|++||....         .....+.+....-.
T Consensus       158 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (345)
T 3a8x_A          158 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR  237 (345)
T ss_dssp             BCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC
T ss_pred             ccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC
Confidence            753   334456789999999999999999999999999999999999999997521         22222222221000


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                                                          .|.                           .....+.+||.+||
T Consensus       238 ------------------------------------~p~---------------------------~~s~~~~~li~~lL  254 (345)
T 3a8x_A          238 ------------------------------------IPR---------------------------SLSVKAASVLKSFL  254 (345)
T ss_dssp             ------------------------------------CCT---------------------------TSCHHHHHHHHHHT
T ss_pred             ------------------------------------CCC---------------------------CCCHHHHHHHHHHh
Confidence                                                000                           00125789999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCcCcCCC
Q psy11727        412 TYDPKKRISP------TNVLRHEFFLKHSV  435 (437)
Q Consensus       412 ~~dP~~R~t~------~e~l~Hp~~~~~~~  435 (437)
                      +.||.+|||+      +|+++||||++..+
T Consensus       255 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          255 NKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             CSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             cCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence            9999999996      89999999988654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=4.8e-48  Score=387.40  Aligned_cols=285  Identities=34%  Similarity=0.567  Sum_probs=222.5

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ++....+|.+.+.||+|+||+||+|++..++. ||+|++.......   .+|+.+++.+     .||||++++++|...+
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~---~~E~~il~~l-----~h~niv~l~~~~~~~~  105 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK---NRELQIMRIV-----KHPNVVDLKAFFYSNG  105 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSC---CHHHHHHHTC-----CCTTBCCEEEEEEEES
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchH---HHHHHHHHhC-----CCCCcceEEEEEEecC
Confidence            45567789999999999999999999887766 8888776443322   3588888776     6899999999996543


Q ss_pred             ------EEEEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        185 ------HLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       185 ------~~~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                            ++++||||+++++.+.+..  .....+++..++.++.||+.||+|||++  ||+||||||+|||++ ..++.+|
T Consensus       106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~Nill~-~~~~~~k  182 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--GICHRDIKPQNLLLD-PPSGVLK  182 (394)
T ss_dssp             SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEE-TTTTEEE
T ss_pred             CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCCHHHEEEc-CCCCcEE
Confidence                  4899999999988776542  2235699999999999999999999964  899999999999994 2678899


Q ss_pred             EEeCCCceec--CCccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        257 IIDFGSSCHV--GQTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       257 L~DFG~s~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |+|||+|...  +......+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+++..+...+|.|+
T Consensus       183 L~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~  262 (394)
T 4e7w_A          183 LIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS  262 (394)
T ss_dssp             ECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             EeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            9999999765  3334567889999999999775 589999999999999999999999999999999999999999998


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ...+......  +...    .+.           ......+.....                 ......+.+||.+||++
T Consensus       263 ~~~~~~~~~~--~~~~----~~~-----------~~~~~~~~~~~~-----------------~~~~~~~~~li~~~L~~  308 (394)
T 4e7w_A          263 REQIKTMNPN--YMEH----KFP-----------QIRPHPFSKVFR-----------------PRTPPDAIDLISRLLEY  308 (394)
T ss_dssp             HHHHHHHCGG--GSSS----CCC-----------CCCCCCHHHHSC-----------------TTCCHHHHHHHHHHCCS
T ss_pred             HHHHHhhChh--hhhh----ccc-----------cccCCcHHHhcc-----------------ccCCHHHHHHHHHHhCC
Confidence            8766533211  1000    000           000000111100                 00112689999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||.+|||+.|+++||||++..+
T Consensus       309 dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          309 TPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             SGGGSCCHHHHHTSGGGSTTTS
T ss_pred             ChhhCCCHHHHhcChhhhhhcc
Confidence            9999999999999999997654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3.6e-48  Score=385.17  Aligned_cols=281  Identities=30%  Similarity=0.544  Sum_probs=224.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|.+.+.||+|+||+||+|.+..+|+.||||++.....   ....+.+|+.+++.+     .||||+++++++...
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~  113 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPA  113 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-----CCCCchhhhhheecc
Confidence            456899999999999999999999999999999999975322   234566777777776     689999999999877


Q ss_pred             CEE------EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 NHL------CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~~~------~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +..      |+||||++++|.+.+..    .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIll--~~~~~~kL  185 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAV--NEDCELKI  185 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEE
T ss_pred             CCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCcCHHHeEE--CCCCCEEE
Confidence            654      99999999998877632    389999999999999999999964  89999999999999  67888999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.|+..+
T Consensus       186 ~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  265 (371)
T 4exu_A          186 LDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF  265 (371)
T ss_dssp             CSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             EecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHH
Confidence            999999888777777889999999999987 6899999999999999999999999999999999999999999999888


Q ss_pred             hccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ........  .+...++..                ....+..+.                  ......+.+||.+||++|
T Consensus       266 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~------------------~~~~~~~~~li~~~L~~d  311 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLPQT----------------PRKDFTQLF------------------PRASPQAADLLEKMLELD  311 (371)
T ss_dssp             HTTCSCHHHHHHHHHSCCC----------------CCCCHHHHS------------------TTSCHHHHHHHHHHSCSC
T ss_pred             HHHhhhhhhhhhhhccCCC----------------cchhHHHhc------------------cccChHHHHHHHHHCCCC
Confidence            76554321  111111100                000000000                  001236899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |.+|||+.|+|+||||++..
T Consensus       312 P~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          312 VDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             TTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhcCCHHHHhcCcccccCC
Confidence            99999999999999998753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=6.6e-48  Score=382.12  Aligned_cols=280  Identities=30%  Similarity=0.538  Sum_probs=226.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK---  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~---  183 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....  .....+.+|+.++..+     .||||+++++++...   
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSSTT
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-----CCCCCccceeEEecCCcc
Confidence            468999999999999999999999999999999997432  2235566788888877     689999999998765   


Q ss_pred             --CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 --NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 --~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                        ...|+|||+++++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus       101 ~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~--~~~~~~kl~Dfg  173 (364)
T 3qyz_A          101 QMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLL--NTTCDLKICDFG  173 (364)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCCT
T ss_pred             ccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCChHhEEE--CCCCCEEEEeCc
Confidence              479999999999999998764   489999999999999999999964  89999999999999  678889999999


Q ss_pred             CceecCCc------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQT------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ++......      ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|+.
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  253 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            99866433      234588999999998765 45899999999999999999999999999999999999999999998


Q ss_pred             hhhccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        335 YLLHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       335 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ..+.......  .+....+.                +....+..+.                  ......+.+||.+||+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~------------------~~~~~~~~~li~~~L~  299 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPH----------------KNKVPWNRLF------------------PNADSKALDLLDKMLT  299 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCC----------------CCCCCHHHHC------------------TTSCHHHHHHHHHHTC
T ss_pred             HHHHHhhhhhHHHHHHhcCC----------------ccCCCHHHhC------------------CCCCHHHHHHHHHHcC
Confidence            8776543321  11111110                0000001100                  0011257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +||.+|||+.|+|+||||++..
T Consensus       300 ~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          300 FNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CChhhCCCHHHHhcCcchhhcc
Confidence            9999999999999999999853

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.4e-48  Score=391.69  Aligned_cols=281  Identities=31%  Similarity=0.527  Sum_probs=220.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-----  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-----  183 (437)
                      ..+|++.+.||+|+||.||+|++..+++.||||++......   ..+|+.+++.+     .|+|||+++++|...     
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~E~~il~~l-----~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHHTC-----CCTTBCCEEEEEEEEETTTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh---HHHHHHHHHHc-----CCCCccceeeEEeccCCCCc
Confidence            45799999999999999999999999999999999754322   33588888776     789999999998542     


Q ss_pred             -CEEEEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 -NHLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 -~~~~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       .++++||||+++++.+.+..  .....+++..++.++.||+.||+|||++  ||+||||||+|||++. +.+.+||+||
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~--~ivHrDlkp~NILl~~-~~~~~kl~DF  201 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLLDP-DTAVLKLCDF  201 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCSGGGEEEET-TTTEEEECCC
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChhhEEEeC-CCCeEEeccc
Confidence             25789999999988877653  2335699999999999999999999964  8999999999999942 3456899999


Q ss_pred             CCceecC--CccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        261 GSSCHVG--QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       261 G~s~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |++....  ......+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+++..+++.+|.|....+
T Consensus       202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            9998653  334457899999999999875 7999999999999999999999999999999999999999999987766


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      ......   +.     .+.+...         ....+..++.                 ......+.+||.+||++||.+
T Consensus       282 ~~~~~~---~~-----~~~~p~~---------~~~~~~~~~~-----------------~~~~~~~~~Li~~~L~~dP~~  327 (420)
T 1j1b_A          282 REMNPN---YT-----EFKFPQI---------KAHPWTKVFR-----------------PRTPPEAIALCSRLLEYTPTA  327 (420)
T ss_dssp             HHHCSC---CC-----CCCCCCC---------CCCCHHHHSC-----------------TTSCHHHHHHHHHHSCSSGGG
T ss_pred             HhhChh---hh-----hhccCcc---------CCCCHHHhcC-----------------CCCCHHHHHHHHHhccCChhH
Confidence            432211   00     0000000         0000000000                 001126799999999999999


Q ss_pred             CCCHHHHhcCCCcCcCC
Q psy11727        418 RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~  434 (437)
                      |||+.|+++||||++..
T Consensus       328 R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          328 RLTPLEACAHSFFDELR  344 (420)
T ss_dssp             SCCHHHHHTSGGGGGGG
T ss_pred             CCCHHHHhCCHhhcccc
Confidence            99999999999998754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.6e-48  Score=387.80  Aligned_cols=259  Identities=26%  Similarity=0.401  Sum_probs=209.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhh-hcCCCCCcEEEecceeeECCEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKIN-KADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~-~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ..++|++.+.||+|+||+||+|+++.+++.||||++........ ...+....+... ...+.||||++++++|.+.+.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            35789999999999999999999999999999999975432111 111111222221 3456899999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |+||||+.| +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++..
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~--~givHrDlkp~NIll--~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILL--DSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEE--CTTSCEEECCCCBCGG
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCHHHEEE--CCCCCEEEeeCccccc
Confidence            999999965 8988887653  58999999999999999999995  489999999999999  7788999999999975


Q ss_pred             c---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 V---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .   .......+||+.|+|||++.+..|+.++|+|||||++|||++|.+||.+.+..+.+..|....-..+.        
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~--------  260 (373)
T 2r5t_A          189 NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP--------  260 (373)
T ss_dssp             GBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS--------
T ss_pred             cccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--------
Confidence            3   23345678999999999999999999999999999999999999999999988888877652100000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH-
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP-  421 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~-  421 (437)
                                                                             .....+.+||.+||+.||.+||++ 
T Consensus       261 -------------------------------------------------------~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          261 -------------------------------------------------------NITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             -------------------------------------------------------SSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             -------------------------------------------------------CCCHHHHHHHHHHcccCHHhCCCCC
Confidence                                                                   000157899999999999999997 


Q ss_pred             ---HHHhcCCCcCcCCCC
Q psy11727        422 ---TNVLRHEFFLKHSVD  436 (437)
Q Consensus       422 ---~e~l~Hp~~~~~~~~  436 (437)
                         .++++||||+..+++
T Consensus       286 ~~~~~i~~h~~f~~~~w~  303 (373)
T 2r5t_A          286 DDFMEIKSHVFFSLINWD  303 (373)
T ss_dssp             TTHHHHHTSGGGTTCCHH
T ss_pred             CCHHHHhCCccccCCCHH
Confidence               699999999987653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3e-48  Score=382.87  Aligned_cols=259  Identities=27%  Similarity=0.381  Sum_probs=210.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++....      .....+.+|+.++..+     .||||+++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-----KHPHIVELLETY   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            45678999999999999999999999999999999986321      1245677899888877     689999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEE
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIK  256 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ik  256 (437)
                      .+.+.+|+||||+.| +|.+.+...  ....+++..++.++.||+.||+|||++  ||+||||||+|||++.+. .+.+|
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~ivHrDlkp~NIl~~~~~~~~~vk  173 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN--NIIHRDVKPHCVLLASKENSAPVK  173 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECSSSTTCCEE
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCChHHeEEecCCCCCcEE
Confidence            999999999999965 888877543  223489999999999999999999964  899999999999995432 34599


Q ss_pred             EEeCCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        257 IIDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       257 L~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.. .+....+.......+
T Consensus       174 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~  252 (351)
T 3c0i_A          174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMN  252 (351)
T ss_dssp             ECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCC
T ss_pred             EecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCC
Confidence            9999999876543   234679999999999999999999999999999999999999998854 344444444221111


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ...+.          .                                                 ....+.+||.+||+.
T Consensus       253 ~~~~~----------~-------------------------------------------------~s~~~~~li~~~L~~  273 (351)
T 3c0i_A          253 PRQWS----------H-------------------------------------------------ISESAKDLVRRMLML  273 (351)
T ss_dssp             HHHHT----------T-------------------------------------------------SCHHHHHHHHHHTCS
T ss_pred             ccccc----------c-------------------------------------------------CCHHHHHHHHHHCCC
Confidence            11100          0                                                 001578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCc
Q psy11727        414 DPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~  432 (437)
                      ||.+|||+.|+|+||||++
T Consensus       274 dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          274 DPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             STTTSCCHHHHHTSHHHHT
T ss_pred             ChhHCcCHHHHhcChhhcC
Confidence            9999999999999999976

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-49  Score=390.39  Aligned_cols=254  Identities=29%  Similarity=0.453  Sum_probs=207.5

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ....++|.+.+.||+|+||+||+|.+..+++.||||++...    ......+.+|+.+++.+     .||||+++++++.
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~   79 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-----RHPHIIKLYDVIT   79 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-----CCTTBCCEEEEEE
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-----CCCCCCeEEEEEE
Confidence            34568999999999999999999999999999999998632    12234667788877665     6899999999999


Q ss_pred             ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        182 WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       182 ~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      +.+.+++||||++|+|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        80 ~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~--givH~Dlkp~NIll--~~~~~~kl~DFG  153 (336)
T 3h4j_B           80 TPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH--KIVHRDLKPENLLL--DDNLNVKIADFG  153 (336)
T ss_dssp             CSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCSTTTEEE--CTTCCEEECCSS
T ss_pred             eCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEecCCchhhEEE--cCCCCEEEEEec
Confidence            999999999999889999887653  589999999999999999999964  89999999999999  778899999999


Q ss_pred             CceecCC--ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVGQ--TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ++.....  .....+||+.|+|||++.+..+ +.++|||||||++|+|++|++||.+......                 
T Consensus       154 ~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------------  216 (336)
T 3h4j_B          154 LSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------------  216 (336)
T ss_dssp             CTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------------
T ss_pred             cceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------------
Confidence            9976543  2345789999999999998876 6899999999999999999999976432111                 


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                              +..+..+.+           ..|.                           .....+.+||++||+.||.+|
T Consensus       217 --------~~~i~~~~~-----------~~p~---------------------------~~s~~~~~li~~~L~~dP~~R  250 (336)
T 3h4j_B          217 --------FKKVNSCVY-----------VMPD---------------------------FLSPGAQSLIRRMIVADPMQR  250 (336)
T ss_dssp             --------BCCCCSSCC-----------CCCT---------------------------TSCHHHHHHHHTTSCSSGGGS
T ss_pred             --------HHHHHcCCC-----------CCcc---------------------------cCCHHHHHHHHHHcCCChhHC
Confidence                    111110000           0000                           011257899999999999999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      ||++|+++||||+..
T Consensus       251 pt~~eil~hp~~~~~  265 (336)
T 3h4j_B          251 ITIQEIRRDPWFNVN  265 (336)
T ss_dssp             CCHHHHTTCHHHHTT
T ss_pred             cCHHHHHhChhhccC
Confidence            999999999999753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-48  Score=390.56  Aligned_cols=258  Identities=25%  Similarity=0.373  Sum_probs=214.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..++|++.+.||+|+||+||+|+++.+++.||||++.+.    ......+..|..++..+     .|+||++++++|++.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-----DRRWITQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-----CTTTBCCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEeeC
Confidence            357899999999999999999999999999999999642    12234466788877665     789999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +++|+||||++ |+|.+++.... ..+++..++.++.||+.||+|||+  .|||||||||+|||+  +.++++||+|||+
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~--~giiHrDLKp~NILl--d~~g~vkL~DFGl  208 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHR--LGYVHRDIKPDNILL--DRCGHIRLADFGS  208 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTSCEEECCCTT
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccCHHHeee--cCCCCEEEeechh
Confidence            99999999995 58999987653 358999999999999999999995  489999999999999  7788999999999


Q ss_pred             ceecCCc----cccccccccccChhhhc-------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh--
Q psy11727        263 SCHVGQT----LYQYIQSRYYRSPEVLL-------GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL--  329 (437)
Q Consensus       263 s~~~~~~----~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~--  329 (437)
                      +......    ....+||+.|+|||++.       +..|+.++|||||||++|||++|++||.+.+..+.+.+|+...  
T Consensus       209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  288 (412)
T 2vd5_A          209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH  288 (412)
T ss_dssp             CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence            9876432    23468999999999997       4578999999999999999999999999999888888876421  


Q ss_pred             -CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        330 -GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       330 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                       ..|..  .                                                           ......+++||+
T Consensus       289 ~~~p~~--~-----------------------------------------------------------~~~s~~~~dli~  307 (412)
T 2vd5_A          289 LSLPLV--D-----------------------------------------------------------EGVPEEARDFIQ  307 (412)
T ss_dssp             CCCC-----------------------------------------------------------------CCCHHHHHHHH
T ss_pred             cCCCcc--c-----------------------------------------------------------cCCCHHHHHHHH
Confidence             11100  0                                                           000015799999


Q ss_pred             HccccCCCCC---CCHHHHhcCCCcCcCCCCC
Q psy11727        409 RMLTYDPKKR---ISPTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       409 ~~L~~dP~~R---~t~~e~l~Hp~~~~~~~~~  437 (437)
                      +||. +|.+|   +|++|+++||||+..++++
T Consensus       308 ~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~  338 (412)
T 2vd5_A          308 RLLC-PPETRLGRGGAGDFRTHPFFFGLDWDG  338 (412)
T ss_dssp             TTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred             HHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            9999 99998   5999999999999987763

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-48  Score=381.36  Aligned_cols=282  Identities=32%  Similarity=0.539  Sum_probs=222.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++....      .....+.+|+.++..+     .||||++++++|.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFG   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-----CCCCCCeEEEEEe
Confidence            3578999999999999999999999999999999986422      1234567788888877     6899999999999


Q ss_pred             ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        182 WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       182 ~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      +.+..++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~--~~~~~~kl~Dfg  157 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH--WILHRDLKPNNLLL--DENGVLKLADFG  157 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTCCEEECCCG
T ss_pred             eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC--CEECCCCCHHHEEE--cCCCCEEEEecc
Confidence            999999999999999998887654 4689999999999999999999964  89999999999999  678899999999


Q ss_pred             CceecCCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        262 SSCHVGQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       262 ~s~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ++......   ....+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+.+..+.|+...+
T Consensus       158 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~  237 (346)
T 1ua2_A          158 LAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW  237 (346)
T ss_dssp             GGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhh
Confidence            99765432   3346789999999999764 5899999999999999999999999999999999999999998877655


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      +.......+...                ...|.. .+..+.                  ......+.+||.+||+.||.+
T Consensus       238 ~~~~~~~~~~~~----------------~~~~~~-~~~~~~------------------~~~~~~~~~li~~~L~~dP~~  282 (346)
T 1ua2_A          238 PDMCSLPDYVTF----------------KSFPGI-PLHHIF------------------SAAGDDLLDLIQGLFLFNPCA  282 (346)
T ss_dssp             SSTTSSTTCCCC----------------CCCCCC-CHHHHC------------------TTCCHHHHHHHHHHHCSSTTT
T ss_pred             hhhccCcccccc----------------cccCCC-ChHHhh------------------ccCCHHHHHHHHHHhccChhh
Confidence            443322111100                000000 000000                  011136899999999999999


Q ss_pred             CCCHHHHhcCCCcCcCC
Q psy11727        418 RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~  434 (437)
                      |||++|+|+||||++..
T Consensus       283 Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          283 RITATQALKMKYFSNRP  299 (346)
T ss_dssp             SCCHHHHHTSGGGTSSS
T ss_pred             CCCHHHHhcChhhhcCC
Confidence            99999999999998643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.6e-48  Score=392.20  Aligned_cols=296  Identities=28%  Similarity=0.495  Sum_probs=213.0

Q ss_pred             ceeccCeee-eceecccCceEEEEEEEc--CCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEI-DTLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i-~~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.+.|++ .++||+|+||+||+|.+.  .+++.||||++... .....+.+|+.+++.+     .||||++++++|..
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~   89 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSACREIALLREL-----KHPNVISLQKVFLS   89 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-SCCHHHHHHHHHHHHC-----CCTTBCCCCEEEEE
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-CCCHHHHHHHHHHHhc-----CCCCeeeEeeEEec
Confidence            445667887 458999999999999966  57889999999743 3445778899999887     68999999999965


Q ss_pred             --CCEEEEEEEeccCcHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--CC
Q psy11727        183 --KNHLCLVFELLSYNLYNLIRNTN-------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PK  251 (437)
Q Consensus       183 --~~~~~lV~E~~~~~L~~~l~~~~-------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--~~  251 (437)
                        ...+|+||||++++|.+++....       ...+++..++.++.||+.||+|||++  ||+||||||+|||+..  +.
T Consensus        90 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--~ivH~Dlkp~NIll~~~~~~  167 (405)
T 3rgf_A           90 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPE  167 (405)
T ss_dssp             TTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEECCSSTT
T ss_pred             CCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--CEeCCCcCHHHeEEecCCCC
Confidence              67999999999999998876321       12489999999999999999999964  8999999999999953  35


Q ss_pred             CCCEEEEeCCCceecCC------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCH------
Q psy11727        252 RSAIKIIDFGSSCHVGQ------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNE------  318 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~------  318 (437)
                      ++.+||+|||+|+....      .....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+.      
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  247 (405)
T 3rgf_A          168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN  247 (405)
T ss_dssp             TTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------C
T ss_pred             CCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccc
Confidence            67899999999976643      22346789999999999874 589999999999999999999999987665      


Q ss_pred             ---HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCC
Q psy11727        319 ---VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGH  395 (437)
Q Consensus       319 ---~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (437)
                         .+++..+...+|.|+...+........+.....+          .+....+... +...+....             
T Consensus       248 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~-------------  303 (405)
T 3rgf_A          248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKD----------FRRNTYTNCS-LIKYMEKHK-------------  303 (405)
T ss_dssp             CCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHH----------CCGGGGTTCC-HHHHHHTTT-------------
T ss_pred             cchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhh----------ccccCCCcch-hhhhHhhcC-------------
Confidence               4788999999999987665544322211110000          0000000000 001110000             


Q ss_pred             ChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       396 ~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                       ......+.+||.+||++||.+|||++|||+||||++..
T Consensus       304 -~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          304 -VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             -CCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             -CCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence             00112678999999999999999999999999998754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.5e-48  Score=383.66  Aligned_cols=259  Identities=27%  Similarity=0.392  Sum_probs=208.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ...+.++|++.+.||+|+||+||+|.++.+++.||||++.....   ....|+.++..+.    .||||++++++|.+.+
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~----~hp~iv~~~~~~~~~~   89 (342)
T 2qr7_A           17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYG----QHPNIITLKDVYDDGK   89 (342)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHT----TSTTBCCEEEEEECSS
T ss_pred             ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhc----CCCCcCeEEEEEEcCC
Confidence            34567899999999999999999999999999999999975432   3345777777663    6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC--CCEEEEeCC
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR--SAIKIIDFG  261 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~--~~ikL~DFG  261 (437)
                      .+|+||||+.| +|.+.+....  .+++..++.++.||+.||+|||++  ||+||||||+|||+..+..  +.+||+|||
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~--givHrDlkp~NIl~~~~~~~~~~~kl~Dfg  165 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ--GVVHRDLKPSNILYVDESGNPESIRICDFG  165 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence            99999999965 8999887653  589999999999999999999964  8999999999999853222  359999999


Q ss_pred             CceecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK---NEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++.....   ...+.+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.   +..+.+..+.......+..
T Consensus       166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  245 (342)
T 2qr7_A          166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG  245 (342)
T ss_dssp             TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST
T ss_pred             CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc
Confidence            9986532   234568899999999999888999999999999999999999999863   4444555543321110000


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                +                                                 +......+.+||.+||..||
T Consensus       246 ----------~-------------------------------------------------~~~~s~~~~~li~~~L~~dP  266 (342)
T 2qr7_A          246 ----------Y-------------------------------------------------WNSVSDTAKDLVSKMLHVDP  266 (342)
T ss_dssp             ----------T-------------------------------------------------TTTSCHHHHHHHHHHTCSST
T ss_pred             ----------c-------------------------------------------------cccCCHHHHHHHHHHCCCCh
Confidence                      0                                                 00011257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|||+.++++||||.++
T Consensus       267 ~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          267 HQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             TTSCCHHHHTTSHHHHTG
T ss_pred             hHCcCHHHHhcCCeecCc
Confidence            999999999999999764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=6.6e-48  Score=380.19  Aligned_cols=262  Identities=26%  Similarity=0.386  Sum_probs=200.3

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.+.++|++.+.||+|+||+||+|.+..+++.||||++.... ....+..|+.++..+     .||||++++++|...+
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~  121 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-----SHPNIIKLKEIFETPT  121 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-----CCCCCcceeeeEecCC
Confidence            3456788999999999999999999999999999999997432 345566788888877     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCC
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGS  262 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~  262 (437)
                      ..++||||+.+ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||++. +.++.+||+|||+
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~  197 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN--GIVHRDLKPENLLYATPAPDAPLKIADFGL  197 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred             eEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence            99999999965 8999887653  489999999999999999999964  8999999999999953 3478899999999


Q ss_pred             ceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhhcc
Q psy11727        263 SCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD-QMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       263 s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~p~~~~~~~  339 (437)
                      +......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..... .+..+.......+..+.  
T Consensus       198 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~--  275 (349)
T 2w4o_A          198 SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWW--  275 (349)
T ss_dssp             ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTT--
T ss_pred             ccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchh--
Confidence            9765432  235678999999999999999999999999999999999999998766544 34444321111100000  


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                               ......+.+||.+||+.||.+||
T Consensus       276 ---------------------------------------------------------~~~~~~~~~li~~~L~~dP~~Rp  298 (349)
T 2w4o_A          276 ---------------------------------------------------------DEVSLNAKDLVRKLIVLDPKKRL  298 (349)
T ss_dssp             ---------------------------------------------------------TTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             ---------------------------------------------------------hhCCHHHHHHHHHHccCChhhCc
Confidence                                                                     00112578999999999999999


Q ss_pred             CHHHHhcCCCcCcCCC
Q psy11727        420 SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~~  435 (437)
                      |+.|+|+||||++...
T Consensus       299 t~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          299 TTFQALQHPWVTGKAA  314 (349)
T ss_dssp             CHHHHHHSTTTTSTTC
T ss_pred             CHHHHhcCcccCCCcc
Confidence            9999999999988654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.3e-48  Score=384.07  Aligned_cols=258  Identities=30%  Similarity=0.389  Sum_probs=200.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|++..+++.||||++...........+|+.+++.+     .||||+++++++.+.+.+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-----RHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-----CCCCCCcEEEEEeeCCEEEE
Confidence            5789999999999999999999999999999999986666667788899888876     68999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec-
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV-  266 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~-  266 (437)
                      ||||+.+ +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||++.+..+.+||+|||++... 
T Consensus        94 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~--~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           94 IMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH--TTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             EEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            9999954 8999887653  58999999999999999999995  4899999999999995444456999999998743 


Q ss_pred             -CCccccccccccccChhhhcCCCCCCc-chHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChhhhccCCcc
Q psy11727        267 -GQTLYQYIQSRYYRSPEVLLGIPYDLA-IDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL-GMPPGYLLHGASKT  343 (437)
Q Consensus       267 -~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~p~~~~~~~~~~~  343 (437)
                       .......+||+.|+|||++.+..++.+ +|||||||++|+|++|++||.+.+.......+.... ....          
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----------  239 (361)
T 3uc3_A          170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY----------  239 (361)
T ss_dssp             -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC----------
T ss_pred             ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC----------
Confidence             233345689999999999998888765 899999999999999999998765433333222211 0000          


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                             ..|...                         .....+.+||.+||+.||.+|||+.|
T Consensus       240 -----------------------~~~~~~-------------------------~~s~~~~~li~~~L~~dP~~Rps~~e  271 (361)
T 3uc3_A          240 -----------------------SIPDDI-------------------------RISPECCHLISRIFVADPATRISIPE  271 (361)
T ss_dssp             -----------------------CCCTTS-------------------------CCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             -----------------------CCCCcC-------------------------CCCHHHHHHHHHHccCChhHCcCHHH
Confidence                                   000000                         00125789999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +++||||++.
T Consensus       272 ll~hp~f~~~  281 (361)
T 3uc3_A          272 IKTHSWFLKN  281 (361)
T ss_dssp             HHTSHHHHTT
T ss_pred             HHhCcchhcC
Confidence            9999999654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2e-47  Score=394.89  Aligned_cols=273  Identities=30%  Similarity=0.402  Sum_probs=222.1

Q ss_pred             CCCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--------------ccchHHHHHHH
Q psy11727         93 HDDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--------------PFLNQAQIEVQ  158 (437)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--------------~~~~~~~~e~~  158 (437)
                      ..-....+.......+.++|.+.+.||+|+||+||+|.+..+++.||+|++....              .....+.+|+.
T Consensus        19 ~~~~~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   98 (504)
T 3q5i_A           19 IAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS   98 (504)
T ss_dssp             CCCCGGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHH
T ss_pred             eeechhheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHH
Confidence            3334455666677778899999999999999999999999999999999997432              22345667888


Q ss_pred             HHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeee
Q psy11727        159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH  237 (437)
Q Consensus       159 ~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiH  237 (437)
                      ++..+     .||||++++++|.+.+++|+||||+++ +|.+.+....  .+++..++.++.||+.||+|||++  ||+|
T Consensus        99 ~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~ivH  169 (504)
T 3q5i_A           99 LLKSL-----DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH--NIVH  169 (504)
T ss_dssp             HHHTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT--TEEC
T ss_pred             HHHhC-----CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEe
Confidence            88776     789999999999999999999999965 8989887653  589999999999999999999964  8999


Q ss_pred             CCCCCCcEEEecCCC-CCEEEEeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        238 CDLKPENILLCSPKR-SAIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       238 rDiKp~NIll~~~~~-~~ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      |||||+|||++.+.. ..+||+|||++.....  .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.
T Consensus       170 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  248 (504)
T 3q5i_A          170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFG  248 (504)
T ss_dssp             SCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999953322 3699999999987643  3345689999999999875 69999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        315 GKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       315 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      +.+..+.+..+......++...+...                                                      
T Consensus       249 ~~~~~~~~~~i~~~~~~~~~~~~~~~------------------------------------------------------  274 (504)
T 3q5i_A          249 GQNDQDIIKKVEKGKYYFDFNDWKNI------------------------------------------------------  274 (504)
T ss_dssp             CSSHHHHHHHHHHCCCCCCHHHHTTS------------------------------------------------------
T ss_pred             CCCHHHHHHHHHcCCCCCCccccCCC------------------------------------------------------
Confidence            99988888887664322221111100                                                      


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                           ...+.+||.+||++||.+|||++|+|+||||++..
T Consensus       275 -----s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          275 -----SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             -----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             -----CHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence                 01579999999999999999999999999998754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.4e-47  Score=371.47  Aligned_cols=259  Identities=26%  Similarity=0.437  Sum_probs=217.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ....+..|+.++..+     .||||+++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~   82 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-----LHHNVITLHD   82 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-----CCCCcceEEE
Confidence            4457789999999999999999999999999999999975432       234577888888877     6899999999


Q ss_pred             eeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC----
Q psy11727        179 HFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS----  253 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~----  253 (437)
                      ++.+.+.+++||||++ ++|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++    
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~--~ivH~dikp~NIl~--~~~~~~~~  156 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK--KIAHFDLKPENIML--LDKNIPIP  156 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--SCTTSSSC
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCChHHEEE--ecCCCCcC
Confidence            9999999999999995 4899988764  3589999999999999999999964  89999999999999  4444    


Q ss_pred             CEEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  236 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD  236 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc
Confidence            7999999999876443  34567899999999999999999999999999999999999999998888777776543222


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      .+.......                                                           ...+.+||.+||
T Consensus       237 ~~~~~~~~~-----------------------------------------------------------~~~~~~li~~~l  257 (321)
T 2a2a_A          237 FDEEFFSHT-----------------------------------------------------------SELAKDFIRKLL  257 (321)
T ss_dssp             CCHHHHTTC-----------------------------------------------------------CHHHHHHHHTTS
T ss_pred             cChhhhccc-----------------------------------------------------------CHHHHHHHHHHc
Confidence            222111000                                                           015789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +.||.+|||++|+++||||+...
T Consensus       258 ~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          258 VKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             CCChhhCcCHHHHhcCccccCCC
Confidence            99999999999999999998754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.2e-47  Score=374.95  Aligned_cols=254  Identities=27%  Similarity=0.418  Sum_probs=206.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ..++|++.+.||+|+||+||+|++.   .+++.||+|+++...     ........|+.+++.+     .||||++++++
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~   89 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-----KHPFIVDLIYA   89 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-----CCTTBCCEEEE
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-----CCCCccceeEE
Confidence            3578999999999999999999985   689999999997532     1233456688888776     68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +...+.+|+||||+.+ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~--~ivH~Dlkp~Nill--~~~~~~kl~  163 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK--GIIYRDLKPENIML--NHQGHVKLT  163 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCTTTEEE--CTTSCEEEC
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC--CEEcccCCHHHeEE--CCCCcEEEE
Confidence            9999999999999965 8999887653  489999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        259 DFGSSCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       259 DFG~s~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.......|..
T Consensus       164 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~  243 (327)
T 3a62_A          164 DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPY  243 (327)
T ss_dssp             CCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             eCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCC
Confidence            999987542   22345679999999999999999999999999999999999999999998888777776531111100


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                     ....+.+||.+||+.||
T Consensus       244 ---------------------------------------------------------------~~~~~~~li~~~L~~dp  260 (327)
T 3a62_A          244 ---------------------------------------------------------------LTQEARDLLKKLLKRNA  260 (327)
T ss_dssp             ---------------------------------------------------------------SCHHHHHHHHHHSCSCG
T ss_pred             ---------------------------------------------------------------CCHHHHHHHHHHHhcCH
Confidence                                                                           01157899999999999


Q ss_pred             CCCC-----CHHHHhcCCCcCcCCC
Q psy11727        416 KKRI-----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~-----t~~e~l~Hp~~~~~~~  435 (437)
                      .+||     |+.|+++||||+...+
T Consensus       261 ~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          261 ASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             GGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             hhccCCCCCCHHHHHcCCcccCCCH
Confidence            9999     8999999999987653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=7e-47  Score=368.10  Aligned_cols=285  Identities=32%  Similarity=0.493  Sum_probs=228.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEc-CCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee--
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDH-EEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT--  181 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~-~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~--  181 (437)
                      ..++|++.+.||+|+||+||+|.+. .+++.||+|++....   .......+|+.+++.+..  +.||||+++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH--TCCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhc--cCCCCeEeeeeeeeec
Confidence            3578999999999999999999995 678999999986322   223466778888887754  37899999999987  


Q ss_pred             ---ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        182 ---WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       182 ---~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                         ....+++|||+++++|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--gi~H~dlkp~Nili--~~~~~~kl~  162 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILV--TSSGQIKLA  162 (326)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTCCEEEC
T ss_pred             ccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCCHHHeEE--cCCCCEEEe
Confidence               45689999999999999999877656699999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||++......  .....||..|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.|+...
T Consensus       163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  242 (326)
T 1blx_A          163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED  242 (326)
T ss_dssp             SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence            99999766432  3346789999999999999999999999999999999999999999999999999999988887655


Q ss_pred             hccCCccch-hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        337 LHGASKTSK-YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       337 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ++....... .+....                   ...+..+                  .......+.+||.+||+.||
T Consensus       243 ~~~~~~~~~~~~~~~~-------------------~~~~~~~------------------~~~~~~~~~~li~~~L~~dP  285 (326)
T 1blx_A          243 WPRDVALPRQAFHSKS-------------------AQPIEKF------------------VTDIDELGKDLLLKCLTFNP  285 (326)
T ss_dssp             SCTTCSSCGGGSCCCC-------------------CCCGGGT------------------CCSCCHHHHHHHHHHSCSST
T ss_pred             CccccccchhhhcccC-------------------cchhhhc------------------cccCCHHHHHHHHHHcCCCc
Confidence            433221100 000000                   0000000                  00011257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCCC
Q psy11727        416 KKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+|||+.|+++||||++...
T Consensus       286 ~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          286 AKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             TTSCCHHHHHTSGGGTTCCC
T ss_pred             ccCCCHHHHhcCccccccch
Confidence            99999999999999987643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.2e-47  Score=382.46  Aligned_cols=256  Identities=25%  Similarity=0.394  Sum_probs=209.3

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .|||||+++++|.
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~   85 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-----EHPFLVNLWYSFQ   85 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEE
Confidence            344688999999999999999999999999999999996422    2234566788877765     7899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      +.+.+|+||||+.| +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~--givHrDlkp~NIll--~~~g~vkL~DF  159 (384)
T 4fr4_A           86 DEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ--RIIHRDMKPDNILL--DEHGHVHITDF  159 (384)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--CceeccCcHHHeEE--CCCCCEEEecc
Confidence            99999999999965 888888764  3599999999999999999999964  89999999999999  77889999999


Q ss_pred             CCceecC--CccccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCC
Q psy11727        261 GSSCHVG--QTLYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNE---VDQMTKIIEVLGMP  332 (437)
Q Consensus       261 G~s~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~---~~~~~~i~~~~~~p  332 (437)
                      |++....  ......+||+.|+|||++.+   ..|+.++|||||||++|+|++|++||.+.+.   ......+.......
T Consensus       160 G~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  239 (384)
T 4fr4_A          160 NIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY  239 (384)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCC
T ss_pred             ceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCC
Confidence            9998764  33456789999999999974   4589999999999999999999999975433   22223222211000


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      |.                                                               .....+.+||.+||+
T Consensus       240 p~---------------------------------------------------------------~~s~~~~~li~~lL~  256 (384)
T 4fr4_A          240 PS---------------------------------------------------------------AWSQEMVSLLKKLLE  256 (384)
T ss_dssp             CT---------------------------------------------------------------TSCHHHHHHHHHHSC
T ss_pred             CC---------------------------------------------------------------cCCHHHHHHHHHHhc
Confidence            00                                                               001257899999999


Q ss_pred             cCCCCCCC-HHHHhcCCCcCcCCC
Q psy11727        413 YDPKKRIS-PTNVLRHEFFLKHSV  435 (437)
Q Consensus       413 ~dP~~R~t-~~e~l~Hp~~~~~~~  435 (437)
                      .||.+||| ++++++||||++.++
T Consensus       257 ~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          257 PNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             SSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             CCHhHhcccHHHHHcChhhhcCCH
Confidence            99999998 999999999998765

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.3e-47  Score=383.37  Aligned_cols=300  Identities=20%  Similarity=0.238  Sum_probs=210.0

Q ss_pred             ccCeeeeceeccc--CceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKG--SFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G--~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.+.||+|  +||+||+|++..+++.||||++....   .....+.+|+.+++.+     .|||||+++++|.+.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-----NHPNIVPYRATFIAD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCCCcEeEEEEEC
Confidence            4689999999999  99999999999999999999997442   2234556688888776     689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+|+||||+.+ +|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~NIll--~~~~~~kl~dfg~  174 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM--GYVHRSVKASHILI--SVDGKVYLSGLRS  174 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTCCEEECCGGG
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--cCCCCEEEccccc
Confidence            999999999964 899998876556799999999999999999999964  89999999999999  6788999999998


Q ss_pred             ceecC----------CccccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q psy11727        263 SCHVG----------QTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG  330 (437)
Q Consensus       263 s~~~~----------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  330 (437)
                      +....          ......+||+.|+|||++.+  ..++.++|||||||++|+|++|++||.+.+....+..+.... 
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-  253 (389)
T 3gni_B          175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT-  253 (389)
T ss_dssp             CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----
T ss_pred             ceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-
Confidence            85431          11223478999999999988  679999999999999999999999999877665555443321 


Q ss_pred             CCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       331 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                       .+. +..........+.......              .....+.+.+......|.................+.+||.+|
T Consensus       254 -~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  317 (389)
T 3gni_B          254 -VPC-LLDTSTIPAEELTMSPSRS--------------VANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC  317 (389)
T ss_dssp             --------------------------------------------------------------------CCHHHHHHHHHH
T ss_pred             -CCc-ccccccccccccccccccc--------------ccccccccccccCccccccCCCCCCccccccCHHHHHHHHHH
Confidence             110 0000000000000000000              000000000000000000000000011122234689999999


Q ss_pred             cccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        411 LTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |++||.+|||+.|+|+||||++..
T Consensus       318 L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          318 LQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             TCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             hhcCcccCCCHHHHhcCHHHHHHh
Confidence            999999999999999999998754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1e-47  Score=385.69  Aligned_cols=257  Identities=27%  Similarity=0.435  Sum_probs=199.2

Q ss_pred             eccCeeee-ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE----
Q psy11727        108 FLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW----  182 (437)
Q Consensus       108 ~~~~y~i~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~----  182 (437)
                      +.++|.+. +.||+|+||+||+|.+..+++.||||++...    ....+|+.++.++.    .|+||++++++|..    
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~----~hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEETT
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhc----CCCCcceEeEEEeecccC
Confidence            45678886 7899999999999999999999999999643    45667777765543    78999999999876    


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDF  260 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DF  260 (437)
                      .+++||||||+.| +|.+++.......+++..++.++.||+.||.|||+  .||+||||||+|||++.+. ++.+||+||
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCcCcceEEEecCCCCccEEEEec
Confidence            6689999999965 89999987655569999999999999999999996  4899999999999994322 688999999


Q ss_pred             CCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCh
Q psy11727        261 GSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVD----QMTKIIEVLGMPPG  334 (437)
Q Consensus       261 G~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~----~~~~i~~~~~~p~~  334 (437)
                      |++.....  .....+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+...    ....+.......+.
T Consensus       209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~  288 (400)
T 1nxk_A          209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN  288 (400)
T ss_dssp             TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT
T ss_pred             ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCC
Confidence            99987643  2346788999999999999999999999999999999999999998765321    22222211000000


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                        +.+                         ......+.+||.+||+.|
T Consensus       289 ----------------------------------~~~-------------------------~~~s~~~~~li~~~L~~d  309 (400)
T 1nxk_A          289 ----------------------------------PEW-------------------------SEVSEEVKMLIRNLLKTE  309 (400)
T ss_dssp             ----------------------------------TTT-------------------------TTSCHHHHHHHHTTSCSS
T ss_pred             ----------------------------------ccc-------------------------ccCCHHHHHHHHHHCCCC
Confidence                                              000                         001125799999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||+.|+++||||.+.
T Consensus       310 P~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          310 PTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             GGGSCCHHHHHHSHHHHTT
T ss_pred             hhHCcCHHHHhcCccccCC
Confidence            9999999999999999764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.5e-47  Score=363.03  Aligned_cols=261  Identities=30%  Similarity=0.413  Sum_probs=215.5

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++.....   ....+..|+.+++.+     .||||+++++++..
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   76 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQE   76 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEEEEc
Confidence            3467899999999999999999999999999999999974432   224456788887776     68999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDF  260 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DF  260 (437)
                      .+..++||||+.+ +|.+.+....  .+++..+..++.||+.||.|||+  .||+||||||+||+++.+. .+.+||+||
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~Nil~~~~~~~~~~kl~Df  152 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADF  152 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCCGGGEEESSSSTTCCEEECCC
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--CCcCcCCCCHHHEEEecCCCCCcEEEeec
Confidence            9999999999965 8888887653  48999999999999999999996  4899999999999995332 245999999


Q ss_pred             CCceecCCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |++.......  ....||+.|+|||++.+..++.++||||||+++|+|++|.+||.+.+.......+.......+.....
T Consensus       153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T 3kk8_A          153 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD  232 (284)
T ss_dssp             TTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTT
T ss_pred             eeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhc
Confidence            9997765432  34678999999999999999999999999999999999999999988887777765532221110000


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                 .....+.+||.+||+.||.+|
T Consensus       233 -----------------------------------------------------------~~~~~~~~li~~~l~~dp~~R  253 (284)
T 3kk8_A          233 -----------------------------------------------------------TVTPEAKSLIDSMLTVNPKKR  253 (284)
T ss_dssp             -----------------------------------------------------------TSCHHHHHHHHHHSCSSTTTS
T ss_pred             -----------------------------------------------------------ccCHHHHHHHHHHcccChhhC
Confidence                                                                       001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCC
Q psy11727        419 ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~  434 (437)
                      ||+.|+|+||||++..
T Consensus       254 ps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          254 ITADQALKVPWICNRE  269 (284)
T ss_dssp             CCHHHHTTSHHHHSCC
T ss_pred             CCHHHHhcCccccCCh
Confidence            9999999999998753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=9.1e-48  Score=375.17  Aligned_cols=255  Identities=25%  Similarity=0.390  Sum_probs=205.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++.....  ....+..|+.++..+     .||||+++++++.+.+
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~   78 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGN   78 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCC
Confidence            357899999999999999999999999999999999964432  234567788888776     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..|+||||+++ +|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||++
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~--~givH~Dlkp~NIll--~~~~~~kl~Dfg~a  152 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG--IGITHRDIKPENLLL--DERDNLKISDFGLA  152 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEE--CTTCCEEECCCTTC
T ss_pred             eEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCccccccchHHEEE--eCCCCEEEEEeecc
Confidence            99999999966 888887654  358999999999999999999995  489999999999999  67889999999999


Q ss_pred             eecCC-----ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhh
Q psy11727        264 CHVGQ-----TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQ-MTKIIEVLGMPPGYL  336 (437)
Q Consensus       264 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~p~~~~  336 (437)
                      .....     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|++||.+.+.... ...+......++.  
T Consensus       153 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~--  230 (323)
T 3tki_A          153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--  230 (323)
T ss_dssp             EECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT--
T ss_pred             ceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc--
Confidence            75421     1235679999999999988775 7789999999999999999999987654322 2221111000000  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                +                                                 ......+.+||.+||+.||.
T Consensus       231 ----------~-------------------------------------------------~~~~~~~~~li~~~L~~dP~  251 (323)
T 3tki_A          231 ----------W-------------------------------------------------KKIDSAPLALLHKILVENPS  251 (323)
T ss_dssp             ----------G-------------------------------------------------GGSCHHHHHHHHHHSCSSTT
T ss_pred             ----------c-------------------------------------------------ccCCHHHHHHHHHHccCChh
Confidence                      0                                                 00012578999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||++|+++||||++.
T Consensus       252 ~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          252 ARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             TSCCHHHHTTCTTTTCC
T ss_pred             hCcCHHHHhhChhhccc
Confidence            99999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=7.2e-48  Score=383.33  Aligned_cols=258  Identities=27%  Similarity=0.399  Sum_probs=208.4

Q ss_pred             ccCeee--eceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEI--DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i--~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+.|.+  .+.||+|+||+||+|.+..+|+.||+|+++... .....+.+|+.++..+     .||||+++++++.+.+.
T Consensus        86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~  160 (373)
T 2x4f_A           86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-----DHANLIQLYDAFESKND  160 (373)
T ss_dssp             GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCE
Confidence            445655  678999999999999999999999999997543 2234566677777665     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+..+..+.+||+|||++.
T Consensus       161 ~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~  237 (373)
T 2x4f_A          161 IVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM--YILHLDLKPENILCVNRDAKQIKIIDFGLAR  237 (373)
T ss_dssp             EEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEETTTTEEEECCCSSCE
T ss_pred             EEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CcccccCCHHHEEEecCCCCcEEEEeCCCce
Confidence            9999999965 8888886543 3589999999999999999999964  8999999999999976677889999999998


Q ss_pred             ecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        265 HVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       265 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .....  ....+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+......++.....    
T Consensus       238 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~----  313 (373)
T 2x4f_A          238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQ----  313 (373)
T ss_dssp             ECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGT----
T ss_pred             ecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhc----
Confidence            76432  334579999999999999899999999999999999999999999999888888776542211110000    


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                            .                                                 ....+.+||.+||+.||.+|||+.
T Consensus       314 ------~-------------------------------------------------~~~~~~~li~~~L~~dp~~Rps~~  338 (373)
T 2x4f_A          314 ------D-------------------------------------------------ISEEAKEFISKLLIKEKSWRISAS  338 (373)
T ss_dssp             ------T-------------------------------------------------SCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             ------c-------------------------------------------------CCHHHHHHHHHHcCCChhhCCCHH
Confidence                  0                                                 012579999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      |+|+||||++.
T Consensus       339 e~l~hp~~~~~  349 (373)
T 2x4f_A          339 EALKHPWLSDH  349 (373)
T ss_dssp             HHHHSHHHHCH
T ss_pred             HHhcCcCcCCC
Confidence            99999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.4e-47  Score=369.98  Aligned_cols=263  Identities=30%  Similarity=0.404  Sum_probs=200.6

Q ss_pred             eeccCeeee-ceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|.+. +.||+|+||+||+|.+..+++.||||++.... .....+.+|+.++..+.    .||||+++++++.+.+
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~----~h~~i~~~~~~~~~~~   84 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ----GHRNVLELIEFFEEED   84 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC----CCTTBCCEEEEEEETT
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc----CCCCeeeEEEEEeeCC
Confidence            456789995 78999999999999999999999999997543 22456777888887652    7899999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEEEEeCCC
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFGS  262 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ikL~DFG~  262 (437)
                      .+++||||+. ++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||++.+.. ..+||+|||+
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A           85 RFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK--GIAHRDLKPENILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred             EEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC--CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence            9999999996 58999987753  589999999999999999999964  8999999999999943221 2499999999


Q ss_pred             ceecCC----------ccccccccccccChhhhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH--------
Q psy11727        263 SCHVGQ----------TLYQYIQSRYYRSPEVLLG-----IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV--------  319 (437)
Q Consensus       263 s~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~pf~~~~~~--------  319 (437)
                      +.....          .....+||+.|+|||++.+     ..++.++|||||||++|+|++|++||.+.+..        
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  240 (316)
T 2ac3_A          161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE  240 (316)
T ss_dssp             CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred             ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence            865421          1224568999999999975     45889999999999999999999999876421        


Q ss_pred             -------HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        320 -------DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       320 -------~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                             .....+.......|...+.                                                      
T Consensus       241 ~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------------------------------  266 (316)
T 2ac3_A          241 ACPACQNMLFESIQEGKYEFPDKDWA------------------------------------------------------  266 (316)
T ss_dssp             CCHHHHHHHHHHHHHCCCCCCHHHHT------------------------------------------------------
T ss_pred             cchhHHHHHHHHHhccCcccCchhcc------------------------------------------------------
Confidence                   1222222211111100000                                                      


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCCC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                           .....+.+||.+||+.||.+|||+.|+|+||||++...+
T Consensus       267 -----~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          267 -----HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE  305 (316)
T ss_dssp             -----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-----
T ss_pred             -----cCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCc
Confidence                 001257899999999999999999999999999986544

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.1e-47  Score=391.04  Aligned_cols=256  Identities=27%  Similarity=0.400  Sum_probs=207.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++....    ........|+.++     ..+.||||++++++|..
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l-----~~l~h~~iv~l~~~~~~  219 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL-----QNSRHPFLTALKYSFQT  219 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CC-----CCCSCTTSCCEEEEEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHH-----HhCCCCeEeeEEEEEee
Confidence            34678999999999999999999999999999999997321    1112223333333     44589999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+|+||||+++ +|.+++....  .+++..++.++.||+.||+|||+. .|||||||||+|||+  +.++.+||+|||
T Consensus       220 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-~giiHrDlkp~NIll--~~~~~~kl~DFG  294 (446)
T 4ejn_A          220 HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLML--DKDGHIKITDFG  294 (446)
T ss_dssp             TTEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCCGGGEEE--CSSSCEEECCCC
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhc-CCEEECCCCHHHEEE--CCCCCEEEccCC
Confidence            9999999999965 8888887653  589999999999999999999961 489999999999999  678899999999


Q ss_pred             CceecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +|....   ......+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+.......+.......|..   
T Consensus       295 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~---  371 (446)
T 4ejn_A          295 LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT---  371 (446)
T ss_dssp             CCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT---
T ss_pred             CceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCcc---
Confidence            997532   23445789999999999999999999999999999999999999999988877777765421111100   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                  ....+.+||.+||+.||.+|
T Consensus       372 ------------------------------------------------------------~~~~~~~li~~~L~~dP~~R  391 (446)
T 4ejn_A          372 ------------------------------------------------------------LGPEAKSLLSGLLKKDPKQR  391 (446)
T ss_dssp             ------------------------------------------------------------SCHHHHHHHHHHTCSSTTTS
T ss_pred             ------------------------------------------------------------CCHHHHHHHHHHcccCHHHh
Confidence                                                                        01257899999999999999


Q ss_pred             C-----CHHHHhcCCCcCcCCC
Q psy11727        419 I-----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~-----t~~e~l~Hp~~~~~~~  435 (437)
                      |     |++|+++||||++..+
T Consensus       392 ~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          392 LGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             TTCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCCCCCHHHHHhCccccCCCH
Confidence            9     9999999999998653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.8e-48  Score=375.96  Aligned_cols=258  Identities=30%  Similarity=0.413  Sum_probs=189.3

Q ss_pred             eeccCeeee---ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEID---TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~---~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .|.++|++.   +.||+|+||+||+|.+..+++.||||++...  .......|+.+++.+.    .||||+++++++.+.
T Consensus         5 ~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~----~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE----GHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             HHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT----TCTTBCCEEEEEECS
T ss_pred             cchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc----CCCCeeEEEEEEEcC
Confidence            345678885   7899999999999999999999999999643  3356677888888774    589999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDFG  261 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DFG  261 (437)
                      ++.|+||||+.+ +|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||++.++ ...+||+|||
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg  154 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV--GVVHRDLKPENLLFTDENDNLEIKIIDFG  154 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred             CEEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence            999999999965 899988775  3599999999999999999999964  899999999999995432 2379999999


Q ss_pred             CceecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCC
Q psy11727        262 SSCHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-------DQMTKIIEVLGM  331 (437)
Q Consensus       262 ~s~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~  331 (437)
                      ++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..       +.+..+......
T Consensus       155 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~  234 (325)
T 3kn6_A          155 FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS  234 (325)
T ss_dssp             TCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC
T ss_pred             cceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC
Confidence            9976533   234567899999999999999999999999999999999999999875432       223322211110


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++...+                                                           ......+.+||.+||
T Consensus       235 ~~~~~~-----------------------------------------------------------~~~s~~~~~li~~~L  255 (325)
T 3kn6_A          235 FEGEAW-----------------------------------------------------------KNVSQEAKDLIQGLL  255 (325)
T ss_dssp             CCSHHH-----------------------------------------------------------HTSCHHHHHHHHHHH
T ss_pred             CCcccc-----------------------------------------------------------cCCCHHHHHHHHHHC
Confidence            000000                                                           001126789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +.||.+|||++|+++||||++.
T Consensus       256 ~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          256 TVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CCCTTTCCCTTTSTTCGGGCTT
T ss_pred             CCChhHCCCHHHHhcChhhccC
Confidence            9999999999999999999875

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.2e-47  Score=376.61  Aligned_cols=281  Identities=29%  Similarity=0.530  Sum_probs=222.4

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|.+.+.||+|+||+||+|.+..+|+.||||++.....   ....+.+|+.++..+     .||||+++++++...
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   95 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPA   95 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCcccHhheEecc
Confidence            346789999999999999999999999999999999964321   234556677777766     689999999999876


Q ss_pred             CE------EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 NH------LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~~------~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +.      +|+||||++++|.+++..    .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~--~ivH~dlkp~NIl~--~~~~~~kl  167 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA--GVVHRDLKPGNLAV--NEDCELKI  167 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEE--CTTCCEEE
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEeE--CCCCcEEE
Confidence            53      599999999888876632    489999999999999999999964  89999999999999  67889999


Q ss_pred             EeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        258 IDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       258 ~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +|||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.|+..+
T Consensus       168 ~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  247 (353)
T 3coi_A          168 LDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF  247 (353)
T ss_dssp             CSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHH
T ss_pred             eecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999999887766667789999999999987 6789999999999999999999999999999999999999999999887


Q ss_pred             hccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        337 LHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       337 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      ........  .++..++..                                  .+.............+.+||.+||+.|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (353)
T 3coi_A          248 VQKLNDKAAKSYIQSLPQT----------------------------------PRKDFTQLFPRASPQAADLLEKMLELD  293 (353)
T ss_dssp             HTTCSCHHHHHHHHTSCBC----------------------------------SSCCTTTTCTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHhhHHHHHHHHhCcCC----------------------------------CCccHHHhcCCcCHHHHHHHHHHcCCC
Confidence            76544321  111111100                                  000000000111236899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcCC
Q psy11727        415 PKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~~  434 (437)
                      |.+|||+.|+|+||||+...
T Consensus       294 p~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          294 VDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             TTTSCCHHHHHTSGGGTTTC
T ss_pred             cccCCCHHHHhcCcchhhcc
Confidence            99999999999999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.3e-48  Score=377.82  Aligned_cols=263  Identities=26%  Similarity=0.395  Sum_probs=211.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC------cccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK------KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~------~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|++...      ......+..|+.++..+     .||||+++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-----HHPNIARLYEVY   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-----CCCCcceeehhh
Confidence            4568899999999999999999999999999999998642      22335677788888887     689999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHHH
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTN--------------------------------------FHGVSLNLTKKFAQQL  221 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~--------------------------------------~~~ls~~~~~~i~~qi  221 (437)
                      .+.+..++||||+++ +|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            999999999999954 8888874210                                      1124678889999999


Q ss_pred             HHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC-------ccccccccccccChhhhcC--CCCCC
Q psy11727        222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-------TLYQYIQSRYYRSPEVLLG--IPYDL  292 (437)
Q Consensus       222 ~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~-------~~~~~~gt~~y~aPE~~~~--~~~~~  292 (437)
                      +.||+|||++  ||+||||||+|||++.+..+.+||+|||++.....       ......||+.|+|||++.+  ..++.
T Consensus       178 ~~~l~~LH~~--~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          178 FSALHYLHNQ--GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHHHT--TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHHHC--CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence            9999999964  89999999999999554445899999999976532       1235678999999999975  67899


Q ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCC
Q psy11727        293 AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSK  372 (437)
Q Consensus       293 ~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (437)
                      ++|||||||++|+|++|++||.+.+..+....+......++.....                                  
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------  301 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYN----------------------------------  301 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGG----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccc----------------------------------
Confidence            9999999999999999999999998888877776532211110000                                  


Q ss_pred             chhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        373 RLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                                               .....+.+||.+||+.||.+|||+.|+|+||||++..+
T Consensus       302 -------------------------~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          302 -------------------------VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             -------------------------GSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             -------------------------cCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence                                     00125789999999999999999999999999998765

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.7e-47  Score=407.59  Aligned_cols=255  Identities=26%  Similarity=0.398  Sum_probs=215.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++...    ........|..++..+.    .|++|++++++|++.+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT----CCTTBCCEEEECBCSS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc----CCCeEEEEEEEEEeCC
Confidence            578999999999999999999999999999999997421    22334455665555443    7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+||||||+.| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+||||  +.++.+||+|||+|
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--gIiHrDLKp~NILl--~~~g~ikL~DFGla  489 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK--GIIYRDLKLDNVML--DSEGHIKIADFGMC  489 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--SEECCCCCSTTEEE--CSSSCEEECCCTTC
T ss_pred             EEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CeEeccCChhhEEE--cCCCcEEEeeccee
Confidence            99999999965 8999888753  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eec---CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHV---GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...   +....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..++++.|.......|..     
T Consensus       490 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~-----  564 (674)
T 3pfq_A          490 KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-----  564 (674)
T ss_dssp             EECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTT-----
T ss_pred             eccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCcc-----
Confidence            763   233456789999999999999999999999999999999999999999999988888886522111100     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                ....+.+||++||+.||.+||+
T Consensus       565 ----------------------------------------------------------~s~~~~~li~~lL~~dP~~R~~  586 (674)
T 3pfq_A          565 ----------------------------------------------------------MSKEAVAICKGLMTKHPGKRLG  586 (674)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHSCSSSTTCTT
T ss_pred             ----------------------------------------------------------CCHHHHHHHHHHccCCHHHCCC
Confidence                                                                      0115789999999999999999


Q ss_pred             H-----HHHhcCCCcCcCCCC
Q psy11727        421 P-----TNVLRHEFFLKHSVD  436 (437)
Q Consensus       421 ~-----~e~l~Hp~~~~~~~~  436 (437)
                      +     +|+++||||+..+++
T Consensus       587 ~~~~~~~ei~~h~ff~~i~w~  607 (674)
T 3pfq_A          587 CGPEGERDIKEHAFFRYIDWE  607 (674)
T ss_dssp             CSTTHHHHHHSSGGGSSCCHH
T ss_pred             CCCCcHHHHhcCccccCCCHH
Confidence            7     999999999987653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-47  Score=368.85  Aligned_cols=252  Identities=28%  Similarity=0.423  Sum_probs=202.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------------------------cchHHHHHHHHH
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------------------------FLNQAQIEVQLL  160 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------------------------~~~~~~~e~~~~  160 (437)
                      ..++|++.+.||+|+||+||+|.+..+++.||||++.....                           ....+..|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            36789999999999999999999999999999999974421                           124566788888


Q ss_pred             HHhhhcCCCCCcEEEecceeeE--CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeee
Q psy11727        161 EKINKADIHSRYIVKLKGHFTW--KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH  237 (437)
Q Consensus       161 ~~l~~~~~~h~~iv~l~~~~~~--~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiH  237 (437)
                      +.+     .||||+++++++.+  .+++++||||+++ +|.+++.   ...+++..++.++.||+.||+|||++  ||+|
T Consensus        91 ~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH  160 (298)
T 2zv2_A           91 KKL-----DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ--KIIH  160 (298)
T ss_dssp             HTC-----CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT--TEEC
T ss_pred             HhC-----CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC--Ceec
Confidence            776     68999999999987  5799999999965 6665432   24589999999999999999999964  8999


Q ss_pred             CCCCCCcEEEecCCCCCEEEEeCCCceecCCc---cccccccccccChhhhcCCC---CCCcchHHHHHHHHHHHHhCCC
Q psy11727        238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGIP---YDLAIDMWSLGCILVELHTGEP  311 (437)
Q Consensus       238 rDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~  311 (437)
                      |||||+|||+  +.++.+||+|||++......   .....||+.|+|||++.+..   ++.++|||||||++|+|++|++
T Consensus       161 ~Dlkp~Nil~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  238 (298)
T 2zv2_A          161 RDIKPSNLLV--GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC  238 (298)
T ss_dssp             CCCCGGGEEE--CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCHHHEEE--CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence            9999999999  67889999999999876432   23567899999999998765   3778999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCC
Q psy11727        312 LFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRN  391 (437)
Q Consensus       312 pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (437)
                      ||.+.+.......+.......+.                                    ..                   
T Consensus       239 pf~~~~~~~~~~~~~~~~~~~~~------------------------------------~~-------------------  263 (298)
T 2zv2_A          239 PFMDERIMCLHSKIKSQALEFPD------------------------------------QP-------------------  263 (298)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCCCS------------------------------------SS-------------------
T ss_pred             CCCCccHHHHHHHHhcccCCCCC------------------------------------cc-------------------
Confidence            99988776655554331110000                                    00                   


Q ss_pred             CCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        392 EPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       392 ~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                            .....+.+||.+||+.||.+|||+.|+++||||++
T Consensus       264 ------~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          264 ------DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             ------CCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             ------ccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                  00125789999999999999999999999999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=5.5e-47  Score=360.55  Aligned_cols=258  Identities=28%  Similarity=0.432  Sum_probs=216.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+.++|.+.+.||+|+||+||+|.+..++..||+|++.... .....+..|+.+++.+     .||||+++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-----DHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCe
Confidence            45678999999999999999999999999999999987432 2345677788888776     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCCc
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSS  263 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~s  263 (437)
                      .++||||+++ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+.. +.++.+||+|||++
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~  156 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL--NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA  156 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence            9999999965 8988887653  489999999999999999999964  8999999999999943 34678999999999


Q ss_pred             eecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        264 CHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       264 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .....  ......||+.|+|||++.+. ++.++||||||+++|+|++|.+||.+.+..+....+......++....... 
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  234 (277)
T 3f3z_A          157 ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV-  234 (277)
T ss_dssp             EECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTS-
T ss_pred             eeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcC-
Confidence            76543  33456789999999998764 899999999999999999999999999888887777664433333221110 


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                                ...+.+||.+||+.||.+|||+
T Consensus       235 ----------------------------------------------------------~~~~~~li~~~l~~dp~~R~s~  256 (277)
T 3f3z_A          235 ----------------------------------------------------------SPQAESLIRRLLTKSPKQRITS  256 (277)
T ss_dssp             ----------------------------------------------------------CHHHHHHHHHHTCSSTTTSCCH
T ss_pred             ----------------------------------------------------------CHHHHHHHHHHccCChhhCcCH
Confidence                                                                      0157899999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      .++|+||||++.
T Consensus       257 ~~~l~h~~~~~~  268 (277)
T 3f3z_A          257 LQALEHEWFEKQ  268 (277)
T ss_dssp             HHHTTSHHHHHH
T ss_pred             HHHhcCHHHhcc
Confidence            999999999763

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=9.7e-48  Score=395.21  Aligned_cols=265  Identities=35%  Similarity=0.483  Sum_probs=218.2

Q ss_pred             eeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       101 ~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      +...+..+.++|++.+.||+|+||+||+|.+..+++.||||++....    .....+.+|+.++..+     .||||+++
T Consensus        17 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~   91 (484)
T 3nyv_A           17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-----DHPNIMKL   91 (484)
T ss_dssp             --CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-----CCTTBCCE
T ss_pred             eccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-----CCCCCCcE
Confidence            33445667889999999999999999999999999999999996432    2234566788877665     78999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCC
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~  254 (437)
                      +++|.+.+.+++||||+.+ +|.+.+....  .+++..++.++.||+.||+|||++  ||+||||||+|||+.. +.++.
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~  167 (484)
T 3nyv_A           92 YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN--KIVHRDLKPENLLLESKSKDAN  167 (484)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESSSSTTCC
T ss_pred             EEEEEeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeeCCCCHHHEEEecCCCCCc
Confidence            9999999999999999954 8999887653  589999999999999999999964  8999999999999953 24678


Q ss_pred             EEEEeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        255 IKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       255 ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      +||+|||++.....  .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......+
T Consensus       168 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  246 (484)
T 3nyv_A          168 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF  246 (484)
T ss_dssp             EEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             EEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            99999999976543  3345689999999999987 69999999999999999999999999999888888776532211


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +...+.                                                           .....+.+||.+||+
T Consensus       247 ~~~~~~-----------------------------------------------------------~~s~~~~~li~~~L~  267 (484)
T 3nyv_A          247 ELPQWK-----------------------------------------------------------KVSESAKDLIRKMLT  267 (484)
T ss_dssp             CSGGGG-----------------------------------------------------------GSCHHHHHHHHHHTC
T ss_pred             CCcccc-----------------------------------------------------------cCCHHHHHHHHHHCC
Confidence            100000                                                           001257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +||.+|||+.|+|+||||++..
T Consensus       268 ~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          268 YVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             SSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CChhHCcCHHHHhhChhhcccc
Confidence            9999999999999999998644

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.4e-47  Score=392.20  Aligned_cols=265  Identities=30%  Similarity=0.427  Sum_probs=215.1

Q ss_pred             cceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEE
Q psy11727         99 DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVK  175 (437)
Q Consensus        99 ~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~  175 (437)
                      .++......+.++|++.+.||+|+||+||+|.+..++..||+|++....   .....+.+|+.++..+     .|||||+
T Consensus        26 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~  100 (494)
T 3lij_A           26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-----DHPNIMK  100 (494)
T ss_dssp             GGCCCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-----CCTTBCC
T ss_pred             heeecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-----CCCCCCe
Confidence            4455555667889999999999999999999999999999999997532   2245566788877665     7899999


Q ss_pred             ecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCC
Q psy11727        176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRS  253 (437)
Q Consensus       176 l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~  253 (437)
                      ++++|.+.+.+|+||||+.+ +|.+.+....  .+++..++.++.||+.||+|||++  ||+||||||+|||++.. ..+
T Consensus       101 ~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~Nil~~~~~~~~  176 (494)
T 3lij_A          101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH--NIVHRDLKPENLLLESKEKDA  176 (494)
T ss_dssp             EEEEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSTTC
T ss_pred             EEEEEEeCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CceeccCChhhEEEeCCCCCC
Confidence            99999999999999999965 8988887653  589999999999999999999964  89999999999999542 245


Q ss_pred             CEEEEeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||+|.....  .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus       177 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  255 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT  255 (494)
T ss_dssp             CEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             cEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            699999999976643  3345689999999999864 6999999999999999999999999999988888877664322


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++...+..                                                           ....+.+||.+||
T Consensus       256 ~~~~~~~~-----------------------------------------------------------~s~~~~~li~~~L  276 (494)
T 3lij_A          256 FDSPEWKN-----------------------------------------------------------VSEGAKDLIKQML  276 (494)
T ss_dssp             CCSGGGTT-----------------------------------------------------------SCHHHHHHHHHHT
T ss_pred             CCchhccc-----------------------------------------------------------CCHHHHHHHHHHC
Confidence            21111100                                                           0015789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCc
Q psy11727        412 TYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      ++||.+|||+.|+|+||||++
T Consensus       277 ~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          277 QFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             CSSTTTSCCHHHHHTCHHHHH
T ss_pred             CCChhhCccHHHHhcCccccc
Confidence            999999999999999999975

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=9.9e-47  Score=371.30  Aligned_cols=284  Identities=28%  Similarity=0.483  Sum_probs=221.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+|+.||||++....  .....+.+|+.++..+     .||||+++++++...
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIITIFNIQRPD   81 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCS
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-----cCCCcCCeeeeeccc
Confidence            345789999999999999999999999999999999996432  2234456788888776     689999999987754


Q ss_pred             -----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        184 -----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       184 -----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                           ...++|||+++++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        82 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~--~ivH~Dlkp~Nil~--~~~~~~kl~  154 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS--NVIHRDLKPSNLLI--NSNCDLKVC  154 (353)
T ss_dssp             CSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--CTTCCEEEC
T ss_pred             ccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeEE--cCCCcEEEE
Confidence                 689999999999999988764   489999999999999999999964  89999999999999  678889999


Q ss_pred             eCCCceecCCc-------------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy11727        259 DFGSSCHVGQT-------------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK  324 (437)
Q Consensus       259 DFG~s~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~  324 (437)
                      |||++......             ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..
T Consensus       155 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  234 (353)
T 2b9h_A          155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL  234 (353)
T ss_dssp             CCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence            99999765422             123578999999998765 6789999999999999999999999999999999999


Q ss_pred             HHHHhCCCChhhhccCCcc---chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        325 IIEVLGMPPGYLLHGASKT---SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      +....+.|+..........   ..+...++.               .+ ...+....                  .....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~~~------------------~~~~~  280 (353)
T 2b9h_A          235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPM---------------YP-AAPLEKMF------------------PRVNP  280 (353)
T ss_dssp             HHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC---------------CC-CCCHHHHS------------------TTSCH
T ss_pred             HHHHhCCCchhccccccccchhhHHhhcccC---------------CC-Ccchhhhc------------------ccCCH
Confidence            9888887763322111110   011110000               00 00000000                  01112


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+.+||.+||+.||.+|||+.|+|+||||+....
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          281 KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence            6789999999999999999999999999988654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.4e-47  Score=390.36  Aligned_cols=255  Identities=28%  Similarity=0.428  Sum_probs=213.7

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +....++|.+.+.||+|+||+||+|.+..+|+.||||++....    .....+.+|+.+++.+     .||||+++++++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~~~~   85 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-----RHPHIIKLYQVI   85 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            4455789999999999999999999999999999999996432    1234566677777655     789999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      .+.+.+|+||||+++ +|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|
T Consensus        86 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDLkp~NIll--~~~~~vkL~D  159 (476)
T 2y94_A           86 STPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLL--DAHMNAKIAD  159 (476)
T ss_dssp             ECSSEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT--TEECSCCSGGGEEE--CTTCCEEECC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--CCCcccccHHHEEE--ecCCCeEEEe
Confidence            999999999999955 899988754  3599999999999999999999964  89999999999999  6788999999


Q ss_pred             CCCceecCC--ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        260 FGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       260 FG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ||++.....  ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+.......|.. 
T Consensus       160 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~-  238 (476)
T 2y94_A          160 FGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY-  238 (476)
T ss_dssp             CSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTT-
T ss_pred             ccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCcc-
Confidence            999987643  2346789999999999998776 689999999999999999999999988777777665422111100 


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                    ....+.+||.+||+.||.
T Consensus       239 --------------------------------------------------------------~s~~~~~Li~~~L~~dP~  256 (476)
T 2y94_A          239 --------------------------------------------------------------LNPSVISLLKHMLQVDPM  256 (476)
T ss_dssp             --------------------------------------------------------------CCHHHHHHHHHHTCSSTT
T ss_pred             --------------------------------------------------------------CCHHHHHHHHHHcCCCch
Confidence                                                                          001578999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||++|+++||||++.
T Consensus       257 ~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          257 KRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TSCCHHHHHTCHHHHTT
T ss_pred             hCcCHHHHHhCHHhhhc
Confidence            99999999999999763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.6e-47  Score=391.23  Aligned_cols=260  Identities=36%  Similarity=0.492  Sum_probs=215.2

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++...   ......+.+|+.++..+     .||||+++++++.+.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-----CCCCcCeEEEEEEcC
Confidence            4578999999999999999999999999999999998632   22345677899888887     689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEEEeCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIIDFG  261 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL~DFG  261 (437)
                      +.+++||||+.+ +|.+.+....  .+++..++.++.||+.||.|||++  ||+||||||+|||++.. .++.+||+|||
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  169 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDFG  169 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence            999999999965 8988887653  589999999999999999999964  89999999999999542 35679999999


Q ss_pred             CceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        262 SSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       262 ~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ++.....  .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......++...+  
T Consensus       170 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--  246 (486)
T 3mwu_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW--  246 (486)
T ss_dssp             CTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGG--
T ss_pred             cCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccc--
Confidence            9976533  2345689999999999986 5999999999999999999999999999988888877653221111000  


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                              ..                                                 ....+.+||.+||+.||.+||
T Consensus       247 --------~~-------------------------------------------------~s~~~~~li~~~L~~dp~~R~  269 (486)
T 3mwu_A          247 --------RT-------------------------------------------------ISDDAKDLIRKMLTFHPSLRI  269 (486)
T ss_dssp             --------GG-------------------------------------------------SCHHHHHHHHHHTCSSTTTSC
T ss_pred             --------CC-------------------------------------------------CCHHHHHHHHHHcCCChhhCc
Confidence                    00                                                 011578999999999999999


Q ss_pred             CHHHHhcCCCcCcCCC
Q psy11727        420 SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~~  435 (437)
                      |+.|+|+||||++...
T Consensus       270 t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          270 TATQCLEHPWIQKYSS  285 (486)
T ss_dssp             CHHHHHHCHHHHHTCC
T ss_pred             CHHHHhcCHhhccCcc
Confidence            9999999999987543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=6.1e-47  Score=370.17  Aligned_cols=283  Identities=30%  Similarity=0.492  Sum_probs=216.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||||++......   ...+..|+.++..+     .||||+++++++.+.+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-----RHENLVNLLEVCKKKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-----CCCCEeeEEEEeecCCE
Confidence            57899999999999999999999999999999998644321   23355677777776     68999999999999999


Q ss_pred             EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        186 LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       186 ~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      .++||||+++++.+.+.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++..
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~dlkp~Nil~--~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSH--NIIHRDIKPENILV--SQSGVVKLCDFGFART  173 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEECCCTTC--
T ss_pred             EEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC--CEEccCcChheEEE--cCCCcEEEEeCCCcee
Confidence            99999999886555443332 4599999999999999999999964  89999999999999  6788999999999976


Q ss_pred             cCC---ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        266 VGQ---TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       266 ~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   ......||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+....+.++........
T Consensus       174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (331)
T 4aaa_A          174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN  253 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred             ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhh
Confidence            533   23346789999999999875 78999999999999999999999999999999999998888876654432111


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      .... +..                ...|..........               ........+.+||.+||+.||.+|||+
T Consensus       254 ~~~~-~~~----------------~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~L~~dP~~Rpt~  301 (331)
T 4aaa_A          254 KNPV-FAG----------------VRLPEIKEREPLER---------------RYPKLSEVVIDLAKKCLHIDPDKRPFC  301 (331)
T ss_dssp             HCGG-GTT----------------CCCCCCSSCCCHHH---------------HSTTSCHHHHHHHHHHTCSSGGGSCCG
T ss_pred             hccc-ccc----------------ccCccccccchhhh---------------cccchhHHHHHHHHHHhccCcccCCCH
Confidence            1100 000                00000000000000               000112368999999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      .|+|+||||+..
T Consensus       302 ~ell~hp~f~~~  313 (331)
T 4aaa_A          302 AELLHHDFFQMD  313 (331)
T ss_dssp             GGGGGSHHHHGG
T ss_pred             HHHhcCchhccC
Confidence            999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.4e-47  Score=361.82  Aligned_cols=253  Identities=29%  Similarity=0.450  Sum_probs=208.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..++|++.+.||+|+||+||+|.+..++..||+|++....    .....+..|+.++..+     .||||+++++++.+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   81 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDA   81 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECS
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-----CCCCCcchhheEecC
Confidence            3678999999999999999999999999999999986321    1223455566666554     689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++....  .+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|||+
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~--~~i~H~dlkp~Nili--~~~~~~~l~Dfg~  155 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHS--KRVIHRDIKPENLLL--GSAGELKIADFGW  155 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT--TTCEECCCCGGGEEE--CTTSCEEECSCCE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHhEEE--cCCCCEEEEeccc
Confidence            999999999975 8888887653  58999999999999999999995  489999999999999  6788999999999


Q ss_pred             ceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        263 SCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       263 s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +...... .....|++.|+|||++.+..++.++||||||+++|+|++|.+||.+.+..+....+.......|..      
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------  229 (279)
T 3fdn_A          156 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF------  229 (279)
T ss_dssp             ESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTT------
T ss_pred             cccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCc------
Confidence            8655332 345678999999999999999999999999999999999999999988877777665422111100      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                               ....+.+||.+||+.||.+|||+
T Consensus       230 ---------------------------------------------------------~~~~~~~li~~~l~~~p~~Rps~  252 (279)
T 3fdn_A          230 ---------------------------------------------------------VTEGARDLISRLLKHNPSQRPML  252 (279)
T ss_dssp             ---------------------------------------------------------SCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             ---------------------------------------------------------CCHHHHHHHHHHhccChhhCCCH
Confidence                                                                     01157899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      +|+++||||+...
T Consensus       253 ~e~l~h~~~~~~~  265 (279)
T 3fdn_A          253 REVLEHPWITANS  265 (279)
T ss_dssp             HHHHHCHHHHHHC
T ss_pred             HHHhhCccccCCc
Confidence            9999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2e-46  Score=371.90  Aligned_cols=258  Identities=28%  Similarity=0.476  Sum_probs=213.6

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---------chHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---------LNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---------~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+|+.||||++......         ...+..|+.++..+.    .||||+++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~  165 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA----GHPHIITL  165 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEeEE
Confidence            44567899999999999999999999999999999999754311         234566777777763    68999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      ++++...+..++||||+.| +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~--gi~H~Dlkp~NIl~--~~~~~i  239 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN--NIVHRDLKPENILL--DDNMQI  239 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCCE
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEE--CCCCCE
Confidence            9999999999999999966 899988765  3589999999999999999999964  89999999999999  678899


Q ss_pred             EEEeCCCceecCC--ccccccccccccChhhhcC------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q psy11727        256 KIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE  327 (437)
Q Consensus       256 kL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~  327 (437)
                      ||+|||++.....  .....+||+.|+|||++.+      ..++.++|||||||++|+|++|.+||.+.+....+..+..
T Consensus       240 kl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~  319 (365)
T 2y7j_A          240 RLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME  319 (365)
T ss_dssp             EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            9999999987643  3345689999999999863      3588999999999999999999999999888777776655


Q ss_pred             HhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q psy11727        328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI  407 (437)
Q Consensus       328 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  407 (437)
                      ....++...+..                                                           ....+.+||
T Consensus       320 ~~~~~~~~~~~~-----------------------------------------------------------~~~~~~~li  340 (365)
T 2y7j_A          320 GQYQFSSPEWDD-----------------------------------------------------------RSSTVKDLI  340 (365)
T ss_dssp             TCCCCCHHHHSS-----------------------------------------------------------SCHHHHHHH
T ss_pred             CCCCCCCccccc-----------------------------------------------------------CCHHHHHHH
Confidence            322222111100                                                           001578999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        408 LRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       408 ~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      .+||+.||.+|||+.|+|+||||++
T Consensus       341 ~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          341 SRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHcCCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999999975

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.2e-46  Score=364.98  Aligned_cols=252  Identities=25%  Similarity=0.428  Sum_probs=208.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .|...+.||+|+||+||+|.+..+|+.||||++..... ....+..|+.++..+     .|+||+++++++...+..++|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEEE
Confidence            47788899999999999999999999999999975432 234466677776655     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++...   .+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++.....
T Consensus       121 ~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll--~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          121 MEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ--GVIHRDIKSDSILL--TLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             ECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--CCCCcEEEeeeeeeeeccc
Confidence            999965 788877643   489999999999999999999964  89999999999999  6788899999999977643


Q ss_pred             c---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        269 T---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       269 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      .   .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+....  ++....        
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~--------  263 (321)
T 2c30_A          194 DVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP--PPKLKN--------  263 (321)
T ss_dssp             SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS--CCCCTT--------
T ss_pred             CccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCcCc--------
Confidence            2   345679999999999999999999999999999999999999999988777666554311  110000        


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                                                        .......+.+||.+||+.||.+|||++|++
T Consensus       264 --------------------------------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell  293 (321)
T 2c30_A          264 --------------------------------------------------SHKVSPVLRDFLERMLVRDPQERATAQELL  293 (321)
T ss_dssp             --------------------------------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             --------------------------------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence                                                              000012578999999999999999999999


Q ss_pred             cCCCcCcCC
Q psy11727        426 RHEFFLKHS  434 (437)
Q Consensus       426 ~Hp~~~~~~  434 (437)
                      +||||++..
T Consensus       294 ~hp~~~~~~  302 (321)
T 2c30_A          294 DHPFLLQTG  302 (321)
T ss_dssp             TSGGGGGCC
T ss_pred             cChhhccCC
Confidence            999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4e-47  Score=394.88  Aligned_cols=257  Identities=30%  Similarity=0.454  Sum_probs=212.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++....    .....+..|+.+++.+     .|||||+++++|.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEee
Confidence            34578999999999999999999999999999999996421    2234456788888776     68999999999999


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+|+||||+. |+|.+++.......+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~--gIvHrDLKPeNILl--d~~g~vKL~DFG  331 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--RIVYRDLKPENILL--DDHGHIRISDLG  331 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTSCEEECCCT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CEeccCCchheEEE--eCCCCeEEEecc
Confidence            999999999995 5899988876655699999999999999999999964  89999999999999  778899999999


Q ss_pred             CceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE----VDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~p~~~  335 (437)
                      ++.....  .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+.    ......+...   +.. 
T Consensus       332 la~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~---~~~-  407 (576)
T 2acx_A          332 LAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---PEE-  407 (576)
T ss_dssp             TCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC---CCC-
T ss_pred             cceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc---ccc-
Confidence            9987643  33457899999999999999999999999999999999999999987642    2233332211   000 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                      .|                           ......+.+||.+||+.||
T Consensus       408 --------------------------------~p---------------------------~~~s~~~~dLI~~lL~~dP  428 (576)
T 2acx_A          408 --------------------------------YS---------------------------ERFSPQARSLCSQLLCKDP  428 (576)
T ss_dssp             --------------------------------CC---------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred             --------------------------------CC---------------------------ccCCHHHHHHHHHhccCCH
Confidence                                            00                           0001257899999999999


Q ss_pred             CCCC-----CHHHHhcCCCcCcCCC
Q psy11727        416 KKRI-----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~-----t~~e~l~Hp~~~~~~~  435 (437)
                      .+||     |++|+++||||++.++
T Consensus       429 ~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          429 AERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             GGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             HHcCCCCCCCHHHHHhChhhccCCH
Confidence            9999     8999999999998654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.2e-46  Score=358.03  Aligned_cols=262  Identities=29%  Similarity=0.436  Sum_probs=214.3

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----------ccchHHHHHHHHHHHhhhcCCCCCcEEE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----------PFLNQAQIEVQLLEKINKADIHSRYIVK  175 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----------~~~~~~~~e~~~~~~l~~~~~~h~~iv~  175 (437)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++....          .....+..|+.++..+.    .||||++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~   88 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS----GHPNIIQ   88 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCC
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEee
Confidence            345789999999999999999999999999999999997432          11234556888887774    5899999


Q ss_pred             ecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        176 LKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       176 l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      +++++...+..++||||+++ +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~  162 (298)
T 1phk_A           89 LKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL--NIVHRDLKPENILL--DDDMN  162 (298)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCC
T ss_pred             eeeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCcceEEE--cCCCc
Confidence            99999999999999999964 899998765  3589999999999999999999954  89999999999999  67888


Q ss_pred             EEEEeCCCceecCC--ccccccccccccChhhhc------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLL------GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       255 ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                      +||+|||++.....  ......|++.|+|||++.      ...++.++||||||+++|+|++|..||.+.+.......+.
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  242 (298)
T 1phk_A          163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM  242 (298)
T ss_dssp             EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh
Confidence            99999999977643  334567899999999985      4568899999999999999999999999988877766665


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      ......+....                                                           ......+.+|
T Consensus       243 ~~~~~~~~~~~-----------------------------------------------------------~~~~~~l~~l  263 (298)
T 1phk_A          243 SGNYQFGSPEW-----------------------------------------------------------DDYSDTVKDL  263 (298)
T ss_dssp             HTCCCCCTTTG-----------------------------------------------------------GGSCHHHHHH
T ss_pred             cCCcccCcccc-----------------------------------------------------------cccCHHHHHH
Confidence            53211110000                                                           0001257899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcCCCC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  436 (437)
                      |.+||+.||.+|||+.|+++||||++...+
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  293 (298)
T 1phk_A          264 VSRFLVVQPQKRYTAEEALAHPFFQQYVVE  293 (298)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTSGGGCTTC--
T ss_pred             HHHHccCCcccCCCHHHHHhChHhhhccch
Confidence            999999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-46  Score=360.70  Aligned_cols=259  Identities=27%  Similarity=0.360  Sum_probs=206.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|.+.+.||+|+||+||+|.+..++..||+|++.....  ....+..|+.+++.+     .||||+++++++.+.+
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-----DHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-----CCchHHhHHHheecCC
Confidence            346789999999999999999999999999999999975432  235677788888776     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeC
Q psy11727        185 HLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDF  260 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DF  260 (437)
                      ..++||||+++ +|.+.+...  ....+++..++.++.||+.||+|||++  ||+||||||+|||+.. +.++.+||+||
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~dikp~NIl~~~~~~~~~~kl~Df  171 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ--HVVHKDLKPENILFQDTSPHSPIKIIDF  171 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC--CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence            99999999965 898887543  235699999999999999999999964  8999999999999954 23577999999


Q ss_pred             CCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |++.....  ......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+..+....+.......+..   
T Consensus       172 g~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~---  247 (285)
T 3is5_A          172 GLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE---  247 (285)
T ss_dssp             CCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC----
T ss_pred             ecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc---
Confidence            99976533  234567899999999986 478999999999999999999999999988766655443211000000   


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                      .                         ......+.+||.+||+.||.+|
T Consensus       248 --------------------------------~-------------------------~~~~~~~~~li~~~L~~dP~~R  270 (285)
T 3is5_A          248 --------------------------------C-------------------------RPLTPQAVDLLKQMLTKDPERR  270 (285)
T ss_dssp             ----------------------------------------------------------CCCCHHHHHHHHHHTCSCTTTS
T ss_pred             --------------------------------c-------------------------CcCCHHHHHHHHHHccCChhhC
Confidence                                            0                         0001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      ||+.|+|+||||++.
T Consensus       271 ps~~e~l~hp~f~~a  285 (285)
T 3is5_A          271 PSAAQVLHHEWFKQA  285 (285)
T ss_dssp             CCHHHHHTSGGGGC-
T ss_pred             cCHHHHhcCHHhhcC
Confidence            999999999999863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.3e-46  Score=372.06  Aligned_cols=287  Identities=28%  Similarity=0.465  Sum_probs=218.5

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc------------chHHHHHHHHHHHhhhcCCCCC
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF------------LNQAQIEVQLLEKINKADIHSR  171 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~------------~~~~~~e~~~~~~l~~~~~~h~  171 (437)
                      ....+.++|.+.+.||+|+||.||+|.+.. +..||||++......            ...+.+|+.++..+     .||
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~   89 (362)
T 3pg1_A           16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-----HHP   89 (362)
T ss_dssp             HHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-----CCT
T ss_pred             HHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-----CCc
Confidence            344567899999999999999999998755 889999998632211            25667788888877     689


Q ss_pred             cEEEecceeeE-----CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEE
Q psy11727        172 YIVKLKGHFTW-----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       172 ~iv~l~~~~~~-----~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIl  246 (437)
                      ||+++++++..     ...+|+||||++++|.+.+.... ..+++..++.++.||+.||.|||++  ||+||||||+|||
T Consensus        90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGNIL  166 (362)
T ss_dssp             TBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEE
T ss_pred             CccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC--cCEecCCChHHEE
Confidence            99999999854     34799999999999999888654 4689999999999999999999964  8999999999999


Q ss_pred             EecCCCCCEEEEeCCCceecCC--ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT  323 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~  323 (437)
                      +  +.++.+||+|||++.....  ......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+.
T Consensus       167 ~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          167 L--ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             E--CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             E--cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            9  6788899999999975432  2344678999999999987 678999999999999999999999999999999999


Q ss_pred             HHHHHhCCCChhhhccCCcc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        324 KIIEVLGMPPGYLLHGASKT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       324 ~i~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      .+.+..+.|+..........  ..++....              ...+.. .....                  ......
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~------------------~~~~~~  291 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSL--------------SNVPAR-AWTAV------------------VPTADP  291 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTTTCC--------------CCCCCC-CHHHH------------------STTSCH
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHHhhc--------------ccCChh-hHHhh------------------CCCCCH
Confidence            99999998876654332211  11111000              000000 00000                  001123


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+.+||.+||++||.+|||+.|+|+||||++..
T Consensus       292 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          292 VALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            578999999999999999999999999999763

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.7e-46  Score=364.76  Aligned_cols=287  Identities=25%  Similarity=0.441  Sum_probs=214.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--CCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--KNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||++....  ...+..|+.+++.+.    .|+||+++++++.+  ....
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLR----GGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHT----TSTTBCCEEEEEECTTTCCE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcC----CCCCEEEeeeeeccCCCCce
Confidence            578999999999999999999999999999999997433  467888999999985    58999999999987  6789


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+.+ +|.+++.     .+++..++.++.||+.||+|||++  ||+||||||+|||++. +...+||+|||++..
T Consensus       109 ~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~~~-~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM--GIMHRDVKPHNVMIDH-EHRKLRLIDWGLAEF  180 (330)
T ss_dssp             EEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEET-TTTEEEECCCTTCEE
T ss_pred             EEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHEEEcC-CCCEEEEEeCCCceE
Confidence            999999976 6776653     278999999999999999999964  8999999999999942 333799999999976


Q ss_pred             cCC--ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCChhhh-ccC
Q psy11727        266 VGQ--TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLF-SGKNEVDQMTKIIEVLGMPPGYLL-HGA  340 (437)
Q Consensus       266 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf-~~~~~~~~~~~i~~~~~~p~~~~~-~~~  340 (437)
                      ...  ......||..|+|||++.+ ..++.++|||||||++|+|++|..|| .+.+..+.+..+...++.+...-. ...
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence            533  3345678999999999987 67999999999999999999999888 556677777777776664332111 100


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                      ..             ...             ..+.+++.......-. ..............+.+||.+||++||.+|||
T Consensus       261 ~~-------------~~~-------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  313 (330)
T 3nsz_A          261 NI-------------ELD-------------PRFNDILGRHSRKRWE-RFVHSENQHLVSPEALDFLDKLLRYDHQSRLT  313 (330)
T ss_dssp             TC-------------CCC-------------THHHHHHCCCCCCCGG-GGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC
T ss_pred             cc-------------ccc-------------cchhhhhhhccccchh-hhccccccccCCHHHHHHHHHHhcCCcccCCC
Confidence            00             000             0000000000000000 00000001112236899999999999999999


Q ss_pred             HHHHhcCCCcCcCCCC
Q psy11727        421 PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~~~  436 (437)
                      ++|+|+||||++...|
T Consensus       314 a~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          314 AREAMEHPYFYTVVKD  329 (330)
T ss_dssp             HHHHHTSGGGTTCC--
T ss_pred             HHHHhcCccHhhhccC
Confidence            9999999999988765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.2e-46  Score=390.11  Aligned_cols=256  Identities=28%  Similarity=0.397  Sum_probs=210.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      -.++|.+.+.||+|+||+||+|++..+|+.||+|++....    .....+..|+.+++.+     .||||++++++|.+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~  257 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRFIVSLAYAFETK  257 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEeeC
Confidence            3578999999999999999999999999999999996432    2234566788888776     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      +.+|+||||+.| +|.+++....  ...+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+||
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~--gIvHrDLKP~NILl--~~~g~vkL~DF  333 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--NIIYRDLKPENVLL--DDDGNVRISDL  333 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTSCEEECCC
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc--CCcccCCChHHEEE--eCCCCEEEeec
Confidence            999999999965 8988887643  34699999999999999999999964  89999999999999  77889999999


Q ss_pred             CCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCC
Q psy11727        261 GSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN----EVDQMTKIIEVLGMPP  333 (437)
Q Consensus       261 G~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~p~  333 (437)
                      |++......   ....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+    ..+....+.......|
T Consensus       334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p  413 (543)
T 3c4z_A          334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP  413 (543)
T ss_dssp             TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC
T ss_pred             ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC
Confidence            999876432   234589999999999999999999999999999999999999998763    2344444433111000


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .                                                               .....+.+||.+||+.
T Consensus       414 ~---------------------------------------------------------------~~s~~~~~li~~lL~~  430 (543)
T 3c4z_A          414 D---------------------------------------------------------------KFSPASKDFCEALLQK  430 (543)
T ss_dssp             T---------------------------------------------------------------TSCHHHHHHHHHHSCS
T ss_pred             c---------------------------------------------------------------ccCHHHHHHHHHhccC
Confidence            0                                                               0012578999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCcCcCCC
Q psy11727        414 DPKKRIS-----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t-----~~e~l~Hp~~~~~~~  435 (437)
                      ||.+||+     ++++++||||+..++
T Consensus       431 dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          431 DPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             SGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             CHhHCCCCcccCHHHHHcCccccCCCH
Confidence            9999996     589999999998654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.6e-46  Score=362.45  Aligned_cols=261  Identities=28%  Similarity=0.361  Sum_probs=214.5

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+++.||+|++..... ....+.+|+.++..+     .||||+++++++.+.+
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-----KHENIVTLEDIYESTT   79 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-----CCCCeeehhhhcccCC
Confidence            3456789999999999999999999999999999999975432 234567788888876     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCC
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGS  262 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~  262 (437)
                      .+++||||+++ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+||++.. +.++.+||+|||+
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~  155 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN--GIVHRDLKPENLLYLTPEENSKIMITDFGL  155 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT--TCCCCSCCGGGCEESSSSTTCCEEBCSCST
T ss_pred             EEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCHHHEEEecCCCCCCEEEccCCc
Confidence            99999999965 8999887653  589999999999999999999964  8999999999999943 3567899999999


Q ss_pred             ceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        263 SCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       263 s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +...... .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+.+.....+....    
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----  231 (304)
T 2jam_A          156 SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFW----  231 (304)
T ss_dssp             TCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTT----
T ss_pred             ceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcccc----
Confidence            9765433 33457899999999999999999999999999999999999999998887777776553211110000    


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                            .                                                 .....+.+||.+||+.||.+|||+
T Consensus       232 ------~-------------------------------------------------~~~~~~~~li~~~l~~dp~~Rps~  256 (304)
T 2jam_A          232 ------D-------------------------------------------------DISESAKDFICHLLEKDPNERYTC  256 (304)
T ss_dssp             ------T-------------------------------------------------TSCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             ------c-------------------------------------------------cCCHHHHHHHHHHcCCChhHCcCH
Confidence                  0                                                 001257899999999999999999


Q ss_pred             HHHhcCCCcCcCC
Q psy11727        422 TNVLRHEFFLKHS  434 (437)
Q Consensus       422 ~e~l~Hp~~~~~~  434 (437)
                      +|+++||||++..
T Consensus       257 ~~~l~h~~~~~~~  269 (304)
T 2jam_A          257 EKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHTSHHHHSSC
T ss_pred             HHHhcCccccCCC
Confidence            9999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.2e-46  Score=371.20  Aligned_cols=255  Identities=25%  Similarity=0.350  Sum_probs=211.7

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..++|.+.+.||+|+||+||+|.+..+++.||||++.....    ....+..|+.++..+     .||||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~  126 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLRE  126 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEET
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEC
Confidence            34679999999999999999999999999999999974322    123466788888776     689999999999999


Q ss_pred             CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        184 NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       184 ~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      +..++||||+.|+|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus       127 ~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kL~DfG~a  201 (348)
T 1u5q_A          127 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH--NMIHRDVKAGNILL--SEPGLVKLGDFGSA  201 (348)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEE--ETTTEEEECCCTTC
T ss_pred             CeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHEEE--CCCCCEEEeeccCc
Confidence            9999999999999999886544 4689999999999999999999964  89999999999999  56788999999999


Q ss_pred             eecCCccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ...... ....||+.|+|||++.   +..++.++|||||||++|||++|++||.+.+....+..+......+..      
T Consensus       202 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~------  274 (348)
T 1u5q_A          202 SIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ------  274 (348)
T ss_dssp             BSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCC------
T ss_pred             eecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC------
Confidence            766543 4568999999999985   467899999999999999999999999988877666655432110000      


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                          +.   .....+.+||.+||+.||.+|||
T Consensus       275 ----------------------------------------------------~~---~~~~~l~~li~~~l~~dP~~Rps  299 (348)
T 1u5q_A          275 ----------------------------------------------------SG---HWSEYFRNFVDSCLQKIPQDRPT  299 (348)
T ss_dssp             ----------------------------------------------------CT---TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ----------------------------------------------------CC---CCCHHHHHHHHHHcccChhhCcC
Confidence                                                                00   00125789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      ++++++||||.+..
T Consensus       300 ~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          300 SEVLLKHRFVLRER  313 (348)
T ss_dssp             HHHHTTCHHHHSCC
T ss_pred             HHHHhhChhhhccC
Confidence            99999999997643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.9e-46  Score=365.36  Aligned_cols=253  Identities=25%  Similarity=0.355  Sum_probs=198.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++...  .....+.+|+.++..+     .||||++++++|.+.+
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-----CCTTBCCEEEEEEECC
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEec
Confidence            45688999999999999999999999999999999997432  2334566777777766     7899999999986543


Q ss_pred             ---------------------------------------------------------EEEEEEEeccC-cHHHHHHhcCC
Q psy11727        185 ---------------------------------------------------------HLCLVFELLSY-NLYNLIRNTNF  206 (437)
Q Consensus       185 ---------------------------------------------------------~~~lV~E~~~~-~L~~~l~~~~~  206 (437)
                                                                               ++++||||+.+ +|.+++.....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~  157 (332)
T 3qd2_B           78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS  157 (332)
T ss_dssp             SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS
T ss_pred             cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC
Confidence                                                                     48999999965 89998876432


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc---------------c
Q psy11727        207 -HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---------------L  270 (437)
Q Consensus       207 -~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~---------------~  270 (437)
                       ...++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++......               .
T Consensus       158 ~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~  233 (332)
T 3qd2_B          158 LEDREHGVCLHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFF--TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH  233 (332)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCCTTCEECSCC--------------CC
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhC--CeeecCCCcccEEE--eCCCCEEEeecCcccccccchhhccccccccccccc
Confidence             2356677899999999999999964  89999999999999  67889999999999876443               1


Q ss_pred             ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChhhhccCCccchhhcc
Q psy11727        271 YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL-GMPPGYLLHGASKTSKYFDR  349 (437)
Q Consensus       271 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~  349 (437)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|..|+..     ....+.... +..+...             
T Consensus       234 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~~~~~~-------------  295 (332)
T 3qd2_B          234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKFPLLF-------------  295 (332)
T ss_dssp             CSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTCCCHHH-------------
T ss_pred             cccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccCCCccc-------------
Confidence            235689999999999999999999999999999999998776532     111111111 1111100             


Q ss_pred             cCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCC
Q psy11727        350 LSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEF  429 (437)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~  429 (437)
                                                                     ......+.+||.+||+.||.+|||+.|+|+|||
T Consensus       296 -----------------------------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          296 -----------------------------------------------TQKYPQEHMMVQDMLSPSPTERPEATDIIENAI  328 (332)
T ss_dssp             -----------------------------------------------HHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred             -----------------------------------------------ccCChhHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence                                                           001125689999999999999999999999999


Q ss_pred             cCcC
Q psy11727        430 FLKH  433 (437)
Q Consensus       430 ~~~~  433 (437)
                      |++.
T Consensus       329 f~~~  332 (332)
T 3qd2_B          329 FENL  332 (332)
T ss_dssp             CCCC
T ss_pred             hhcC
Confidence            9863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.2e-46  Score=356.19  Aligned_cols=258  Identities=29%  Similarity=0.442  Sum_probs=210.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +.++|++.+.||+|+||+||+|.+..+++.||+|++.....       ....+..|+.++..+     .||||+++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   77 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-----RHPNIITLHDIF   77 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-----CCCCeeehhhee
Confidence            35689999999999999999999999999999999874321       235677888888877     689999999999


Q ss_pred             eECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC--CCCEEE
Q psy11727        181 TWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK--RSAIKI  257 (437)
Q Consensus       181 ~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~--~~~ikL  257 (437)
                      .+.+..++|||+++ ++|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+||+++.+.  .+.+||
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nil~~~~~~~~~~~kl  153 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK--RIAHFDLKPENIMLLDKNVPNPRIKL  153 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCChHHEEEecCCCCCCceEE
Confidence            99999999999995 58999887653  589999999999999999999964  899999999999994322  227999


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||++......  .....|++.|+|||++.+..++.++||||||+++|+|++|..||.+.+..+....+.......+..
T Consensus       154 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T 3bhy_A          154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE  233 (283)
T ss_dssp             CCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             EecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcch
Confidence            999999876432  234578999999999999999999999999999999999999999988877766664422211111


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ....                                                           ....+.+||.+||+.||
T Consensus       234 ~~~~-----------------------------------------------------------~~~~~~~li~~~l~~dp  254 (283)
T 3bhy_A          234 YFSN-----------------------------------------------------------TSELAKDFIRRLLVKDP  254 (283)
T ss_dssp             HHTT-----------------------------------------------------------CCHHHHHHHHTTSCSSG
T ss_pred             hccc-----------------------------------------------------------CCHHHHHHHHHHccCCH
Confidence            1100                                                           00157899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|||+.|+++||||++.
T Consensus       255 ~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          255 KRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             GGSCCHHHHHHCHHHHHH
T ss_pred             hHCcCHHHHHhCHHHHHH
Confidence            999999999999999764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-46  Score=362.05  Aligned_cols=287  Identities=29%  Similarity=0.428  Sum_probs=214.8

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee--
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF--  180 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~--  180 (437)
                      .+..+.++|++.+.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.+     .||||+++++++  
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~   79 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVFEILGP   79 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECT
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-----CCCCeeEEEEeccc
Confidence            35567889999999999999999999999999999999987443 2234566777777766     789999999877  


Q ss_pred             ------------eECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        181 ------------TWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       181 ------------~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                                  ...+..++||||++++|.+++..   ..+++..++.++.||+.||+|||++  ||+||||||+|||++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~  154 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA--NVLHRDLKPANLFIN  154 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEEE
T ss_pred             cccccccccccccccCceeEEeeccCCCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEEc
Confidence                        34578999999999999998865   3589999999999999999999964  899999999999995


Q ss_pred             cCCCCCEEEEeCCCceecCC------ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQ------TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ  321 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~  321 (437)
                       ..++.+||+|||++.....      ......++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.
T Consensus       155 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  233 (320)
T 2i6l_A          155 -TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ  233 (320)
T ss_dssp             -TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             -CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence             2456899999999976532      1234567889999999876 6789999999999999999999999999999888


Q ss_pred             HHHHHHHhCCCChhhhccCCccc-hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTS-KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      +..+......+............ .+....               ...+ ...+....                  ....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~~~~~~~------------------~~~~  279 (320)
T 2i6l_A          234 MQLILESIPVVHEEDRQELLSVIPVYIRND---------------MTEP-HKPLTQLL------------------PGIS  279 (320)
T ss_dssp             HHHHHHHSCCCCHHHHHHHHTTSCHHHHHH---------------TTSC-CCCHHHHS------------------TTCC
T ss_pred             HHHHHHhcCCCchhhhhhhhhcCccccccc---------------ccCC-CCChhHhc------------------chhh
Confidence            88888876665544332111100 000000               0000 00000000                  0011


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ..+.+||.+||+.||.+|||++|+|+||||+....
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          280 REAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            26899999999999999999999999999987654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.7e-46  Score=359.24  Aligned_cols=260  Identities=23%  Similarity=0.326  Sum_probs=192.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|++.+.||+|+||+||+|.+..+++.||+|++........  ..+....+........||||+++++++.+.+..+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHH--HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHH--HHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            35789999999999999999999999999999999974422111  1111111122234568999999999999999999


Q ss_pred             EEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        188 LVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +||||++++|.+++..  .....+++..++.++.||+.||+|||++ .||+||||||+|||+  +.++.+||+|||++..
T Consensus        83 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~i~H~dlkp~Nil~--~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK-LSVIHRDVKPSNVLI--NALGQVKMCDFGISGY  159 (290)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-SCCCCCCCSGGGCEE--CTTCCEEBCCC-----
T ss_pred             EEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc-CCeecCCCCHHHEEE--CCCCCEEEeecCCccc
Confidence            9999999998887754  2335699999999999999999999963 389999999999999  6788999999999976


Q ss_pred             cCCcc--ccccccccccChhhh----cCCCCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhhhc
Q psy11727        266 VGQTL--YQYIQSRYYRSPEVL----LGIPYDLAIDMWSLGCILVELHTGEPLFSGK-NEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       266 ~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      .....  ....||+.|+|||++    .+..++.++|||||||++|+|++|+.||... .....+..+........     
T Consensus       160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----  234 (290)
T 3fme_A          160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL-----  234 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC-----
T ss_pred             ccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc-----
Confidence            64332  235789999999996    4567899999999999999999999999863 34344443332110000     


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                    +                          .......+.+||.+||+.||.+|
T Consensus       235 ------------------------------~--------------------------~~~~~~~~~~li~~~l~~~p~~R  258 (290)
T 3fme_A          235 ------------------------------P--------------------------ADKFSAEFVDFTSQCLKKNSKER  258 (290)
T ss_dssp             ------------------------------C--------------------------TTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             ------------------------------c--------------------------cccCCHHHHHHHHHHhhcChhhC
Confidence                                          0                          00001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      ||+.|+++||||+..
T Consensus       259 pt~~e~l~hp~f~~~  273 (290)
T 3fme_A          259 PTYPELMQHPFFTLH  273 (290)
T ss_dssp             CCHHHHTTSHHHHHH
T ss_pred             cCHHHHHhCcccccC
Confidence            999999999999753

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=9.6e-47  Score=374.73  Aligned_cols=263  Identities=17%  Similarity=0.147  Sum_probs=191.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecc------
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKG------  178 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~------  178 (437)
                      ...|.+.+.||+|+||+||+|.+..+++.||||++....    .....+..|+.+++.+..   .||||++++.      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~---~hp~iv~~~~~~~~p~  137 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG---ESPEEARDRRRLLLPS  137 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------------CBCCCC
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc---cChhhhhhceeEEeee
Confidence            345999999999999999999999999999999998643    223445567777777754   6899887653      


Q ss_pred             -eeeEC-----------------CEEEEEEEeccCcHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHhcCCCCC
Q psy11727        179 -HFTWK-----------------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLT------KKFAQQLCCALAFLSSPELS  234 (437)
Q Consensus       179 -~~~~~-----------------~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~------~~i~~qi~~aL~~LH~~~~g  234 (437)
                       ++...                 ..+|+||||++++|.+++.... ..+++..+      ..++.||+.||+|||++  |
T Consensus       138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--~  214 (371)
T 3q60_A          138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK--G  214 (371)
T ss_dssp             EEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--T
T ss_pred             hheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC--C
Confidence             33322                 4489999999999999998643 23455555      67789999999999964  8


Q ss_pred             eeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        235 IIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       235 iiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      |+||||||+|||+  +.++.+||+|||+|...+.......+|+.|+|||++.+  ..++.++|||||||++|||++|++|
T Consensus       215 ivHrDikp~NIll--~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          215 LVHGHFTPDNLFI--MPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             EEETTCSGGGEEE--CTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CccCcCCHHHEEE--CCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999999  67889999999999988776656677899999999987  6799999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+......                .       .+.....      ..........+..                     
T Consensus       293 f~~~~~~~~----------------~-------~~~~~~~------~~~~~~~~~~~~~---------------------  322 (371)
T 3q60_A          293 FGLVTPGIK----------------G-------SWKRPSL------RVPGTDSLAFGSC---------------------  322 (371)
T ss_dssp             TTBCCTTCT----------------T-------CCCBCCT------TSCCCCSCCCTTS---------------------
T ss_pred             CCCcCcccc----------------c-------chhhhhh------hhccccccchhhc---------------------
Confidence            987643100                0       0000000      0000000000000                     


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                          ......+.+||.+||+.||.+|||+.|+|+||||++.
T Consensus       323 ----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          323 ----TPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             ----SCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             ----cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence                0111267999999999999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=4.9e-46  Score=355.50  Aligned_cols=251  Identities=26%  Similarity=0.444  Sum_probs=211.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     .|+||+++++++.+.+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-----RHPNILRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-----CCCCEeeEEEEEEcCC
Confidence            578999999999999999999999999999999986321    2234566777777766     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||++
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~kl~Dfg~~  161 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER--KVIHRDIKPENLLM--GYKGELKIADFGWS  161 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEE--CTTCCEEECCCTTC
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCHHHEEE--cCCCCEEEeccccc
Confidence            99999999965 8999887753  489999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        264 CHVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       264 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..... ......|++.|+|||++.+..++.++||||||+++|+|++|.+||.+.+..+....+.......|.        
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------  233 (284)
T 2vgo_A          162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP--------  233 (284)
T ss_dssp             EECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT--------
T ss_pred             ccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCC--------
Confidence            76543 234567899999999999999999999999999999999999999988877666655431100000        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||.+|||++
T Consensus       234 -------------------------------------------------------~~~~~~~~li~~~l~~~p~~Rps~~  258 (284)
T 2vgo_A          234 -------------------------------------------------------FLSDGSKDLISKLLRYHPPQRLPLK  258 (284)
T ss_dssp             -------------------------------------------------------TSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             -------------------------------------------------------cCCHHHHHHHHHHhhcCHhhCCCHH
Confidence                                                                   0012578999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      ++++||||+..
T Consensus       259 ~ll~h~~~~~~  269 (284)
T 2vgo_A          259 GVMEHPWVKAN  269 (284)
T ss_dssp             HHHTCHHHHHH
T ss_pred             HHhhCHHHHhh
Confidence            99999999764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-46  Score=361.62  Aligned_cols=262  Identities=25%  Similarity=0.418  Sum_probs=210.8

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--  182 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--  182 (437)
                      .....++|++.+.||+|+||.||+|.+..+++.||||++.........+..|+.++..+.    .||||+++++++..  
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHRNIATYYGAFIKKN   94 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHC----CSTTBCCEEEEEEECC
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhcc----CCCCeeeeeeEEeecc
Confidence            344578999999999999999999999999999999999766555677888999888874    68999999999987  


Q ss_pred             ----CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        183 ----KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       183 ----~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                          .+.+++||||+++ +|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~NIl~--~~~~~~kl  170 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH--KVIHRDIKGQNVLL--TENAEVKL  170 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEE--CTTCCEEE
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCcHHHEEE--cCCCCEEE
Confidence                5689999999976 899999876545689999999999999999999964  89999999999999  67888999


Q ss_pred             EeCCCceecCCc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        258 IDFGSSCHVGQT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       258 ~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      +|||++......   .....||+.|+|||++.     +..++.++|||||||++|+|++|.+||.+.+.......+....
T Consensus       171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  250 (326)
T 2x7f_A          171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP  250 (326)
T ss_dssp             CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc
Confidence            999999765432   23457899999999997     5678999999999999999999999999888766555443210


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                        .+...               .                                            ......+.+||.+
T Consensus       251 --~~~~~---------------~--------------------------------------------~~~~~~l~~li~~  269 (326)
T 2x7f_A          251 --APRLK---------------S--------------------------------------------KKWSKKFQSFIES  269 (326)
T ss_dssp             --CCCCS---------------C--------------------------------------------SCSCHHHHHHHHH
T ss_pred             --cccCC---------------c--------------------------------------------cccCHHHHHHHHH
Confidence              00000               0                                            0001257899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||..||.+|||+.++++||||++...
T Consensus       270 ~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          270 CLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             HCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             HhccChhhCCCHHHHhhChHHhhCcc
Confidence            99999999999999999999987653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-46  Score=358.45  Aligned_cols=253  Identities=30%  Similarity=0.506  Sum_probs=183.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||++....    .....+..|+.++..+     .||||+++++++.+.+
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-----KHPSILELYNYFEDSN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-----CCTTBCCEEEEEECSS
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-----CCCCeEeEEEEEccCC
Confidence            468999999999999999999999999999999996432    1224556677766655     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||++
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nili--~~~~~~kl~dfg~~  159 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH--GILHRDLTLSNLLL--TRNMNIKIADFGLA  159 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECSSCCGGGEEE--CTTCCEEECCCTTC
T ss_pred             eEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHEEE--cCCCCEEEEeecce
Confidence            99999999965 8888887643 4689999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   ......||+.|+|||++.+..++.++|||||||++|+|++|++||...+..+.+..+..             
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------  226 (278)
T 3cok_A          160 TQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------------  226 (278)
T ss_dssp             EECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS-------------
T ss_pred             eeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh-------------
Confidence            87642   22346789999999999998999999999999999999999999987654322221100             


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                  ..+           ..|.                           .....+.+||.+||+.||.+|||
T Consensus       227 ------------~~~-----------~~~~---------------------------~~~~~~~~li~~~l~~dp~~Rps  256 (278)
T 3cok_A          227 ------------ADY-----------EMPS---------------------------FLSIEAKDLIHQLLRRNPADRLS  256 (278)
T ss_dssp             ------------SCC-----------CCCT---------------------------TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             ------------ccc-----------CCcc---------------------------ccCHHHHHHHHHHcccCHhhCCC
Confidence                        000           0000                           00125789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      ++++++||||++..
T Consensus       257 ~~~~l~h~~~~~~~  270 (278)
T 3cok_A          257 LSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHHTTSTTTC---
T ss_pred             HHHHhcCccccCCC
Confidence            99999999998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.1e-47  Score=376.39  Aligned_cols=301  Identities=24%  Similarity=0.325  Sum_probs=209.6

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      +...++|++.+.||+|+||+||+|.+..++..||+|++....  .....+..|+.++..+     .||||+++++++.+.
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSD  103 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-----CCTTBCCEEEEEEET
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-----CCCCEEEEeEEEEEC
Confidence            444678999999999999999999999999999999997542  1223444555555444     799999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++||||+++ +|.+++....  .+++..+..++.||+.||+|||+. .||+||||||+|||+  +.++.+||+|||+
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~--~~~~~~kl~Dfg~  178 (360)
T 3eqc_A          104 GEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILV--NSRGEIKLCDFGV  178 (360)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHH-HCCCCSCCSGGGEEE--CTTCCEEECCCCC
T ss_pred             CEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHh-CCEEcCCccHHHEEE--CCCCCEEEEECCC
Confidence            999999999965 8999987753  489999999999999999999963 279999999999999  6788899999999


Q ss_pred             ceecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        263 SCHVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       263 s~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+.......+........
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3eqc_A          179 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR  258 (360)
T ss_dssp             CHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------
T ss_pred             CcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcc
Confidence            865432 2335688999999999999999999999999999999999999999887765544332211111111100000


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      .....+.........          .......+..+....   +      ....+......+.+||.+||++||.+|||+
T Consensus       259 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  319 (360)
T 3eqc_A          259 TPGRPLNKFGMDSRP----------PMAIFELLDYIVNEP---P------PKLPSGVFSLEFQDFVNKCLIKNPAERADL  319 (360)
T ss_dssp             -------------------------CCCHHHHHHHHHHSC---C------CCCCTTTSCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             cCCCcccccccCCCC----------cccchhhhhHHhccC---C------CCCCcccccHHHHHHHHHHhhcChhhCCCH
Confidence            000000000000000          000000011111100   0      000001112368999999999999999999


Q ss_pred             HHHhcCCCcCcCCC
Q psy11727        422 TNVLRHEFFLKHSV  435 (437)
Q Consensus       422 ~e~l~Hp~~~~~~~  435 (437)
                      +|+|+||||++...
T Consensus       320 ~ell~hp~~~~~~~  333 (360)
T 3eqc_A          320 KQLMVHAFIKRSDA  333 (360)
T ss_dssp             HHHHTSHHHHHHHH
T ss_pred             HHHhhChHhhcchH
Confidence            99999999987543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4.7e-48  Score=385.07  Aligned_cols=251  Identities=16%  Similarity=0.199  Sum_probs=196.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEec-------
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLK-------  177 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~-------  177 (437)
                      .++|.+.+.||+|+||+||+|.+..+|+.||||++...    ......+.+|+.+++.+.  .+.|||||+++       
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR--GIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGST--TCCSHHHHHHHHCBCCCS
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhcc--ccCCHHHHHHHhhhhhhh
Confidence            46899999999999999999999899999999999632    222355667776665553  45899999998       


Q ss_pred             ceeeECC-----------------EEEEEEEeccCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhcCCCCCe
Q psy11727        178 GHFTWKN-----------------HLCLVFELLSYNLYNLIRNTNF-----HGVSLNLTKKFAQQLCCALAFLSSPELSI  235 (437)
Q Consensus       178 ~~~~~~~-----------------~~~lV~E~~~~~L~~~l~~~~~-----~~ls~~~~~~i~~qi~~aL~~LH~~~~gi  235 (437)
                      +++.+.+                 ..|+||||++|+|.+++.....     ..+++..++.++.||+.||+|||++  ||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~i  227 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY--GL  227 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT--TE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC--Ce
Confidence            5554443                 3899999998899999876421     1123488888999999999999964  89


Q ss_pred             eeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccccChhhhcCC-----------CCCCcchHHHHHHHHH
Q psy11727        236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI-----------PYDLAIDMWSLGCILV  304 (437)
Q Consensus       236 iHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlG~il~  304 (437)
                      +||||||+|||+  +.++.+||+|||+|...+......+| +.|+|||++.+.           .++.++|||||||++|
T Consensus       228 vHrDikp~NIll--~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          228 VHTYLRPVDIVL--DQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             ECSCCCGGGEEE--CTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEE--cCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            999999999999  67789999999999988777777788 999999999987           8999999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCC
Q psy11727        305 ELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGG  384 (437)
Q Consensus       305 elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (437)
                      ||++|++||.+.+.......+..           .                               ..            
T Consensus       305 elltg~~Pf~~~~~~~~~~~~~~-----------~-------------------------------~~------------  330 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEWIFR-----------S-------------------------------CK------------  330 (377)
T ss_dssp             HHHHSSCCC------CCSGGGGS-----------S-------------------------------CC------------
T ss_pred             HHHHCCCCCcccccccchhhhhh-----------h-------------------------------cc------------
Confidence            99999999976543211111000           0                               00            


Q ss_pred             CCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        385 PGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                               .    ....+.+||.+||+.||.+|||+.|+++||||++.
T Consensus       331 ---------~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          331 ---------N----IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             ---------C----CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             ---------C----CCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence                     0    01257899999999999999999999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=3.5e-46  Score=359.78  Aligned_cols=256  Identities=28%  Similarity=0.452  Sum_probs=206.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++....     .....+..|+.++..+     .|+||+++++++.
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~   76 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-----RHKNVIQLVDVLY   76 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEE
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-----CCCCeeEEEEEEE
Confidence            35689999999999999999999999999999999996432     1234455677666555     7899999999984


Q ss_pred             --ECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        182 --WKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       182 --~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                        +.+..++||||++++|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--~i~H~dlkp~NIl~--~~~~~~kl~d  152 (305)
T 2wtk_C           77 NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ--GIVHKDIKPGNLLL--TTGGTLKISA  152 (305)
T ss_dssp             CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCCEEECC
T ss_pred             cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCcccEEE--cCCCcEEeec
Confidence              55689999999999998888876666799999999999999999999964  89999999999999  6788999999


Q ss_pred             CCCceecCC-----ccccccccccccChhhhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        260 FGSSCHVGQ-----TLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       260 FG~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      ||++.....     ......||+.|+|||++.+..  ++.++|||||||++|+|++|..||.+.+..+....+.......
T Consensus       153 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~  232 (305)
T 2wtk_C          153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI  232 (305)
T ss_dssp             CTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             cccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCC
Confidence            999976532     223456899999999998754  3779999999999999999999999988777666654321000


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +.                                                               .....+.+||.+||+
T Consensus       233 ~~---------------------------------------------------------------~~~~~l~~li~~~l~  249 (305)
T 2wtk_C          233 PG---------------------------------------------------------------DCGPPLSDLLKGMLE  249 (305)
T ss_dssp             CS---------------------------------------------------------------SSCHHHHHHHHHHTC
T ss_pred             CC---------------------------------------------------------------ccCHHHHHHHHHHcc
Confidence            00                                                               001257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .||.+|||++|+++||||++..
T Consensus       250 ~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          250 YEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             SSTTTSCCHHHHHHSHHHHSCC
T ss_pred             CChhhCCCHHHHhcCcccccCC
Confidence            9999999999999999998643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.4e-46  Score=368.63  Aligned_cols=248  Identities=29%  Similarity=0.467  Sum_probs=204.9

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||||++.....         ....+..|+.++..+     .||||+++
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~Iv~~   94 (335)
T 3dls_A           20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-----EHANIIKV   94 (335)
T ss_dssp             THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-----CCTTBCCE
T ss_pred             cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-----CCCCEeeE
Confidence            3467899999999999999999999999999999999975431         223456688888776     68999999


Q ss_pred             cceeeECCEEEEEEEec-cC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        177 KGHFTWKNHLCLVFELL-SY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~-~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      +++|.+.+.+++|||++ .| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.
T Consensus        95 ~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll--~~~~~  168 (335)
T 3dls_A           95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK--DIIHRDIKDENIVI--AEDFT  168 (335)
T ss_dssp             EEEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTSC
T ss_pred             EEEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CeEEeccCHHHEEE--cCCCc
Confidence            99999999999999998 44 7888887653  589999999999999999999964  89999999999999  67889


Q ss_pred             EEEEeCCCceecCCc--cccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        255 IKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       255 ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      +||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.....      .......
T Consensus       169 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~  242 (335)
T 3dls_A          169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIH  242 (335)
T ss_dssp             EEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCC
T ss_pred             EEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccC
Confidence            999999999876433  345679999999999998876 7899999999999999999999975211      0000000


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                                                          .|.                           .....+.+||.+||
T Consensus       243 ------------------------------------~~~---------------------------~~~~~l~~li~~~L  259 (335)
T 3dls_A          243 ------------------------------------PPY---------------------------LVSKELMSLVSGLL  259 (335)
T ss_dssp             ------------------------------------CSS---------------------------CCCHHHHHHHHHHT
T ss_pred             ------------------------------------CCc---------------------------ccCHHHHHHHHHHc
Confidence                                                000                           00125789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +.||.+|||+.++++||||++.
T Consensus       260 ~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          260 QPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CSSGGGSCCHHHHHHCTTTTCC
T ss_pred             cCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=7.5e-46  Score=370.97  Aligned_cols=252  Identities=24%  Similarity=0.373  Sum_probs=200.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+|.+.+.||+|+||+||+|.+.. ++.||||++....   .....+.+|+.++..+.+   .|+||+++++++...+.+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~---~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc---CCCeEEEEEEEEecCCEE
Confidence            469999999999999999998765 8899999996433   223567789999998864   478999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      |+|||+.+++|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  + ++.+||+|||++...
T Consensus       132 ~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~--~ivHrDlkp~NIll--~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          132 YMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLI--V-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT--TCCCCCCCGGGEEE--S-SSCEEECCCSSSCCC
T ss_pred             EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCCHHHEEE--E-CCeEEEEecCccccc
Confidence            9999976779999988754  589999999999999999999964  89999999999999  3 467999999999766


Q ss_pred             CCc-----cccccccccccChhhhcC-----------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh
Q psy11727        267 GQT-----LYQYIQSRYYRSPEVLLG-----------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVL  329 (437)
Q Consensus       267 ~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~  329 (437)
                      ...     ....+||+.|+|||++.+           ..++.++|||||||++|||++|++||.+.... ..+..+....
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~  284 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN  284 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTT
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcc
Confidence            432     234679999999999975           36889999999999999999999999875432 2333222100


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      ..+                                  ..|..                           ....+.+||.+
T Consensus       285 ~~~----------------------------------~~~~~---------------------------~~~~~~~li~~  303 (390)
T 2zmd_A          285 HEI----------------------------------EFPDI---------------------------PEKDLQDVLKC  303 (390)
T ss_dssp             SCC----------------------------------CCCCC---------------------------SCHHHHHHHHH
T ss_pred             ccC----------------------------------CCCcc---------------------------chHHHHHHHHH
Confidence            000                                  00000                           01257899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      ||+.||.+|||+.|+|+||||+..
T Consensus       304 ~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          304 CLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HcccChhhCCCHHHHhhCcCcccc
Confidence            999999999999999999999754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.4e-46  Score=364.88  Aligned_cols=253  Identities=25%  Similarity=0.381  Sum_probs=199.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|++.+.||+|+||+||+|.+ .+++.||||++.....   ....+..|+.++..+.+   +|+||+++++++...++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~~~~~~~~   83 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQY   83 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh---cCCceEEEeeeEeeCCE
Confidence            46799999999999999999987 4688999999974332   23556789999998864   44899999999999999


Q ss_pred             EEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        186 LCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       186 ~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      +++|||+.+++|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||++   ++.+||+|||++..
T Consensus        84 ~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~--~iiHrDikp~NIll~---~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           84 IYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLIV---DGMLKLIDFGIANQ  156 (343)
T ss_dssp             EEEEECCCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEE---TTEEEECCCSSSCC
T ss_pred             EEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCcceEEEE---CCcEEEeecccccc
Confidence            9999998788999999875  3589999999999999999999964  899999999999994   46799999999976


Q ss_pred             cCCc-----cccccccccccChhhhcC-----------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH
Q psy11727        266 VGQT-----LYQYIQSRYYRSPEVLLG-----------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEV  328 (437)
Q Consensus       266 ~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~  328 (437)
                      ....     ....+||+.|+|||++.+           ..++.++|||||||++|+|++|++||.+.... ..+..+.. 
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-  235 (343)
T 3dbq_A          157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-  235 (343)
T ss_dssp             C------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC-
T ss_pred             cCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc-
Confidence            6432     224679999999999964           67889999999999999999999999875432 22222211 


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                        .....                               ..|.                           .....+.+||.
T Consensus       236 --~~~~~-------------------------------~~~~---------------------------~~~~~l~~li~  255 (343)
T 3dbq_A          236 --PNHEI-------------------------------EFPD---------------------------IPEKDLQDVLK  255 (343)
T ss_dssp             --TTSCC-------------------------------CCCC---------------------------CSCHHHHHHHH
T ss_pred             --CCccc-------------------------------CCcc---------------------------cCCHHHHHHHH
Confidence              00000                               0000                           00125789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +||+.||.+|||+.|+|+||||+..
T Consensus       256 ~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          256 CCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHcCCChhHCCCHHHHHhCcccccc
Confidence            9999999999999999999999753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=4.6e-46  Score=375.98  Aligned_cols=259  Identities=31%  Similarity=0.471  Sum_probs=198.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+++.||||++.....         ....+..|+.++..+     .||||+++
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l  205 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKI  205 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-----CCTTBCCC
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-----CCCCEeeE
Confidence            3456889999999999999999999999999999999974321         122466788888887     78999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCC
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~  254 (437)
                      ++++. .+.+++||||+.+ +|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||++.+ ....
T Consensus       206 ~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~--~ivHrDlkp~NIll~~~~~~~~  280 (419)
T 3i6u_A          206 KNFFD-AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN--GIIHRDLKPENVLLSSQEEDCL  280 (419)
T ss_dssp             CEEEE-SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESSSSSSCC
T ss_pred             EEEEe-cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChHhEEEecCCCcce
Confidence            99875 5668999999965 888877654  4589999999999999999999964  89999999999999532 2346


Q ss_pred             EEEEeCCCceecCCc--cccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHH
Q psy11727        255 IKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMT-KIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~-~i~~~  328 (437)
                      +||+|||++......  ....+||+.|+|||++.+   ..|+.++|||||||++|+|++|.+||.+......+. .+...
T Consensus       281 ~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~  360 (419)
T 3i6u_A          281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG  360 (419)
T ss_dssp             EEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTT
T ss_pred             EEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcC
Confidence            999999999876543  245689999999999864   568889999999999999999999998754432222 22211


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ....+...+.                                                           .....+.+||.
T Consensus       361 ~~~~~~~~~~-----------------------------------------------------------~~~~~~~~li~  381 (419)
T 3i6u_A          361 KYNFIPEVWA-----------------------------------------------------------EVSEKALDLVK  381 (419)
T ss_dssp             CCCCCHHHHT-----------------------------------------------------------TSCHHHHHHHH
T ss_pred             CCCCCchhhc-----------------------------------------------------------ccCHHHHHHHH
Confidence            1111110000                                                           00125789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +||++||.+|||++|+|+||||++.
T Consensus       382 ~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          382 KLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             HHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             HHccCChhHCcCHHHHhCCcccCCh
Confidence            9999999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3e-45  Score=351.12  Aligned_cols=255  Identities=23%  Similarity=0.366  Sum_probs=199.7

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE----
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW----  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~----  182 (437)
                      ..|.+.+.||+|+||+||+|.+..++..||+|++.....   ....+..|+.++..+     .||||+++++++..    
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~  100 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEESSS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeeccccCC
Confidence            358999999999999999999999999999999874322   123345566666554     78999999999876    


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      ..++++||||+++ +|.+++...  ..+++..++.++.||+.||.|||+++.+|+||||||+|||++ +.++.+||+|||
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~-~~~~~~kl~Dfg  177 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-GPTGSVKIGDLG  177 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES-STTSCEEECCTT
T ss_pred             CceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE-CCCCCEEEeeCC
Confidence            4679999999955 899998765  358999999999999999999996522399999999999993 267789999999


Q ss_pred             CceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        262 SSCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       262 ~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.............. ..+.....  
T Consensus       178 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~--  253 (290)
T 1t4h_A          178 LATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-VKPASFDK--  253 (290)
T ss_dssp             GGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-CCCGGGGG--
T ss_pred             CcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhcc-CCccccCC--
Confidence            99765433 334678999999998875 58999999999999999999999998855544433222111 01100000  


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                               .....+.+||.+||+.||.+|||
T Consensus       254 ---------------------------------------------------------~~~~~l~~li~~~l~~dp~~Rps  276 (290)
T 1t4h_A          254 ---------------------------------------------------------VAIPEVKEIIEGCIRQNKDERYS  276 (290)
T ss_dssp             ---------------------------------------------------------CCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             ---------------------------------------------------------CCCHHHHHHHHHHccCChhhCCC
Confidence                                                                     00015789999999999999999


Q ss_pred             HHHHhcCCCcCcC
Q psy11727        421 PTNVLRHEFFLKH  433 (437)
Q Consensus       421 ~~e~l~Hp~~~~~  433 (437)
                      ++|+++||||++.
T Consensus       277 ~~ell~h~~f~~~  289 (290)
T 1t4h_A          277 IKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHTSGGGC--
T ss_pred             HHHHhhCcccccC
Confidence            9999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.6e-46  Score=352.29  Aligned_cols=256  Identities=29%  Similarity=0.426  Sum_probs=203.7

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .+....++|.+.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.++..+     .||||++++++
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~   79 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-----RHPHIIKLYQV   79 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEE
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-----CCCCEeEEEEE
Confidence            34556789999999999999999999999999999999986422    2234556677777665     68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +...+..++|||++++ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~~l~  153 (276)
T 2h6d_A           80 ISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLL--DAHMNAKIA  153 (276)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH--CSSCCCCCGGGEEE--CTTSCEEEC
T ss_pred             EecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCChhhEEE--CCCCCEEEe
Confidence            9999999999999965 8999987653  489999999999999999999964  89999999999999  678889999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |||++......  .....|++.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.......+.......|..
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (276)
T 2h6d_A          154 DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY  233 (276)
T ss_dssp             CCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred             ecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchh
Confidence            99999766433  234578999999999988765 589999999999999999999999887766666554321111000


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                     ....+.+||.+||+.||
T Consensus       234 ---------------------------------------------------------------~~~~l~~li~~~l~~~p  250 (276)
T 2h6d_A          234 ---------------------------------------------------------------LNRSVATLLMHMLQVDP  250 (276)
T ss_dssp             ---------------------------------------------------------------SCHHHHHHHHHHTCSSG
T ss_pred             ---------------------------------------------------------------cCHHHHHHHHHHccCCh
Confidence                                                                           00157899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcC
Q psy11727        416 KKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~  433 (437)
                      .+|||+.|+++||||++.
T Consensus       251 ~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          251 LKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             GGSCCHHHHHHSHHHHTT
T ss_pred             hhCCCHHHHHhChhhccC
Confidence            999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.9e-45  Score=351.86  Aligned_cols=252  Identities=25%  Similarity=0.371  Sum_probs=209.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.....    ....+..|+.+++.+     .|+||+++++++.+.+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFEDND   88 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeeeccCC
Confidence            5689999999999999999999999999999999864321    223445566666554     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~kl~dfg~~  162 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN--RVIHRDLKLGNLFL--NEDLEVKIGDFGLA  162 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCCTTC
T ss_pred             EEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CccccCCChHhEEE--cCCCCEEEEeccCc
Confidence            99999999975 8888877653  589999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.+.+..+....+.......|.      
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------  236 (294)
T 2rku_A          163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK------  236 (294)
T ss_dssp             EECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT------
T ss_pred             eecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc------
Confidence            77532   233467899999999999989999999999999999999999999988876665554321100000      


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                               .....+.+||.+||+.||.+|||
T Consensus       237 ---------------------------------------------------------~~~~~~~~li~~~l~~~p~~Rps  259 (294)
T 2rku_A          237 ---------------------------------------------------------HINPVAASLIQKMLQTDPTARPT  259 (294)
T ss_dssp             ---------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ---------------------------------------------------------ccCHHHHHHHHHHcccChhhCcC
Confidence                                                                     00125789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      ++|+++||||+...
T Consensus       260 ~~~ll~~~~~~~~~  273 (294)
T 2rku_A          260 INELLNDEFFTSGY  273 (294)
T ss_dssp             GGGGGGSHHHHTSC
T ss_pred             HHHHhhChheecCC
Confidence            99999999998754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.3e-46  Score=359.35  Aligned_cols=259  Identities=26%  Similarity=0.402  Sum_probs=203.6

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc----hHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----NQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ....+.++|++.+.||+|+||+||+|.+..+++.||||++.......    ..+.+|+.+     ...+.||||++++++
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-----l~~l~hp~iv~~~~~   80 (311)
T 3ork_A            6 TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQN-----AAALNHPAIVAVYDT   80 (311)
T ss_dssp             CCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTT-----CCCCCCTTBCCEEEE
T ss_pred             CcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHH-----HHcCCCCCcceEEEe
Confidence            34567889999999999999999999999999999999997543221    122333333     344589999999999


Q ss_pred             eeECC----EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC
Q psy11727        180 FTWKN----HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       180 ~~~~~----~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~  254 (437)
                      +...+    ..|+||||+++ +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.
T Consensus        81 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~dlkp~Nil~--~~~~~  154 (311)
T 3ork_A           81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN--GIIHRDVKPANIMI--SATNA  154 (311)
T ss_dssp             EEEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--ETTSC
T ss_pred             eeccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CCCcCCCCHHHEEE--cCCCC
Confidence            87654    45999999964 8999887653  589999999999999999999964  89999999999999  56788


Q ss_pred             EEEEeCCCceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      +||+|||++......      .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus       155 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~  234 (311)
T 3ork_A          155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE  234 (311)
T ss_dssp             EEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC
T ss_pred             EEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC
Confidence            999999999765332      22356899999999999999999999999999999999999999998887776666553


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...++.......                                                           ...+.+||.
T Consensus       235 ~~~~~~~~~~~~-----------------------------------------------------------~~~l~~li~  255 (311)
T 3ork_A          235 DPIPPSARHEGL-----------------------------------------------------------SADLDAVVL  255 (311)
T ss_dssp             CCCCHHHHSTTC-----------------------------------------------------------CHHHHHHHH
T ss_pred             CCCCcccccCCC-----------------------------------------------------------CHHHHHHHH
Confidence            333322111000                                                           015789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCc
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      +||+.||.+||++.+++.|+|++.
T Consensus       256 ~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          256 KALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHhcCHhhChhhHHHHHHHHHHH
Confidence            999999999999999999999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1e-45  Score=352.53  Aligned_cols=257  Identities=22%  Similarity=0.288  Sum_probs=200.0

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||||++.....   .......|+..+..+.    .||||+++++++.+
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~----~h~~iv~~~~~~~~   82 (289)
T 1x8b_A            7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG----QHSHVVRYFSAWAE   82 (289)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC----SCTTBCCEEEEEEE
T ss_pred             ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC----CCCCeeeeeeeeec
Confidence            4457889999999999999999999999999999999974322   2234445555555542    78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC---------
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP---------  250 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~---------  250 (437)
                      .+..++||||+++ +|.+++....  ...+++..++.++.||+.||+|||++  ||+||||||+|||++.+         
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM--SLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEC-----------
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC--CEeecCCCHHHEEEcCCCCCcccccc
Confidence            9999999999965 9999887642  24589999999999999999999964  89999999999999432         


Q ss_pred             --------CCCCEEEEeCCCceecCCccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy11727        251 --------KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ  321 (437)
Q Consensus       251 --------~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~  321 (437)
                              ....+||+|||++....... ...||+.|+|||++.+. .++.++|||||||++|+|++|.+|+.....   
T Consensus       161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---  236 (289)
T 1x8b_A          161 GDEDDWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---  236 (289)
T ss_dssp             ---------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred             cccccccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence                    34479999999998776543 35689999999999876 566899999999999999999988765432   


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+...  ..+.                                 .|                           .....
T Consensus       237 ~~~~~~~--~~~~---------------------------------~~---------------------------~~~~~  254 (289)
T 1x8b_A          237 WHEIRQG--RLPR---------------------------------IP---------------------------QVLSQ  254 (289)
T ss_dssp             HHHHHTT--CCCC---------------------------------CS---------------------------SCCCH
T ss_pred             HHHHHcC--CCCC---------------------------------CC---------------------------cccCH
Confidence            2222110  0000                                 00                           00012


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+.+||.+||+.||.+|||+.|+++||||++..
T Consensus       255 ~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          255 EFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            578999999999999999999999999998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3e-45  Score=358.94  Aligned_cols=252  Identities=25%  Similarity=0.372  Sum_probs=210.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+     .|+||+++++++.+.+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~  114 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFEDND  114 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCC
Confidence            568999999999999999999999999999999986432    1223445566666654     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+++||||+.+ +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~--~~~~~~kl~Dfg~~  188 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN--RVIHRDLKLGNLFL--NEDLEVKIGDFGLA  188 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--CTTCCEEECCCTTC
T ss_pred             eEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CCEecCCCchhEEE--cCCCCEEEeeccCc
Confidence            99999999975 888888765  3589999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      .....   ......||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.......+.      
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------  262 (335)
T 2owb_A          189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK------  262 (335)
T ss_dssp             EECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT------
T ss_pred             eecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc------
Confidence            77542   233467899999999999999999999999999999999999999988877666655432110000      


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                               .....+.+||.+||+.||.+|||
T Consensus       263 ---------------------------------------------------------~~~~~~~~li~~~l~~dp~~Rps  285 (335)
T 2owb_A          263 ---------------------------------------------------------HINPVAASLIQKMLQTDPTARPT  285 (335)
T ss_dssp             ---------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ---------------------------------------------------------cCCHHHHHHHHHHccCChhHCcC
Confidence                                                                     00015789999999999999999


Q ss_pred             HHHHhcCCCcCcCC
Q psy11727        421 PTNVLRHEFFLKHS  434 (437)
Q Consensus       421 ~~e~l~Hp~~~~~~  434 (437)
                      +.|+++||||+...
T Consensus       286 ~~ell~~~~~~~~~  299 (335)
T 2owb_A          286 INELLNDEFFTSGY  299 (335)
T ss_dssp             GGGGGGSHHHHTSC
T ss_pred             HHHHhcCccccCCC
Confidence            99999999998754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.1e-45  Score=351.85  Aligned_cols=257  Identities=26%  Similarity=0.410  Sum_probs=206.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++... .....+..|+.++..+     .||||+++++++...+.+
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   99 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-SDLQEIIKEISIMQQC-----DSPHVVKYYGSYFKNTDL   99 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT-SCCHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch-HHHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCCEE
Confidence            3457899999999999999999999999999999999754 3456677788888776     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++.... ..+++..++.++.||+.||.|||+  .||+||||||+||++  +.++.+||+|||++..
T Consensus       100 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dl~p~Nil~--~~~~~~kl~dfg~~~~  174 (314)
T 3com_A          100 WIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF--MRKIHRDIKAGNILL--NTEGHAKLADFGVAGQ  174 (314)
T ss_dssp             EEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTCCEEECCCTTCEE
T ss_pred             EEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCcCHHHEEE--CCCCCEEEeecccchh
Confidence            999999976 8988887443 468999999999999999999995  489999999999999  6778899999999976


Q ss_pred             cCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...  .++....     
T Consensus       175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~-----  247 (314)
T 3com_A          175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTFRK-----  247 (314)
T ss_dssp             CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCCSS-----
T ss_pred             hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCcccCC-----
Confidence            6433   23457899999999999999999999999999999999999999987766554433221  1100000     


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                           .......+.+||.+||+.||.+|||+.
T Consensus       248 -----------------------------------------------------~~~~~~~l~~li~~~l~~dp~~Rpt~~  274 (314)
T 3com_A          248 -----------------------------------------------------PELWSDNFTDFVKQCLVKSPEQRATAT  274 (314)
T ss_dssp             -----------------------------------------------------GGGSCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             -----------------------------------------------------cccCCHHHHHHHHHHccCChhhCcCHH
Confidence                                                                 000012578999999999999999999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++++||||+...
T Consensus       275 ~ll~~~~~~~~~  286 (314)
T 3com_A          275 QLLQHPFVRSAK  286 (314)
T ss_dssp             HHTTSHHHHTCC
T ss_pred             HHHhCHHHhcCC
Confidence            999999998754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=3.2e-45  Score=352.59  Aligned_cols=260  Identities=30%  Similarity=0.458  Sum_probs=207.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ....++|++.+.||+|+||+||+|.+..+++.||+|++.... .....+..|+.++..+     .||||+++++++...+
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   89 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-----DHPYIVKLLGAYYHDG   89 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECC-
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-----CCCCEeeeeeeeeeCC
Confidence            345678999999999999999999999999999999986443 2345667788888776     6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ..++||||+++ +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK--RIIHRDLKAGNVLM--TLEGDIRLADFGVS  164 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEE--CTTSCEEECCCHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC--CcccCCCCHHHEEE--CCCCCEEEEECCCC
Confidence            99999999976 7777776543 4599999999999999999999964  89999999999999  67788999999987


Q ss_pred             eecCC---ccccccccccccChhhh-----cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQ---TLYQYIQSRYYRSPEVL-----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~---~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      .....   ......||..|+|||++     .+..++.++|||||||++|+|++|.+||...+.......+....  ++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~  242 (302)
T 2j7t_A          165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPTL  242 (302)
T ss_dssp             HHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CCCC
T ss_pred             ccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC--Cccc
Confidence            54321   12345789999999998     36678999999999999999999999999988776665554321  1100


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ..+                                                          ......+.+||.+||+.||
T Consensus       243 ~~~----------------------------------------------------------~~~~~~l~~li~~~l~~dp  264 (302)
T 2j7t_A          243 LTP----------------------------------------------------------SKWSVEFRDFLKIALDKNP  264 (302)
T ss_dssp             SSG----------------------------------------------------------GGSCHHHHHHHHHHSCSCT
T ss_pred             CCc----------------------------------------------------------cccCHHHHHHHHHHcccCh
Confidence            000                                                          0001257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCCC
Q psy11727        416 KKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+|||+.++++||||+....
T Consensus       265 ~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          265 ETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             TTSCCHHHHTTSTTTTTCCC
T ss_pred             hhCCCHHHHhcChHHhhhcc
Confidence            99999999999999998654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.3e-45  Score=353.25  Aligned_cols=263  Identities=35%  Similarity=0.489  Sum_probs=213.2

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||+|++....   .....+..|+.++..+     .||||+++++++.+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   92 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILED   92 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----cCCCccEEEEEEeC
Confidence            345689999999999999999999999999999999986432   2234566788877766     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEeC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIIDF  260 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~DF  260 (437)
                      .+..++|||++.+ +|.+.+....  .+++..++.++.||+.||.|||++  ||+||||||+||+++.+. .+.+||+||
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~NIlv~~~~~~~~~kL~Df  168 (287)
T 2wei_A           93 SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH--NIVHRDLKPENILLESKEKDCDIKIIDF  168 (287)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred             CCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCChhhEEEecCCCcccEEEecc
Confidence            9999999999965 8888887653  589999999999999999999964  899999999999995422 457999999


Q ss_pred             CCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      |++......  .....||+.|+|||++.+ .++.++||||||+++|+|++|.+||.+.+..+....+......++...  
T Consensus       169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--  245 (287)
T 2wei_A          169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ--  245 (287)
T ss_dssp             TGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGG--
T ss_pred             CcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchh--
Confidence            998765432  234568899999999876 489999999999999999999999999888777666654211110000  


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                      +.                         .....+.+||.+||+.||.+|
T Consensus       246 --------------------------------~~-------------------------~~~~~~~~li~~~l~~dp~~R  268 (287)
T 2wei_A          246 --------------------------------WR-------------------------TISDDAKDLIRKMLTFHPSLR  268 (287)
T ss_dssp             --------------------------------GT-------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred             --------------------------------hh-------------------------hcCHHHHHHHHHHcccChhhC
Confidence                                            00                         001157899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCCCC
Q psy11727        419 ISPTNVLRHEFFLKHSVDN  437 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~~~  437 (437)
                      ||+.|+|+||||++...++
T Consensus       269 ps~~ell~hp~~~~~~~~e  287 (287)
T 2wei_A          269 ITATQCLEHPWIQKYSSEE  287 (287)
T ss_dssp             CCHHHHHHSHHHHHHCCC-
T ss_pred             cCHHHHhcCHHHhccccCC
Confidence            9999999999999877653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-45  Score=363.84  Aligned_cols=257  Identities=28%  Similarity=0.439  Sum_probs=204.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .++|++.+.||+|+||+||+|++.   .+++.||||+++...     ........|+.++..+.    .|+||+++++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAF  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH----TCTTBCCEEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc----CCCceeEEEEEE
Confidence            478999999999999999999984   589999999986422     22345567888888885    588999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      ...+.+++||||+.+ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kl~D  202 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL--GIIYRDIKLENILL--DSNGHVVLTD  202 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEESC
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCcEEEee
Confidence            999999999999965 8999887653  589999999999999999999964  89999999999999  7788999999


Q ss_pred             CCCceecCCc----cccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCC
Q psy11727        260 FGSSCHVGQT----LYQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL-GMP  332 (437)
Q Consensus       260 FG~s~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~p  332 (437)
                      ||++......    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||...........+.... ...
T Consensus       203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  282 (355)
T 1vzo_A          203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE  282 (355)
T ss_dssp             SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC
T ss_pred             CCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC
Confidence            9999765322    234679999999999986  357899999999999999999999997643222222221110 000


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +.                                 .                           +......+.+||.+||.
T Consensus       283 ~~---------------------------------~---------------------------~~~~~~~~~~li~~~L~  302 (355)
T 1vzo_A          283 PP---------------------------------Y---------------------------PQEMSALAKDLIQRLLM  302 (355)
T ss_dssp             CC---------------------------------C---------------------------CTTSCHHHHHHHHHHTC
T ss_pred             CC---------------------------------C---------------------------CcccCHHHHHHHHHHhh
Confidence            00                                 0                           00001257899999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCcCcCCC
Q psy11727        413 YDPKKRI-----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       413 ~dP~~R~-----t~~e~l~Hp~~~~~~~  435 (437)
                      .||.+||     |++|+++||||++..+
T Consensus       303 ~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          303 KDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             SSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             hCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence            9999999     9999999999998653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.1e-45  Score=349.05  Aligned_cols=255  Identities=24%  Similarity=0.369  Sum_probs=205.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +.++|++.+.||+|+||+||+|.+..+++.||+|++....  .....+..|+.++..+     .|+||+++++++.+.+.
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-----CCCCceeeeeEEEcCCE
Confidence            4678999999999999999999999999999999996433  2234566677777665     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      .++|||++++ +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||++.
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~kl~dfg~~~  153 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI--GITHRDIKPENLLL--DERDNLKISDFGLAT  153 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCChHHEEE--ccCCCEEEeeCCCcc
Confidence            9999999976 888877543  3589999999999999999999964  89999999999999  678889999999997


Q ss_pred             ecCC-----ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhh
Q psy11727        265 HVGQ-----TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVD-QMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       265 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~p~~~~~  337 (437)
                      ....     ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+... ....+.......+    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----  229 (276)
T 2yex_A          154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----  229 (276)
T ss_dssp             ECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST----
T ss_pred             ccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC----
Confidence            6532     1234678999999999988765 678999999999999999999998765432 2222211000000    


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                      ..                         ......+.+||.+||+.||.+
T Consensus       230 --------------------------------~~-------------------------~~~~~~~~~li~~~l~~~p~~  252 (276)
T 2yex_A          230 --------------------------------PW-------------------------KKIDSAPLALLHKILVENPSA  252 (276)
T ss_dssp             --------------------------------TG-------------------------GGSCHHHHHHHHHHSCSSTTT
T ss_pred             --------------------------------ch-------------------------hhcCHHHHHHHHHHCCCCchh
Confidence                                            00                         000125789999999999999


Q ss_pred             CCCHHHHhcCCCcCcCC
Q psy11727        418 RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~  434 (437)
                      |||+.|+++||||++..
T Consensus       253 Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          253 RITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             SCCHHHHTTCTTTTCCC
T ss_pred             CCCHHHHhcCccccChh
Confidence            99999999999998764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-45  Score=356.44  Aligned_cols=277  Identities=20%  Similarity=0.285  Sum_probs=207.8

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .+.++|.+.+.||+|+||+||+|.+..+++.||||++....  .......+|+.++..+     .||||+++++++...+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEETT   80 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECTT
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCcceEEEEeecCC
Confidence            44678999999999999999999999999999999997433  2234566788888877     6899999999998765


Q ss_pred             --EEEEEEEecc-CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--CCCCCEEEE
Q psy11727        185 --HLCLVFELLS-YNLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKII  258 (437)
Q Consensus       185 --~~~lV~E~~~-~~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--~~~~~ikL~  258 (437)
                        +.++||||+. ++|.+++.... ...+++..++.++.||+.||+|||++  ||+||||||+|||+..  +.++.+||+
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (319)
T 4euu_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (319)
T ss_dssp             TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred             CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC--CEecCCCCHHHEEEeccCCCCceEEEc
Confidence              8899999996 58999887643 23489999999999999999999964  8999999999999743  345569999


Q ss_pred             eCCCceecCCc--cccccccccccChhhhc--------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH----HHHHHH
Q psy11727        259 DFGSSCHVGQT--LYQYIQSRYYRSPEVLL--------GIPYDLAIDMWSLGCILVELHTGEPLFSGKNE----VDQMTK  324 (437)
Q Consensus       259 DFG~s~~~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlG~il~elltg~~pf~~~~~----~~~~~~  324 (437)
                      |||++......  .....||+.|+|||++.        +..++.++|||||||++|||++|++||.....    .+.+..
T Consensus       159 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  238 (319)
T 4euu_A          159 DFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK  238 (319)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHH
T ss_pred             cCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHH
Confidence            99999876433  34567899999999986        57889999999999999999999999975332    333444


Q ss_pred             HHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      +...  .|+ ..+.....       .....+....       ..|                     .....+......+.
T Consensus       239 ~~~~--~p~-~~~~~~~~-------~~~~~~~~~~-------~~~---------------------~~~~~~~~~~~~l~  280 (319)
T 4euu_A          239 IITG--KPS-GAISGVQK-------AENGPIDWSG-------DMP---------------------VSCSLSRGLQVLLT  280 (319)
T ss_dssp             HHHH--CCT-TCCEEEEC-------STTCCEEEES-------SCC---------------------TTCSSCHHHHHHHH
T ss_pred             HhcC--CCc-ccchhhhc-------ccCCccccCc-------cCC---------------------cccccchhHHHHhH
Confidence            4332  222 11111100       0000000000       000                     01122344455789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCC
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRHE  428 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~Hp  428 (437)
                      +||++||++||.+|||++|+|+||
T Consensus       281 ~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          281 PVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHHHHhccCChhhhccHHHhhhcc
Confidence            999999999999999999999997

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.8e-45  Score=356.81  Aligned_cols=259  Identities=32%  Similarity=0.456  Sum_probs=202.3

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      ..+.++|.+.+.||+|+||.||+|.+..+++.||||++.....         ....+..|+.++..+     .||||+++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~   80 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKI   80 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-----CCTTBCCE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-----CCCCCceE
Confidence            3456789999999999999999999999999999999864321         123456788888876     68999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCC
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSA  254 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~  254 (437)
                      ++++...+ .++||||+.+ +|.+++...  ..+++..++.++.||+.||.|||++  ||+||||||+|||++.+. .+.
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~dlkp~NIl~~~~~~~~~  155 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN--GIIHRDLKPENVLLSSQEEDCL  155 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSSSCC
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHHHEEEecCCCCCe
Confidence            99987655 8999999965 898888654  4589999999999999999999964  899999999999994322 335


Q ss_pred             EEEEeCCCceecCCcc--ccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Q psy11727        255 IKIIDFGSSCHVGQTL--YQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ-MTKIIEV  328 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~  328 (437)
                      +||+|||++.......  ....||+.|+|||++.   +..++.++|||||||++|+|++|.+||.+...... ...+...
T Consensus       156 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  235 (322)
T 2ycf_A          156 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG  235 (322)
T ss_dssp             EEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT
T ss_pred             EEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC
Confidence            9999999998765432  3467899999999974   56789999999999999999999999987544322 2222221


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ..........                                                           .....+.+||.
T Consensus       236 ~~~~~~~~~~-----------------------------------------------------------~~~~~~~~li~  256 (322)
T 2ycf_A          236 KYNFIPEVWA-----------------------------------------------------------EVSEKALDLVK  256 (322)
T ss_dssp             CCCCCHHHHT-----------------------------------------------------------TSCHHHHHHHH
T ss_pred             ccccCchhhh-----------------------------------------------------------hcCHHHHHHHH
Confidence            1111110000                                                           00125789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +||+.||.+|||+.++|+||||++.
T Consensus       257 ~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          257 KLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHcccCHhhCCCHHHHhhCcCcCCH
Confidence            9999999999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.1e-45  Score=363.23  Aligned_cols=280  Identities=20%  Similarity=0.329  Sum_probs=214.6

Q ss_pred             eecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----c--------------hHHHHHHHHHHHh
Q psy11727        102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----L--------------NQAQIEVQLLEKI  163 (437)
Q Consensus       102 ~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~--------------~~~~~e~~~~~~l  163 (437)
                      ...+..+.++|.+.+.||+|+||.||+|.+  +++.||||++......    .              ..+..|+.++..+
T Consensus        23 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  100 (348)
T 2pml_X           23 VKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI  100 (348)
T ss_dssp             ESSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC
T ss_pred             hhhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC
Confidence            345566789999999999999999999998  8999999998643211    1              6677788887766


Q ss_pred             hhcCCCCCcEEEecceeeECCEEEEEEEeccC-cHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCee
Q psy11727        164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNL------IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSII  236 (437)
Q Consensus       164 ~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~------l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~gii  236 (437)
                           .||||+++++++.+.+..++||||+++ +|.++      +.......+++..++.++.||+.||+|||+. .||+
T Consensus       101 -----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~i~  174 (348)
T 2pml_X          101 -----KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNIC  174 (348)
T ss_dssp             -----CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-SCEE
T ss_pred             -----CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhcc-CCEe
Confidence                 689999999999999999999999976 88887      5554346799999999999999999999961 4899


Q ss_pred             eCCCCCCcEEEecCCCCCEEEEeCCCceecCC-ccccccccccccChhhhcCC-CCCC-cchHHHHHHHHHHHHhCCCCC
Q psy11727        237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-TLYQYIQSRYYRSPEVLLGI-PYDL-AIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       237 HrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlG~il~elltg~~pf  313 (437)
                      ||||||+|||+  +.++.+||+|||++..... ......|+..|+|||++.+. .++. ++|||||||++|+|++|.+||
T Consensus       175 H~dl~p~Nil~--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  252 (348)
T 2pml_X          175 HRDVKPSNILM--DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF  252 (348)
T ss_dssp             CCCCCGGGEEE--CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecCCChHhEEE--cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999  6788999999999987533 34456789999999999887 6666 999999999999999999999


Q ss_pred             CCCCH-HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        314 SGKNE-VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       314 ~~~~~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      .+.+. .+....+.......|..       ...+......          .                           ..
T Consensus       253 ~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~----------~---------------------------~~  288 (348)
T 2pml_X          253 SLKISLVELFNNIRTKNIEYPLD-------RNHFLYPLTN----------K---------------------------KS  288 (348)
T ss_dssp             CCSSCSHHHHHHHTSCCCCCCCS-------SSSSTTTTCC----------------------------------------
T ss_pred             CCCCcHHHHHHHHhccCcCCccc-------hhhhhccccc----------c---------------------------cc
Confidence            98776 55555443211110000       0000000000          0                           00


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ..........+.+||.+||+.||.+|||+.|+++||||++...
T Consensus       289 ~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~  331 (348)
T 2pml_X          289 TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI  331 (348)
T ss_dssp             -----CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCH
T ss_pred             ccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCH
Confidence            0000111226789999999999999999999999999998653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.2e-44  Score=353.78  Aligned_cols=250  Identities=20%  Similarity=0.218  Sum_probs=204.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +.++|++.+.||+|+||+||+|.+..+++.||||++... .....+..|+.+++.+.    .|+||+++++++...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK-SRAPQLHLEYRFYKQLG----SGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT-CSSCCHHHHHHHHHHHC----SCTTSCCEEEEEEETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc-cchHHHHHHHHHHHHhh----CCCCCCEEEEEEecCCccE
Confidence            457899999999999999999999999999999999744 33456888999999885    6789999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC-----EEEEeCCC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-----IKIIDFGS  262 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~-----ikL~DFG~  262 (437)
                      +||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.     +||+|||+
T Consensus        82 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~--~iiHrDlkp~Nill--~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK--NLIYRDVKPENFLI--GRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CCGGGTCTTSEEECCCTT
T ss_pred             EEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeccCCCHHHeee--ccCCCCCCceEEEEEccc
Confidence            999999779999988653 4699999999999999999999964  89999999999999  55555     99999999


Q ss_pred             ceecCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHh
Q psy11727        263 SCHVGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN---EVDQMTKIIEVL  329 (437)
Q Consensus       263 s~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~---~~~~~~~i~~~~  329 (437)
                      +......          .....||+.|+|||++.+..++.++|||||||++|||++|++||.+.+   ..+.+..+....
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~  236 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK  236 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence            9865322          135679999999999999999999999999999999999999998843   334444443321


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      ...+......                                                           ....+.+||.+
T Consensus       237 ~~~~~~~~~~-----------------------------------------------------------~~p~~~~li~~  257 (330)
T 2izr_A          237 RATPIEVLCE-----------------------------------------------------------NFPEMATYLRY  257 (330)
T ss_dssp             HHSCHHHHTT-----------------------------------------------------------TCHHHHHHHHH
T ss_pred             ccCCHHHHhc-----------------------------------------------------------cChHHHHHHHH
Confidence            1111110000                                                           00147899999


Q ss_pred             ccccCCCCCCCHHHHhc
Q psy11727        410 MLTYDPKKRISPTNVLR  426 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~  426 (437)
                      ||+.||.+|||++++++
T Consensus       258 ~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          258 VRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHCCTTCCCCHHHHHH
T ss_pred             HHhCCCCCCCCHHHHHH
Confidence            99999999999998875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.1e-44  Score=343.96  Aligned_cols=253  Identities=19%  Similarity=0.183  Sum_probs=206.0

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +..+.++|++.+.||+|+||+||+|.+..+++.||||++... .....+..|+.+++.+.    .|++++++++++....
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~   79 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLA----GCTGIPNVYYFGQEGL   79 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTT----TCTTCCCEEEEEEETT
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHh----cCCCCCeEEeecCCCc
Confidence            456678999999999999999999999999999999998643 34456778998888875    5788999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC-----EEEEe
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-----IKIID  259 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~-----ikL~D  259 (437)
                      ..++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||++  .++.     +||+|
T Consensus        80 ~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~Dlkp~NIl~~--~~~~~~~~~~kl~D  154 (298)
T 1csn_A           80 HNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK--SLVYRDIKPDNFLIG--RPNSKNANMIYVVD  154 (298)
T ss_dssp             EEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEEC--CSSSTTTTCEEECC
T ss_pred             eeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHEEec--cCCCCCCCeEEEEE
Confidence            999999999889999998654 4599999999999999999999964  899999999999994  4443     99999


Q ss_pred             CCCceecCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHH
Q psy11727        260 FGSSCHVGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK---NEVDQMTKII  326 (437)
Q Consensus       260 FG~s~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~---~~~~~~~~i~  326 (437)
                      ||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.   .....+..+.
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  234 (298)
T 1csn_A          155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG  234 (298)
T ss_dssp             CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHH
T ss_pred             CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHH
Confidence            9999765432          23457899999999999999999999999999999999999999874   3444444444


Q ss_pred             HHhCCCCh-hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        327 EVLGMPPG-YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       327 ~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      .....++. .....                                                           ....+.+
T Consensus       235 ~~~~~~~~~~~~~~-----------------------------------------------------------~~~~l~~  255 (298)
T 1csn_A          235 EKKQSTPLRELCAG-----------------------------------------------------------FPEEFYK  255 (298)
T ss_dssp             HHHHHSCHHHHTTT-----------------------------------------------------------SCHHHHH
T ss_pred             hhccCccHHHHHhh-----------------------------------------------------------CcHHHHH
Confidence            33221111 11000                                                           0015789


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q psy11727        406 LILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~  426 (437)
                      ||.+||+.||.+|||++++++
T Consensus       256 li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHH
Confidence            999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.4e-44  Score=348.52  Aligned_cols=251  Identities=27%  Similarity=0.460  Sum_probs=209.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.|++.+.||+|+||+||+|.+..+++.||||++....  .....+..|+.++..+     .|+||+++++++.+.+.+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   95 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDTKL   95 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCCeE
Confidence            467999999999999999999999999999999997442  2345667788887776     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++..   ..+++..+..++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||++..
T Consensus        96 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~kl~Dfg~~~~  168 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE--KKIHRDIKAANVLL--SEHGEVKLADFGVAGQ  168 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCChheEEE--CCCCCEEEeeccccee
Confidence            999999976 88888765   3589999999999999999999964  89999999999999  6788899999999976


Q ss_pred             cCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        266 VGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       266 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....   .....||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.......+...  .++. .      
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~-~------  239 (303)
T 3a7i_A          169 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN--NPPT-L------  239 (303)
T ss_dssp             CBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCC-C------
T ss_pred             cCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC--CCCC-C------
Confidence            6432   23467899999999999999999999999999999999999999988776655544321  0000 0      


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                +                           ......+.+||.+||+.||.+|||+.
T Consensus       240 --------------------------~---------------------------~~~~~~l~~li~~~l~~dp~~Rps~~  266 (303)
T 3a7i_A          240 --------------------------E---------------------------GNYSKPLKEFVEACLNKEPSFRPTAK  266 (303)
T ss_dssp             --------------------------C---------------------------SSCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             --------------------------c---------------------------cccCHHHHHHHHHHcCCChhhCcCHH
Confidence                                      0                           00012578999999999999999999


Q ss_pred             HHhcCCCcCcC
Q psy11727        423 NVLRHEFFLKH  433 (437)
Q Consensus       423 e~l~Hp~~~~~  433 (437)
                      ++++||||.+.
T Consensus       267 ~ll~~~~~~~~  277 (303)
T 3a7i_A          267 ELLKHKFILRN  277 (303)
T ss_dssp             HHTTCHHHHHH
T ss_pred             HHhhChhhhcC
Confidence            99999999654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.4e-45  Score=361.71  Aligned_cols=262  Identities=27%  Similarity=0.383  Sum_probs=179.6

Q ss_pred             eeccCeeeec-eecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        107 KFLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       107 ~~~~~y~i~~-~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .+.++|.+.+ +||+|+||+||+|.+..+++.||||++....    ....|+......    ..|+||+++++++..   
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~----~~h~~i~~~~~~~~~~~~   96 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQA----SGGPHIVCILDVYENMHH   96 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHH----TTSTTBCCEEEEEEEEET
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHh----cCCCChHHHHHHHhhccC
Confidence            4578999965 6999999999999999999999999997432    233333332222    278999999999986   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEEEe
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIID  259 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL~D  259 (437)
                       ...+++||||+.+ +|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||++.+ ..+.+||+|
T Consensus        97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~--~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A           97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH--NIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCHHHEEEEecCCCceEEEec
Confidence             5579999999966 899999877656799999999999999999999964  89999999999999542 256699999


Q ss_pred             CCCceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        260 FGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       260 FG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.........+......       
T Consensus       175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------  247 (336)
T 3fhr_A          175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL-------  247 (336)
T ss_dssp             CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred             cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc-------
Confidence            9999766433 34567899999999998888999999999999999999999999876544332111110000       


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                    +.+.         ...+.                         +......+.+||.+||+.||.+|
T Consensus       248 --------------~~~~---------~~~~~-------------------------~~~~~~~~~~li~~~L~~dP~~R  279 (336)
T 3fhr_A          248 --------------GQYG---------FPNPE-------------------------WSEVSEDAKQLIRLLLKTDPTER  279 (336)
T ss_dssp             -----------------C---------CCTTT-------------------------STTCCHHHHHHHHHHSCSSGGGS
T ss_pred             --------------cccc---------cCchh-------------------------hccCCHHHHHHHHHHCCCChhHC
Confidence                          0000         00000                         00011267899999999999999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      ||++|+|+||||++.
T Consensus       280 pt~~ell~hp~~~~~  294 (336)
T 3fhr_A          280 LTITQFMNHPWINQS  294 (336)
T ss_dssp             CCHHHHHHSHHHHTG
T ss_pred             cCHHHHhcCcccccc
Confidence            999999999999864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2e-45  Score=353.25  Aligned_cols=256  Identities=30%  Similarity=0.414  Sum_probs=196.2

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----  182 (437)
                      +.++|++.+.||+|+||+||+|.+..+++.||||++.........+..|+.++..+     .||||+++++++.+     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-----NHQYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-----CchHHHHHHHHHHhhcchh
Confidence            46789999999999999999999999999999999975444445566677776655     78999999998865     


Q ss_pred             --------CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        183 --------KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       183 --------~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                              .+.+++||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dlkp~Nil~--~~~~  153 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ--GIIHRDLKPMNIFI--DESR  153 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTS
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC--CeecccCCHHhEEE--cCCC
Confidence                    4678999999965 8999987643 4578899999999999999999964  89999999999999  6788


Q ss_pred             CEEEEeCCCceecCC-----------------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        254 AIKIIDFGSSCHVGQ-----------------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~-----------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      .+||+|||++.....                 ......||+.|+|||++.+. .++.++|||||||++|+|++   ||..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            899999999876532                 12345689999999999865 68999999999999999998   5543


Q ss_pred             C-CHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCC
Q psy11727        316 K-NEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG  394 (437)
Q Consensus       316 ~-~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (437)
                      . +..+....+.......|.                                                           .
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------------~  251 (303)
T 1zy4_A          231 GMERVNILKKLRSVSIEFPP-----------------------------------------------------------D  251 (303)
T ss_dssp             HHHHHHHHHHHHSTTCCCCT-----------------------------------------------------------T
T ss_pred             chhHHHHHHhccccccccCc-----------------------------------------------------------c
Confidence            2 222222222211000000                                                           0


Q ss_pred             CChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       395 ~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .+......+.+||.+||+.||.+|||+.++++||||+....
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          252 FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence            00111125789999999999999999999999999987543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9.6e-45  Score=348.92  Aligned_cols=211  Identities=28%  Similarity=0.380  Sum_probs=176.2

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++.+.++|++.+.||+|+||+||+|.+..+++.||+|++.....    ....+.+|+.++..+     .||||++++++
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~   79 (294)
T 4eqm_A            5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-----SHQNIVSMIDV   79 (294)
T ss_dssp             CSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CBTTBCCEEEE
T ss_pred             hhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-----CCCCCceEEEe
Confidence            356678899999999999999999999999999999999854322    223445566665554     78999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      +.+.+.+++||||++| +|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        80 ~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~Dlkp~Nil~--~~~~~~kl~  153 (294)
T 4eqm_A           80 DEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM--RIVHRDIKPQNILI--DSNKTLKIF  153 (294)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEEC
T ss_pred             eeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCCHHHEEE--CCCCCEEEE
Confidence            9999999999999965 8999987653  589999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy11727        259 DFGSSCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       259 DFG~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i  325 (437)
                      |||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+........
T Consensus       154 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~  224 (294)
T 4eqm_A          154 DFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH  224 (294)
T ss_dssp             CCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH
T ss_pred             eCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            99999765432    23457899999999999999999999999999999999999999998876654444

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.3e-44  Score=344.43  Aligned_cols=256  Identities=25%  Similarity=0.356  Sum_probs=208.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--C
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--K  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~  183 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++.....   ....+..|+.++..+     .||||+++++++.+  .
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEecCCC
Confidence            5789999999999999999999999999999999974322   234456677777776     68999999998854  6


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCC-----eeeCCCCCCcEEEecCCCCCE
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTN--FHGVSLNLTKKFAQQLCCALAFLSSPELS-----IIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~--~~~ls~~~~~~i~~qi~~aL~~LH~~~~g-----iiHrDiKp~NIll~~~~~~~i  255 (437)
                      +.+++||||+++ +|.+++....  ...+++..++.++.||+.||+|||++  |     |+||||||+|||+  +.++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~~~ivH~dl~p~NIl~--~~~~~~  155 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR--SDGGHTVLHRDLKPANVFL--DGKQNV  155 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--C------CCCCCSGGGEEE--CSSSCE
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc--cCCCCeeEEeccchhhEEE--cCCCCE
Confidence            799999999975 8999886532  24489999999999999999999964  6     9999999999999  678889


Q ss_pred             EEEeCCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        256 KIIDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       256 kL~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      ||+|||++......   .....|+..|+|||++.+..++.++||||||+++|+|++|.+||.+.+..+....+......+
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~  235 (279)
T 2w5a_A          156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR  235 (279)
T ss_dssp             EECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             EEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc
Confidence            99999999765433   234578999999999999999999999999999999999999999988776666654421100


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      .                                   |                           ......+.+||.+||+
T Consensus       236 ~-----------------------------------~---------------------------~~~~~~l~~li~~~l~  253 (279)
T 2w5a_A          236 I-----------------------------------P---------------------------YRYSDELNEIITRMLN  253 (279)
T ss_dssp             C-----------------------------------C---------------------------TTSCHHHHHHHHHHTC
T ss_pred             C-----------------------------------C---------------------------cccCHHHHHHHHHHcC
Confidence            0                                   0                           0001257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      .||.+|||+.|+++|||+++...
T Consensus       254 ~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          254 LKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             SSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             CCcccCCCHHHHHhChhhhhhcc
Confidence            99999999999999999998654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.7e-45  Score=354.26  Aligned_cols=267  Identities=27%  Similarity=0.406  Sum_probs=186.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ...++|++.+.||+|+||+||+|.+..+++.||||++....  .....+..|+.++     ..+.||||+++++++...+
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-----~~l~h~~i~~~~~~~~~~~   86 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAM-----SQCHHPNIVSYYTSFVVKD   86 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CC-----CCCCCTTBCCEEEEEESSS
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHH-----hhcCCCCEeeEEEEEeecC
Confidence            33578999999999999999999998899999999986432  1122333444433     3457999999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        185 HLCLVFELLS-YNLYNLIRNT------NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~------~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      ..++||||++ ++|.+++...      ....+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dl~p~Nil~--~~~~~~kl  162 (303)
T 2vwi_A           87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN--GQIHRDVKAGNILL--GEDGSVQI  162 (303)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEE--CTTCCEEE
T ss_pred             CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC--CCCCCCCChhhEEE--cCCCCEEE
Confidence            9999999995 4898888641      234589999999999999999999964  89999999999999  67888999


Q ss_pred             EeCCCceecCCc--------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        258 IDFGSSCHVGQT--------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       258 ~DFG~s~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      +|||++......        .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  242 (303)
T 2vwi_A          163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN  242 (303)
T ss_dssp             CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS
T ss_pred             EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc
Confidence            999998654321        234578999999999976 56899999999999999999999999887765444332211


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                        .++... . .         ..                                        .+.........+.+||.
T Consensus       243 --~~~~~~-~-~---------~~----------------------------------------~~~~~~~~~~~~~~li~  269 (303)
T 2vwi_A          243 --DPPSLE-T-G---------VQ----------------------------------------DKEMLKKYGKSFRKMIS  269 (303)
T ss_dssp             --SCCCTT-C-------------------------------------------------------CCCCCCCHHHHHHHH
T ss_pred             --CCCccc-c-c---------cc----------------------------------------cchhhhhhhHHHHHHHH
Confidence              110000 0 0         00                                        00000000125789999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcCCC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +||+.||.+|||+.++++||||++...
T Consensus       270 ~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          270 LCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             HHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             HHccCChhhCcCHHHHhhChhhhcCCC
Confidence            999999999999999999999987643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=7.2e-45  Score=354.02  Aligned_cols=255  Identities=26%  Similarity=0.408  Sum_probs=206.7

Q ss_pred             ecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEE
Q psy11727        103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVK  175 (437)
Q Consensus       103 ~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~  175 (437)
                      ..++.+.++|++.+.||+|+||+||+|.+..+++.||||++.....       ....+..|+.+++.+.+   .|+||++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~i~~  112 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIR  112 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCC
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc---CCCCceE
Confidence            3455678899999999999999999999999999999999974321       12455678999988864   5789999


Q ss_pred             ecceeeECCEEEEEEEecc--CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCC
Q psy11727        176 LKGHFTWKNHLCLVFELLS--YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       176 l~~~~~~~~~~~lV~E~~~--~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~  253 (437)
                      +++++...+..++|||++.  ++|.+++...  ..+++..++.++.||+.||+|||+  .||+||||||+|||++ .+++
T Consensus       113 ~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll~-~~~~  187 (320)
T 3a99_A          113 LLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHN--CGVLHRDIKDENILID-LNRG  187 (320)
T ss_dssp             EEEEEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEEE-TTTT
T ss_pred             EEEEEecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCcEeCCCCHHHEEEe-CCCC
Confidence            9999999999999999995  5899988765  358999999999999999999995  4899999999999994 2567


Q ss_pred             CEEEEeCCCceecCCc-cccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        254 AIKIIDFGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      .+||+|||++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...+.      +...  .
T Consensus       188 ~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~--~  259 (320)
T 3a99_A          188 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG--Q  259 (320)
T ss_dssp             EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC--C
T ss_pred             CEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhcc--c
Confidence            8999999999876543 334678999999999987665 6789999999999999999999975321      1110  0


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ..             +                     +                       .    .....+.+||.+||
T Consensus       260 ~~-------------~---------------------~-----------------------~----~~~~~~~~li~~~l  278 (320)
T 3a99_A          260 VF-------------F---------------------R-----------------------Q----RVSSECQHLIRWCL  278 (320)
T ss_dssp             CC-------------C---------------------S-----------------------S----CCCHHHHHHHHHHT
T ss_pred             cc-------------c---------------------c-----------------------c----cCCHHHHHHHHHHc
Confidence            00             0                     0                       0    00025789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        412 TYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +.||.+|||++|+++||||++..
T Consensus       279 ~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          279 ALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             CSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             cCChhhCcCHHHHhcCHhhcCcc
Confidence            99999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.5e-44  Score=340.91  Aligned_cols=246  Identities=22%  Similarity=0.312  Sum_probs=205.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+. ++..||+|++.........+.+|+.+++.+     .||||+++++++.+.+..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCceEE
Confidence            468999999999999999999986 467899999986655566788898888877     68999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.... ..+++..++.++.||+.||+|||+  .||+||||||+||++  +.++.+||+|||++....
T Consensus        83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~--~~i~H~dikp~Nil~--~~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLV--GENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEE--CGGGCEEECCTTGGGGBC
T ss_pred             EEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHh--CCeecCCcchheEEE--cCCCCEEecccccccccc
Confidence            9999965 7888887654 468999999999999999999995  489999999999999  667889999999997664


Q ss_pred             Ccc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    ....+|..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+...       
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------  230 (269)
T 4hcu_A          158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR-------  230 (269)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT-------
T ss_pred             ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCC-------
Confidence            332    23455678999999998899999999999999999999 999999988877776664421111000       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||.+|||+.
T Consensus       231 -------------------------------------------------------~~~~~~~~li~~~l~~~p~~Rps~~  255 (269)
T 4hcu_A          231 -------------------------------------------------------LASTHVYQIMNHCWRERPEDRPAFS  255 (269)
T ss_dssp             -------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             -------------------------------------------------------cCCHHHHHHHHHHccCCcccCcCHH
Confidence                                                                   0012578999999999999999999


Q ss_pred             HHhcC
Q psy11727        423 NVLRH  427 (437)
Q Consensus       423 e~l~H  427 (437)
                      ++++|
T Consensus       256 ~ll~~  260 (269)
T 4hcu_A          256 RLLRQ  260 (269)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=8e-44  Score=352.77  Aligned_cols=203  Identities=13%  Similarity=0.192  Sum_probs=170.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-----CeEEEEEEecCCcccchHHHHHHHHHHHhh----------hcCCCCCcE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-----KCQVAIKIIKNKKPFLNQAQIEVQLLEKIN----------KADIHSRYI  173 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-----~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~----------~~~~~h~~i  173 (437)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||++....   .....|+.+++.+.          ...+.|+||
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            45899999999999999999998765     5789999987543   34555666665553          356789999


Q ss_pred             EEecceeeEC----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        174 VKLKGHFTWK----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       174 v~l~~~~~~~----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      +++++++...    .+.||||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||++.
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~--~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH--EYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEES
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeEEecCCHHHEEEec
Confidence            9999998875    5789999999779999987753 5699999999999999999999964  8999999999999964


Q ss_pred             CCCCCEEEEeCCCceecCCcc----------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        250 PKRSAIKIIDFGSSCHVGQTL----------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.++.+||+|||++.......          ....||+.|+|||++.+..++.++|||||||++|||++|++||.+..
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            478899999999997653221          23459999999999999999999999999999999999999998643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=5.5e-44  Score=346.18  Aligned_cols=269  Identities=23%  Similarity=0.343  Sum_probs=203.0

Q ss_pred             CCCCCcceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCC
Q psy11727         94 DDENYDYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHS  170 (437)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h  170 (437)
                      +....++.+.......++|.+.+.||+|+||.||+|.+. +++.||||++....   .....+..|+.++..+.+   .|
T Consensus        12 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~   87 (313)
T 3cek_A           12 DLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HS   87 (313)
T ss_dssp             --------CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG---GC
T ss_pred             cCCCCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc---cC
Confidence            333344445555555678999999999999999999875 58899999996432   233566789999988864   46


Q ss_pred             CcEEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        171 RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       171 ~~iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      +||+++++++...+.+++|||+.+++|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+.  
T Consensus        88 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~~--  161 (313)
T 3cek_A           88 DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH--GIVHSDLKPANFLIV--  161 (313)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEE--
T ss_pred             CceEEEEEEeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CceecCCCcccEEEE--
Confidence            89999999999999999999977789999998753  589999999999999999999964  899999999999994  


Q ss_pred             CCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcC-----------CCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        251 KRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLG-----------IPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                       ++.+||+|||++.......     ....||+.|+|||++.+           ..++.++|||||||++|+|++|..||.
T Consensus       162 -~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  240 (313)
T 3cek_A          162 -DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ  240 (313)
T ss_dssp             -TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchh
Confidence             3789999999997654322     24578999999999976           468889999999999999999999998


Q ss_pred             CCCHH-HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCC
Q psy11727        315 GKNEV-DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP  393 (437)
Q Consensus       315 ~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (437)
                      ..... ..+..+......+                                  ..|.                       
T Consensus       241 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~~-----------------------  263 (313)
T 3cek_A          241 QIINQISKLHAIIDPNHEI----------------------------------EFPD-----------------------  263 (313)
T ss_dssp             TCCSHHHHHHHHHCTTSCC----------------------------------CCCC-----------------------
T ss_pred             hHHHHHHHHHHHHhccccc----------------------------------CCcc-----------------------
Confidence            75432 2222221100000                                  0000                       


Q ss_pred             CCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       394 ~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                          .....+.+||.+||+.||.+|||+.|+++||||+...
T Consensus       264 ----~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          264 ----IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             ----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             ----cchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence                0012578999999999999999999999999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.4e-43  Score=343.44  Aligned_cols=254  Identities=25%  Similarity=0.301  Sum_probs=197.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ...++|++.+.||+|+||+||+|.+  ++..||||++.....   ....+.+|+.++..+     .||||+++++++.+.
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-----RHPNIVLFMGAVTQP  106 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECST
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEC
Confidence            3467899999999999999999976  678999999975432   223566788888777     689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPELS--IIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~~g--iiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      +.+++||||+.+ +|.+++..... ..+++..++.++.||+.||+|||++  |  |+||||||+|||+  +.++.+||+|
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~~~ivH~Dikp~NIll--~~~~~~kL~D  182 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR--NPPIVHRNLKSPNLLV--DKKYTVKVCD  182 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS--SSCCCCTTCCGGGEEE--CTTCCEEECC
T ss_pred             CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC--CCCEECCCCChhhEEE--eCCCcEEECC
Confidence            999999999965 89998876431 2389999999999999999999965  7  9999999999999  6788999999


Q ss_pred             CCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        260 FGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       260 FG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+......++   
T Consensus       183 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~---  259 (309)
T 3p86_A          183 FGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE---  259 (309)
T ss_dssp             CC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC---
T ss_pred             CCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC---
Confidence            9999755433   3346789999999999999999999999999999999999999999887766655532111000   


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                     .|                           ......+.+||.+||+.||.
T Consensus       260 -------------------------------~~---------------------------~~~~~~l~~li~~~l~~dP~  281 (309)
T 3p86_A          260 -------------------------------IP---------------------------RNLNPQVAAIIEGCWTNEPW  281 (309)
T ss_dssp             -------------------------------CC---------------------------TTSCHHHHHHHHHHTCSSGG
T ss_pred             -------------------------------CC---------------------------ccCCHHHHHHHHHHccCChh
Confidence                                           00                           00012578999999999999


Q ss_pred             CCCCHHHHhc--CCCcCc
Q psy11727        417 KRISPTNVLR--HEFFLK  432 (437)
Q Consensus       417 ~R~t~~e~l~--Hp~~~~  432 (437)
                      +|||+.++++  +++++.
T Consensus       282 ~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          282 KRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             GSCCHHHHHHHHHHHHC-
T ss_pred             hCcCHHHHHHHHHHHHHh
Confidence            9999999987  555543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.7e-44  Score=349.71  Aligned_cols=260  Identities=22%  Similarity=0.332  Sum_probs=186.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCe---EEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC---QVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ....++|++.+.||+|+||+||+|.+..++.   .||||+++...   .....+.+|+.++..+     .||||++++++
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~   93 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-----DHPHVAKLVGV   93 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-----CCTTBCCCCEE
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-----CCCceehhhce
Confidence            3446789999999999999999999877765   89999997432   2234555676666655     78999999999


Q ss_pred             eeECCEE------EEEEEeccC-cHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        180 FTWKNHL------CLVFELLSY-NLYNLIRNTNF----HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       180 ~~~~~~~------~lV~E~~~~-~L~~~l~~~~~----~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                      +...+..      ++||||+.+ +|.+++.....    ..+++..++.++.||+.||+|||++  ||+||||||+|||+ 
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--~ivH~Dikp~NIli-  170 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR--NFIHRDLAARNCML-  170 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE-
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC--CcccCCCCcceEEE-
Confidence            9877655      999999965 89988865321    2489999999999999999999964  89999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQM  322 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~  322 (437)
                       +.++.+||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+..
T Consensus       171 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~  249 (323)
T 3qup_A          171 -AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY  249 (323)
T ss_dssp             -CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             -cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH
Confidence             678899999999997653322     22345778999999999999999999999999999999 99999998877666


Q ss_pred             HHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhH
Q psy11727        323 TKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMK  402 (437)
Q Consensus       323 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (437)
                      ..+......+..                                                              ......
T Consensus       250 ~~~~~~~~~~~~--------------------------------------------------------------~~~~~~  267 (323)
T 3qup_A          250 NYLIGGNRLKQP--------------------------------------------------------------PECMEE  267 (323)
T ss_dssp             HHHHTTCCCCCC--------------------------------------------------------------TTCCHH
T ss_pred             HHHhcCCCCCCC--------------------------------------------------------------CccCHH
Confidence            655432110000                                                              000125


Q ss_pred             HHHHHHHccccCCCCCCC-------HHHHhcCCCcCcCCCC
Q psy11727        403 FKDLILRMLTYDPKKRIS-------PTNVLRHEFFLKHSVD  436 (437)
Q Consensus       403 ~~dli~~~L~~dP~~R~t-------~~e~l~Hp~~~~~~~~  436 (437)
                      +.+||.+||+.||.+|||       .++++.|||+.....+
T Consensus       268 l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~  308 (323)
T 3qup_A          268 VYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQD  308 (323)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---------
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCC
Confidence            789999999999999999       8889999999876543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=7e-44  Score=361.21  Aligned_cols=254  Identities=24%  Similarity=0.301  Sum_probs=194.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+|.+.++||+|+||+||.. ...+++.||||++....  .....+|+.+++.+.    .|||||++++++.+.+.+|+|
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~----~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPEC--FSFADREVQLLRESD----EHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTT--EEECHHHHHHHHHSC----CCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHH--HHHHHHHHHHHHhcc----CCCCcCeEEEEEecCCEEEEE
Confidence            36999999999999997643 45678999999996432  344567888888763    689999999999999999999


Q ss_pred             EEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec---CCCCCEEEEeCCCceec
Q psy11727        190 FELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       190 ~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~---~~~~~ikL~DFG~s~~~  266 (437)
                      ||+++++|.+++..... .+++..+..++.||+.||+|||++  ||+||||||+|||++.   +....+||+|||+|...
T Consensus        97 ~E~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A           97 IELCAATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             EECCSEEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT--TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             EECCCCCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC--cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            99999999999987653 355666789999999999999964  8999999999999943   23346889999999766


Q ss_pred             CC------ccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        267 GQ------TLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       267 ~~------~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ..      .....+||+.|+|||++.   +..++.++|||||||++|||++ |.+||........ ..+   .+......
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~~~---~~~~~~~~  249 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-NIL---LGACSLDC  249 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-HHH---TTCCCCTT
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-HHH---hccCCccc
Confidence            42      233467999999999998   4567889999999999999999 9999976544322 111   11000000


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                              ..........+.+||.+||+.||.
T Consensus       250 --------------------------------------------------------~~~~~~~~~~~~~li~~~L~~dP~  273 (432)
T 3p23_A          250 --------------------------------------------------------LHPEKHEDVIARELIEKMIAMDPQ  273 (432)
T ss_dssp             --------------------------------------------------------SCTTCHHHHHHHHHHHHHSCSSGG
T ss_pred             --------------------------------------------------------cCccccccHHHHHHHHHHHhCCHh
Confidence                                                                    000011122578999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.|+++||||...
T Consensus       274 ~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          274 KRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             GSCCHHHHHTSTTTCCH
T ss_pred             hCCCHHHHHhCccccCh
Confidence            99999999999999753

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.4e-43  Score=339.76  Aligned_cols=256  Identities=26%  Similarity=0.432  Sum_probs=198.1

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      +|....+||+|+||+||+|.+..+++.||||++.... .....+..|+.++..+     .||||+++++++...+..++|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv   97 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-----KHKNIVQYLGSFSENGFIKIF   97 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-----CCCCEeeEeeEEEeCCcEEEE
Confidence            3444558999999999999999999999999997543 2345566788777766     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        190 FELLSY-NLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||++++ +|.+++.... ...+++..++.++.||+.||.|||++  ||+||||||+||+++. .++.+||+|||++....
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dl~p~Nil~~~-~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEET-TTCCEEECCTTTCEESC
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC--CEEccCCChhhEEEEC-CCCCEEEeecccccccC
Confidence            999964 8988887643 23467899999999999999999964  8999999999999942 36789999999997764


Q ss_pred             Cc---cccccccccccChhhhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..   .....|++.|+|||++.+..  ++.++|||||||++|+|++|+.||...................+.        
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------  246 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE--------  246 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC--------
T ss_pred             CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc--------
Confidence            32   23457899999999997643  889999999999999999999999765433221111111111100        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                               .|                           ......+.+||.+||+.||.+|||+.
T Consensus       247 -------------------------~~---------------------------~~~~~~~~~li~~~l~~dp~~Rps~~  274 (295)
T 2clq_A          247 -------------------------IP---------------------------ESMSAEAKAFILKCFEPDPDKRACAN  274 (295)
T ss_dssp             -------------------------CC---------------------------TTSCHHHHHHHHHTTCSSTTTSCCHH
T ss_pred             -------------------------cc---------------------------ccCCHHHHHHHHHHccCChhhCCCHH
Confidence                                     00                           00012578999999999999999999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      ++|+||||+...
T Consensus       275 ~ll~~~~~~~~~  286 (295)
T 2clq_A          275 DLLVDEFLKVSS  286 (295)
T ss_dssp             HHHTSGGGCC--
T ss_pred             HHhcChhhhhcc
Confidence            999999998654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=7.6e-44  Score=345.24  Aligned_cols=257  Identities=27%  Similarity=0.384  Sum_probs=185.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccch--HHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLN--QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||++........  +...|...    ......||||+++++++...+.+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~----~~~~~~h~~i~~~~~~~~~~~~~   99 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV----VLKSHDCPYIVQCFGTFITNTDV   99 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHH----HHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHH----HHHhcCCCceeeEEEEEecCCcE
Confidence            5789999999999999999999999999999999975432111  11112211    12234899999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++||||+++.+..+.... ...+++..++.++.||+.||.|||++ .||+||||||+|||+  +.++.+||+|||++...
T Consensus       100 ~lv~e~~~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dlkp~Nil~--~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          100 FIAMELMGTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILL--DERGQIKLCDFGISGRL  175 (318)
T ss_dssp             EEEECCCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCGGGEEE--CTTSCEEECCCTTC---
T ss_pred             EEEEeccCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhh-CCEEeCCCCHHHEEE--CCCCCEEEEECCCchhc
Confidence            999999965555555443 35689999999999999999999952 279999999999999  67889999999999765


Q ss_pred             CCc--cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhhhc
Q psy11727        267 GQT--LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGK-NEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       267 ~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ...  .....||+.|+|||++.     +..++.++|||||||++|+|++|+.||... ...+.+..+....  ++.    
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~----  249 (318)
T 2dyl_A          176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE--PPL----  249 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC--CCC----
T ss_pred             cCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC--CCC----
Confidence            332  23457899999999995     457889999999999999999999999874 4444444443311  100    


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                   .|...                         .....+.+||.+||+.||.+|
T Consensus       250 -----------------------------~~~~~-------------------------~~~~~l~~li~~~l~~dp~~R  275 (318)
T 2dyl_A          250 -----------------------------LPGHM-------------------------GFSGDFQSFVKDCLTKDHRKR  275 (318)
T ss_dssp             -----------------------------CCSSS-------------------------CCCHHHHHHHHHHTCSCTTTS
T ss_pred             -----------------------------CCccC-------------------------CCCHHHHHHHHHHccCChhHC
Confidence                                         00000                         001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcC
Q psy11727        419 ISPTNVLRHEFFLKH  433 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~  433 (437)
                      ||+.++++||||++.
T Consensus       276 ps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          276 PKYNKLLEHSFIKRY  290 (318)
T ss_dssp             CCHHHHTTSHHHHHH
T ss_pred             cCHHHHhhCHHHHhc
Confidence            999999999999764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=9.8e-44  Score=336.47  Aligned_cols=246  Identities=22%  Similarity=0.298  Sum_probs=205.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+. ++..||+|++.........+..|+.++..+     .||||+++++++.+.+..++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-----SHPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCceEE
Confidence            578999999999999999999775 567899999986665566788899988887     58999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++....
T Consensus        81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nil~--~~~~~~~l~Dfg~~~~~~  155 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH--QFIHRDLAARNCLV--DRDLCVKVSDFGMTRYVL  155 (268)
T ss_dssp             EEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT--TEEESSCSGGGEEE--CTTCCEEECCTTCEEECC
T ss_pred             EEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCcCcceEEE--CCCCCEEEccCccceecc
Confidence            9999965 7999887653 3589999999999999999999964  89999999999999  678899999999997664


Q ss_pred             Cccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ....    ...+|..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+..+....+......+...       
T Consensus       156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------  228 (268)
T 3sxs_A          156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH-------  228 (268)
T ss_dssp             TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT-------
T ss_pred             hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCC-------
Confidence            3322    2345667999999999899999999999999999999 999999988877666654321111000       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||.+|||+.
T Consensus       229 -------------------------------------------------------~~~~~l~~li~~~l~~~p~~Rps~~  253 (268)
T 3sxs_A          229 -------------------------------------------------------LASDTIYQIMYSCWHELPEKRPTFQ  253 (268)
T ss_dssp             -------------------------------------------------------TSCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             -------------------------------------------------------cChHHHHHHHHHHcCCChhhCcCHH
Confidence                                                                   0012578999999999999999999


Q ss_pred             HHhcC
Q psy11727        423 NVLRH  427 (437)
Q Consensus       423 e~l~H  427 (437)
                      ++++|
T Consensus       254 ~ll~~  258 (268)
T 3sxs_A          254 QLLSS  258 (268)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=357.67  Aligned_cols=256  Identities=20%  Similarity=0.246  Sum_probs=204.3

Q ss_pred             eeccCeeeeceecccCceEEEEEE-----EcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ...++|.+.+.||+|+||+||+|.     +..+++.||||+++...  .....+.+|+.++..+     .||||++++++
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~  142 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQNIVRCIGV  142 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-----CCCCCCeEEEE
Confidence            345789999999999999999999     45678899999996432  2223456677777776     78999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CC
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNF-----HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KR  252 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~-----~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~  252 (437)
                      +...+..++||||+.+ +|.+++.....     ..+++..++.++.||+.||+|||++  ||+||||||+|||++.+ ..
T Consensus       143 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~~~~  220 (367)
T 3l9p_A          143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--HFIHRDIAARNCLLTCPGPG  220 (367)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTT
T ss_pred             EecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChhhEEEecCCCC
Confidence            9999999999999955 89999876532     3489999999999999999999964  89999999999999422 23


Q ss_pred             CCEEEEeCCCceecC-----CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        253 SAIKIIDFGSSCHVG-----QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      ..+||+|||++....     .......||+.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+.
T Consensus       221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~  300 (367)
T 3l9p_A          221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  300 (367)
T ss_dssp             CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             ceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            459999999996542     22234567889999999999999999999999999999998 999999998877776664


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .....++..                                                              .....+.+|
T Consensus       301 ~~~~~~~~~--------------------------------------------------------------~~~~~l~~l  318 (367)
T 3l9p_A          301 SGGRMDPPK--------------------------------------------------------------NCPGPVYRI  318 (367)
T ss_dssp             TTCCCCCCT--------------------------------------------------------------TCCHHHHHH
T ss_pred             cCCCCCCCc--------------------------------------------------------------cCCHHHHHH
Confidence            422111100                                                              001157899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~  431 (437)
                      |.+||+.||.+|||+.++++|.++.
T Consensus       319 i~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          319 MTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999987653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=7.5e-44  Score=339.96  Aligned_cols=246  Identities=21%  Similarity=0.289  Sum_probs=203.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+. ++..||+|++.........+..|+.++..+     .|+||+++++++.+.+..++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcC-----CCCCEeeEEEEEecCCCeEE
Confidence            568999999999999999999875 677899999986655566778888888876     68999999999999999999


Q ss_pred             EEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+. ++|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||++....
T Consensus        97 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nili--~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLAARNCLV--NDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             EECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCSGGGEEE--CTTSCEEECSTTGGGGBC
T ss_pred             EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC--CccCCCCccceEEE--cCCCCEEEcccccccccc
Confidence            999995 58999887643 4599999999999999999999964  89999999999999  678899999999997664


Q ss_pred             Ccc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    ....+|+.|+|||++.+..++.++||||||+++|+|++ |++||.+.+..+....+......+....      
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------  245 (283)
T 3gen_A          172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL------  245 (283)
T ss_dssp             CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTT------
T ss_pred             ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCc------
Confidence            332    22345678999999998899999999999999999998 9999999888777776654321111000      


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                              ....+.+||.+||+.||.+|||++
T Consensus       246 --------------------------------------------------------~~~~l~~li~~~l~~~p~~Rps~~  269 (283)
T 3gen_A          246 --------------------------------------------------------ASEKVYTIMYSCWHEKADERPTFK  269 (283)
T ss_dssp             --------------------------------------------------------CCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             --------------------------------------------------------CCHHHHHHHHHHccCChhHCcCHH
Confidence                                                                    012578999999999999999999


Q ss_pred             HHhcC
Q psy11727        423 NVLRH  427 (437)
Q Consensus       423 e~l~H  427 (437)
                      ++++|
T Consensus       270 ~ll~~  274 (283)
T 3gen_A          270 ILLSN  274 (283)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=7.6e-44  Score=353.95  Aligned_cols=249  Identities=24%  Similarity=0.355  Sum_probs=201.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-------CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|.+.+.||+|+||+||+|.+.       .++..||||+++....  ....+..|+.++..+.    .||||++++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~~~  155 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA  155 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC----CCTTBCCEEEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc----CCCCEeeEEEE
Confidence            578999999999999999999874       3566899999975422  2345667888887763    68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      |...+.+|+||||+++ +|.+++.....              ..+++..+..++.||+.||+|||++  ||+||||||+|
T Consensus       156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~N  233 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--KCIHRDLAARN  233 (370)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGG
T ss_pred             EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--Ceeccccchhh
Confidence            9999999999999965 89999876431              3489999999999999999999964  89999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|||++ |.+||.+.+.
T Consensus       234 Ill--~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~  311 (370)
T 2psq_A          234 VLV--TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  311 (370)
T ss_dssp             EEE--CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             EEE--CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            999  77889999999999866432     223456788999999999999999999999999999999 9999998876


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+......+.                                   |                           ..
T Consensus       312 ~~~~~~~~~~~~~~~-----------------------------------~---------------------------~~  329 (370)
T 2psq_A          312 EELFKLLKEGHRMDK-----------------------------------P---------------------------AN  329 (370)
T ss_dssp             GGHHHHHHTTCCCCC-----------------------------------C---------------------------TT
T ss_pred             HHHHHHHhcCCCCCC-----------------------------------C---------------------------CC
Confidence            665554432111000                                   0                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||+.||.+|||+.|++++
T Consensus       330 ~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          330 CTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            01257899999999999999999999864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=6e-43  Score=335.49  Aligned_cols=203  Identities=26%  Similarity=0.327  Sum_probs=172.3

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++... .....+..|+.++..+.+.    +++..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~~~----~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQGG----VGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESC-SSCCHHHHHHHHHHHHTTS----TTCCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC-cchhHHHHHHHHHHHhhcC----CCCCccccccCCCCce
Confidence            4568999999999999999999999999999999998743 3446788899999998643    3444555556788899


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~s~~  265 (437)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||++. +.++.+||+|||++..
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC--CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            9999999889999987543 4699999999999999999999964  8999999999999931 2567899999999976


Q ss_pred             cCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        266 VGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       266 ~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      ....          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 3uzp_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence            5432          234578999999999999999999999999999999999999998743

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=3.1e-43  Score=356.90  Aligned_cols=259  Identities=27%  Similarity=0.357  Sum_probs=194.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.+.|.+.+.||+|+||+||.+. ..+|+.||||++...  .......|+.++..+.    .|||||++++++.+.+.+
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~----~HpnIv~~~~~~~~~~~~   84 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID--FCDIALMEIKLLTESD----DHPNVIRYYCSETTDRFL   84 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHT----TSTTBCCEEEEEECSSEE
T ss_pred             hhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH--HHHHHHHHHHHHHhcc----CCCCcCeEEEEEecCCeE
Confidence            345668888999999999998764 567899999998643  2355677888887663    789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-----------
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHG-----VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-----------  250 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~-----ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-----------  250 (437)
                      |+||||++++|.+++.......     .++..++.++.||+.||+|||++  ||+||||||+|||++.+           
T Consensus        85 ~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDLkp~NILl~~~~~~~~~~~~~~  162 (434)
T 2rio_A           85 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGA  162 (434)
T ss_dssp             EEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred             EEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC--CccccCCChHhEEEecCcccccccccCC
Confidence            9999999999999997654211     13334578999999999999964  89999999999999642           


Q ss_pred             CCCCEEEEeCCCceecCCc-------cccccccccccChhhhcC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCC
Q psy11727        251 KRSAIKIIDFGSSCHVGQT-------LYQYIQSRYYRSPEVLLG-------IPYDLAIDMWSLGCILVELHT-GEPLFSG  315 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~pf~~  315 (437)
                      .++.+||+|||++......       ....+||+.|+|||++.+       ..++.++|||||||++|||++ |.+||.+
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            3457999999999876432       224579999999999976       578999999999999999999 9999987


Q ss_pred             CCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCC
Q psy11727        316 KNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGH  395 (437)
Q Consensus       316 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (437)
                      .....  ..+.......+.                                    .                    ..-.
T Consensus       243 ~~~~~--~~i~~~~~~~~~------------------------------------~--------------------~~~~  264 (434)
T 2rio_A          243 KYSRE--SNIIRGIFSLDE------------------------------------M--------------------KCLH  264 (434)
T ss_dssp             TTTHH--HHHHHTCCCCCC------------------------------------C--------------------TTCC
T ss_pred             chhhH--HHHhcCCCCccc------------------------------------c--------------------cccc
Confidence            65432  222221100000                                    0                    0001


Q ss_pred             ChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCc
Q psy11727        396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       396 ~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      .......+.+||.+||+.||.+|||+.++++||||..
T Consensus       265 ~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          265 DRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             cccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            1122236799999999999999999999999999964

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.6e-44  Score=347.66  Aligned_cols=249  Identities=20%  Similarity=0.280  Sum_probs=200.8

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCC---eEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +...++|.+.+.||+|+||+||+|.+..++   ..||||+++...  .....+..|+.++..+     .||||+++++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  119 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-----DHPNIIRLEGVV  119 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            344678999999999999999999998554   459999997532  2233455677776655     789999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      .+.+.+++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||+  .||+||||||+|||+  +.++.+||+|
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~--~~ivH~Dlkp~NIll--~~~~~~kl~D  194 (325)
T 3kul_A          120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD--LGYVHRDLAARNVLV--DSNLVCKVSD  194 (325)
T ss_dssp             CGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEE--CTTCCEEECC
T ss_pred             EeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCcceEEE--CCCCCEEECC
Confidence            999999999999965 8999887653 469999999999999999999995  489999999999999  7788999999


Q ss_pred             CCCceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        260 FGSSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       260 FG~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      ||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+......+
T Consensus       195 fg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~  274 (325)
T 3kul_A          195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP  274 (325)
T ss_dssp             CSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             CCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC
Confidence            99998764321      12344678999999998899999999999999999999 999999988887777665432211


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ...                                                              .....+.+||.+||.
T Consensus       275 ~~~--------------------------------------------------------------~~~~~l~~li~~~l~  292 (325)
T 3kul_A          275 APM--------------------------------------------------------------GCPHALHQLMLDCWH  292 (325)
T ss_dssp             CCT--------------------------------------------------------------TCCHHHHHHHHHHTC
T ss_pred             CCC--------------------------------------------------------------CcCHHHHHHHHHHcc
Confidence            100                                                              001257899999999


Q ss_pred             cCCCCCCCHHHHhc
Q psy11727        413 YDPKKRISPTNVLR  426 (437)
Q Consensus       413 ~dP~~R~t~~e~l~  426 (437)
                      .||.+|||+.++++
T Consensus       293 ~dp~~Rps~~eil~  306 (325)
T 3kul_A          293 KDRAQRPRFSQIVS  306 (325)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=5.1e-43  Score=335.79  Aligned_cols=203  Identities=26%  Similarity=0.330  Sum_probs=167.6

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++... ........|+.+++.+.+    ++++..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~~----~~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQG----GVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTT----STTCCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc-ccchHHHHHHHHHHHhcC----CCCCCeeeeecCCCCce
Confidence            3467899999999999999999999999999999987643 334567889999998863    33455566666788999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe-cCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC-SPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~-~~~~~~ikL~DFG~s~~  265 (437)
                      ++|||+++++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+. .+.++.+||+|||++..
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~--~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~  157 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence            9999999889999987543 4599999999999999999999964  899999999999993 12467799999999976


Q ss_pred             cCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        266 VGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       266 ~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      ....          .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            5432          124578999999999999999999999999999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.9e-44  Score=345.67  Aligned_cols=256  Identities=29%  Similarity=0.417  Sum_probs=195.0

Q ss_pred             CceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        105 GEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       105 ~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      .+.+.++|++.+.||+|+||.||+|.+..+++.||||++.....       .......|+.++..+... ..|+||++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~h~~i~~~~  104 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG-GGHPGVIRLL  104 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS-CCCSSBCCEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc-CCCCCeeeEE
Confidence            45667899999999999999999999999999999999964432       123344688888877532 3789999999


Q ss_pred             ceeeECCEEEEEEEe-cc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        178 GHFTWKNHLCLVFEL-LS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~-~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      +++...+..++|||+ +. ++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+||+++ ..++.+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~-~~~~~~  179 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR--GVVHRDIKDENILID-LRRGCA  179 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH--TEECCCCSGGGEEEE-TTTTEE
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--CeeecCCChhhEEEe-CCCCeE
Confidence            999999999999999 54 58999987753  589999999999999999999964  899999999999994 167789


Q ss_pred             EEEeCCCceecCCc-cccccccccccChhhhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        256 KIIDFGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       256 kL~DFG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      ||+|||++...... .....||..|+|||++.+..+. .++|||||||++|+|++|+.||.+...      +....... 
T Consensus       180 kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~-  252 (312)
T 2iwi_A          180 KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHF-  252 (312)
T ss_dssp             EECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCCC-
T ss_pred             EEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccCC-
Confidence            99999999876443 3456789999999999876664 589999999999999999999975321      11100000 


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                                                         +                           ......+.+||.+||+.
T Consensus       253 -----------------------------------~---------------------------~~~~~~~~~li~~~l~~  270 (312)
T 2iwi_A          253 -----------------------------------P---------------------------AHVSPDCCALIRRCLAP  270 (312)
T ss_dssp             -----------------------------------C---------------------------TTSCHHHHHHHHHHTCS
T ss_pred             -----------------------------------c---------------------------ccCCHHHHHHHHHHccC
Confidence                                               0                           00012578999999999


Q ss_pred             CCCCCCCHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~t~~e~l~Hp~~~~~~~  435 (437)
                      ||.+|||+.|+++||||+....
T Consensus       271 ~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          271 KPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             STTTSCCHHHHHHSTTTCC---
T ss_pred             ChhhCcCHHHHhcChhhcCchh
Confidence            9999999999999999998653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=7.7e-44  Score=340.56  Aligned_cols=250  Identities=22%  Similarity=0.317  Sum_probs=209.6

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +...++|++.+.||+|+||+||+|.+..++..||+|++.........+..|+.+++.+     .||||+++++++.+.+.
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   83 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPP   83 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSS
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCC
Confidence            3446789999999999999999999999999999999986665567778899988887     68999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+++ +|.+++.......+++..++.++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++.
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dikp~Nil~--~~~~~~~l~Dfg~~~  159 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSR  159 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH--TCCCSCCSGGGEEE--CGGGCEEECCCCGGG
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC--CccCCCCCcceEEE--cCCCCEEEccCccce
Confidence            9999999975 899999876666799999999999999999999964  89999999999999  677889999999997


Q ss_pred             ecCCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ......    ....+|..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+.......+......+..     
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----  234 (288)
T 3kfa_A          160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-----  234 (288)
T ss_dssp             TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC-----
T ss_pred             eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCC-----
Confidence            664332    23445778999999998899999999999999999999 99999987766555544321110000     


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                               ......+.+||.+||+.||.+||
T Consensus       235 ---------------------------------------------------------~~~~~~l~~li~~~l~~dp~~Rp  257 (288)
T 3kfa_A          235 ---------------------------------------------------------EGCPEKVYELMRACWQWNPSDRP  257 (288)
T ss_dssp             ---------------------------------------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ---------------------------------------------------------CCCCHHHHHHHHHHhCCChhhCc
Confidence                                                                     00012578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |+.++++
T Consensus       258 s~~~~~~  264 (288)
T 3kfa_A          258 SFAEIHQ  264 (288)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.7e-43  Score=339.15  Aligned_cols=198  Identities=22%  Similarity=0.341  Sum_probs=171.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||+|++.... .....+..|+.++..+     .||||+++++++.+.+..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-----EHPNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCcCcccEEEEEecCCeeE
Confidence            468999999999999999999999999999999886432 2334566677777665     6899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+.+ +|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~dlkp~Nil~--~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM--NIIHRDLNSHNCLV--RENKNVVVADFGLARLM  158 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSTTSEEE--CTTSCEEECCCTTCEEC
T ss_pred             EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCcCeEEE--CCCCCEEEeecccceec
Confidence            99999965 8999887743 4699999999999999999999964  89999999999999  67888999999999765


Q ss_pred             CCccc-----------------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        267 GQTLY-----------------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       267 ~~~~~-----------------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      .....                 ..+||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            33221                 457899999999999999999999999999999999999998753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.2e-44  Score=349.97  Aligned_cols=260  Identities=28%  Similarity=0.392  Sum_probs=179.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc--hHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL--NQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.......  .+...|...    ......||||+++++++...+..
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~----~~~~~~h~niv~~~~~~~~~~~~   96 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV----VMRSSDCPYIVQFYGALFREGDC   96 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHH----HHSSCCCTTBCCEEEEEECSSEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHH----HHHcCCCCcEeeeeeEEEeCCce
Confidence            578999999999999999999999999999999997542211  122222221    22345899999999999999999


Q ss_pred             EEEEEeccCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        187 CLVFELLSYNLYNLIRN---TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~---~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++||||++++|.+++..   .....+++..+..++.|++.||.|||+. .||+||||||+|||+  +.++.+||+|||++
T Consensus        97 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~ivH~dlkp~NIll--~~~~~~kl~Dfg~~  173 (327)
T 3aln_A           97 WICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN-LKIIHRDIKPSNILL--DRSGNIKLCDFGIS  173 (327)
T ss_dssp             EEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH-HSCCCSCCCGGGEEE--ETTTEEEECCCSSS
T ss_pred             EEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc-CCEeECCCCHHHEEE--cCCCCEEEccCCCc
Confidence            99999999998887763   2235689999999999999999999953 379999999999999  56788999999999


Q ss_pred             eecCCcc--ccccccccccChhhh----cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhh
Q psy11727        264 CHVGQTL--YQYIQSRYYRSPEVL----LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV-DQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       264 ~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~p~~~~  336 (437)
                      .......  ....||+.|+|||++    .+..++.++|||||||++|+|++|+.||.+.+.. +.+..+..  +.++   
T Consensus       174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~---  248 (327)
T 3aln_A          174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPP---  248 (327)
T ss_dssp             CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCC--SCCC---
T ss_pred             eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhc--CCCC---
Confidence            7664332  234789999999999    4567899999999999999999999999864321 11000000  0000   


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                    ..+                       ..........+.+||.+||+.||.
T Consensus       249 ------------------------------~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~  275 (327)
T 3aln_A          249 ------------------------------QLS-----------------------NSEEREFSPSFINFVNLCLTKDES  275 (327)
T ss_dssp             ------------------------------CCC-----------------------CCSSCCCCHHHHHHHHHHTCSSGG
T ss_pred             ------------------------------CCC-----------------------CcccccCCHHHHHHHHHHhhCChh
Confidence                                          000                       000000112679999999999999


Q ss_pred             CCCCHHHHhcCCCcCcC
Q psy11727        417 KRISPTNVLRHEFFLKH  433 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~  433 (437)
                      +|||+.++++||||++.
T Consensus       276 ~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          276 KRPKYKELLKHPFILMY  292 (327)
T ss_dssp             GSCCHHHHTTSHHHHHH
T ss_pred             hCcCHHHHHhChHHHHh
Confidence            99999999999999753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=3.3e-44  Score=349.66  Aligned_cols=198  Identities=27%  Similarity=0.314  Sum_probs=162.3

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----  184 (437)
                      .++|++.+.||+|+||+||+|.+.  ++.||||++............|+.++     ..+.|||||++++++....    
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l-----~~l~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSL-----PGMKHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTS-----TTCCCTTBCCEEEEEEEECSSSE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHH-----hcCCCCCchhhcceeccCCCCCc
Confidence            357999999999999999999864  78999999975433233333344443     3447999999999998744    


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC--------CCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP--------ELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~--------~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      .+++||||+++ +|.+++...   .+++..++.++.||+.||+|||+.        ..||+||||||+|||+  +.++.+
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill--~~~~~~  170 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL--KNNLTA  170 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE--CTTCCE
T ss_pred             eEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE--CCCCeE
Confidence            58999999965 899998764   389999999999999999999953        1289999999999999  678899


Q ss_pred             EEEeCCCceecCCc-----cccccccccccChhhhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        256 KIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGI-----PYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       256 kL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      ||+|||++......     .....||+.|+|||++.+.     .++.++|||||||++|||++|++||.+...
T Consensus       171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence            99999999765432     2335789999999999873     456788999999999999999999987543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3.7e-43  Score=335.88  Aligned_cols=202  Identities=24%  Similarity=0.330  Sum_probs=170.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc--------hHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL--------NQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~--------~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ..++|++.+.||+|+||+||+|.+..+++.||+|++.......        ..+.+|+.++..+     .||||++++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~   91 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-----NHPNIVKLYGL   91 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-----CCTTBCCEEEE
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-----CCCCchhhhee
Confidence            3578999999999999999999999999999999986433221        4556677777665     68999999999


Q ss_pred             eeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC----
Q psy11727        180 FTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA----  254 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~----  254 (437)
                      +.+..  ++||||+. ++|.+.+.... ..+++..++.++.||+.||+|||+++.+|+||||||+|||++  .++.    
T Consensus        92 ~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~--~~~~~~~~  166 (287)
T 4f0f_A           92 MHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQ--SLDENAPV  166 (287)
T ss_dssp             ETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEES--CCCTTCSC
T ss_pred             ecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEe--ccCCCCce
Confidence            87666  69999996 58988887654 469999999999999999999996522299999999999994  4444    


Q ss_pred             -EEEEeCCCceecCCccccccccccccChhhhc--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH
Q psy11727        255 -IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL--GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV  319 (437)
Q Consensus       255 -ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~  319 (437)
                       +||+|||++...........||+.|+|||++.  ...++.++|||||||++|+|++|+.||...+..
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  234 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG  234 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence             99999999988777777788999999999994  456789999999999999999999999876543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=346.04  Aligned_cols=257  Identities=14%  Similarity=0.203  Sum_probs=191.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC---CCeEEEEEEecCCcccchHHHHHHHHHHHh----------hhcCCCCCcEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKKPFLNQAQIEVQLLEKI----------NKADIHSRYIVK  175 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l----------~~~~~~h~~iv~  175 (437)
                      .++|.+.+.||+|+||+||+|.+..   ++..||||++....   .....|..+++.+          ....+.|+||++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN---GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC----CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC---cchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            4689999999999999999999987   78899999987543   2233344333332          224458999999


Q ss_pred             ecceeeE----CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        176 LKGHFTW----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       176 l~~~~~~----~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      +++++..    ....|+||||++++|.+++....  .+++..++.++.||+.||+|||++  ||+||||||+|||++.+.
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN--EYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEESSS
T ss_pred             eecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCcCHHHEEEccCC
Confidence            9999988    78999999999779999887654  689999999999999999999964  899999999999996555


Q ss_pred             CCCEEEEeCCCceecCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC--CCHH
Q psy11727        252 RSAIKIIDFGSSCHVGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG--KNEV  319 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~--~~~~  319 (437)
                      .+.+||+|||++......          .....||..|+|||++.+..++.++|||||||++|||++|+.||.+  .+..
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence            458999999999765322          1345789999999999999999999999999999999999999965  2333


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      .............+..+....+.                                                      ...
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------~~~  294 (345)
T 2v62_A          269 AVQTAKTNLLDELPQSVLKWAPS------------------------------------------------------GSS  294 (345)
T ss_dssp             HHHHHHHHHHHTTTHHHHHHSCT------------------------------------------------------TSC
T ss_pred             HHHHHHHhhcccccHHHHhhccc------------------------------------------------------ccc
Confidence            33322222222222222110000                                                      000


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      ...+.+||.+||+.||.+|||++++++
T Consensus       295 ~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          295 CCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             CHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            126799999999999999999999875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1e-43  Score=350.60  Aligned_cols=252  Identities=24%  Similarity=0.361  Sum_probs=201.6

Q ss_pred             eeccCeeeeceecccCceEEEEEE-----EcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ...++|++.+.||+|+||.||+|.     +..+++.||||+++....  ....+..|+.++..+.    +||||++++++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~   94 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGA   94 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEE
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc----CCcceeeeeee
Confidence            346789999999999999999998     456779999999975332  2345778898888885    68999999999


Q ss_pred             eeECC-EEEEEEEeccC-cHHHHHHhcCC---------------------------------------------------
Q psy11727        180 FTWKN-HLCLVFELLSY-NLYNLIRNTNF---------------------------------------------------  206 (437)
Q Consensus       180 ~~~~~-~~~lV~E~~~~-~L~~~l~~~~~---------------------------------------------------  206 (437)
                      +...+ .+++||||+.+ +|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            88755 59999999965 89999876532                                                   


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc----
Q psy11727        207 -------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT----  269 (437)
Q Consensus       207 -------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~----  269 (437)
                                   ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++......    
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~--~ivH~Dikp~NIll--~~~~~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNILL--SEKNVVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CGGGCEEECCCGGGSCTTSCTTCE
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC--CcccCCCChhhEEE--cCCCcEEEEeccceeeecccccch
Confidence                         1289999999999999999999964  89999999999999  67888999999999765322    


Q ss_pred             -cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhh
Q psy11727        270 -LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYF  347 (437)
Q Consensus       270 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~  347 (437)
                       .....||..|+|||++.+..++.++|||||||++|||++ |.+||.+....+.+.........++.             
T Consensus       251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------  317 (359)
T 3vhe_A          251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-------------  317 (359)
T ss_dssp             EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC-------------
T ss_pred             hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC-------------
Confidence             234567889999999999999999999999999999998 99999887655444444332111100             


Q ss_pred             cccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        348 DRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                                           |                           ......+.+||.+||+.||.+|||+.|+++|
T Consensus       318 ---------------------~---------------------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          318 ---------------------P---------------------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ---------------------C---------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------------C---------------------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                                 0                           0001257899999999999999999999976

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.1e-43  Score=349.40  Aligned_cols=251  Identities=24%  Similarity=0.311  Sum_probs=205.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcC-------CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      ...++|.+.+.||+|+||+||+|.+..       ++..||||+++....  ....+.+|+.++..+.    .||||++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~  141 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLL  141 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc----CCchhhhhe
Confidence            345789999999999999999998754       336799999975422  2345667888888874    689999999


Q ss_pred             ceeeECCEEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q psy11727        178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKP  242 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp  242 (437)
                      +++...+.+++||||+++ +|.+++.....              ..+++..++.++.||+.||+|||++  ||+||||||
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp  219 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCIHRDLAA  219 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--CEecCCCCc
Confidence            999999999999999965 89999976542              3589999999999999999999964  899999999


Q ss_pred             CcEEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCC
Q psy11727        243 ENILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGK  316 (437)
Q Consensus       243 ~NIll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~  316 (437)
                      +|||+  +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       220 ~NIll--~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~  297 (382)
T 3tt0_A          220 RNVLV--TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  297 (382)
T ss_dssp             GGEEE--CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ceEEE--cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999  67889999999999765432     233456788999999999999999999999999999999 99999998


Q ss_pred             CHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCC
Q psy11727        317 NEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS  396 (437)
Q Consensus       317 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (437)
                      +..+....+.........                                                              
T Consensus       298 ~~~~~~~~~~~~~~~~~~--------------------------------------------------------------  315 (382)
T 3tt0_A          298 PVEELFKLLKEGHRMDKP--------------------------------------------------------------  315 (382)
T ss_dssp             CHHHHHHHHHTTCCCCCC--------------------------------------------------------------
T ss_pred             CHHHHHHHHHcCCCCCCC--------------------------------------------------------------
Confidence            877766655432111000                                                              


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        397 LADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       397 ~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ......+.+||.+||+.||.+|||++|+++|
T Consensus       316 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          316 SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0001257899999999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=7.3e-44  Score=354.91  Aligned_cols=246  Identities=21%  Similarity=0.319  Sum_probs=200.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .++|.+.+.||+|+||+||+|.+..+++.||||+++...  .....+..|+.++..+     .||||+++++++...+.+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-----CCTTBCCEEEEECSSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEecCCCc
Confidence            468999999999999999999999999999999987432  1223455677777665     789999999999999999


Q ss_pred             EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||++ ++|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++..
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nil~--~~~~~~kl~DfG~s~~  262 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK--CCIHRDLAARNCLV--TEKNVLKISDFGMSRE  262 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCCEEECCGGGCEE
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CcCCcccCHHHEEE--cCCCcEEECcCCCcee
Confidence            99999996 58999887653 3589999999999999999999964  89999999999999  6788999999999987


Q ss_pred             cCCcccc-----ccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        266 VGQTLYQ-----YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       266 ~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      .......     ..++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+......+...    
T Consensus       263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~----  338 (377)
T 3cbl_A          263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE----  338 (377)
T ss_dssp             CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCT----
T ss_pred             cCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC----
Confidence            6543322     224667999999998889999999999999999998 999999988766655443321111000    


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                .....+.+||.+||+.||.+||
T Consensus       339 ----------------------------------------------------------~~~~~l~~li~~cl~~dP~~Rp  360 (377)
T 3cbl_A          339 ----------------------------------------------------------LCPDAVFRLMEQCWAYEPGQRP  360 (377)
T ss_dssp             ----------------------------------------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ----------------------------------------------------------CCCHHHHHHHHHHcCCCchhCc
Confidence                                                                      0011578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |++++++
T Consensus       361 s~~~i~~  367 (377)
T 3cbl_A          361 SFSTIYQ  367 (377)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=9.3e-43  Score=354.97  Aligned_cols=245  Identities=21%  Similarity=0.295  Sum_probs=201.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC-EE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN-HL  186 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~-~~  186 (437)
                      -.++|++.+.||+|+||+||+|.+.  ++.||||+++... ....+..|+.++..+     .|||||++++++...+ .+
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTC-----CCTTBCCEEEEEECTTSCE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhc-----cCCCEEEEEEEEEcCCCce
Confidence            3578999999999999999999874  7799999997543 456778899888876     7899999999987665 79


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++||||+++ +|.+++.......+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++..
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nill--~~~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFVHRDLAARNVLV--SEDNVAKVSDFGLTKE  338 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--CTTSCEEECCCTTCEE
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCCHhhEEE--CCCCCEEEeeCCCccc
Confidence            999999965 899999877655589999999999999999999964  89999999999999  6788999999999987


Q ss_pred             cCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        266 VGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       266 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      .........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+......+...         
T Consensus       339 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~---------  409 (450)
T 1k9a_A          339 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------  409 (450)
T ss_dssp             CC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCT---------
T ss_pred             ccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------
Confidence            6555445577889999999999999999999999999999998 999999877666655554321111000         


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                           .....+.+||.+||+.||.+|||+.++
T Consensus       410 -----------------------------------------------------~~~~~l~~li~~cl~~dp~~Rpt~~~l  436 (450)
T 1k9a_A          410 -----------------------------------------------------GCPPAVYDVMKNCWHLDAATRPTFLQL  436 (450)
T ss_dssp             -----------------------------------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             -----------------------------------------------------cCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence                                                                 001257899999999999999999998


Q ss_pred             hc
Q psy11727        425 LR  426 (437)
Q Consensus       425 l~  426 (437)
                      ++
T Consensus       437 ~~  438 (450)
T 1k9a_A          437 RE  438 (450)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.6e-43  Score=330.69  Aligned_cols=246  Identities=22%  Similarity=0.302  Sum_probs=204.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++.........+..|+.++..+     .||||+++++++.+.+..++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSCEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCCeEE
Confidence            468999999999999999999986 677899999986655556777888888776     68999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||++++ +|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++....
T Consensus        81 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dl~p~Nili--~~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             EECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCCGGGEEE--CGGGCEEECCTTGGGGBC
T ss_pred             EEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCchheEEE--CCCCCEEEcccccccccc
Confidence            9999965 8999887653 4589999999999999999999964  89999999999999  677889999999997654


Q ss_pred             Ccc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    ....++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+..+....+......+...       
T Consensus       156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~-------  228 (267)
T 3t9t_A          156 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR-------  228 (267)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT-------
T ss_pred             cccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCc-------
Confidence            322    23456778999999998899999999999999999999 899999988777666654321110000       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||.+|||+.
T Consensus       229 -------------------------------------------------------~~~~~l~~li~~~l~~~p~~Rps~~  253 (267)
T 3t9t_A          229 -------------------------------------------------------LASTHVYQIMNHCWRERPEDRPAFS  253 (267)
T ss_dssp             -------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             -------------------------------------------------------cCcHHHHHHHHHHccCChhhCcCHH
Confidence                                                                   0012578999999999999999999


Q ss_pred             HHhcC
Q psy11727        423 NVLRH  427 (437)
Q Consensus       423 e~l~H  427 (437)
                      +++++
T Consensus       254 ~ll~~  258 (267)
T 3t9t_A          254 RLLRQ  258 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.5e-43  Score=331.69  Aligned_cols=248  Identities=26%  Similarity=0.403  Sum_probs=188.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-----cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.+.||+|+||+||+|.+  ++..||||+++....     ....+..|+.+++.+     .||||+++++++.+.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-----KHPNIIALRGVCLKE   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHC-----CCTTBCCEEEEECCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEecC
Confidence            56899999999999999999987  478999999864322     234566788887776     689999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCcEEEecC------CCCCE
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPEL-SIIHCDLKPENILLCSP------KRSAI  255 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~-giiHrDiKp~NIll~~~------~~~~i  255 (437)
                      +..++||||+++ +|.+++..   ..+++..++.++.||+.||+|||+++. +|+||||||+|||++.+      .++.+
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             CceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence            999999999965 77777753   358999999999999999999997531 29999999999999532      26779


Q ss_pred             EEEeCCCceecCCc-cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        256 KIIDFGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       256 kL~DFG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ||+|||++...... .....||+.|+|||++.+..++.++||||||+++|+|++|++||.+.+.......+......++ 
T Consensus       156 kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-  234 (271)
T 3dtc_A          156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-  234 (271)
T ss_dssp             EECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC-
T ss_pred             EEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC-
Confidence            99999999765433 2346789999999999998999999999999999999999999998877655544432110000 


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                       .+                           ......+.+||.+||+.|
T Consensus       235 ---------------------------------~~---------------------------~~~~~~~~~li~~~l~~~  254 (271)
T 3dtc_A          235 ---------------------------------IP---------------------------STCPEPFAKLMEDCWNPD  254 (271)
T ss_dssp             ---------------------------------CC---------------------------TTCCHHHHHHHHHHTCSS
T ss_pred             ---------------------------------CC---------------------------cccCHHHHHHHHHHhcCC
Confidence                                             00                           000125789999999999


Q ss_pred             CCCCCCHHHHhcC
Q psy11727        415 PKKRISPTNVLRH  427 (437)
Q Consensus       415 P~~R~t~~e~l~H  427 (437)
                      |.+|||+.|+++|
T Consensus       255 p~~Rps~~e~l~~  267 (271)
T 3dtc_A          255 PHSRPSFTNILDQ  267 (271)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.2e-43  Score=362.51  Aligned_cols=248  Identities=22%  Similarity=0.310  Sum_probs=208.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      -.++|.+.+.||+|+||+||+|.+..++..||||+++........+..|+.++..+     .|||||++++++...+.++
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~~~~  292 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFY  292 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-----CCCCEeeEEEEEecCCcEE
Confidence            35679999999999999999999999999999999986655567788899999887     6899999999999999999


Q ss_pred             EEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+. ++|.+++.......+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll--~~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFIHRNLAARNCLV--GENHLVKVADFGLSRLM  368 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CGGGCEEECCTTCEECC
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCChhhEEE--CCCCcEEEeecccceec
Confidence            9999996 5899999876656799999999999999999999964  89999999999999  67888999999999876


Q ss_pred             CCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      .....    ...++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+......+..       
T Consensus       369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-------  441 (495)
T 1opk_A          369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP-------  441 (495)
T ss_dssp             TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC-------
T ss_pred             cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-------
Confidence            43322    2344678999999998899999999999999999999 99999988766555544321111100       


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                             ......+.+||.+||+.||.+|||+
T Consensus       442 -------------------------------------------------------~~~~~~l~~li~~cl~~dP~~RPs~  466 (495)
T 1opk_A          442 -------------------------------------------------------EGCPEKVYELMRACWQWNPSDRPSF  466 (495)
T ss_dssp             -------------------------------------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             -------------------------------------------------------CCCCHHHHHHHHHHcCcChhHCcCH
Confidence                                                                   0001257899999999999999999


Q ss_pred             HHHhc
Q psy11727        422 TNVLR  426 (437)
Q Consensus       422 ~e~l~  426 (437)
                      .++++
T Consensus       467 ~el~~  471 (495)
T 1opk_A          467 AEIHQ  471 (495)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99976

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.5e-43  Score=345.74  Aligned_cols=196  Identities=16%  Similarity=0.149  Sum_probs=166.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC--------CeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEE-----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE--------KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVK-----  175 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~--------~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~-----  175 (437)
                      .++|.+.+.||+|+||+||+|.+..+        ++.||||++...    ..+..|+.+++.+.     ||||++     
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~-----h~niv~~~~~~  111 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAA-----KPLQVNKWKKL  111 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHC-----CHHHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhc-----ccchhhhhhhh
Confidence            36899999999999999999999874        789999999744    46778999998884     555555     


Q ss_pred             ----------ecceeeE-CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        176 ----------LKGHFTW-KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       176 ----------l~~~~~~-~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                                +++++.. .+..++||||++++|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|
T Consensus       112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dikp~N  189 (352)
T 2jii_A          112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN--EYVHGNVTAEN  189 (352)
T ss_dssp             TTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCCGGG
T ss_pred             ccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCHHH
Confidence                      6777776 7899999999977999999876445699999999999999999999964  89999999999


Q ss_pred             EEEecCCCC--CEEEEeCCCceecCCcc----------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        245 ILLCSPKRS--AIKIIDFGSSCHVGQTL----------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       245 Ill~~~~~~--~ikL~DFG~s~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      ||++  .++  .+||+|||++.......          ....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       190 Il~~--~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          190 IFVD--PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             EEEE--TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             EEEc--CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9995  455  89999999997653321          234789999999999999999999999999999999999999


Q ss_pred             CCCCC
Q psy11727        313 FSGKN  317 (437)
Q Consensus       313 f~~~~  317 (437)
                      |.+..
T Consensus       268 f~~~~  272 (352)
T 2jii_A          268 WTNCL  272 (352)
T ss_dssp             TGGGT
T ss_pred             cccCC
Confidence            98764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.1e-42  Score=334.42  Aligned_cols=198  Identities=23%  Similarity=0.321  Sum_probs=162.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ..+.++|++.+.||+|+||+||+|.+  +++.||||++....  ......|..++....   +.||||+++++++..   
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~---l~h~niv~~~~~~~~~~~   76 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVM---LRHENILGFIASDMTSRH   76 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTC---CCCTTBCCEEEEEEEEET
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhh---ccCcCeeeEEEeeccccC
Confidence            45678999999999999999999986  68899999996432  344455666655532   489999999998764   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCCCC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKRSA  254 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~~~  254 (437)
                       ...+++||||+++ +|.+++...   .+++..+..++.||+.||+|||..      ..||+||||||+|||+  +.++.
T Consensus        77 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill--~~~~~  151 (301)
T 3q4u_A           77 SSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV--KKNGQ  151 (301)
T ss_dssp             TEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE--CTTSC
T ss_pred             CCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE--cCCCC
Confidence             3578999999965 899998543   589999999999999999999932      3489999999999999  67889


Q ss_pred             EEEEeCCCceecCCcc-------ccccccccccChhhhcCC------CCCCcchHHHHHHHHHHHHhC----------CC
Q psy11727        255 IKIIDFGSSCHVGQTL-------YQYIQSRYYRSPEVLLGI------PYDLAIDMWSLGCILVELHTG----------EP  311 (437)
Q Consensus       255 ikL~DFG~s~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg----------~~  311 (437)
                      +||+|||++.......       ....||+.|+|||++.+.      .++.++|||||||++|||++|          .+
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~  231 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP  231 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence            9999999997653322       234789999999999886      455789999999999999999          88


Q ss_pred             CCCC
Q psy11727        312 LFSG  315 (437)
Q Consensus       312 pf~~  315 (437)
                      ||..
T Consensus       232 pf~~  235 (301)
T 3q4u_A          232 PFYD  235 (301)
T ss_dssp             TTTT
T ss_pred             cccc
Confidence            8855

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-43  Score=343.43  Aligned_cols=250  Identities=24%  Similarity=0.328  Sum_probs=202.4

Q ss_pred             eeccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ...++|++.+.||+|+||.||+|.+.     .+++.||||+++....  ....+.+|+.++..+     .||||++++++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~  118 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLLGV  118 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEE
Confidence            34678999999999999999999987     4558999999975322  234566777777766     68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCee
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTN----------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSII  236 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~----------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~gii  236 (437)
                      +.+.+..++||||+++ +|.+++....                      ...+++..++.++.||+.||.|||++  ||+
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~iv  196 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--KFV  196 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--TCC
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC--Cee
Confidence            9999999999999965 8999987642                      14689999999999999999999964  899


Q ss_pred             eCCCCCCcEEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CC
Q psy11727        237 HCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GE  310 (437)
Q Consensus       237 HrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~  310 (437)
                      ||||||+|||+  +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       197 H~Dlkp~NIl~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  274 (343)
T 1luf_A          197 HRDLATRNCLV--GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  274 (343)
T ss_dssp             CSCCSGGGEEE--CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCcceEEE--CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence            99999999999  67888999999999765322     223567889999999998899999999999999999999 99


Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCC
Q psy11727        311 PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRR  390 (437)
Q Consensus       311 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (437)
                      .||.+.+..+....+......+.                                   |                     
T Consensus       275 ~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------~---------------------  298 (343)
T 1luf_A          275 QPYYGMAHEEVIYYVRDGNILAC-----------------------------------P---------------------  298 (343)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCC-----------------------------------C---------------------
T ss_pred             CcCCCCChHHHHHHHhCCCcCCC-----------------------------------C---------------------
Confidence            99999887776665543211000                                   0                     


Q ss_pred             CCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        391 NEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       391 ~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                            ......+.+||.+||+.||.+|||+.+++++
T Consensus       299 ------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          299 ------ENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             ------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                  0001157899999999999999999999863

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=4e-43  Score=335.78  Aligned_cols=245  Identities=22%  Similarity=0.330  Sum_probs=195.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCC-------eEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEK-------CQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~-------~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ..++|.+.+.||+|+||+||+|.+..++       ..||+|++.... .....+..|+.++..+     .||||++++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~   80 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-----SHKHLVLNYGV   80 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-----CCTTBCCEEEE
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-----CCCCEeEEEEE
Confidence            3578999999999999999999988877       579999986433 2335566788777776     68999999999


Q ss_pred             eeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCC----
Q psy11727        180 FTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSA----  254 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~----  254 (437)
                      +.+.+..++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||++.  ++.    
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~Dlkp~NIll~~--~~~~~~~  155 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN--TLIHGNVCAKNILLIR--EEDRKTG  155 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEEEE--CCBGGGT
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC--CeECCCcCcceEEEec--CCccccc
Confidence            999999999999996 58999987653 3489999999999999999999964  8999999999999954  444    


Q ss_pred             ----EEEEeCCCceecCCccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHH
Q psy11727        255 ----IKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       255 ----ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~  328 (437)
                          +||+|||++...... ....||..|+|||++.+ ..++.++|||||||++|+|++| .+||...+...........
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~  234 (289)
T 4fvq_A          156 NPPFIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR  234 (289)
T ss_dssp             BCCEEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred             ccceeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc
Confidence                999999998765443 34568899999999988 6799999999999999999995 5666665554433322211


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...|+.                                                                ....+.+||.
T Consensus       235 ~~~~~~----------------------------------------------------------------~~~~l~~li~  250 (289)
T 4fvq_A          235 HQLPAP----------------------------------------------------------------KAAELANLIN  250 (289)
T ss_dssp             CCCCCC----------------------------------------------------------------SSCTTHHHHH
T ss_pred             CCCCCC----------------------------------------------------------------CCHHHHHHHH
Confidence            100000                                                                0014689999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q psy11727        409 RMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~H  427 (437)
                      +||+.||.+|||+.++++|
T Consensus       251 ~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          251 NCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHSCSSGGGSCCHHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHHH
Confidence            9999999999999999874

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.2e-43  Score=342.36  Aligned_cols=204  Identities=26%  Similarity=0.370  Sum_probs=155.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee------
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT------  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~------  181 (437)
                      ..+|++.+.||+|+||+||+|.+..+++.||||++.... .....+..|+.++..+.    .||||+++++++.      
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----~h~~iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS----GHPNIVQFCSAASIGKEES  102 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT----TSTTBCCEEEEEEECTTTS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc----cCCChhhcccccccccccc
Confidence            458999999999999999999999999999999885433 22345667888888774    5899999999984      


Q ss_pred             --ECCEEEEEEEeccCcHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        182 --WKNHLCLVFELLSYNLYNLIRN-TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       182 --~~~~~~lV~E~~~~~L~~~l~~-~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                        ....+++||||++|+|.+++.. .....+++..++.++.||+.||+|||+++.+|+||||||+|||+  +.++.+||+
T Consensus       103 ~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~--~~~~~~kl~  180 (337)
T 3ll6_A          103 DTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL--SNQGTIKLC  180 (337)
T ss_dssp             TTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE--CTTSCEEBC
T ss_pred             ccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE--CCCCCEEEe
Confidence              3456899999999999998865 23345999999999999999999999652239999999999999  678889999


Q ss_pred             eCCCceecCCcc---------------ccccccccccChhhh---cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        259 DFGSSCHVGQTL---------------YQYIQSRYYRSPEVL---LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       259 DFG~s~~~~~~~---------------~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      |||++.......               ....||+.|+|||++   .+..++.++|||||||++|+|++|+.||.+...
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  258 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK  258 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence            999997654321               144689999999998   566789999999999999999999999976543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-42  Score=335.11  Aligned_cols=244  Identities=26%  Similarity=0.445  Sum_probs=186.8

Q ss_pred             eeccCeeee-ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        107 KFLDRYEID-TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       107 ~~~~~y~i~-~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .+.++|.+. +.||+|+||.||+|.+..+++.||+|++...    .....|+.++..+.    .||||+++++++..   
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~----~h~~i~~~~~~~~~~~~   85 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYA   85 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEET
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhc----cCCCchhHHhhhhhhcC
Confidence            346778887 7899999999999999999999999999743    45667777775543    78999999999987   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEEEEe
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIKIID  259 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ikL~D  259 (437)
                       ...+++||||+++ +|.+++.......+++..++.++.||+.||+|||++  ||+||||||+|||++.+. ++.+||+|
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEEecCCCCCcEEEec
Confidence             7789999999965 999999887656799999999999999999999964  899999999999995322 67899999


Q ss_pred             CCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        260 FGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       260 FG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ||++....                   +..++.++|||||||++|+|++|++||.+.+.......+..            
T Consensus       164 fg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~------------  212 (299)
T 3m2w_A          164 FGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT------------  212 (299)
T ss_dssp             CTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC------------
T ss_pred             cccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH------------
Confidence            99986443                   23578899999999999999999999987654321110000            


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                               .+..+.+           ..|    ....                   ......+.+||.+||+.||.+||
T Consensus       213 ---------~~~~~~~-----------~~~----~~~~-------------------~~~~~~~~~li~~~l~~dP~~Rp  249 (299)
T 3m2w_A          213 ---------RIRMGQY-----------EFP----NPEW-------------------SEVSEEVKMLIRNLLKTEPTQRM  249 (299)
T ss_dssp             ---------SSCTTCC-----------SSC----HHHH-------------------TTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             ---------HHhhccc-----------cCC----chhc-------------------ccCCHHHHHHHHHHcccChhhCC
Confidence                     0000000           000    0000                   00112689999999999999999


Q ss_pred             CHHHHhcCCCcCcCC
Q psy11727        420 SPTNVLRHEFFLKHS  434 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~  434 (437)
                      |+.|+++||||++..
T Consensus       250 s~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          250 TITEFMNHPWIMQST  264 (299)
T ss_dssp             CHHHHHTSHHHHTGG
T ss_pred             CHHHHhcChhhcccc
Confidence            999999999997653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.6e-43  Score=342.62  Aligned_cols=246  Identities=20%  Similarity=0.252  Sum_probs=195.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeE----EEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQ----VAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|++.+.||+|+||+||+|.+..+++.    ||+|.+....  .....+..|+.++..+     .||||+++++++. 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~-   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-----DHAHIVRLLGLCP-   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-----CCTTBCCEEEEEC-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEc-
Confidence            46899999999999999999999888765    7778775332  2234556677777665     7899999999887 


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+..++||||+. ++|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~--~~~~~~kl~Dfg  160 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH--GMVHRNLAARNVLL--KSPSQVQVADFG  160 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT--TCCCSCCSSTTEEE--SSSSCEEECSCS
T ss_pred             CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC--CCCCCccchheEEE--CCCCeEEECCCC
Confidence            466889999996 58999887653 4589999999999999999999964  89999999999999  678889999999


Q ss_pred             CceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++......     .....++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+...
T Consensus       161 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (325)
T 3kex_A          161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ  240 (325)
T ss_dssp             GGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT
T ss_pred             cccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCC
Confidence            99765332     233456789999999998899999999999999999999 999999877666555543311110000


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      .                                                              ....+.+||.+||+.||
T Consensus       241 ~--------------------------------------------------------------~~~~~~~li~~~l~~dp  258 (325)
T 3kex_A          241 I--------------------------------------------------------------CTIDVYMVMVKCWMIDE  258 (325)
T ss_dssp             T--------------------------------------------------------------BCTTTTHHHHHHTCSCT
T ss_pred             c--------------------------------------------------------------CcHHHHHHHHHHcCCCh
Confidence            0                                                              00135799999999999


Q ss_pred             CCCCCHHHHhcC
Q psy11727        416 KKRISPTNVLRH  427 (437)
Q Consensus       416 ~~R~t~~e~l~H  427 (437)
                      .+|||+.++++|
T Consensus       259 ~~Rps~~el~~~  270 (325)
T 3kex_A          259 NIRPTFKELANE  270 (325)
T ss_dssp             TTSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.5e-42  Score=332.50  Aligned_cols=201  Identities=23%  Similarity=0.368  Sum_probs=162.7

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..++|++.+.||+|+||+||+|.+..+++.||+|++......    ...+..|+.++..+     .||||+++++++...
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~~~~~  106 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-----QEPHVVPIHDFGEID  106 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEET
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-----CCCCeeEEEEEEeeC
Confidence            357899999999999999999999999999999999744222    23455566666554     789999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++|||++++ +|.+++....  .+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~NIl~--~~~~~~kl~Dfg~  180 (309)
T 2h34_A          107 GQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA--GATHRDVKPENILV--SADDFAYLVDFGI  180 (309)
T ss_dssp             TEEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTSCEEECSCCC
T ss_pred             CeEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--cCCcCCCChHHEEE--cCCCCEEEecCcc
Confidence            999999999976 8999887653  589999999999999999999964  89999999999999  6778899999999


Q ss_pred             ceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHH
Q psy11727        263 SCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEV  319 (437)
Q Consensus       263 s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~  319 (437)
                      +......    .....|++.|+|||++.+..++.++||||||+++|+|++|++||.+.+..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  241 (309)
T 2h34_A          181 ASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS  241 (309)
T ss_dssp             ----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH
T ss_pred             CccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH
Confidence            8765432    23457899999999999999999999999999999999999999987654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.8e-43  Score=339.02  Aligned_cols=248  Identities=25%  Similarity=0.338  Sum_probs=199.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||.||+|.+.     .++..||||++.....  ....+..|+.++..+     .||||+++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~   96 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-----NHPHVIKLYGACS   96 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCceeeEEEEEe
Confidence            578999999999999999999873     4568999999974321  223455666666555     7999999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNF----------------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHC  238 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~----------------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHr  238 (437)
                      +.+..++||||+. ++|.+++.....                      ..+++..++.++.||+.||+|||++  ||+||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~  174 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM--KLVHR  174 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT--TEECC
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC--CCccc
Confidence            9999999999996 589999876532                      2389999999999999999999964  89999


Q ss_pred             CCCCCcEEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCC
Q psy11727        239 DLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPL  312 (437)
Q Consensus       239 DiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~p  312 (437)
                      ||||+|||+  +.++.+||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|+|++ |.+|
T Consensus       175 dikp~NIli--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          175 DLAARNILV--AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CCSGGGEEE--ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccchheEEE--cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999  567789999999997664321     23456788999999999889999999999999999999 9999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+.+.......+......+.                                   +                       
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------~-----------------------  274 (314)
T 2ivs_A          253 YPGIPPERLFNLLKTGHRMER-----------------------------------P-----------------------  274 (314)
T ss_dssp             STTCCGGGHHHHHHTTCCCCC-----------------------------------C-----------------------
T ss_pred             CCCCCHHHHHHHhhcCCcCCC-----------------------------------C-----------------------
Confidence            998877655544432110000                                   0                       


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                          ......+.+||.+||+.||.+|||+.++++|
T Consensus       275 ----~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          275 ----DNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                0001257899999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.1e-43  Score=341.98  Aligned_cols=246  Identities=19%  Similarity=0.272  Sum_probs=191.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeE----EEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQ----VAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~----vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|++.+.||+|+||+||+|.+..+++.    ||+|.+....  .....+..|+.++..+     .||||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-----CBTTBCCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEec
Confidence            46799999999999999999998887765    4777775322  2345677788888877     68999999999987


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+ .++|+|++. |+|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~--~ivH~Dikp~NIll--~~~~~~kl~Dfg  162 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR--RLVHRDLAARNVLV--KTPQHVKITDFG  162 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--EETTEEEECCTT
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC--CeeCCCCChheEEE--CCCCCEEEccCc
Confidence            65 678888885 58999887754 4699999999999999999999964  89999999999999  567789999999


Q ss_pred             CceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++.......     ....+|..|+|||++.+..++.++|||||||++|||++ |++||.+.+..+....+......+.. 
T Consensus       163 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-  241 (327)
T 3poz_A          163 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-  241 (327)
T ss_dssp             HHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-
T ss_pred             ceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCC-
Confidence            997654322     23345778999999999999999999999999999999 99999987766554444321111100 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                   ......+.+||.+||+.||
T Consensus       242 -------------------------------------------------------------~~~~~~~~~li~~~l~~~p  260 (327)
T 3poz_A          242 -------------------------------------------------------------PICTIDVYMIMVKCWMIDA  260 (327)
T ss_dssp             -------------------------------------------------------------TTBCHHHHHHHHHHTCSCG
T ss_pred             -------------------------------------------------------------ccCCHHHHHHHHHHcCCCh
Confidence                                                                         0001257899999999999


Q ss_pred             CCCCCHHHHhcC
Q psy11727        416 KKRISPTNVLRH  427 (437)
Q Consensus       416 ~~R~t~~e~l~H  427 (437)
                      .+|||+.++++|
T Consensus       261 ~~Rps~~ell~~  272 (327)
T 3poz_A          261 DSRPKFRELIIE  272 (327)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCCCHHHHHHH
Confidence            999999999865

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=6.7e-42  Score=350.67  Aligned_cols=204  Identities=25%  Similarity=0.322  Sum_probs=175.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++... ....++..|+.+++.+.+    ++++..+..++...+..
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~E~~il~~L~~----~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK-TKHPQLLYESKIYRILQG----GTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETT-CSSCCHHHHHHHHHHTTT----STTCCCEEEEEEETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc-cccHHHHHHHHHHHHhcC----CCCCCeEEEEEeeCCEE
Confidence            4568999999999999999999999999999999998743 334567889999998863    34566677777889999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~s~~  265 (437)
                      +|||||++++|.+++.... ..+++..++.|+.||+.||+|||++  |||||||||+||||+. +..+.+||+|||++..
T Consensus        79 ~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~--gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           79 VLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK--SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             EEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC--CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            9999999889999997643 4699999999999999999999964  8999999999999942 2567899999999976


Q ss_pred             cCCcc----------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        266 VGQTL----------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       266 ~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      .....          ....||..|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  218 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA  218 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence            64322          156789999999999999999999999999999999999999987543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=5.4e-43  Score=334.03  Aligned_cols=248  Identities=25%  Similarity=0.333  Sum_probs=188.5

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ...++|++.+.||+|+||+||+|.+..+   +..||+|++....  .....+..|+.++..+     .||||+++++++.
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~   86 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT   86 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCccceEEEEEc
Confidence            3467899999999999999999998653   5679999987432  1223455666666655     7899999999875


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       .+..++||||+++ +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~kl~Df  160 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLV--SSNDCVKLGDF  160 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEECC-
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC--CeecccccHHHEEE--CCCCCEEECcc
Confidence             5678999999976 8999887653 4589999999999999999999964  89999999999999  55778999999


Q ss_pred             CCceecCCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        261 GSSCHVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       261 G~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      |++.......    ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+.. 
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~-  239 (281)
T 1mp8_A          161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-  239 (281)
T ss_dssp             ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-
T ss_pred             ccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC-
Confidence            9997664322    23456778999999998899999999999999999997 99999988776666655432110000 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                   ......+.+||.+||+.||
T Consensus       240 -------------------------------------------------------------~~~~~~l~~li~~~l~~~p  258 (281)
T 1mp8_A          240 -------------------------------------------------------------PNCPPTLYSLMTKCWAYDP  258 (281)
T ss_dssp             -------------------------------------------------------------TTCCHHHHHHHHHHTCSSG
T ss_pred             -------------------------------------------------------------CCCCHHHHHHHHHHccCCh
Confidence                                                                         0001257899999999999


Q ss_pred             CCCCCHHHHhcC
Q psy11727        416 KKRISPTNVLRH  427 (437)
Q Consensus       416 ~~R~t~~e~l~H  427 (437)
                      .+|||+.+++++
T Consensus       259 ~~Rps~~~l~~~  270 (281)
T 1mp8_A          259 SRRPRFTELKAQ  270 (281)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=9.4e-43  Score=355.33  Aligned_cols=248  Identities=22%  Similarity=0.340  Sum_probs=204.9

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +...++|.+.+.||+|+||+||+|.+. ++..||||+++........+..|+.++..+     .|||||++++++. .+.
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SSS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhC-----CCCCEeeEEEEEe-CCc
Confidence            344678999999999999999999875 467899999986655566777888887766     7899999999886 667


Q ss_pred             EEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +++||||+. |+|.+++.......+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++.
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--~ivHrDlkp~Nill--~~~~~~kl~DFG~a~  332 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--NYIHRDLRAANILV--SASLVCKIADFGLAR  332 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSSCSGGGEEE--CTTCCEEECSTTGGG
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCCHHHEEE--CCCCcEEEeeCCCce
Confidence            899999995 5899999765434589999999999999999999964  89999999999999  678899999999998


Q ss_pred             ecCCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      .......    ...++..|+|||++.+..++.++|||||||++|||++ |++||.+.+..+....+......+....   
T Consensus       333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~---  409 (454)
T 1qcf_A          333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN---  409 (454)
T ss_dssp             GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTT---
T ss_pred             EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC---
Confidence            7644322    2345678999999998899999999999999999999 9999999888877777655332221100   


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                                                 ....+.+||.+||+.||.+||
T Consensus       410 -----------------------------------------------------------~~~~l~~li~~cl~~dp~~RP  430 (454)
T 1qcf_A          410 -----------------------------------------------------------CPEELYNIMMRCWKNRPEERP  430 (454)
T ss_dssp             -----------------------------------------------------------SCHHHHHHHHHHTCSSGGGSC
T ss_pred             -----------------------------------------------------------CCHHHHHHHHHHccCChhHCc
Confidence                                                                       001578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |++++++
T Consensus       431 t~~~i~~  437 (454)
T 1qcf_A          431 TFEYIQS  437 (454)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-42  Score=341.40  Aligned_cols=252  Identities=25%  Similarity=0.351  Sum_probs=201.3

Q ss_pred             eccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ..++|.+.+.||+|+||+||+|.+     ..++..||||++....  .....+..|+.++..+.    .||||+++++++
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~  118 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG----SHENIVNLLGAC  118 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC----CCTTBCCEEEEE
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc----CCCCeeeEEEEE
Confidence            357899999999999999999997     3467789999997432  33456778999988874    689999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNF---------------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHC  238 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~---------------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHr  238 (437)
                      ...+..++||||+++ +|.+++.....                     ..+++..++.++.||+.||+|||++  ||+||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~  196 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--SCVHR  196 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT--TEEET
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CcccC
Confidence            999999999999965 99999876532                     2379999999999999999999964  89999


Q ss_pred             CCCCCcEEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCC
Q psy11727        239 DLKPENILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPL  312 (437)
Q Consensus       239 DiKp~NIll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~p  312 (437)
                      ||||+|||+  +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|+| |.+|
T Consensus       197 Dikp~NIll--~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          197 DLAARNVLV--THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             TCSGGGEEE--ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CCChhhEEE--cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            999999999  56788999999999765322     123456788999999999899999999999999999998 9999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+......+..+......++.                                  |                       
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------~-----------------------  297 (344)
T 1rjb_A          275 YPGIPVDANFYKLIQNGFKMDQ----------------------------------P-----------------------  297 (344)
T ss_dssp             STTCCCSHHHHHHHHTTCCCCC----------------------------------C-----------------------
T ss_pred             cccCCcHHHHHHHHhcCCCCCC----------------------------------C-----------------------
Confidence            9887655444444331100000                                  0                       


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCC
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHE  428 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp  428 (437)
                          ......+.+||.+||+.||.+|||+.++++|-
T Consensus       298 ----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          298 ----FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             ----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence                00012578999999999999999999999763

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=6e-43  Score=350.59  Aligned_cols=276  Identities=21%  Similarity=0.315  Sum_probs=204.7

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ..+.++|.+.+.||+|+||+||+|.+..+++.||||++....  .......+|+.++..+     .||||+++++++...
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~   79 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEET   79 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECT
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCCCeEEEeeccC
Confidence            345678999999999999999999999999999999997432  2234566788888877     689999999999876


Q ss_pred             C--EEEEEEEeccC-cHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec--CCCCCEEE
Q psy11727        184 N--HLCLVFELLSY-NLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKI  257 (437)
Q Consensus       184 ~--~~~lV~E~~~~-~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~--~~~~~ikL  257 (437)
                      +  +.++||||+.+ +|.+++.... ...+++..++.++.||+.||+|||++  ||+||||||+|||+..  +.++.+||
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll~~~~~~~~~~kL  157 (396)
T 4eut_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKL  157 (396)
T ss_dssp             TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEEEECTTSCEEEEE
T ss_pred             CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC--CEEECCcCHHHEEEeecCCCceeEEE
Confidence            5  88999999965 8999887643 23489999999999999999999964  8999999999999843  34556999


Q ss_pred             EeCCCceecCCc--cccccccccccChhhhcC--------CCCCCcchHHHHHHHHHHHHhCCCCCCCCC----HHHHHH
Q psy11727        258 IDFGSSCHVGQT--LYQYIQSRYYRSPEVLLG--------IPYDLAIDMWSLGCILVELHTGEPLFSGKN----EVDQMT  323 (437)
Q Consensus       258 ~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlG~il~elltg~~pf~~~~----~~~~~~  323 (437)
                      +|||++......  .....||+.|+|||++.+        ..++.++|||||||++|||++|++||....    ..+.+.
T Consensus       158 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~  237 (396)
T 4eut_A          158 TDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY  237 (396)
T ss_dssp             CCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHH
T ss_pred             ecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHH
Confidence            999999876443  235678999999999875        467889999999999999999999996532    233333


Q ss_pred             HHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHH
Q psy11727        324 KIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKF  403 (437)
Q Consensus       324 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (437)
                      .+..  +.|+.. +.....       ...+.+....       ..|                     .....+......+
T Consensus       238 ~~~~--~~p~~~-~~~~~~-------~~~~~~~~~~-------~~~---------------------~~~~l~~~~~~~l  279 (396)
T 4eut_A          238 KIIT--GKPSGA-ISGVQK-------AENGPIDWSG-------DMP---------------------VSCSLSRGLQVLL  279 (396)
T ss_dssp             HHHH--SCCTTC-CEEEEC-------STTCCEEEES-------SCC---------------------TTCSSCHHHHHHH
T ss_pred             HHhc--CCCccc-chhhee-------ccCCCcccCc-------cCC---------------------cccccchHHHhhc
Confidence            3332  233322 111100       0000000000       000                     0112234445578


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q psy11727        404 KDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       404 ~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      .+||.+||++||.+|||++|+++
T Consensus       280 ~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          280 TPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             hHHHHHhhccChhhhccHHHHHH
Confidence            99999999999999999999854

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.1e-43  Score=335.29  Aligned_cols=249  Identities=26%  Similarity=0.339  Sum_probs=203.1

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ....+|+.++..+     .||||+++++++..   
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   78 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-----DHVNIVHYNGCWDGFDY   78 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-----CCTTBCCEEEEEEEEEE
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-----CCCCEEEEeeeEecccc
Confidence            456788999999999999999999999999999999997543   4567788888877     68999999998865   


Q ss_pred             -------------CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEe
Q psy11727        183 -------------KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLC  248 (437)
Q Consensus       183 -------------~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~  248 (437)
                                   ...+++||||+++ +|.+++.......+++..++.++.||+.||.|||++  ||+||||||+|||+ 
T Consensus        79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dlkp~Nil~-  155 (284)
T 2a19_B           79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK--KLINRDLKPSNIFL-  155 (284)
T ss_dssp             C---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE-
T ss_pred             CcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--CeeeccCCHHHEEE-
Confidence                         4568999999976 899999876555799999999999999999999964  89999999999999 


Q ss_pred             cCCCCCEEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q psy11727        249 SPKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       249 ~~~~~~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~  326 (437)
                       +.++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||....  .....+.
T Consensus       156 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~  232 (284)
T 2a19_B          156 -VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--KFFTDLR  232 (284)
T ss_dssp             -EETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--HHHHHHH
T ss_pred             -cCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--HHHHHhh
Confidence             56778999999999776432  344678999999999999999999999999999999999998875321  1111111


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .  +..+.                                                               .....+.+|
T Consensus       233 ~--~~~~~---------------------------------------------------------------~~~~~~~~l  247 (284)
T 2a19_B          233 D--GIISD---------------------------------------------------------------IFDKKEKTL  247 (284)
T ss_dssp             T--TCCCT---------------------------------------------------------------TSCHHHHHH
T ss_pred             c--ccccc---------------------------------------------------------------cCCHHHHHH
Confidence            0  00000                                                               000157899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+||+.||.+|||+.|+++|.+.-+.
T Consensus       248 i~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          248 LQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            999999999999999999999876443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-42  Score=335.89  Aligned_cols=250  Identities=26%  Similarity=0.354  Sum_probs=202.5

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|.+.+.||+|+||+||+|.+     ..+++.||+|++.....  ....+..|+.++..+.    .||||+++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~   97 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHMNIVNLLGACT   97 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc----cCCCeeeEEEEEe
Confidence            57899999999999999999985     45778999999975432  2345677888888874    6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTNF----------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~~----------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +.+..++||||+++ +|.+++.....                ..+++..++.++.||+.||+|||++  ||+||||||+|
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~N  175 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARN  175 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGG
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC--CeecCCCccce
Confidence            99999999999966 89999876542                2489999999999999999999964  89999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+...
T Consensus       176 il~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          176 ILL--THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             EEE--ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             EEE--cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence            999  567889999999997764432     23456778999999999999999999999999999999 9999988765


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      ......+......++.                                  +                           ..
T Consensus       254 ~~~~~~~~~~~~~~~~----------------------------------~---------------------------~~  272 (313)
T 1t46_A          254 DSKFYKMIKEGFRMLS----------------------------------P---------------------------EH  272 (313)
T ss_dssp             SHHHHHHHHHTCCCCC----------------------------------C---------------------------TT
T ss_pred             hhHHHHHhccCCCCCC----------------------------------c---------------------------cc
Confidence            5544444332111000                                  0                           00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||+.||.+|||+.|++++
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            01257899999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1e-42  Score=338.31  Aligned_cols=258  Identities=22%  Similarity=0.315  Sum_probs=205.2

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEe
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKL  176 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l  176 (437)
                      ..+...++|.+.+.||+|+||+||+|.+.     .+++.||||++......  ...+.+|+.++..+     .|+||+++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~   93 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRL   93 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-----CCCCEeee
Confidence            34555789999999999999999999876     46788999999743321  22345566666554     78999999


Q ss_pred             cceeeECCEEEEEEEeccC-cHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        177 KGHFTWKNHLCLVFELLSY-NLYNLIRNTN--------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       177 ~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~--------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      ++++.+.+..++||||+++ +|.+++....        ...+++..+..++.||+.||+|||++  ||+||||||+|||+
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~NIli  171 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMV  171 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCSGGGEEE
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC--CCccCCCccceEEE
Confidence            9999999999999999965 8999886532        23579999999999999999999964  89999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQ  321 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~  321 (437)
                        +.++.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+.
T Consensus       172 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  249 (322)
T 1p4o_A          172 --AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV  249 (322)
T ss_dssp             --CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred             --cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence              678899999999997653321     23456788999999998899999999999999999999 8999999887766


Q ss_pred             HHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhh
Q psy11727        322 MTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM  401 (437)
Q Consensus       322 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (437)
                      ...+......+.                                   +                           .....
T Consensus       250 ~~~~~~~~~~~~-----------------------------------~---------------------------~~~~~  267 (322)
T 1p4o_A          250 LRFVMEGGLLDK-----------------------------------P---------------------------DNCPD  267 (322)
T ss_dssp             HHHHHTTCCCCC-----------------------------------C---------------------------TTCCH
T ss_pred             HHHHHcCCcCCC-----------------------------------C---------------------------CCCCH
Confidence            665543110000                                   0                           00012


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC------CCcCc
Q psy11727        402 KFKDLILRMLTYDPKKRISPTNVLRH------EFFLK  432 (437)
Q Consensus       402 ~~~dli~~~L~~dP~~R~t~~e~l~H------p~~~~  432 (437)
                      .+.+||.+||+.||.+|||+.|+++|      |+|++
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~  304 (322)
T 1p4o_A          268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  304 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence            57899999999999999999999986      66654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.3e-42  Score=338.73  Aligned_cols=249  Identities=26%  Similarity=0.323  Sum_probs=199.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEE--EEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQV--AIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~v--aiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||.||+|.+..++..+  |+|.+...  ......+..|+.++..+.    .||||+++++++.+.+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRG   99 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC----CCTTBCCEEEEEEETT
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc----CCCchhhhceeeeeCC
Confidence            478999999999999999999999888865  99998642  223455667777776653    6899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS  249 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~  249 (437)
                      .+++||||+++ +|.+++....              ...+++..++.++.||+.||+|||++  ||+||||||+|||+  
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dlkp~NIl~--  175 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--QFIHRDLAARNILV--  175 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCccceEEE--
Confidence            99999999955 8999987643              24689999999999999999999964  89999999999999  


Q ss_pred             CCCCCEEEEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        250 PKRSAIKIIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       250 ~~~~~ikL~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      +.++.+||+|||++......  .....++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+.
T Consensus       176 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~  255 (327)
T 1fvr_A          176 GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  255 (327)
T ss_dssp             CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG
T ss_pred             cCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh
Confidence            67788999999999754322  223456788999999998889999999999999999998 999999988766655442


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .....+.                                   +                           ......+.+|
T Consensus       256 ~~~~~~~-----------------------------------~---------------------------~~~~~~l~~l  273 (327)
T 1fvr_A          256 QGYRLEK-----------------------------------P---------------------------LNCDDEVYDL  273 (327)
T ss_dssp             GTCCCCC-----------------------------------C---------------------------TTBCHHHHHH
T ss_pred             cCCCCCC-----------------------------------C---------------------------CCCCHHHHHH
Confidence            2110000                                   0                           0001257899


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~H  427 (437)
                      |.+||+.||.+|||++++++|
T Consensus       274 i~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          274 MRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.9e-41  Score=320.47  Aligned_cols=246  Identities=20%  Similarity=0.220  Sum_probs=195.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      .++|.+.+.||+|+||+||+|.+.  +..||+|++......   ...+..|+.++     ..+.||||+++++++.+.  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l-----~~l~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRL-----RIFSHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGG-----CCCSCTTEECEEEEECTTTS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHH-----HhcCCCchhheEEEEccCCC
Confidence            578999999999999999999874  889999999754321   12233344333     445799999999999877  


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++.......+++..++.++.||+.||+|||+++.+|+||||||+|||+  +.++.++|+|||+
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~--~~~~~~~l~~~~~  159 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI--DEDMTARISMADV  159 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE--CTTSCEEEEGGGS
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE--cCCcceeEEeccc
Confidence            789999999965 9999998766556999999999999999999999653339999999999999  6788899998888


Q ss_pred             ceecCCccccccccccccChhhhcCCCCCC---cchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        263 SCHVGQTLYQYIQSRYYRSPEVLLGIPYDL---AIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       263 s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      +.....  ....||+.|+|||++.+..++.   ++|||||||++|+|++|+.||.+.+..+....+......++.     
T Consensus       160 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----  232 (271)
T 3kmu_A          160 KFSFQS--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI-----  232 (271)
T ss_dssp             CCTTSC--TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC-----
T ss_pred             eeeecc--cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC-----
Confidence            754332  3457899999999998866554   799999999999999999999998877766655432111100     


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                   |                           ......+.+||.+||+.||.+||
T Consensus       233 -----------------------------~---------------------------~~~~~~~~~li~~~l~~~p~~Rp  256 (271)
T 3kmu_A          233 -----------------------------P---------------------------PGISPHVSKLMKICMNEDPAKRP  256 (271)
T ss_dssp             -----------------------------C---------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             -----------------------------C---------------------------CCCCHHHHHHHHHHcCCChhhCc
Confidence                                         0                           00012578999999999999999


Q ss_pred             CHHHHhc
Q psy11727        420 SPTNVLR  426 (437)
Q Consensus       420 t~~e~l~  426 (437)
                      |++++++
T Consensus       257 s~~~il~  263 (271)
T 3kmu_A          257 KFDMIVP  263 (271)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=9.8e-43  Score=338.75  Aligned_cols=207  Identities=22%  Similarity=0.296  Sum_probs=172.2

Q ss_pred             eecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       102 ~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ........++|++.+.||+|+||+||+|.+ .+++.||||++..... ....+.+|+.++..+     .||||+++++++
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  104 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFC-----RHPHLVSLIGFC  104 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-----CCTTBCCEEEEC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEE
Confidence            334455678999999999999999999986 4688999999864432 234455666665544     799999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNF--HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~--~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      ...+..++||||+++ +|.+++.....  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~ivH~dlkp~Nil~--~~~~~~kl  180 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILL--DENFVPKI  180 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCSTTEEE--CTTCCEEE
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC--CeecCCCCHHHEEE--CCCCCEEE
Confidence            999999999999965 88888765432  3489999999999999999999964  89999999999999  77889999


Q ss_pred             EeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        258 IDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       258 ~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      +|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+...
T Consensus       181 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~  246 (321)
T 2qkw_B          181 TDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP  246 (321)
T ss_dssp             CCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS
T ss_pred             eecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc
Confidence            999999764321     2234689999999999988999999999999999999999999986543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.3e-42  Score=336.96  Aligned_cols=249  Identities=24%  Similarity=0.343  Sum_probs=201.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-------CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-------~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|.+.+.||+|+||+||+|.+.       .++..||||++....  .....+..|+.++..+.    .||||++++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~  109 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA  109 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh----cCCCEeeEEEE
Confidence            578999999999999999999875       467789999997432  22345667888888874    68999999999


Q ss_pred             eeECCEEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +...+.+++||||+++ +|.+++.....              ..+++..++.++.||+.||+|||++  ||+||||||+|
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~N  187 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--KCIHRDLAARN  187 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGG
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCccce
Confidence            9999999999999965 89999876532              2489999999999999999999964  89999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+.
T Consensus       188 Ill--~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  265 (334)
T 2pvf_A          188 VLV--TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV  265 (334)
T ss_dssp             EEE--CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             EEE--cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence            999  67889999999999876432     123456788999999998889999999999999999999 9999999887


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+....+......+..                                                              ..
T Consensus       266 ~~~~~~~~~~~~~~~~--------------------------------------------------------------~~  283 (334)
T 2pvf_A          266 EELFKLLKEGHRMDKP--------------------------------------------------------------AN  283 (334)
T ss_dssp             HHHHHHHHHTCCCCCC--------------------------------------------------------------TT
T ss_pred             HHHHHHHhcCCCCCCC--------------------------------------------------------------cc
Confidence            7766655442111000                                                              00


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ....+.+||.+||+.||.+|||+.|++++
T Consensus       284 ~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          284 CTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            01257899999999999999999999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3e-42  Score=328.19  Aligned_cols=247  Identities=20%  Similarity=0.300  Sum_probs=201.9

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ...++|++.+.||+|+||+||+|.+. ++..||+|++.........+..|+.++..+     .||||+++++++. .+..
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVT-QEPI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEC-SSSC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhC-----CCcCcceEEEEEc-CCCc
Confidence            34578999999999999999999875 567899999986655566778899988887     6899999999876 4568


Q ss_pred             EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++|||++. ++|.+++.......+++..+..++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++..
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~i~H~dikp~Nil~--~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--NYIHRDLRAANILV--SDTLSCKIADFGLARL  158 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTSCEEECCCTTCEE
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC--CeeccCCCHhhEEE--cCCCCEEECCCccccc
Confidence            99999995 5899988754333589999999999999999999964  89999999999999  6788899999999987


Q ss_pred             cCCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        266 VGQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       266 ~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ......    ...++..|+|||++.+..++.++|||||||++|+|++ |++||.+.+..+....+......+..      
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------  232 (279)
T 1qpc_A          159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP------  232 (279)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC------
T ss_pred             ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCc------
Confidence            654322    2345678999999998889999999999999999999 99999998877666655332110000      


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                              ......+.+||.+||+.||.+|||
T Consensus       233 --------------------------------------------------------~~~~~~l~~li~~~l~~~p~~Rps  256 (279)
T 1qpc_A          233 --------------------------------------------------------DNCPEELYQLMRLCWKERPEDRPT  256 (279)
T ss_dssp             --------------------------------------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             --------------------------------------------------------ccccHHHHHHHHHHhccChhhCCC
Confidence                                                                    000125789999999999999999


Q ss_pred             HHHHhc
Q psy11727        421 PTNVLR  426 (437)
Q Consensus       421 ~~e~l~  426 (437)
                      ++++++
T Consensus       257 ~~~l~~  262 (279)
T 1qpc_A          257 FDYLRS  262 (279)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=9.2e-43  Score=339.81  Aligned_cols=256  Identities=20%  Similarity=0.246  Sum_probs=200.2

Q ss_pred             eeccCeeeeceecccCceEEEEEE-----EcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAF-----DHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~-----~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      ...++|.+.+.||+|+||.||+|.     +..++..||||++....  .....+..|+.++..+     .||||++++++
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~  101 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQNIVRCIGV  101 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-----CCCCCCeEEEE
Confidence            346789999999999999999998     55678899999996432  2233456677777766     78999999999


Q ss_pred             eeECCEEEEEEEecc-CcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CC
Q psy11727        180 FTWKNHLCLVFELLS-YNLYNLIRNTNF-----HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KR  252 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~-~~L~~~l~~~~~-----~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~  252 (437)
                      +...+..++||||++ ++|.+++.....     ..+++..++.++.||+.||.|||++  ||+||||||+|||++.+ ..
T Consensus       102 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~--~i~H~dlkp~NIli~~~~~~  179 (327)
T 2yfx_A          102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--HFIHRDIAARNCLLTCPGPG  179 (327)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESCSSTT
T ss_pred             EcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC--CeecCcCCHhHEEEecCCCc
Confidence            999999999999995 589999976532     3489999999999999999999964  89999999999999432 34


Q ss_pred             CCEEEEeCCCceecCC-----ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q psy11727        253 SAIKIIDFGSSCHVGQ-----TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKII  326 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~  326 (437)
                      ..+||+|||++.....     ......+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+.
T Consensus       180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  259 (327)
T 2yfx_A          180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  259 (327)
T ss_dssp             CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             ceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence            5699999999865422     1233567889999999998899999999999999999998 999999888776665554


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      .....++.                                                              ......+.+|
T Consensus       260 ~~~~~~~~--------------------------------------------------------------~~~~~~l~~l  277 (327)
T 2yfx_A          260 SGGRMDPP--------------------------------------------------------------KNCPGPVYRI  277 (327)
T ss_dssp             TTCCCCCC--------------------------------------------------------------TTCCHHHHHH
T ss_pred             cCCCCCCC--------------------------------------------------------------CCCCHHHHHH
Confidence            32111000                                                              0001257899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~Hp~~~  431 (437)
                      |.+||+.||.+|||+.++++|.|+-
T Consensus       278 i~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          278 MTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999999998763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=2.5e-43  Score=343.37  Aligned_cols=207  Identities=24%  Similarity=0.306  Sum_probs=171.9

Q ss_pred             ceeecCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       100 ~~~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      +.........++|.+.+.||+|+||+||+|.+ .+++.||||++.....  ....+..|+.++..+     .||||++++
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~   93 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-----VHRNLLRLR   93 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTC-----CCTTBCCCC
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-----cCCCccceE
Confidence            44445556678999999999999999999974 4688999999874322  223566677666554     789999999


Q ss_pred             ceeeECCEEEEEEEeccC-cHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhcCC-CCCeeeCCCCCCcEEEecCCCC
Q psy11727        178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNF--HGVSLNLTKKFAQQLCCALAFLSSP-ELSIIHCDLKPENILLCSPKRS  253 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~--~~ls~~~~~~i~~qi~~aL~~LH~~-~~giiHrDiKp~NIll~~~~~~  253 (437)
                      +++...+..++||||+.+ +|.+++.....  ..+++..+..++.||+.||+|||++ ..||+||||||+|||+  +.++
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~--~~~~  171 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL--DEEF  171 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE--CTTC
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE--CCCC
Confidence            999999999999999965 89999876532  3489999999999999999999964 1289999999999999  6788


Q ss_pred             CEEEEeCCCceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        254 AIKIIDFGSSCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       254 ~ikL~DFG~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      .+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|++||.
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            9999999999865422    233568999999999998889999999999999999999999996

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.4e-42  Score=331.77  Aligned_cols=197  Identities=31%  Similarity=0.461  Sum_probs=159.1

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+  .++.||||++... .....+..|+.++..+     .||||+++++++.  +..++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~--~~~~l   76 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-SERKAFIVELRQLSRV-----NHPNIVKLYGACL--NPVCL   76 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-THHHHHHHHHHHHHHC-----CCTTBCCEEEBCT--TTTEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-hHHHHHHHHHHHHhcC-----CCCCcCeEEEEEc--CCcEE
Confidence            46899999999999999999986  4788999999643 3345677788888776     6899999999887  34789


Q ss_pred             EEEeccC-cHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhcCCC-CCeeeCCCCCCcEEEecCCCCC-EEEEeCCCce
Q psy11727        189 VFELLSY-NLYNLIRNTNF-HGVSLNLTKKFAQQLCCALAFLSSPE-LSIIHCDLKPENILLCSPKRSA-IKIIDFGSSC  264 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~-~~ls~~~~~~i~~qi~~aL~~LH~~~-~giiHrDiKp~NIll~~~~~~~-ikL~DFG~s~  264 (437)
                      ||||+++ +|.+++..... ..+++..+..++.||+.||+|||+.+ .||+||||||+|||++  .++. +||+|||++.
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGTAC  154 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE--TTTTEEEECCCCC--
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe--CCCCEEEEccccccc
Confidence            9999965 89999876532 24789999999999999999999732 5899999999999994  4554 7999999998


Q ss_pred             ecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      ..........||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  207 (307)
T 2eva_A          155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG  207 (307)
T ss_dssp             ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC
T ss_pred             ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC
Confidence            77666666789999999999999999999999999999999999999998643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.3e-42  Score=333.47  Aligned_cols=200  Identities=26%  Similarity=0.389  Sum_probs=165.6

Q ss_pred             eeccCeeeeceecccCceEEEEEE----EcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ...++|++.+.||+|+||+||+|.    +..+++.||||++..... ....+.+|+.++..+     .||||+++++++.
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~   81 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QHDNIVKYKGVCY   81 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEe
Confidence            346789999999999999999998    567899999999975432 234566788887776     6899999999886


Q ss_pred             E--CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        182 W--KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       182 ~--~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      .  ..++++||||+++ +|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dikp~Nil~--~~~~~~kl~  156 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK--RYIHRDLATRNILV--ENENRVKIG  156 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEEC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC--CcccCCCCHhhEEE--cCCCeEEEc
Confidence            4  4578999999955 8999987654 3589999999999999999999964  89999999999999  567789999


Q ss_pred             eCCCceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        259 DFGSSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       259 DFG~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      |||++......      .....++..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  220 (295)
T 3ugc_A          157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP  220 (295)
T ss_dssp             CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred             cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence            99999765432      12234677899999999999999999999999999999999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1e-42  Score=346.13  Aligned_cols=246  Identities=22%  Similarity=0.296  Sum_probs=189.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEc---CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~---~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|.+.+.||+|+||+||+|.+.   .++..||||+++...  .....+..|+.++..+     .||||+++++++.+.
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~  118 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-----DHPNIIRLEGVVTKS  118 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeC
Confidence            568999999999999999999876   467789999997432  1223455677666655     799999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++||||++ ++|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dlkp~NIll--~~~~~~kl~Dfg~  193 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARNILI--NSNLVCKVSDFGL  193 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEECCC--
T ss_pred             CceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC--CeeCCCCCcceEEE--cCCCCEEECcCcc
Confidence            99999999995 58999987653 4589999999999999999999964  89999999999999  7788999999999


Q ss_pred             ceecCCccc------cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQTLY------QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +........      ...++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+......++..
T Consensus       194 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~  273 (373)
T 2qol_A          194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPM  273 (373)
T ss_dssp             --------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCT
T ss_pred             ccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            976643211      1234678999999999999999999999999999998 999999888777666554322111100


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                    .....+.+||.+||+.||
T Consensus       274 --------------------------------------------------------------~~~~~l~~li~~cl~~dp  291 (373)
T 2qol_A          274 --------------------------------------------------------------DCPAALYQLMLDCWQKDR  291 (373)
T ss_dssp             --------------------------------------------------------------TCBHHHHHHHHHHTCSSG
T ss_pred             --------------------------------------------------------------cccHHHHHHHHHHhCcCh
Confidence                                                                          001257899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+|||+.++++
T Consensus       292 ~~RPs~~~i~~  302 (373)
T 2qol_A          292 NNRPKFEQIVS  302 (373)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.3e-43  Score=355.51  Aligned_cols=253  Identities=17%  Similarity=0.189  Sum_probs=191.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcC-----------CCCCcE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKAD-----------IHSRYI  173 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~-----------~~h~~i  173 (437)
                      ...|.+.+.||+|+||+||+|.+..+|+.||||++....    .....+.+|..++..+.+..           +....+
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            345889999999999999999999999999999987322    22456677887777665411           000112


Q ss_pred             EEec------ceeeE-----CCEEEEEEEeccCcHHHHHH-----hcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeee
Q psy11727        174 VKLK------GHFTW-----KNHLCLVFELLSYNLYNLIR-----NTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIH  237 (437)
Q Consensus       174 v~l~------~~~~~-----~~~~~lV~E~~~~~L~~~l~-----~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiH  237 (437)
                      +.+.      ..+..     ...++++|+++.++|.+++.     ......+++..+..++.||+.||+|||++  ||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~iiH  234 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY--GLVH  234 (413)
T ss_dssp             EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT--TEEC
T ss_pred             cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC--Cccc
Confidence            2221      11121     23578999999999998885     22223478889999999999999999964  8999


Q ss_pred             CCCCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccccChhhh----------cCCCCCCcchHHHHHHHHHHHH
Q psy11727        238 CDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL----------LGIPYDLAIDMWSLGCILVELH  307 (437)
Q Consensus       238 rDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlG~il~ell  307 (437)
                      |||||+|||+  +.++.+||+|||+++..+......+| +.|+|||++          .+..++.++|||||||++|||+
T Consensus       235 rDiKp~NILl--~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          235 TYLRPVDIVL--DQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             SCCCGGGEEE--CTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             CCcccceEEE--ecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            9999999999  67888999999999988877777888 999999999          5666889999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCC
Q psy11727        308 TGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG  387 (437)
Q Consensus       308 tg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (437)
                      +|+.||.+.+.......+                     +..                     ..               
T Consensus       312 tg~~Pf~~~~~~~~~~~~---------------------~~~---------------------~~---------------  334 (413)
T 3dzo_A          312 CADLPNTDDAALGGSEWI---------------------FRS---------------------CK---------------  334 (413)
T ss_dssp             HSSCCCCTTGGGSCSGGG---------------------GSS---------------------CC---------------
T ss_pred             HCCCCCCCcchhhhHHHH---------------------Hhh---------------------cc---------------
Confidence            999999875432110000                     000                     00               


Q ss_pred             CCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       388 ~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                            ..    ...+.+||.+||+.||.+|||+.++++||||++.
T Consensus       335 ------~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          335 ------NI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             ------CC----CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ------cC----CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence                  00    0257999999999999999999999999999753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.1e-42  Score=327.72  Aligned_cols=247  Identities=23%  Similarity=0.296  Sum_probs=198.1

Q ss_pred             ccCeeeec-eecccCceEEEEEEEc--CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDT-LLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~-~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|.+.+ .||+|+||+||+|.+.  .++..||||+++...  .....+..|+.++..+     .||||+++++++ ..
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~-~~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVC-QA   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE-ES
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEe-cC
Confidence            45677776 9999999999999854  468889999997532  2344566788888776     689999999998 55


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++|||++++ +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||+
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~i~H~dlkp~Nili--~~~~~~kl~Dfg~  156 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK--NFVHRDLAARNVLL--VNRHYAKISDFGL  156 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--EETTEEEECCCTT
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHC--CEeeCCCchheEEE--cCCCCEEECcccc
Confidence            679999999976 8888886543 4699999999999999999999964  89999999999999  5677899999999


Q ss_pred             ceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |++||.+.+..+....+......+.  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~--  234 (287)
T 1u59_A          157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC--  234 (287)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCC--
T ss_pred             eeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCC--
Confidence            98764321      22345788999999998889999999999999999999 9999998887666655533110000  


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                       |                           ......+.+||.+||+.||
T Consensus       235 ---------------------------------~---------------------------~~~~~~l~~li~~~l~~~p  254 (287)
T 1u59_A          235 ---------------------------------P---------------------------PECPPELYALMSDCWIYKW  254 (287)
T ss_dssp             ---------------------------------C---------------------------TTCCHHHHHHHHHTTCSSG
T ss_pred             ---------------------------------C---------------------------CCcCHHHHHHHHHHcCCCh
Confidence                                             0                           0001267899999999999


Q ss_pred             CCCCCHHHHhcCC
Q psy11727        416 KKRISPTNVLRHE  428 (437)
Q Consensus       416 ~~R~t~~e~l~Hp  428 (437)
                      .+|||+.++++|.
T Consensus       255 ~~Rps~~~l~~~l  267 (287)
T 1u59_A          255 EDRPDFLTVEQRM  267 (287)
T ss_dssp             GGSCCHHHHHHHH
T ss_pred             hhCcCHHHHHHHH
Confidence            9999999999764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.4e-41  Score=328.77  Aligned_cols=202  Identities=26%  Similarity=0.447  Sum_probs=160.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ....++|++.+.||+|+||.||+|.+..+++.||||++.....    ....+..|+.++..+     .|+||+++++++.
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~  102 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFI  102 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEE
Confidence            3446789999999999999999999999999999999974321    223455677776665     7899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      ..+..++|||++.+ +|.+++...  ....+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~NIl~--~~~~~~kl~  178 (310)
T 2wqm_A          103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR--RVMHRDIKPANVFI--TATGVVKLG  178 (310)
T ss_dssp             ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEEC
T ss_pred             cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC--CeeCCCCcHHHEEE--cCCCCEEEE
Confidence            99999999999976 898888642  234589999999999999999999964  89999999999999  678899999


Q ss_pred             eCCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        259 DFGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       259 DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      |||++......   .....|++.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       179 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          179 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             CC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             eccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            99998765432   23457899999999999999999999999999999999999999764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-41  Score=333.59  Aligned_cols=249  Identities=19%  Similarity=0.269  Sum_probs=194.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCC----eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEK----CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      ...++|.+.+.||+|+||+||+|.+..++    ..||||+++....  ....+..|+.++..+     .||||+++++++
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  115 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGVI  115 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEE
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            34578999999999999999999876553    4699999974322  123455677766655     789999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      ...+..++||||+++ +|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|
T Consensus       116 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~--~~~~~~kl~D  190 (333)
T 1mqb_A          116 SKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM--NYVHRDLAARNILV--NSNLVCKVSD  190 (333)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEECC
T ss_pred             ecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChheEEE--CCCCcEEECC
Confidence            999999999999976 8988887643 4699999999999999999999964  89999999999999  6788999999


Q ss_pred             CCCceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        260 FGSSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       260 FG~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      ||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+......+
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~  270 (333)
T 1mqb_A          191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP  270 (333)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC
T ss_pred             CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCC
Confidence            99997654321      12345678999999999999999999999999999999 999999888777666654321111


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ...                                                              .....+.+||.+||+
T Consensus       271 ~~~--------------------------------------------------------------~~~~~l~~li~~~l~  288 (333)
T 1mqb_A          271 TPM--------------------------------------------------------------DCPSAIYQLMMQCWQ  288 (333)
T ss_dssp             CCT--------------------------------------------------------------TCBHHHHHHHHHHTC
T ss_pred             Ccc--------------------------------------------------------------cCCHHHHHHHHHHcC
Confidence            100                                                              001257899999999


Q ss_pred             cCCCCCCCHHHHhcC
Q psy11727        413 YDPKKRISPTNVLRH  427 (437)
Q Consensus       413 ~dP~~R~t~~e~l~H  427 (437)
                      .||.+|||+.+++++
T Consensus       289 ~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          289 QERARRPKFADIVSI  303 (333)
T ss_dssp             SSTTTSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998763

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-42  Score=336.11  Aligned_cols=245  Identities=19%  Similarity=0.266  Sum_probs=190.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEE----EEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQV----AIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~v----aiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|++.+.||+|+||+||+|.+..+++.|    |+|.+...  ......+..|+.++..+     .||||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLT   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-----CBTTBCCCCEEEES
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEEec
Confidence            468999999999999999999998887755    66766432  22345666787777665     68999999999987


Q ss_pred             CCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+ .++|+|++. ++|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~Dikp~NIl~--~~~~~~kL~DfG  162 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR--RLVHRDLAARNVLV--KTPQHVKITDFG  162 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--EETTEEEECCTT
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC--CCcCCCCCHHHEEE--cCCCCEEEccCc
Confidence            65 778888885 58999887754 4689999999999999999999964  89999999999999  567789999999


Q ss_pred             CceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        262 SSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       262 ~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ++.......     ....+|..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+.. 
T Consensus       163 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~-  241 (327)
T 3lzb_A          163 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-  241 (327)
T ss_dssp             C----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-
T ss_pred             ceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-
Confidence            997653321     23445778999999999999999999999999999999 99999988776655544332111110 


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                   ......+.+||.+||..||
T Consensus       242 -------------------------------------------------------------~~~~~~l~~li~~~l~~dp  260 (327)
T 3lzb_A          242 -------------------------------------------------------------PICTIDVYMIMRKCWMIDA  260 (327)
T ss_dssp             -------------------------------------------------------------TTBCHHHHHHHHHHTCSSG
T ss_pred             -------------------------------------------------------------ccCCHHHHHHHHHHcCCCh
Confidence                                                                         0001157899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+|||+.|+++
T Consensus       261 ~~Rps~~ell~  271 (327)
T 3lzb_A          261 DSRPKFRELII  271 (327)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.3e-42  Score=335.00  Aligned_cols=196  Identities=22%  Similarity=0.259  Sum_probs=160.1

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ....+.++|++.+.||+|+||.||+|.+.  ++.||||++....  ......|..++..   ....|+||+++++++...
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~e~~~~~~---~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EASWFRETEIYQT---VLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHHHHHHHHHHTS---TTCCCTTBCCEEEEEEES
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cchhhhHHHHHHH---HhhcCCCeeeEEEEEccC
Confidence            34456789999999999999999999874  8899999986432  2333344444333   235899999999999987


Q ss_pred             ----CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCC
Q psy11727        184 ----NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       184 ----~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~  252 (437)
                          ..+++||||+.+ +|.+++...   .+++..++.++.|++.||+|||++      ..||+||||||+|||+  +.+
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill--~~~  178 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV--KKN  178 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE--CTT
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE--CCC
Confidence                799999999965 899999765   489999999999999999999965      2389999999999999  678


Q ss_pred             CCEEEEeCCCceecCCcc-------ccccccccccChhhhcCCCCCCc------chHHHHHHHHHHHHhCCC
Q psy11727        253 SAIKIIDFGSSCHVGQTL-------YQYIQSRYYRSPEVLLGIPYDLA------IDMWSLGCILVELHTGEP  311 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlG~il~elltg~~  311 (437)
                      +.+||+|||++.......       ....||+.|+|||++.+..++..      +|||||||++|||++|..
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~  250 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV  250 (337)
T ss_dssp             SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred             CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence            899999999997653322       24578999999999988777665      999999999999999933

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=3.4e-42  Score=333.34  Aligned_cols=250  Identities=24%  Similarity=0.376  Sum_probs=199.2

Q ss_pred             ccCeeeeceecccCceEEEEEEE-----cCCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD-----HEEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~-----~~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|.+     ..+++.||||++.....  ....+..|+.++..+.    +||||+++++++.
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~  101 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT  101 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc----cCCCeeeEEEEEe
Confidence            57899999999999999999985     35778999999975432  2335667888888874    6899999999988


Q ss_pred             ECC-EEEEEEEeccC-cHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        182 WKN-HLCLVFELLSY-NLYNLIRNTNF--------------HGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       182 ~~~-~~~lV~E~~~~-~L~~~l~~~~~--------------~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      ..+ .+++||||+++ +|.+++.....              ..+++..++.++.||+.||.|||++  ||+||||||+||
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--~i~H~dikp~Ni  179 (316)
T 2xir_A          102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNI  179 (316)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGE
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC--CcccccCccceE
Confidence            754 59999999975 89999876542              1288999999999999999999964  899999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV  319 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~  319 (437)
                      |+  +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....
T Consensus       180 l~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          180 LL--SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             EE--CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             EE--CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence            99  67788999999999765332     223467889999999999999999999999999999998 99999887644


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      +.+.........++                                  .+.                           ..
T Consensus       258 ~~~~~~~~~~~~~~----------------------------------~~~---------------------------~~  276 (316)
T 2xir_A          258 EEFCRRLKEGTRMR----------------------------------APD---------------------------YT  276 (316)
T ss_dssp             HHHHHHHHHTCCCC----------------------------------CCT---------------------------TC
T ss_pred             HHHHHHhccCccCC----------------------------------CCC---------------------------CC
Confidence            44333322211000                                  000                           00


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ...+.+||.+||+.||.+|||+.++++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1257899999999999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.7e-42  Score=351.74  Aligned_cols=252  Identities=21%  Similarity=0.312  Sum_probs=202.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ..++|++.+.||+|+||+||+|.+.. +..||||+++........+.+|+.++..+     .||||+++++++.+ +..+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~-~~~~  254 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPIY  254 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEcC-CceE
Confidence            35789999999999999999999865 46799999986554456788899999887     68999999999876 6789


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+.+ +|.+++.......+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++...
T Consensus       255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--~ivHrDlkp~Nill--~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--NYVHRDLRAANILV--GENLVCKVADFGLARLI  330 (452)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CGGGCEEECCCCTTC--
T ss_pred             EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCChhhEEE--CCCCCEEECCCccceec
Confidence            99999965 899999764434589999999999999999999964  89999999999999  67788999999999766


Q ss_pred             CCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....    ....++..|+|||++.+..++.++|||||||++|||++ |++||.+.+..+....+......+...      
T Consensus       331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~------  404 (452)
T 1fmk_A          331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP------  404 (452)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT------
T ss_pred             CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC------
Confidence            4322    22345678999999998899999999999999999999 999999988877776664432211100      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                              .....+.+||.+||+.||.+|||+
T Consensus       405 --------------------------------------------------------~~~~~l~~li~~cl~~dP~~Rpt~  428 (452)
T 1fmk_A          405 --------------------------------------------------------ECPESLHDLMCQCWRKEPEERPTF  428 (452)
T ss_dssp             --------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             --------------------------------------------------------CCCHHHHHHHHHHccCChhhCcCH
Confidence                                                                    001257899999999999999999


Q ss_pred             HHHhc--CCCcCc
Q psy11727        422 TNVLR--HEFFLK  432 (437)
Q Consensus       422 ~e~l~--Hp~~~~  432 (437)
                      +++++  +.+++.
T Consensus       429 ~~l~~~L~~~~~~  441 (452)
T 1fmk_A          429 EYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHHTTTSC
T ss_pred             HHHHHHHHHHhcc
Confidence            99986  466654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.9e-42  Score=329.50  Aligned_cols=244  Identities=21%  Similarity=0.307  Sum_probs=189.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC-CEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK-NHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~-~~~~  187 (437)
                      .++|++.+.||+|+||+||+|.+  +++.||||+++.. .....+..|+.++..+     .||||+++++++... +..+
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-C--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch-hHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCCceE
Confidence            57899999999999999999976  4889999999743 3445667788777665     689999999986544 5789


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..++.++.||+.||+|||++  ||+||||||+||++  +.++.+||+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~~l~Dfg~~~~~  167 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEA  167 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CTTSCEEECCCCC----
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC--CccccCCCcceEEE--eCCCcEEEeeccccccc
Confidence            99999976 899998765433479999999999999999999964  89999999999999  67889999999999877


Q ss_pred             CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        267 GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       267 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      ........++..|+|||++.+..++.++||||||+++|+|++ |.+||...+..+....+......+.            
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~------------  235 (278)
T 1byg_A          168 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA------------  235 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCC------------
T ss_pred             cccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC------------
Confidence            665556678899999999998899999999999999999998 9999988776555444422100000            


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                             +                           ......+.+||.+||+.||.+|||+.+++
T Consensus       236 -----------------------~---------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~  265 (278)
T 1byg_A          236 -----------------------P---------------------------DGCPPAVYEVMKNCWHLDAAMRPSFLQLR  265 (278)
T ss_dssp             -----------------------C---------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -----------------------c---------------------------ccCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence                                   0                           00012578999999999999999999987


Q ss_pred             c
Q psy11727        426 R  426 (437)
Q Consensus       426 ~  426 (437)
                      +
T Consensus       266 ~  266 (278)
T 1byg_A          266 E  266 (278)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.9e-42  Score=339.98  Aligned_cols=202  Identities=23%  Similarity=0.307  Sum_probs=170.1

Q ss_pred             ccCeeeeceecccCceEEEEE-----EEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~-----~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|.+.+.||+|+||+||+|     .+..+++.||||++...  ....+..|..+++.+..  ..|+||+++++++...
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~--~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP--SMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG--GGGGGBCCEEEEEECS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh--hhhhhhhhhheeeecC
Confidence            568999999999999999999     46778999999999743  34567788888888753  2588999999999999


Q ss_pred             CEEEEEEEecc-CcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec---------C
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNT---NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS---------P  250 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~---~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~---------~  250 (437)
                      +..|+||||++ |+|.+++...   ....+++..++.++.||+.||+|||++  |||||||||+|||++.         +
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC--EIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCSGGGEEECGGGTCC-----
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC--CeecCCCCHHHEEecccccCcccccc
Confidence            99999999996 5899988642   235699999999999999999999964  8999999999999942         1


Q ss_pred             CCCCEEEEeCCCceecC-----CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        251 KRSAIKIIDFGSSCHVG-----QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      .++.+||+|||+|....     ......+||+.|+|||++.+..|+.++|||||||++|||+||++||...
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence            17889999999997542     2334567999999999999999999999999999999999999999653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.3e-42  Score=336.43  Aligned_cols=253  Identities=23%  Similarity=0.317  Sum_probs=202.2

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCe-----EEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKC-----QVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      +...++|.+.+.||+|+||+||+|.+..++.     .||+|++....  .....+..|+.++..+.    .||||+++++
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~  117 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG----QHENIVNLLG  117 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEE
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc----CCCCeeeEEE
Confidence            3346789999999999999999999877654     79999997543  22345677888888874    6899999999


Q ss_pred             eeeECCEEEEEEEeccC-cHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        179 HFTWKNHLCLVFELLSY-NLYNLIRNTN------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       179 ~~~~~~~~~lV~E~~~~-~L~~~l~~~~------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      ++...+.+++||||+++ +|.+++....            ...+++..++.++.||+.||+|||++  ||+||||||+||
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~ivH~Dlkp~NI  195 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNV  195 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGC
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC--CcccCCcccceE
Confidence            99999999999999966 8999886532            23579999999999999999999964  899999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHH
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV  319 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~  319 (437)
                      |+  +.++.+||+|||++.......     ....+|..|+|||++.+..++.++|||||||++|+|++ |.+||.+....
T Consensus       196 l~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  273 (333)
T 2i1m_A          196 LL--TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN  273 (333)
T ss_dssp             EE--EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS
T ss_pred             EE--CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh
Confidence            99  567789999999997653221     23456778999999999899999999999999999999 99999887655


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      .....+......++.                                  |                           ...
T Consensus       274 ~~~~~~~~~~~~~~~----------------------------------~---------------------------~~~  292 (333)
T 2i1m_A          274 SKFYKLVKDGYQMAQ----------------------------------P---------------------------AFA  292 (333)
T ss_dssp             HHHHHHHHHTCCCCC----------------------------------C---------------------------TTC
T ss_pred             HHHHHHHhcCCCCCC----------------------------------C---------------------------CCC
Confidence            555444432111100                                  0                           000


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ...+.+||.+||+.||.+|||+.|++++
T Consensus       293 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          293 PKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            1257899999999999999999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.7e-42  Score=326.78  Aligned_cols=247  Identities=23%  Similarity=0.298  Sum_probs=196.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcC---CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..++|.+.+.||+|+||+||+|.+..   ++..||+|++....  .....+.+|+.++..+     .||||+++++++.+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   84 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-----DHPHIVKLIGIIEE   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-----CCTTBCCEEEEECS
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-----CCCCcceEEEEEcC
Confidence            35789999999999999999998654   34569999987542  2235567788888887     68999999999875


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       +..++|||++++ +|.+++.... ..+++..+..++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        85 -~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dlkp~Nil~--~~~~~~kl~Dfg  158 (281)
T 3cc6_A           85 -EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI--NCVHRDIAVRNILV--ASPECVKLGDFG  158 (281)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEE--EETTEEEECCCC
T ss_pred             -CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC--CcccCCCccceEEE--CCCCcEEeCccC
Confidence             456899999965 8999887654 4589999999999999999999964  89999999999999  557789999999


Q ss_pred             CceecCCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        262 SSCHVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       262 ~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ++.......    ....++..|+|||++.+..++.++|||||||++|+|++ |++||...+..+....+......+... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~-  237 (281)
T 3cc6_A          159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-  237 (281)
T ss_dssp             GGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT-
T ss_pred             CCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC-
Confidence            997654322    23456788999999998899999999999999999998 999998877666655554321111100 


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                   .....+.+||.+||+.||.
T Consensus       238 -------------------------------------------------------------~~~~~l~~li~~~l~~~p~  256 (281)
T 3cc6_A          238 -------------------------------------------------------------LCPPVLYTLMTRCWDYDPS  256 (281)
T ss_dssp             -------------------------------------------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred             -------------------------------------------------------------CCCHHHHHHHHHHccCCch
Confidence                                                                         0012578999999999999


Q ss_pred             CCCCHHHHhcC
Q psy11727        417 KRISPTNVLRH  427 (437)
Q Consensus       417 ~R~t~~e~l~H  427 (437)
                      +|||+.|++++
T Consensus       257 ~Rps~~ell~~  267 (281)
T 3cc6_A          257 DRPRFTELVCS  267 (281)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.5e-41  Score=326.97  Aligned_cols=197  Identities=27%  Similarity=0.391  Sum_probs=166.5

Q ss_pred             ccCeeeeceecccCceEEEEEE----EcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ..+|++.+.||+|+||.||+|.    +..+++.||+|++....  .....+..|+.++..+     .|+||+++++++..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKYKGICTE   94 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCeeeeeeEEec
Confidence            5679999999999999999998    56789999999997432  2235667788888776     68999999999987


Q ss_pred             C--CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        183 K--NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       183 ~--~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      .  +.+++||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dikp~Nil~--~~~~~~kl~D  169 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR--QYVHRDLAARNVLV--ESEHQVKIGD  169 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--EETTEEEECC
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC--CcccCCCchheEEE--cCCCCEEECc
Confidence            6  679999999965 8999986654 4589999999999999999999964  89999999999999  5677899999


Q ss_pred             CCCceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        260 FGSSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       260 FG~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      ||++......      .....||..|+|||++.+..++.++|||||||++|+|++|..|+..
T Consensus       170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  231 (302)
T 4e5w_A          170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS  231 (302)
T ss_dssp             CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence            9999876432      2234677889999999998999999999999999999999998753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=8e-42  Score=327.37  Aligned_cols=252  Identities=27%  Similarity=0.363  Sum_probs=187.4

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .++...++|++.+.||+|+||+||+|.+..   .||+|+++.....   ...+..|+.+++.+     .|+||+++++++
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~   89 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYS   89 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-----CCCcEEEEEeec
Confidence            345567889999999999999999997533   5999999744322   23455677666655     789999999954


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                       ..+..++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|
T Consensus        90 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~--~i~H~Dlkp~Nil~--~~~~~~kl~D  163 (289)
T 3og7_A           90 -TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK--SIIHRDLKSNNIFL--HEDNTVKIGD  163 (289)
T ss_dssp             -CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--ETTTEEEECC
T ss_pred             -cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CcccccCccceEEE--CCCCCEEEcc
Confidence             56678999999965 8888886543 4689999999999999999999964  89999999999999  5678899999


Q ss_pred             CCCceecCC-----ccccccccccccChhhhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q psy11727        260 FGSSCHVGQ-----TLYQYIQSRYYRSPEVLL---GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGM  331 (437)
Q Consensus       260 FG~s~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  331 (437)
                      ||++.....     ......||+.|+|||++.   +..++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus       164 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  243 (289)
T 3og7_A          164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL  243 (289)
T ss_dssp             CC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC
T ss_pred             ceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc
Confidence            999975532     223457899999999997   567889999999999999999999999987766665555543222


Q ss_pred             CChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcc
Q psy11727        332 PPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML  411 (437)
Q Consensus       332 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L  411 (437)
                      ++...            .                                             ........+.+||.+||
T Consensus       244 ~~~~~------------~---------------------------------------------~~~~~~~~l~~li~~~l  266 (289)
T 3og7_A          244 SPDLS------------K---------------------------------------------VRSNCPKRMKRLMAECL  266 (289)
T ss_dssp             CCCTT------------S---------------------------------------------SCTTSCHHHHHHHHHHT
T ss_pred             Ccchh------------h---------------------------------------------ccccCCHHHHHHHHHHc
Confidence            21100            0                                             00000126899999999


Q ss_pred             ccCCCCCCCHHHHhc
Q psy11727        412 TYDPKKRISPTNVLR  426 (437)
Q Consensus       412 ~~dP~~R~t~~e~l~  426 (437)
                      +.||.+|||+.++++
T Consensus       267 ~~~p~~Rps~~ell~  281 (289)
T 3og7_A          267 KKKRDERPSFPRILA  281 (289)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999985

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=340.12  Aligned_cols=193  Identities=23%  Similarity=0.295  Sum_probs=154.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-----C
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-----K  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-----~  183 (437)
                      .++|++.+.||+|+||.||+|..  +++.||||++....  ......|..+..   ...+.|+||+++++.+..     .
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~---~~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN--RQNFINEKNIYR---VPLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG--HHHHHHHHHHHT---STTCCCTTBCCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc--hhhHHHHHHHHH---HHhccCcchhhheecccccccCCC
Confidence            57899999999999999999965  68999999996432  233333433322   334589999999975542     3


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC-------CCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP-------ELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~-------~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      ..+++||||+++ +|.+++....   .++..+..++.||+.||+|||++       ..||+||||||+|||+  +.++.+
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill--~~~~~~  159 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV--KNDGTC  159 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE--CTTSCE
T ss_pred             ceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE--cCCCcE
Confidence            478999999954 8999987654   58999999999999999999964       1289999999999999  677899


Q ss_pred             EEEeCCCceecCCc-----------cccccccccccChhhhcC-------CCCCCcchHHHHHHHHHHHHhCCCCC
Q psy11727        256 KIIDFGSSCHVGQT-----------LYQYIQSRYYRSPEVLLG-------IPYDLAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       256 kL~DFG~s~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~elltg~~pf  313 (437)
                      ||+|||++......           .....||+.|+|||++.+       ..++.++|||||||++|||++|..||
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~  235 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL  235 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence            99999999765321           224578999999999987       35667899999999999999996554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2e-41  Score=324.84  Aligned_cols=244  Identities=23%  Similarity=0.324  Sum_probs=194.0

Q ss_pred             ccCeeeec-eecccCceEEEEEEE--cCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDT-LLGKGSFGQVVKAFD--HEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~-~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .++|.+.+ .||+|+||+||+|.+  ..+++.||||++.....   ....+..|+.++..+     .||||+++++++ .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGIC-E   88 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEEEE-E
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEE-C
Confidence            46799988 999999999999954  56788999999975422   234566677777766     689999999998 5


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+..++|||++++ +|.+++...  ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dikp~Nil~--~~~~~~kl~Dfg  162 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES--NFVHRDLAARNVLL--VTQHYAKISDFG  162 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--EETTEEEECCCT
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC--CeEcCCCCcceEEE--eCCCcEEEccCC
Confidence            6788999999975 899988765  3589999999999999999999964  89999999999999  557789999999


Q ss_pred             CceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ++.......      ....++..|+|||++.+..++.++||||||+++|+|++ |+.||.+.+..+....+......+. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-  241 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC-  241 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence            997764322      12345688999999998889999999999999999999 9999999887666555432110000 


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                        |                           ......+.+||.+||+.|
T Consensus       242 ----------------------------------~---------------------------~~~~~~l~~li~~~l~~d  260 (291)
T 1xbb_A          242 ----------------------------------P---------------------------AGCPREMYDLMNLCWTYD  260 (291)
T ss_dssp             ----------------------------------C---------------------------TTCCHHHHHHHHHHTCSS
T ss_pred             ----------------------------------C---------------------------CCCCHHHHHHHHHHcCCC
Confidence                                              0                           000125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.++++
T Consensus       261 p~~Rps~~~l~~  272 (291)
T 1xbb_A          261 VENRPGFAAVEL  272 (291)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.2e-41  Score=327.76  Aligned_cols=249  Identities=17%  Similarity=0.252  Sum_probs=189.5

Q ss_pred             eccCeeeeceecccCceEEEEEEEcC---CCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~---~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..++|.+.+.||+|+||+||+|.+..   ++..||+|++.....   ....+..|+.++..+     .||||+++++++.
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~  106 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-----SHPNVIRLLGVCI  106 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEE
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-----CCCCeeeeeEEEe
Confidence            35689999999999999999998765   566899999874322   223455677776665     6899999999998


Q ss_pred             ECC-----EEEEEEEeccC-cHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC
Q psy11727        182 WKN-----HLCLVFELLSY-NLYNLIRNT----NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK  251 (437)
Q Consensus       182 ~~~-----~~~lV~E~~~~-~L~~~l~~~----~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~  251 (437)
                      ..+     ..++||||+.+ +|.+++...    ....+++..++.++.||+.||.|||++  ||+||||||+|||+  +.
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dikp~NIli--~~  182 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR--NFLHRDLAARNCML--RD  182 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT--TCCCCCCSGGGEEE--CT
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCcceEEE--cC
Confidence            655     45999999965 899888532    234589999999999999999999964  89999999999999  67


Q ss_pred             CCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy11727        252 RSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       252 ~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i  325 (437)
                      ++.+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+.......+
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  262 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL  262 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence            888999999999765332     123456788999999999999999999999999999999 99999988776665555


Q ss_pred             HHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD  405 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  405 (437)
                      ......+..                                                              ......+.+
T Consensus       263 ~~~~~~~~~--------------------------------------------------------------~~~~~~l~~  280 (313)
T 3brb_A          263 LHGHRLKQP--------------------------------------------------------------EDCLDELYE  280 (313)
T ss_dssp             HTTCCCCCB--------------------------------------------------------------TTCCHHHHH
T ss_pred             HcCCCCCCC--------------------------------------------------------------ccccHHHHH
Confidence            332110000                                                              000125789


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q psy11727        406 LILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       406 li~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ||.+||+.||.+|||+.++++|
T Consensus       281 li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          281 IMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-41  Score=324.27  Aligned_cols=244  Identities=20%  Similarity=0.263  Sum_probs=193.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCe---EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKC---QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .|.+.+.||+|+||+||+|.+..++.   .||+|++.....  ....+..|+.++..+     .||||+++++++.+.+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   96 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-----NHPNVLALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEECCSSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEecCCC
Confidence            57788999999999999998765544   799999974332  234455677777665     68999999999987665


Q ss_pred             E-EEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        186 L-CLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       186 ~-~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      . ++|||++. ++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||++
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~--~i~H~dikp~Nili--~~~~~~kl~Dfg~~  171 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ--KFVHRDLAARNCML--DESFTVKVADFGLA  171 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CTTCCEEECCTTSS
T ss_pred             CcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCcceEEE--cCCCcEEeCcCCCc
Confidence            4 99999995 58999887643 5689999999999999999999964  89999999999999  67889999999999


Q ss_pred             eecCCc-------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        264 CHVGQT-------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       264 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      ......       .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+......+...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (298)
T 3pls_A          172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE  251 (298)
T ss_dssp             CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT
T ss_pred             ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCc
Confidence            755332       223466889999999999999999999999999999999 567777766655555443321111000


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                    .....+.+||.+||+.||
T Consensus       252 --------------------------------------------------------------~~~~~l~~li~~~l~~~p  269 (298)
T 3pls_A          252 --------------------------------------------------------------YCPDSLYQVMQQCWEADP  269 (298)
T ss_dssp             --------------------------------------------------------------TCCHHHHHHHHHHTCSSG
T ss_pred             --------------------------------------------------------------cchHHHHHHHHHHccCCh
Confidence                                                                          001257899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+|||++++++
T Consensus       270 ~~Rps~~~ll~  280 (298)
T 3pls_A          270 AVRPTFRVLVG  280 (298)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.1e-41  Score=325.40  Aligned_cols=245  Identities=20%  Similarity=0.272  Sum_probs=192.9

Q ss_pred             cCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEeccee-eEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF-TWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~-~~~  183 (437)
                      .+|++.+.||+|+||+||+|.+..+   ...||+|.+.....  ....+..|+.+++.+     .||||+++++++ ...
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   99 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSE   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEECCSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeEEEcCC
Confidence            4699999999999999999986543   34689999874322  234456677777665     689999999985 456


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus       100 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~--~i~H~dikp~Nil~--~~~~~~kl~Dfg~  174 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK--KFVHRDLAARNCML--DEKFTVKVADFGL  174 (298)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CTTCCEEECSCGG
T ss_pred             CceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCchheEEE--CCCCCEEECcccc
Confidence            688999999966 8999987643 5689999999999999999999964  89999999999999  7788999999999


Q ss_pred             ceecCCc-------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        263 SCHVGQT-------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       263 s~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +......       .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+......+..
T Consensus       175 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T 3f66_A          175 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP  254 (298)
T ss_dssp             GCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC
T ss_pred             cccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC
Confidence            9765332       223456788999999999999999999999999999999 67888887766655554332111100


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      .                                                          .    ....+.+||.+||+.|
T Consensus       255 ~----------------------------------------------------------~----~~~~l~~li~~~l~~~  272 (298)
T 3f66_A          255 E----------------------------------------------------------Y----CPDPLYEVMLKCWHPK  272 (298)
T ss_dssp             T----------------------------------------------------------T----CCHHHHHHHHHHTCSS
T ss_pred             c----------------------------------------------------------c----CCHHHHHHHHHHcCCC
Confidence            0                                                          0    0125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||++|+++
T Consensus       273 p~~Rps~~ell~  284 (298)
T 3f66_A          273 AEMRPSFSELVS  284 (298)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999885

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-41  Score=354.38  Aligned_cols=253  Identities=22%  Similarity=0.320  Sum_probs=206.9

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ...++|++.+.||+|+||+||+|.+.. +..||||+++........+.+|+.+++.+     .|+||+++++++.+ +.+
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEee-ccc
Confidence            345789999999999999999999865 46799999986554556788899999887     68999999998876 678


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ||||||+.+ +|.+++.......+++..+..++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||++..
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--~ivHrDlkp~NIll--~~~~~~kl~DFG~a~~  412 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--NYVHRDLRAANILV--GENLVCKVADFGLARL  412 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CGGGCEEECCTTSTTT
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CeeCCCCCHhhEEE--cCCCcEEEccccccee
Confidence            999999965 899999764334589999999999999999999964  89999999999999  6778899999999976


Q ss_pred             cCCccc----cccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        266 VGQTLY----QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       266 ~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      ......    ...++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+.+..+.....++...     
T Consensus       413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~-----  487 (535)
T 2h8h_A          413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP-----  487 (535)
T ss_dssp             CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCT-----
T ss_pred             cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC-----
Confidence            643321    2345678999999998899999999999999999999 999999988877776664422211100     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                               .....+.+||.+||+.||.+|||
T Consensus       488 ---------------------------------------------------------~~~~~l~~li~~cl~~dP~~RPt  510 (535)
T 2h8h_A          488 ---------------------------------------------------------ECPESLHDLMCQCWRKEPEERPT  510 (535)
T ss_dssp             ---------------------------------------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ---------------------------------------------------------CCCHHHHHHHHHHcCCChhHCcC
Confidence                                                                     00125789999999999999999


Q ss_pred             HHHHhc--CCCcCc
Q psy11727        421 PTNVLR--HEFFLK  432 (437)
Q Consensus       421 ~~e~l~--Hp~~~~  432 (437)
                      ++++++  ..+|+.
T Consensus       511 ~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          511 FEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHHHHTSSCC
T ss_pred             HHHHHHHHHHHhhc
Confidence            999986  356553

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=328.40  Aligned_cols=198  Identities=24%  Similarity=0.293  Sum_probs=163.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE----C
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW----K  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~----~  183 (437)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.++..+     .||||+++++++..    .
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-----NHPNILRLVAYCLRERGAK  102 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEEEETTE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEEEeccCCC
Confidence            457999999999999999999999999999999986432 2334566777777665     78999999999873    3


Q ss_pred             CEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      ...++||||+.+ +|.+++...  ....+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--~ivH~dlkp~NIl~--~~~~~~kl~df  178 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKPTNILL--GDEGQPVLMDL  178 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTSCEEECCC
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCCCCHHHEEE--cCCCCEEEEec
Confidence            489999999966 899888753  235689999999999999999999964  89999999999999  67888999999


Q ss_pred             CCceecCCcc------------ccccccccccChhhhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        261 GSSCHVGQTL------------YQYIQSRYYRSPEVLLGIP---YDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       261 G~s~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      |++.......            ....||+.|+|||++.+..   ++.++|||||||++|+|++|+.||..
T Consensus       179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            9987653211            2345789999999998654   68999999999999999999999953

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.3e-41  Score=331.66  Aligned_cols=199  Identities=27%  Similarity=0.382  Sum_probs=168.4

Q ss_pred             ccCeeeeceecccCceEEEEEE----EcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceee--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT--  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~--  181 (437)
                      .++|++.+.||+|+||.||+|.    +..+++.||||++..... ....+.+|+.++..+     .|+||+++++++.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDFIVKYRGVSYGP   96 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-----CCCceeEEEEEEecC
Confidence            3689999999999999999998    567899999999975432 234467788887776     7899999999886  


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      +.+.+++||||++ ++|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--~ivH~Dikp~NIl~--~~~~~~kl~Df  171 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR--RCVHRDLAARNILV--ESEAHVKIADF  171 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--EETTEEEECCG
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC--CccCCCCChhhEEE--CCCCCEEEccc
Confidence            4568999999995 58999887643 3589999999999999999999964  89999999999999  56788999999


Q ss_pred             CCceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        261 GSSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       261 G~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      |++.......      ....+|..|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus       172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~  234 (327)
T 3lxl_A          172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS  234 (327)
T ss_dssp             GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred             ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence            9998764322      23457788999999999889999999999999999999999997643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.8e-41  Score=325.91  Aligned_cols=256  Identities=23%  Similarity=0.315  Sum_probs=196.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      |...+.||+|+||+||+|.+  +++.||+|++....     .....+.+|+.++..+     .||||+++++++.+.+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-----QHENLVELLGFSSDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEecCCce
Confidence            44558999999999999975  67899999986432     2235567788888877     689999999999999999


Q ss_pred             EEEEEecc-CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        187 CLVFELLS-YNLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       187 ~lV~E~~~-~~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ++||||++ ++|.+++.... ...+++..++.++.||+.||.|||++  ||+||||||+||++  +.++.+||+|||++.
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~i~H~dlkp~Nili--~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--HHIHRDIKSANILL--DEAFTAKISDFGLAR  181 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--CTTCCEEECCCTTCE
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEE--cCCCcEEEeeccccc
Confidence            99999995 58999887432 34589999999999999999999964  89999999999999  678899999999997


Q ss_pred             ecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        265 HVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       265 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      .....     .....||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+......+..+.+........    
T Consensus       182 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----  256 (307)
T 2nru_A          182 ASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT----  256 (307)
T ss_dssp             ECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCC----
T ss_pred             ccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhh----
Confidence            65432     223578999999999876 58999999999999999999999998765443333333221110000    


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                        +.+.+.          .............+.+||.+||+.||.+||
T Consensus       257 ----------------------------------~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  292 (307)
T 2nru_A          257 ----------------------------------IEDYID----------KKMNDADSTSVEAMYSVASQCLHEKKNKRP  292 (307)
T ss_dssp             ----------------------------------HHHHSC----------SSCSCCCHHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             ----------------------------------hhhhcc----------ccccccchHHHHHHHHHHHHHcCCCcccCc
Confidence                                              000000          000111223344689999999999999999


Q ss_pred             CHHHHhcC
Q psy11727        420 SPTNVLRH  427 (437)
Q Consensus       420 t~~e~l~H  427 (437)
                      |+.+++++
T Consensus       293 s~~~l~~~  300 (307)
T 2nru_A          293 DIKKVQQL  300 (307)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.9e-42  Score=363.63  Aligned_cols=280  Identities=22%  Similarity=0.260  Sum_probs=201.4

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++....  .....+..|+.++..+     .||||+++++++..   
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-----~HpnIV~l~~v~~~~~~   86 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-----NHPNVVSAREVPDGLQK   86 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-----CBTTBCCEEECCTTTCC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCceeeeeccccc
Confidence            3578999999999999999999999999999999986432  2234566788888877     68999999988765   


Q ss_pred             ---CCEEEEEEEecc-CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC-CCCEE
Q psy11727        183 ---KNHLCLVFELLS-YNLYNLIRNTN-FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK-RSAIK  256 (437)
Q Consensus       183 ---~~~~~lV~E~~~-~~L~~~l~~~~-~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~-~~~ik  256 (437)
                         .+..++||||++ ++|.+++.... ...+++..++.++.||+.||+|||++  ||+||||||+|||++.++ ...+|
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~--gIVHrDLKP~NILl~~~g~~~~vK  164 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHK  164 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT--TBCCCCCCSTTEEEECCSSSCEEE
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC--CCccCCCCHHHeEeecCCCceeEE
Confidence               678899999995 58999987643 23589999999999999999999964  899999999999995432 22489


Q ss_pred             EEeCCCceecCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        257 IIDFGSSCHVGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       257 L~DFG~s~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      |+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.............   .  
T Consensus       165 L~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~---~--  239 (676)
T 3qa8_A          165 IIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE---K--  239 (676)
T ss_dssp             ECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-------
T ss_pred             EcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc---c--
Confidence            9999999876433  34467899999999999999999999999999999999999999876543211100000   0  


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                           ... .........+.+.+                           +. ........+......+.+||.+||++|
T Consensus       240 -----~~~-~~~~~~~l~g~~~~---------------------------~~-~lp~p~~l~~~ls~~L~dLI~~mL~~D  285 (676)
T 3qa8_A          240 -----SNE-HIVVYDDLTGAVKF---------------------------SS-VLPTPNHLSGILAGKLERWLQCMLMWH  285 (676)
T ss_dssp             ----------CCSCCCCSSSCCC---------------------------CS-SSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred             -----cch-hhhhhhhhcccccc---------------------------cc-ccCCchhhchhhhHHHHHHHHHHccCC
Confidence                 000 00000000000000                           00 000011223334457899999999999


Q ss_pred             CCCCCCHHHHhcCCCcCcC
Q psy11727        415 PKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~~~~  433 (437)
                      |.+|||+.|+++||||+..
T Consensus       286 P~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          286 QRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             CC---CCTTCCCCTTHHHH
T ss_pred             HhhCcCHHHHhcCHHHHHH
Confidence            9999999999999999753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=5.7e-43  Score=342.70  Aligned_cols=197  Identities=21%  Similarity=0.240  Sum_probs=160.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---------cchHHHHHHHHHHHhhh---------cCC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---------FLNQAQIEVQLLEKINK---------ADI--  168 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---------~~~~~~~e~~~~~~l~~---------~~~--  168 (437)
                      .++|++.+.||+|+||+||+|++  +|+.||||++.....         ....+.+|+.+++.+..         .++  
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            46899999999999999999987  789999999975421         22677889999998862         221  


Q ss_pred             ----------CCCcEEEecceeeE-------------CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q psy11727        169 ----------HSRYIVKLKGHFTW-------------KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA  224 (437)
Q Consensus       169 ----------~h~~iv~l~~~~~~-------------~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~a  224 (437)
                                .||||++++++|.+             .+.+||||||+.+ ++.+.+..   ..+++..++.++.||+.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence                      16677777777665             7899999999955 46666543   358999999999999999


Q ss_pred             HHHhc-CCCCCeeeCCCCCCcEEEecCC------------------CCCEEEEeCCCceecCCccccccccccccChhhh
Q psy11727        225 LAFLS-SPELSIIHCDLKPENILLCSPK------------------RSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL  285 (437)
Q Consensus       225 L~~LH-~~~~giiHrDiKp~NIll~~~~------------------~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~  285 (437)
                      |+||| ++  |||||||||+|||++.+.                  ...+||+|||+|+.....  ..+||+.|+|||++
T Consensus       174 L~~lH~~~--~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~  249 (336)
T 2vuw_A          174 LAVAEASL--RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLF  249 (336)
T ss_dssp             HHHHHHHH--CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGG
T ss_pred             HHHHHHhC--CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhh
Confidence            99999 65  799999999999996432                  127999999999876543  45899999999999


Q ss_pred             cCCCCCCcchHHHHHHH-HHHHHhCCCCCCC
Q psy11727        286 LGIPYDLAIDMWSLGCI-LVELHTGEPLFSG  315 (437)
Q Consensus       286 ~~~~~~~~~DvwSlG~i-l~elltg~~pf~~  315 (437)
                      .+.. +.++||||||++ .+++++|..||.+
T Consensus       250 ~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          250 TGDG-DYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             CCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             cCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence            8876 899999998777 7788889999954

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=3.5e-41  Score=327.60  Aligned_cols=199  Identities=29%  Similarity=0.376  Sum_probs=166.6

Q ss_pred             ceeccCe-eeeceecccCceEEEEEEE----cCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        106 EKFLDRY-EIDTLLGKGSFGQVVKAFD----HEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       106 ~~~~~~y-~i~~~lG~G~fg~V~~~~~----~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      ..+.++| ++.+.||+|+||+||+|..    ..+++.||||++....  .....+.+|+.++..+     .||||+++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~  100 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-----YHEHIIKYKG  100 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-----CCcchhhEEE
Confidence            3455666 9999999999999988753    4578999999997543  2234567788888877     6899999999


Q ss_pred             eeeE--CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCE
Q psy11727        179 HFTW--KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAI  255 (437)
Q Consensus       179 ~~~~--~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~i  255 (437)
                      ++.+  ...+++||||+++ +|.+++....   +++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+
T Consensus       101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~--~ivH~Dikp~Nil~--~~~~~~  173 (318)
T 3lxp_A          101 CCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ--HYIHRDLAARNVLL--DNDRLV  173 (318)
T ss_dssp             EEEETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTCCE
T ss_pred             EEecCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC--CccCCCCchheEEE--cCCCCE
Confidence            9998  4689999999965 8998887653   89999999999999999999964  89999999999999  678889


Q ss_pred             EEEeCCCceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        256 KIIDFGSSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       256 kL~DFG~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      ||+|||++......      .....++..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       174 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  240 (318)
T 3lxp_A          174 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP  240 (318)
T ss_dssp             EECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             EECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence            99999999876442      22345778899999999989999999999999999999999999764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=7e-41  Score=327.92  Aligned_cols=201  Identities=21%  Similarity=0.277  Sum_probs=166.7

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+..+.++|.+.+.||+|+||+||+|.+  +++.||||++....  ......|..++....   +.||||+++++++...
T Consensus        36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~---l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           36 VQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVM---LRHENILGFIAADNKD  108 (342)
T ss_dssp             HHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHSC---CCCTTBCCEEEEEECC
T ss_pred             ecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHHHHHHHHHHHHhh---cCCCcEEEEEeeeccc
Confidence            3455678999999999999999999987  58899999996432  345566777766532   4899999999999877


Q ss_pred             C----EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCC
Q psy11727        184 N----HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       184 ~----~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~  252 (437)
                      +    .+++||||+++ +|.+++...   .+++..++.++.||+.||+|||..      ..||+||||||+|||+  +.+
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll--~~~  183 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKN  183 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE--CTT
T ss_pred             CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE--CCC
Confidence            6    89999999976 899999764   489999999999999999999942      3489999999999999  678


Q ss_pred             CCEEEEeCCCceecCCc-------cccccccccccChhhhcCCC------CCCcchHHHHHHHHHHHHhC----------
Q psy11727        253 SAIKIIDFGSSCHVGQT-------LYQYIQSRYYRSPEVLLGIP------YDLAIDMWSLGCILVELHTG----------  309 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltg----------  309 (437)
                      +.+||+|||++......       .....||+.|+|||++.+..      ++.++|||||||++|||++|          
T Consensus       184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~  263 (342)
T 1b6c_B          184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  263 (342)
T ss_dssp             SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence            89999999999765432       23457899999999998752      33689999999999999999          


Q ss_pred             CCCCCCC
Q psy11727        310 EPLFSGK  316 (437)
Q Consensus       310 ~~pf~~~  316 (437)
                      ..||...
T Consensus       264 ~~p~~~~  270 (342)
T 1b6c_B          264 QLPYYDL  270 (342)
T ss_dssp             CCTTTTT
T ss_pred             ccCcccc
Confidence            7787654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-41  Score=333.47  Aligned_cols=245  Identities=20%  Similarity=0.275  Sum_probs=182.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCC---eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee-EC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT-WK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~-~~  183 (437)
                      ..|.+.+.||+|+||+||+|.+..++   ..||+|.++....  ....+..|+.++..     +.||||+++++++. ..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~-----l~hpnIv~~~~~~~~~~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD-----FSHPNVLSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTT-----CCCTTBCCCCEEECCCS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh-----CCCCCcceEEEEEEcCC
Confidence            35889999999999999999875432   4689999864321  22334445554444     47999999999865 45


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..++||||+++ +|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll--~~~~~~kL~DFG~  238 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK--KFVHRDLAARNCML--DEKFTVKVADFGL  238 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEECCC--
T ss_pred             CCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC--CEecCccchheEEE--CCCCCEEEeeccc
Confidence            688999999965 8999987654 4589999999999999999999964  89999999999999  6788999999999


Q ss_pred             ceecCCc-------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        263 SCHVGQT-------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       263 s~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +......       .....++..|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+......+..
T Consensus       239 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p  318 (373)
T 3c1x_A          239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP  318 (373)
T ss_dssp             -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCC
T ss_pred             cccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            9755322       123456778999999999999999999999999999999 78999887665554444321110000


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                                                .    .....+.+||.+||+.|
T Consensus       319 ----------------------------------------------------------~----~~~~~l~~li~~cl~~d  336 (373)
T 3c1x_A          319 ----------------------------------------------------------E----YCPDPLYEVMLKCWHPK  336 (373)
T ss_dssp             ----------------------------------------------------------T----TCCHHHHHHHHHHTCSS
T ss_pred             ----------------------------------------------------------C----CCCHHHHHHHHHHcCCC
Confidence                                                                      0    00125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.|+++
T Consensus       337 p~~RPs~~ell~  348 (373)
T 3c1x_A          337 AEMRPSFSELVS  348 (373)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4.1e-41  Score=321.90  Aligned_cols=246  Identities=24%  Similarity=0.291  Sum_probs=188.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-CC--eEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-EK--CQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-~~--~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|.+.. ++  ..||||+++...    .....+..|+.++..+     .||||+++++++.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   91 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLYGVVL   91 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-----CCCCcccEEEEEc
Confidence            4689999999999999999998643 33  368999986432    2334566788887776     6899999999998


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      ..+ .++|||++. ++|.+++.... ..+++..++.++.||+.||.|||++  ||+||||||+|||+  +.++.+||+||
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~i~H~dikp~Nili--~~~~~~kl~Df  165 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK--RFIHRDLAARNLLL--ATRDLVKIGDF  165 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--EETTEEEECCC
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC--CcccCCCchheEEE--cCCCCEEEccc
Confidence            765 889999996 58999887653 3589999999999999999999964  89999999999999  56778999999


Q ss_pred             CCceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        261 GSSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       261 G~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |++.......      ....+|..|+|||++.+..++.++||||||+++|+|++ |++||.+.+..+....+......++
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~  245 (291)
T 1u46_A          166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP  245 (291)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC
T ss_pred             cccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC
Confidence            9997764322      23456778999999998889999999999999999999 9999999887766665533111100


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .                                    .                         ......+.+||.+||+.
T Consensus       246 ~------------------------------------~-------------------------~~~~~~l~~li~~~l~~  264 (291)
T 1u46_A          246 R------------------------------------P-------------------------EDCPQDIYNVMVQCWAH  264 (291)
T ss_dssp             C------------------------------------C-------------------------TTCCHHHHHHHHHHTCS
T ss_pred             C------------------------------------C-------------------------cCcCHHHHHHHHHHccC
Confidence            0                                    0                         00012578999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy11727        414 DPKKRISPTNVLR  426 (437)
Q Consensus       414 dP~~R~t~~e~l~  426 (437)
                      ||.+|||+.++++
T Consensus       265 ~p~~Rps~~~l~~  277 (291)
T 1u46_A          265 KPEDRPTFVALRD  277 (291)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-40  Score=350.31  Aligned_cols=245  Identities=22%  Similarity=0.282  Sum_probs=193.3

Q ss_pred             ccCeeeec-eecccCceEEEEEEEc--CCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDT-LLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~-~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .+++.+.+ .||+|+||+||+|.+.  .++..||||+++...  .....+..|+.++..+     .|||||++++++.. 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~hpniv~l~~~~~~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQA-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-----CCTTBCCEEEEEES-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEecc-
Confidence            34566666 8999999999999875  356779999997532  2345677788887665     78999999999876 


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++||||+++ +|.+++.... ..+++..+..++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~--~iiHrDlkp~NILl--~~~~~vkL~DFGl  482 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK--NFVHRNLAARNVLL--VNRHYAKISDFGL  482 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEECCCST
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--CEEcCcCCHHHEEE--cCCCcEEEeeccC
Confidence            569999999965 7888886543 5699999999999999999999964  89999999999999  5678899999999


Q ss_pred             ceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        263 SCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       263 s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +.......      ....++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+.....++...
T Consensus       483 a~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~  562 (613)
T 2ozo_A          483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP  562 (613)
T ss_dssp             TTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCT
T ss_pred             cccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            97653321      12234578999999998899999999999999999998 999999988877776664422111000


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                                                                                    .....+.+||.+||+.||
T Consensus       563 --------------------------------------------------------------~~~~~l~~li~~cl~~dP  580 (613)
T 2ozo_A          563 --------------------------------------------------------------ECPPELYALMSDCWIYKW  580 (613)
T ss_dssp             --------------------------------------------------------------TCCHHHHHHHHHTTCSST
T ss_pred             --------------------------------------------------------------cCCHHHHHHHHHHcCCCh
Confidence                                                                          001257899999999999


Q ss_pred             CCCCCHHHHhc
Q psy11727        416 KKRISPTNVLR  426 (437)
Q Consensus       416 ~~R~t~~e~l~  426 (437)
                      .+|||+.++++
T Consensus       581 ~~RPs~~~l~~  591 (613)
T 2ozo_A          581 EDRPDFLTVEQ  591 (613)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.8e-40  Score=349.77  Aligned_cols=238  Identities=23%  Similarity=0.324  Sum_probs=191.1

Q ss_pred             eceecccCceEEEEEEE--cCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFD--HEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~--~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      .+.||+|+||.||+|.+  ..+++.||||+++....   ....+..|+.++..+     .|||||++++++.. +..++|
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~-~~~~lv  447 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEA-ESWMLV  447 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-----CCTTBCCEEEEEES-SSEEEE
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec-CCEEEE
Confidence            34899999999999954  45678999999975322   235677899998887     68999999999864 568899


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+.+ +|.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||++.....
T Consensus       448 ~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~--~iiHrDLkp~NILl--~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES--NFVHRDLAARNVLL--VTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             EECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEECCTTHHHHTTC
T ss_pred             EEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC--CEeCCCCChHhEEE--eCCCCEEEEEcCCcccccc
Confidence            999965 899998764  3589999999999999999999964  89999999999999  5677899999999976533


Q ss_pred             cc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        269 TL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       269 ~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..      ....+|..|+|||++.+..++.++|||||||++|||++ |++||.+.+..+....+......+...      
T Consensus       522 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~------  595 (635)
T 4fl3_A          522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA------  595 (635)
T ss_dssp             -------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT------
T ss_pred             CccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC------
Confidence            21      22345778999999999999999999999999999998 999999998877766664422111000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                              .....+.+||.+||+.||.+|||+
T Consensus       596 --------------------------------------------------------~~~~~l~~li~~cl~~dP~~RPs~  619 (635)
T 4fl3_A          596 --------------------------------------------------------GCPREMYDLMNLCWTYDVENRPGF  619 (635)
T ss_dssp             --------------------------------------------------------TCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             --------------------------------------------------------CCCHHHHHHHHHHcCCCHhHCcCH
Confidence                                                                    001257899999999999999999


Q ss_pred             HHHhc
Q psy11727        422 TNVLR  426 (437)
Q Consensus       422 ~e~l~  426 (437)
                      .++++
T Consensus       620 ~~l~~  624 (635)
T 4fl3_A          620 AAVEL  624 (635)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.3e-40  Score=321.06  Aligned_cols=246  Identities=24%  Similarity=0.363  Sum_probs=191.4

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      +...++|++.+.||+|+||+||+|.+..   .||+|++....   .....+..|+.++..+     .|+||+++++++.+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT-----RHENVVLFMGACMS  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-----CCTTBCCCCEEEEC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-----CCCCEeEEEEEEec
Confidence            3346789999999999999999998754   39999986432   2223444566665554     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+.+++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  + ++.+||+|||
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~--~i~H~dlkp~NIl~--~-~~~~~l~Dfg  174 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVFY--D-NGKVVITDFG  174 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSTTEEE--C---CCEECCCS
T ss_pred             CCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCChhhEEE--e-CCCEEEeecC
Confidence            9999999999965 8888886643 4689999999999999999999964  89999999999999  3 5689999999


Q ss_pred             CceecC--------CccccccccccccChhhhcC---------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q psy11727        262 SSCHVG--------QTLYQYIQSRYYRSPEVLLG---------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK  324 (437)
Q Consensus       262 ~s~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~  324 (437)
                      ++....        .......|++.|+|||++.+         ..++.++|||||||++|+|++|+.||.+.+.......
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  254 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ  254 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            976542        12233468899999999975         4578999999999999999999999999887766655


Q ss_pred             HHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        325 IIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       325 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      +......+..                 .                                            ......+.
T Consensus       255 ~~~~~~~~~~-----------------~--------------------------------------------~~~~~~l~  273 (319)
T 2y4i_B          255 MGTGMKPNLS-----------------Q--------------------------------------------IGMGKEIS  273 (319)
T ss_dssp             HHTTCCCCCC-----------------C--------------------------------------------SSCCTTHH
T ss_pred             hccCCCCCCC-----------------c--------------------------------------------CCCCHHHH
Confidence            5332110000                 0                                            00001478


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q psy11727        405 DLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      +||.+||+.||.+|||+.++++
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.2e-40  Score=321.78  Aligned_cols=197  Identities=26%  Similarity=0.403  Sum_probs=165.8

Q ss_pred             ccCeeeeceecccCceEEEEEE----EcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAF----DHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~----~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.+.||+|+||.||+|.    +..+++.||||++.... .....+.+|+.++..+     .|+||+++++++...
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QHDNIVKYKGVCYSA  114 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECC-
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEec
Confidence            5679999999999999999998    46689999999997543 2234566788887766     689999999988754


Q ss_pred             C--EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        184 N--HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       184 ~--~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                      +  .+++|||++++ +|.+++.... ..+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+||+||
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~--~ivH~dikp~NIli--~~~~~~kL~Df  189 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK--RYIHRDLATRNILV--ENENRVKIGDF  189 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--EETTEEEECCC
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC--CEeccCCCcceEEE--cCCCcEEEecC
Confidence            4  78999999965 8999987754 4589999999999999999999964  89999999999999  55778999999


Q ss_pred             CCceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q psy11727        261 GSSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG  315 (437)
Q Consensus       261 G~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~  315 (437)
                      |++.......      ....++..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            9998764332      123467789999999988899999999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.6e-39  Score=345.30  Aligned_cols=248  Identities=25%  Similarity=0.333  Sum_probs=197.9

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +...++|++.+.||+|+||+||+|.+..+   +..||||.++...  .....+..|+.++..+     .||||+++++++
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~  460 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVI  460 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEE
Confidence            34457899999999999999999988643   5679999986432  1224566677777766     789999999988


Q ss_pred             eECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      . .+..++||||++ ++|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  +.++.+||+|
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~--givHrDikp~NILl--~~~~~vkL~D  534 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLV--SSNDCVKLGD  534 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEECC
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC--CccccccchHhEEE--eCCCCEEEEe
Confidence            5 466899999996 58999887654 4589999999999999999999964  89999999999999  5678899999


Q ss_pred             CCCceecCCcc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        260 FGSSCHVGQTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       260 FG~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ||++.......    ....+++.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....+......+..
T Consensus       535 FG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~  614 (656)
T 2j0j_A          535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP  614 (656)
T ss_dssp             CCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCC
T ss_pred             cCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            99997664332    22456788999999998899999999999999999997 99999999888777776543211100


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      .                                                              .....+.+||.+||+.|
T Consensus       615 ~--------------------------------------------------------------~~~~~l~~li~~~l~~d  632 (656)
T 2j0j_A          615 P--------------------------------------------------------------NCPPTLYSLMTKCWAYD  632 (656)
T ss_dssp             T--------------------------------------------------------------TCCHHHHHHHHHHTCSS
T ss_pred             c--------------------------------------------------------------cccHHHHHHHHHHcCCC
Confidence            0                                                              00125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.++++
T Consensus       633 P~~RPs~~el~~  644 (656)
T 2j0j_A          633 PSRRPRFTELKA  644 (656)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.3e-39  Score=345.00  Aligned_cols=245  Identities=21%  Similarity=0.342  Sum_probs=191.9

Q ss_pred             eecCceeccCeeeeceecccCceEEEEEEEcC-CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecc
Q psy11727        102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHE-EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKG  178 (437)
Q Consensus       102 ~~~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~-~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~  178 (437)
                      +..++.+.++|++.+.||+|+||+||+|.+.. +++.||||++.....  ....+..|+.++..     +.||||+++++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-----l~hp~iv~~~~  146 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE-----VVHPSIVQIFN  146 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGG-----CCCTTBCCEEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHh-----cCCCCcCeEee
Confidence            34567788999999999999999999999976 789999999864321  12234455555544     47999999999


Q ss_pred             eeeECCE-----EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC
Q psy11727        179 HFTWKNH-----LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       179 ~~~~~~~-----~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~  252 (437)
                      +|...+.     .||||||++| +|.+++..    .+++..++.++.||+.||.|||++  |||||||||+|||++  . 
T Consensus       147 ~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~--giiHrDlkp~NIll~--~-  217 (681)
T 2pzi_A          147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI--GLVYNDLKPENIMLT--E-  217 (681)
T ss_dssp             EEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEC--S-
T ss_pred             eEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC--CCeecccChHHeEEe--C-
Confidence            9987665     7999999976 77776544    489999999999999999999964  899999999999994  3 


Q ss_pred             CCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q psy11727        253 SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMP  332 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p  332 (437)
                      +.+||+|||++...... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+....          +.+
T Consensus       218 ~~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------~~~  285 (681)
T 2pzi_A          218 EQLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD----------GLP  285 (681)
T ss_dssp             SCEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS----------SCC
T ss_pred             CcEEEEecccchhcccC-CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc----------ccc
Confidence            37999999999877654 556799999999999765 489999999999999999999998752110          000


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ..                                     ..                      .......+.+||.+||+
T Consensus       286 ~~-------------------------------------~~----------------------~~~~~~~l~~li~~~l~  306 (681)
T 2pzi_A          286 ED-------------------------------------DP----------------------VLKTYDSYGRLLRRAID  306 (681)
T ss_dssp             TT-------------------------------------CH----------------------HHHHCHHHHHHHHHHTC
T ss_pred             cc-------------------------------------cc----------------------ccccCHHHHHHHhhhcc
Confidence            00                                     00                      00011257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcC
Q psy11727        413 YDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~  431 (437)
                      .||.+|||..+++.|+|+.
T Consensus       307 ~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          307 PDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             SSGGGSCSSHHHHHHHHHH
T ss_pred             CChhhCCCHHHHHHHHHHH
Confidence            9999999999999888763

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.1e-39  Score=308.66  Aligned_cols=179  Identities=13%  Similarity=0.060  Sum_probs=149.4

Q ss_pred             ecCc-eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccc----hHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        103 KHGE-KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFL----NQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       103 ~~~~-~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~----~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      ..+. .+.++|++.+.||+|+||+||+|.+..+++.||||++.......    ..+..|..++..     +.|+||++++
T Consensus        23 ~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-----l~hp~iv~~~   97 (286)
T 3uqc_A           23 VPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSR-----IDKPGVARVL   97 (286)
T ss_dssp             CTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHT-----CCCTTBCCEE
T ss_pred             CCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhc-----CCCCCcceee
Confidence            4455 56788999999999999999999999999999999997543322    445556665544     4899999999


Q ss_pred             ceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                      +++.+.+..|+||||+.| +|.+++...    .....+..++.||+.||+|||++  ||+||||||+|||+  +.++.+|
T Consensus        98 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~--givH~Dikp~NIll--~~~g~~k  169 (286)
T 3uqc_A           98 DVVHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA--GVALSIDHPSRVRV--SIDGDVV  169 (286)
T ss_dssp             EEEEETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCSGGGEEE--ETTSCEE
T ss_pred             EEEEECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC--CCccCCCCcccEEE--cCCCCEE
Confidence            999999999999999965 899888542    46667889999999999999964  89999999999999  5678899


Q ss_pred             EEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCH
Q psy11727        257 IIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNE  318 (437)
Q Consensus       257 L~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~  318 (437)
                      |+++|.                 ++       +++.++|||||||++|+|++|++||.+.+.
T Consensus       170 l~~~~~-----------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~  207 (286)
T 3uqc_A          170 LAYPAT-----------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV  207 (286)
T ss_dssp             ECSCCC-----------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred             EEeccc-----------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence            985543                 33       378999999999999999999999987653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=1.8e-32  Score=286.15  Aligned_cols=183  Identities=17%  Similarity=0.045  Sum_probs=128.0

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCc-----------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-----------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-----------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ...+.|++|.+..++....|+.||+|++....           ....++.+|+.+++++.    .|+||+++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~~~~~~ed~~  315 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP----AGFDAPAVLAHGENAQ  315 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC----TTCCCCCEEEEEECSS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC----CCCCeeEEEEEEEECC
Confidence            34677888888887777789999999997432           12245677888888774    6889999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+||||||++| +|.+++....  .++.   ..|+.||+.||+|||++  |||||||||+|||+  +.+|.+||+|||+|
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~~--~l~~---~~I~~QIl~AL~ylH~~--GIIHRDIKPeNILL--~~dg~vKL~DFGlA  386 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAGE--EIDR---EKILGSLLRSLAALEKQ--GFWHDDVRPWNVMV--DARQHARLIDFGSI  386 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTTC--CCCH---HHHHHHHHHHHHHHHHT--TCEESCCCGGGEEE--CTTSCEEECCCTTE
T ss_pred             EEEEEEecCCCCcHHHHHHhCC--CCCH---HHHHHHHHHHHHHHHHC--CceeccCchHhEEE--CCCCCEEEeecccC
Confidence            99999999977 8999998753  4655   35899999999999964  89999999999999  67889999999999


Q ss_pred             eecCC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q psy11727        264 CHVGQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPL  312 (437)
Q Consensus       264 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~p  312 (437)
                      +....   ...+.+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus       387 r~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          387 VTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             eeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            76643   3456789999999999987 467889999999998887665433

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.93  E-value=2e-26  Score=239.18  Aligned_cols=179  Identities=17%  Similarity=0.140  Sum_probs=138.6

Q ss_pred             eeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---------chHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        113 EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---------LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       113 ~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---------~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ...+.||+|+||+||+|  ...+..+|+|....+...         ..++.+|+.+++.+     .||||+++..++...
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~~~~~~  411 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-----KDFGIPAPYIFDVDL  411 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-----GGGTCCCCCEEEEET
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-----CCCCcCceEEEEEeC
Confidence            44678999999999999  445778999987543211         23357788888888     578888666666677


Q ss_pred             CEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +..||||||++ ++|.+++..          +..++.||+.||.|||++  ||+||||||+|||+  +.  .+||+|||+
T Consensus       412 ~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~--gIiHrDiKp~NILl--~~--~~kL~DFGl  475 (540)
T 3en9_A          412 DNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN--DVIHNDLTTSNFIF--DK--DLYIIDFGL  475 (540)
T ss_dssp             TTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT--TEECTTCCTTSEEE--SS--SEEECCCTT
T ss_pred             CccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC--cCccCCCCHHHEEE--CC--eEEEEECcc
Confidence            88899999996 589888765          568999999999999964  89999999999999  44  899999999


Q ss_pred             ceecCCcc----------ccccccccccChhhhcC--CCCCCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        263 SCHVGQTL----------YQYIQSRYYRSPEVLLG--IPYDLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       263 s~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~pf~  314 (437)
                      |+......          ...+||+.|+|||++.+  ..|+..+|+||..+-..+...++.+|.
T Consensus       476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            98876531          35689999999999987  568889999999999888888877664

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.89  E-value=1e-23  Score=201.12  Aligned_cols=154  Identities=23%  Similarity=0.331  Sum_probs=116.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------------------cchHHHHHHHHHHHhhhcCCCCC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------------------FLNQAQIEVQLLEKINKADIHSR  171 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------------------~~~~~~~e~~~~~~l~~~~~~h~  171 (437)
                      .|.+.+.||+|+||.||+|.+ .+|+.||||+++....                   ....+..|+.++..+.       
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-------  162 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-------  162 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-------
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-------
Confidence            466779999999999999999 8899999999964321                   1234678999988875       


Q ss_pred             cEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        172 YIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       172 ~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      | +++.+++.. +..|+||||++| +|.+ +.        ......++.||+.||.|||+  .||+||||||+|||+  +
T Consensus       163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~--~giiHrDlkp~NILl--~  227 (282)
T 1zar_A          163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYH--RGIVHGDLSQYNVLV--S  227 (282)
T ss_dssp             T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEE--E
T ss_pred             C-CCcCeEEec-cceEEEEEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHH--CCCEeCCCCHHHEEE--E
Confidence            2 444554443 556999999976 7876 31        12355799999999999995  489999999999999  4


Q ss_pred             CCCCEEEEeCCCceecCCccccccccccccChhhhcC----------CCCCCcchHHH
Q psy11727        251 KRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLG----------IPYDLAIDMWS  298 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwS  298 (437)
                       ++.+||+|||+|+.          +..+.|||++..          ..|...+|+|.
T Consensus       228 -~~~vkl~DFG~a~~----------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          228 -EEGIWIIDFPQSVE----------VGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             -TTEEEECCCTTCEE----------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             -CCcEEEEECCCCeE----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence             78899999999863          345788998753          34455566664

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.86  E-value=1.8e-21  Score=183.12  Aligned_cols=138  Identities=17%  Similarity=0.190  Sum_probs=109.0

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeE--EEEEEecCCccc-------------------------chHHHHHHHHHHHhh
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQ--VAIKIIKNKKPF-------------------------LNQAQIEVQLLEKIN  164 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~~~~-------------------------~~~~~~e~~~~~~l~  164 (437)
                      |.+.+.||+|+||+||+|.+..+|+.  ||||+++.....                         ...+..|..++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999998778989  999997543211                         025678999999998


Q ss_pred             hcCCCCCcEEEecceeeECCEEEEEEEeccC------cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhc-CCCCCeee
Q psy11727        165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY------NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS-SPELSIIH  237 (437)
Q Consensus       165 ~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~------~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH-~~~~giiH  237 (437)
                      +.++.+|.++..       +..+|||||+++      .|.+....     .++..+..++.||+.+|.||| .+  ||||
T Consensus       129 ~~~i~~p~~~~~-------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~--givH  194 (258)
T 1zth_A          129 EAGVSVPQPYTY-------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA--ELVH  194 (258)
T ss_dssp             HTTCCCCCEEEE-------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS--CEEC
T ss_pred             hCCCCCCeEEEc-------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC--CEEe
Confidence            887777766542       245899999953      45554332     235677899999999999999 75  8999


Q ss_pred             CCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        238 CDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       238 rDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||||+|||+  +.  .++|+|||+|....
T Consensus       195 rDlkp~NILl--~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          195 ADLSEYNIMY--ID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             SSCSTTSEEE--SS--SEEECCCTTCEETT
T ss_pred             CCCCHHHEEE--cC--cEEEEECcccccCC
Confidence            9999999999  44  79999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.71  E-value=2.9e-17  Score=161.60  Aligned_cols=139  Identities=18%  Similarity=0.219  Sum_probs=99.2

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----------c-------------hHHHHHHHHHHHhhhcCC
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----------L-------------NQAQIEVQLLEKINKADI  168 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----------~-------------~~~~~e~~~~~~l~~~~~  168 (437)
                      |.+.+.||+|+||.||+|.+. +|+.||||+++.....          .             -....|...+.++....+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999874 6899999998632110          0             012346667777766555


Q ss_pred             CCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      ..|..+..      .. .+|||||++| .|.++.        .......++.||+.+|.+||.  .|||||||||.|||+
T Consensus       176 ~vp~p~~~------~~-~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~--~gIVHrDLKp~NILl  238 (397)
T 4gyi_A          176 PVPEPIAQ------SR-HTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAK--HGLIHGDFNEFNILI  238 (397)
T ss_dssp             SCCCEEEE------ET-TEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEE
T ss_pred             CCCeeeec------cC-ceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHHHEEE
Confidence            44433221      12 2799999987 554321        223456789999999999995  489999999999999


Q ss_pred             ecCCCC--------CEEEEeCCCceecCC
Q psy11727        248 CSPKRS--------AIKIIDFGSSCHVGQ  268 (437)
Q Consensus       248 ~~~~~~--------~ikL~DFG~s~~~~~  268 (437)
                      ..++++        .+.||||+-+.....
T Consensus       239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~h  267 (397)
T 4gyi_A          239 REEKDAEDPSSITLTPIIIXFPQMVSMDH  267 (397)
T ss_dssp             EEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred             eCCCCcccccccccceEEEEeCCcccCCC
Confidence            654332        388999998876543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.29  E-value=1.3e-11  Score=115.51  Aligned_cols=141  Identities=16%  Similarity=0.103  Sum_probs=106.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|.+...++.|+.+.||++..  .+..+++|+..... .....+..|..+++.+..    +..+.++++++.+.+..|
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~----~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----KLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc----CCCCCeEEEEEecCCceE
Confidence            45788999999999999999964  36789999986421 223468889999999864    234666777788888999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP-----------------------------------  231 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~-----------------------------------  231 (437)
                      +|||+++| +|.+.+.       +......++.+++.+|+.||+.                                   
T Consensus        87 lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             EEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            99999988 6665421       1223457888999999999961                                   


Q ss_pred             ----------------------CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        232 ----------------------ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       232 ----------------------~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                                            ..+++|+|++|.|||+.  +...+.|+||+.+.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~--~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK--DGKVSGFIDLGRSG  212 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE--TTEEEEECCCTTCE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE--CCcEEEEEEchhcc
Confidence                                  04589999999999994  44446799999873

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.14  E-value=1.4e-10  Score=107.71  Aligned_cols=138  Identities=17%  Similarity=0.069  Sum_probs=97.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      ...|.+..+.+.|..+.||++.. .+|..+++|+....  .......|..+++.+...++.   +.+++++....+..++
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~---vP~~~~~~~~~~~~~~   92 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVP---CAAVLDVVTEAGRDWL   92 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCC---BCCEEEEEECSSCEEE
T ss_pred             cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCC---CCeEEEeccCCCCCEE
Confidence            34566655545666799999953 55678999997643  335678899999998754332   4556666777778999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCC-----------------------------------
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPE-----------------------------------  232 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~-----------------------------------  232 (437)
                      |||+++| ++ + ..     ..+   ...++.+++..|+.||...                                   
T Consensus        93 v~e~i~G~~l-~-~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           93 LLGEVPGQDL-L-SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             EEECCSSEET-T-TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             EEEecCCccc-C-cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            9999988 45 3 11     111   2356777888888888532                                   


Q ss_pred             ---------------------CCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        233 ---------------------LSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       233 ---------------------~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                                           .+++|+|++|.|||+.  +++.+.|+|||.+.
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~--~~~~~~liD~~~a~  213 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE--NGRFSGFIDCGRLG  213 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE--TTEEEEECCCTTCE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE--CCcEEEEEcchhcc
Confidence                                 1399999999999994  44456799999874

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.06  E-value=2.7e-10  Score=108.98  Aligned_cols=186  Identities=19%  Similarity=0.133  Sum_probs=118.1

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhh-cCCCCCcEEEecceeeECC---EEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVKLKGHFTWKN---HLCLVF  190 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~-~~~~h~~iv~l~~~~~~~~---~~~lV~  190 (437)
                      .+.++.|....||++.     ..+++|+... .........|..+++.+.. ..+..|.++.   .....+   ..|+||
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~---~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVVF---TGMPSETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEEE---ECCCCSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceEe---ecCCCCCCCcceEEE
Confidence            3458999999999873     3588998653 2334567889999988843 3344444432   222222   458899


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP--------------------------------------  231 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~--------------------------------------  231 (437)
                      ++++| .+.+....    .++......++.|++..|+.||..                                      
T Consensus        96 ~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           96 TKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             ECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             cccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            99988 55443221    256777777888888877777741                                      


Q ss_pred             ------------------CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCccccccccccc---cChhhhcC---
Q psy11727        232 ------------------ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYY---RSPEVLLG---  287 (437)
Q Consensus       232 ------------------~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y---~aPE~~~~---  287 (437)
                                        ...++|+|++|.||+++.+....+.|+||+.+..-.. .........+   .+|+....   
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~l~  250 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFISLMEDDEEYGMEFVSKILN  250 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHHTTCCTTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHHHHHhhccccCHHHHHHHHH
Confidence                              1358999999999999533245578999999865322 1111111111   23332211   


Q ss_pred             -CC-C---------CCcchHHHHHHHHHHHHhCCCCCC
Q psy11727        288 -IP-Y---------DLAIDMWSLGCILVELHTGEPLFS  314 (437)
Q Consensus       288 -~~-~---------~~~~DvwSlG~il~elltg~~pf~  314 (437)
                       .+ .         ..-.+.|++|.++|.+.+|.++|.
T Consensus       251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence             00 0         122689999999999999987763

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.03  E-value=6.9e-10  Score=108.70  Aligned_cols=143  Identities=14%  Similarity=0.213  Sum_probs=100.5

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEec--CCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC---CEE
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK---NHL  186 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~--~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~---~~~  186 (437)
                      ..+.|+.|.++.||++...  +..+++|+..  ...  .......+|..+++.+....+   .+.+++.++.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~v---pvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDV---PVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSS---CCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCC---CCCcEEEECCCCCccCCe
Confidence            3567899999999999653  4578888775  322  123467789999999976444   355555666555   458


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC----------------------------------
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP----------------------------------  231 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~----------------------------------  231 (437)
                      ++|||+++| .+.+.    ....++......++.+++.+|+.||..                                  
T Consensus       117 ~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             EEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             EEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            999999988 44321    123467888889999999999999962                                  


Q ss_pred             ----------------------CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        232 ----------------------ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       232 ----------------------~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                                            ..++||+|++|.|||+..++...+.|+||+.+..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                  2469999999999999432223368999999864

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.48  E-value=1.3e-06  Score=81.55  Aligned_cols=133  Identities=15%  Similarity=0.190  Sum_probs=89.8

Q ss_pred             ecccCce-EEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC-
Q psy11727        118 LGKGSFG-QVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-  195 (437)
Q Consensus       118 lG~G~fg-~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~-  195 (437)
                      +..|..| .||+......+..+++|+-...  ....+..|...++.+.. .+.   +.+++.++.+.+..++|||+++| 
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~-~vP---VP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA-FMP---LPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT-TSC---CCCEEEEEEETTEEEEEEECCCSE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc-CCC---cCeEEEEEEECCeEEEEEEeeCCc
Confidence            3445555 6999877777778999987532  23567789999988864 232   55666778888999999999988 


Q ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC--------------------------------------------
Q psy11727        196 NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP--------------------------------------------  231 (437)
Q Consensus       196 ~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~--------------------------------------------  231 (437)
                      ++.+.....      ......+..+++..|+-||.-                                            
T Consensus       106 ~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          106 TAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             EHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             cccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            555543321      122234445555555555531                                            


Q ss_pred             ------------CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        232 ------------ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       232 ------------~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                                  ...++|+|+.|.|||+  ++.+.+-|+||+.+.
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~--~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIF--DEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEE--ETTEEEEECCCTTCE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEE--ECCeEEEEEECcccc
Confidence                        1237999999999999  445556799999874

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.47  E-value=1e-06  Score=84.24  Aligned_cols=139  Identities=19%  Similarity=0.153  Sum_probs=85.4

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc-CCCCCcEEEecceee-ECCEEEEEEEe
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFT-WKNHLCLVFEL  192 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~-~~~~~~lV~E~  192 (437)
                      .+.++.|....||+.     +..+++|+-. ..........|..+++.+... .+.   +.+++.+.. ..+..++|||+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~---VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVN---IPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSB---CCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCC---CCCeEeecccCCCceEEEEec
Confidence            345788888899988     4568888853 223345778899999998753 222   333333332 34567899999


Q ss_pred             ccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q psy11727        193 LSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSS-----------------------------------------  230 (437)
Q Consensus       193 ~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~-----------------------------------------  230 (437)
                      ++| .+.+....    .++......++.+++..|+.||+                                         
T Consensus        95 i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~  170 (306)
T 3tdw_A           95 VQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD  170 (306)
T ss_dssp             CCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred             cCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence            988 44432111    12333333444444444433332                                         


Q ss_pred             -----------------CCCCeeeCCCCCCcEEEecC-CCCC-EEEEeCCCceec
Q psy11727        231 -----------------PELSIIHCDLKPENILLCSP-KRSA-IKIIDFGSSCHV  266 (437)
Q Consensus       231 -----------------~~~giiHrDiKp~NIll~~~-~~~~-ikL~DFG~s~~~  266 (437)
                                       ....++|+|++|.||++..+ .++. +.|+||+.+..-
T Consensus       171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                             12357999999999999421 1344 489999987543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.30  E-value=8.1e-06  Score=78.53  Aligned_cols=75  Identities=16%  Similarity=0.185  Sum_probs=47.4

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEec-c--eeeECCEEEEEEEe
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK-G--HFTWKNHLCLVFEL  192 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~-~--~~~~~~~~~lV~E~  192 (437)
                      +.|+.|..+.||++...  +..+++|+....   ......|..+++.+...++..|.++... +  +....+..++||++
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            45666778999999653  345899998742   2445567888888876665445444421 1  12456788999999


Q ss_pred             ccC
Q psy11727        193 LSY  195 (437)
Q Consensus       193 ~~~  195 (437)
                      ++|
T Consensus       113 i~G  115 (346)
T 2q83_A          113 IEG  115 (346)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            977

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.18  E-value=7.1e-06  Score=81.14  Aligned_cols=77  Identities=19%  Similarity=0.176  Sum_probs=48.9

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCc--------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.||.|.++.||++....+++.++||......        ....+...|..++..+....  +..+.+++.+  +.+..
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~--~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEE--ETTTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhC--CCCcCeEEEE--cCCcc
Confidence            457899999999999765567789999864321        12345677999988875421  1123334332  44556


Q ss_pred             EEEEEeccC
Q psy11727        187 CLVFELLSY  195 (437)
Q Consensus       187 ~lV~E~~~~  195 (437)
                      ++|||++++
T Consensus       111 ~lvmE~l~g  119 (397)
T 2olc_A          111 VTVMEDLSH  119 (397)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEeCCC
Confidence            899999976

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.09  E-value=1.1e-05  Score=78.33  Aligned_cols=79  Identities=4%  Similarity=0.059  Sum_probs=52.6

Q ss_pred             eecee-cccCceEEEEEEEc--C----CCeEEEEEEecCCc---c-cchHHHHHHHHHHHhhhc-CCCCCcEEEecceee
Q psy11727        114 IDTLL-GKGSFGQVVKAFDH--E----EKCQVAIKIIKNKK---P-FLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFT  181 (437)
Q Consensus       114 i~~~l-G~G~fg~V~~~~~~--~----~~~~vaiK~i~~~~---~-~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~  181 (437)
                      ..+.| +.|....+|++...  .    ++..+++|+.....   . .......|..+++.+... .+.-|.+   +.+..
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v---~~~~~  100 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRV---RWIET  100 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCE---EEEEC
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcE---EEEcc
Confidence            35677 88889999988643  1    15678899865332   1 135678899999998765 5444444   44444


Q ss_pred             EC---CEEEEEEEeccC
Q psy11727        182 WK---NHLCLVFELLSY  195 (437)
Q Consensus       182 ~~---~~~~lV~E~~~~  195 (437)
                      +.   +..++|||+++|
T Consensus       101 ~~~~~g~~~~v~e~l~G  117 (357)
T 3ats_A          101 TGDVLGTPFFLMDYVEG  117 (357)
T ss_dssp             SSTTTSSCEEEEECCCC
T ss_pred             CCCccCCceEEEEecCC
Confidence            33   356899999977

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.65  E-value=0.0004  Score=65.66  Aligned_cols=69  Identities=12%  Similarity=-0.010  Sum_probs=47.0

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEec-
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELL-  193 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~-  193 (437)
                      .+.|+.|....+|++      ..+++|+........-....|..+++.+...++. |-++.   .  +.+.-++|+||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~~~---~--~~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEVLH---V--DPATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCEEE---E--CTTTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-CceEE---E--ECCCCEEEEeecC
Confidence            567888999999999      3588998864433233346799999998877765 55542   2  233346899999 


Q ss_pred             cC
Q psy11727        194 SY  195 (437)
Q Consensus       194 ~~  195 (437)
                      +|
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            66

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.58  E-value=0.00031  Score=69.85  Aligned_cols=75  Identities=15%  Similarity=0.057  Sum_probs=45.5

Q ss_pred             CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcc--ccccc--cccccChhhhcCCCCC---CcchHHHHHHHHH
Q psy11727        232 ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL--YQYIQ--SRYYRSPEVLLGIPYD---LAIDMWSLGCILV  304 (437)
Q Consensus       232 ~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~--~~~~g--t~~y~aPE~~~~~~~~---~~~DvwSlG~il~  304 (437)
                      ...++|+|++|.|||+  +.++ +.|+||+.+..-....  .....  ...|++|+......-+   ...++.++...++
T Consensus       231 ~~~liHGDl~~~Nil~--~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMV--TQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEE--CSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEE--eCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            3579999999999999  4444 9999999986543211  11111  2346777665421111   1234456777777


Q ss_pred             HHHhC
Q psy11727        305 ELHTG  309 (437)
Q Consensus       305 elltg  309 (437)
                      +.+++
T Consensus       308 ~~y~~  312 (420)
T 2pyw_A          308 NLFNK  312 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.56  E-value=0.0011  Score=62.99  Aligned_cols=146  Identities=14%  Similarity=0.190  Sum_probs=81.8

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEec-c--eeeECCEEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK-G--HFTWKNHLCLVFE  191 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~-~--~~~~~~~~~lV~E  191 (437)
                      .+.|+.|....+|++... ++ .+++|+.... ........|..+++.+...++.-|.++... +  +....+..++||+
T Consensus        27 ~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~  103 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS  103 (322)
T ss_dssp             EEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             eeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence            456788888999999653 33 6889988642 233567789999999987766555444322 1  1234567899999


Q ss_pred             eccCc-HH-----------HH---HHhc--CCCC-----CCHHHHHHH---------------HHHHHHHHHHhcC----
Q psy11727        192 LLSYN-LY-----------NL---IRNT--NFHG-----VSLNLTKKF---------------AQQLCCALAFLSS----  230 (437)
Q Consensus       192 ~~~~~-L~-----------~~---l~~~--~~~~-----ls~~~~~~i---------------~~qi~~aL~~LH~----  230 (437)
                      +++|. +.           ..   +...  .+..     .........               ...+...+..+..    
T Consensus       104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~  183 (322)
T 2ppq_A          104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  183 (322)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence            99762 10           01   1111  1110     111100000               0112333444321    


Q ss_pred             -CCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        231 -PELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       231 -~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                       ...++||+|+.+.|||+.  ++..+.|+||+.+..
T Consensus       184 ~~~~~liHgDl~~~Nil~~--~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          184 DLPAGVIHADLFQDNVFFL--GDELSGLIDFYFACN  217 (322)
T ss_dssp             SSCEEEECSCCCGGGEEEE--TTEEEEECCCTTCEE
T ss_pred             cCCcccCCCCCCccCEEEe--CCceEEEecchhccC
Confidence             134799999999999994  344457999998754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.46  E-value=0.0013  Score=62.62  Aligned_cols=78  Identities=17%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             ceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecc--eeeECCEEEEEEEec
Q psy11727        116 TLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKG--HFTWKNHLCLVFELL  193 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~--~~~~~~~~~lV~E~~  193 (437)
                      ..++ |....||++.. .+|+.+++|+.............|..+++.+...++.-|.++..-+  .....+..++||+++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3456 78889998853 3456799999864322345677799999998876554343333211  123466788999999


Q ss_pred             cC
Q psy11727        194 SY  195 (437)
Q Consensus       194 ~~  195 (437)
                      +|
T Consensus       110 ~G  111 (328)
T 1zyl_A          110 GG  111 (328)
T ss_dssp             CC
T ss_pred             CC
Confidence            77

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.42  E-value=0.00081  Score=64.43  Aligned_cols=142  Identities=14%  Similarity=0.147  Sum_probs=71.6

Q ss_pred             eecccCceE-EEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        117 LLGKGSFGQ-VVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       117 ~lG~G~fg~-V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      .|+.|+... +|+... .++..+++|......  ......|..+++.+...++.-|.++..   ....+  ++|||.+++
T Consensus        25 ~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~---d~~~g--~ll~e~l~~   96 (333)
T 3csv_A           25 PLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAE---EHARG--LLLIEDLGD   96 (333)
T ss_dssp             C--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEE---ETTTT--EEEECCCCS
T ss_pred             ECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeee---cCCCC--EEEEeeCCC
Confidence            455554443 666642 225567777654221  144566888888888766555544432   22223  689999976


Q ss_pred             -cHHHHHHhcC------------------------CCCCCHHHHH-------H-HH------------HHHHHHHHHh--
Q psy11727        196 -NLYNLIRNTN------------------------FHGVSLNLTK-------K-FA------------QQLCCALAFL--  228 (437)
Q Consensus       196 -~L~~~l~~~~------------------------~~~ls~~~~~-------~-i~------------~qi~~aL~~L--  228 (437)
                       .+.+.+....                        ...++.....       . +.            ..+...+..+  
T Consensus        97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~  176 (333)
T 3csv_A           97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS  176 (333)
T ss_dssp             CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence             5544332110                        1112211110       0 00            0111112222  


Q ss_pred             --cCCCCCeeeCCCCCCcEEEecCC--CCCEEEEeCCCceec
Q psy11727        229 --SSPELSIIHCDLKPENILLCSPK--RSAIKIIDFGSSCHV  266 (437)
Q Consensus       229 --H~~~~giiHrDiKp~NIll~~~~--~~~ikL~DFG~s~~~  266 (437)
                        ......++|+|+.+.|||+..+.  .+.+.|+||+.+..-
T Consensus       177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence              12235799999999999994321  156899999988543

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.29  E-value=0.0034  Score=59.77  Aligned_cols=74  Identities=22%  Similarity=0.212  Sum_probs=55.2

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhc-CCCCCcEEEecceeeECCEEEEEEEec
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFTWKNHLCLVFELL  193 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~~~~~~~lV~E~~  193 (437)
                      .+.|+.|....+|+...  ++..+++|+....  ....+..|...++.+... .+   .+.+++.+....+..++|||++
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v---~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSI---NVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSS---BCCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCC---CcceEEEEeecCCceEEEEEec
Confidence            45689999999999964  4667889987532  245678899999998764 23   3555556666678899999999


Q ss_pred             cC
Q psy11727        194 SY  195 (437)
Q Consensus       194 ~~  195 (437)
                      +|
T Consensus       114 ~G  115 (312)
T 3jr1_A          114 NK  115 (312)
T ss_dssp             CC
T ss_pred             cC
Confidence            76

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.23  E-value=0.0017  Score=63.12  Aligned_cols=73  Identities=16%  Similarity=0.125  Sum_probs=44.7

Q ss_pred             eceecccCceEEEEEEEcC--------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHE--------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~--------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.|+.|....+|++....        .+..+++|+.............|..+++.+...++ .|-++   +.+  .+  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P~~~---~~~--~~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-APQLL---NTF--NG--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SCCEE---EEE--TT--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CCceE---Eec--CC--
Confidence            3466788888999987543        13678899876433222234679999999887665 44443   222  22  


Q ss_pred             EEEEEeccC
Q psy11727        187 CLVFELLSY  195 (437)
Q Consensus       187 ~lV~E~~~~  195 (437)
                      ++||||++|
T Consensus       110 ~~v~e~i~G  118 (369)
T 3c5i_A          110 GRIEEWLYG  118 (369)
T ss_dssp             EEEEECCCS
T ss_pred             cEEEEEecC
Confidence            589999976

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.22  E-value=0.00072  Score=66.29  Aligned_cols=142  Identities=14%  Similarity=0.214  Sum_probs=79.7

Q ss_pred             ceecccCceEEEEEEEcC-------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +.|..|-...+|++....       +++.+++|+............+|..+++.+...++. |-+   ++.+.  +  .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~-P~l---l~~~~--~--g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLG-PQL---YGVFP--E--GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSS-CCE---EEEET--T--EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCC-CeE---EEEcC--C--cc
Confidence            355667777788886532       346899998643222345566899999999887763 444   34443  2  28


Q ss_pred             EEEeccC-cHH--------------HHH---HhcC--CC-CC--CHHHHHHHHHHHHH-------------------HHH
Q psy11727        189 VFELLSY-NLY--------------NLI---RNTN--FH-GV--SLNLTKKFAQQLCC-------------------ALA  226 (437)
Q Consensus       189 V~E~~~~-~L~--------------~~l---~~~~--~~-~l--s~~~~~~i~~qi~~-------------------aL~  226 (437)
                      ||||++| .+.              +.+   ....  .. ..  -+..+.++..++..                   .+.
T Consensus       128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~  207 (379)
T 3feg_A          128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG  207 (379)
T ss_dssp             EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred             EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence            9999976 221              111   1111  01 11  13455555554422                   122


Q ss_pred             ----Hhc--CCCCCeeeCCCCCCcEEEecC--CCCCEEEEeCCCcee
Q psy11727        227 ----FLS--SPELSIIHCDLKPENILLCSP--KRSAIKIIDFGSSCH  265 (437)
Q Consensus       227 ----~LH--~~~~giiHrDiKp~NIll~~~--~~~~ikL~DFG~s~~  265 (437)
                          .|.  .....++|+|+.+.|||+..+  ..+.+.|+||..+..
T Consensus       208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                222  123569999999999999643  136799999998853

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.13  E-value=0.0075  Score=60.58  Aligned_cols=73  Identities=16%  Similarity=0.187  Sum_probs=46.7

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEecc
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS  194 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~  194 (437)
                      .+.|+.|-...+|++....++..+++|+........-....|..+++.+...++. |   ++++.+.  +.  +||||++
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~-P---~ll~~~~--~G--~v~e~I~  184 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIA-K---KIYVFFT--NG--RIEEFMD  184 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSB-C---CEEEEET--TE--EEEECCC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCC-C---CEEEEeC--Ce--EEEEeeC
Confidence            4567888889999997654457899998754322222236799999999876542 3   3444442  32  5999997


Q ss_pred             C
Q psy11727        195 Y  195 (437)
Q Consensus       195 ~  195 (437)
                      |
T Consensus       185 G  185 (458)
T 2qg7_A          185 G  185 (458)
T ss_dssp             S
T ss_pred             C
Confidence            6

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.13  E-value=0.0048  Score=57.70  Aligned_cols=77  Identities=9%  Similarity=0.024  Sum_probs=53.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhc-CCCCCcEEEecceeeECCEEEE
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKA-DIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~-~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +..-++.+|.|..+.||+... .+|+.|.+|+-..... ....+..|...++.+... .+..|-++.   +  +.  -++
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~---~--~~--~~l   87 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG---W--DD--RTL   87 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE---E--ET--TEE
T ss_pred             CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe---c--cC--ceE
Confidence            345578899999999999975 5678899998754332 234577899999998653 344444432   2  22  368


Q ss_pred             EEEeccC
Q psy11727        189 VFELLSY  195 (437)
Q Consensus       189 V~E~~~~  195 (437)
                      |||++.+
T Consensus        88 v~e~l~~   94 (288)
T 3f7w_A           88 AMEWVDE   94 (288)
T ss_dssp             EEECCCC
T ss_pred             EEEeecc
Confidence            9999854

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.84  E-value=0.012  Score=56.61  Aligned_cols=70  Identities=13%  Similarity=0.189  Sum_probs=45.4

Q ss_pred             cccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCC-CCcEEEec-c--eeeECCEEEEEEEecc
Q psy11727        119 GKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH-SRYIVKLK-G--HFTWKNHLCLVFELLS  194 (437)
Q Consensus       119 G~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~-h~~iv~l~-~--~~~~~~~~~lV~E~~~  194 (437)
                      |.|....||++.. .+| .+++|+.....     ...|..+++.+...++. -|.++... +  +....+..++||++++
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCcc-----chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            4444678999964 344 89999876433     24678888888776654 34333321 1  1234678899999997


Q ss_pred             C
Q psy11727        195 Y  195 (437)
Q Consensus       195 ~  195 (437)
                      |
T Consensus       105 G  105 (339)
T 3i1a_A          105 A  105 (339)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.80  E-value=0.027  Score=56.00  Aligned_cols=72  Identities=13%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             eceecccCceEEEEEEEcC-------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+.|+.|....||++....       ++..+++|+.... ........|..+++.+...++. |-+   ++.+.  +  .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~-P~l---~~~~~--~--g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLG-PKL---YGIFS--G--G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSS-SCE---EEEET--T--E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCC-CcE---EEEeC--C--C
Confidence            4567888889999997643       2578999998432 1114556799999999877653 433   33333  2  2


Q ss_pred             EEEEeccC
Q psy11727        188 LVFELLSY  195 (437)
Q Consensus       188 lV~E~~~~  195 (437)
                      +|+||++|
T Consensus       149 ~v~e~l~G  156 (429)
T 1nw1_A          149 RLEEYIPS  156 (429)
T ss_dssp             EEECCCCE
T ss_pred             EEEEEeCC
Confidence            89999976

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.01  E-value=0.028  Score=50.09  Aligned_cols=100  Identities=13%  Similarity=0.012  Sum_probs=63.9

Q ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCcccccc
Q psy11727        196 NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL-SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYI  274 (437)
Q Consensus       196 ~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~L-H~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~~~~~~  274 (437)
                      +|.+.|...+ .+++++++|.++.|.+.+|.-+ +...  -..+=+.|..|++  ..+|.|.+.+ +.+.         .
T Consensus        34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~--~~~~i~~~~~i~l--~~dG~V~f~~-~~s~---------~   98 (229)
T 2yle_A           34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQ--PRHRVRSAAQIRV--WRDGAVTLAP-AADD---------A   98 (229)
T ss_dssp             EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCSGGGEEE--ETTSCEEECC-C-------------
T ss_pred             cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhccc--CCceecCCcceEE--ecCCceeccc-cccc---------c
Confidence            6888887765 6899999999999999998776 2111  1234455788999  5677776653 2211         1


Q ss_pred             ccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCC
Q psy11727        275 QSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEP  311 (437)
Q Consensus       275 gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~  311 (437)
                      ....+.|||... ...+.+.=|||||+++|..+--..
T Consensus        99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL  134 (229)
T 2yle_A           99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL  134 (229)
T ss_dssp             --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred             cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence            233467888763 244677889999999999987443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.71  E-value=0.081  Score=52.39  Aligned_cols=73  Identities=12%  Similarity=0.166  Sum_probs=49.1

Q ss_pred             eceecccCceEEEEEEEcCC-------CeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEE-------KCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~-------~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++.|..|-...+|++.....       +..+++|+........-...+|..+++.+...++ .|-++   +.+  .+  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-~P~l~---~~~--~~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-APNII---ADF--PE--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-SCCEE---EEE--TT--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-CCCEE---EEc--CC--C
Confidence            45667788888999976521       5789999875443333345679999999987776 34444   222  23  6


Q ss_pred             EEEEeccC
Q psy11727        188 LVFELLSY  195 (437)
Q Consensus       188 lV~E~~~~  195 (437)
                      +||||++|
T Consensus       147 ~I~efI~G  154 (424)
T 3mes_A          147 RIEEFIDG  154 (424)
T ss_dssp             EEEECCCS
T ss_pred             EEEEEeCC
Confidence            89999977

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.26  E-value=0.67  Score=45.25  Aligned_cols=33  Identities=30%  Similarity=0.447  Sum_probs=26.4

Q ss_pred             CCeeeCCCCCCcEEEec----CCCCCEEEEeCCCcee
Q psy11727        233 LSIIHCDLKPENILLCS----PKRSAIKIIDFGSSCH  265 (437)
Q Consensus       233 ~giiHrDiKp~NIll~~----~~~~~ikL~DFG~s~~  265 (437)
                      ..++|+|+.+.|||+..    ++...+.++||..|..
T Consensus       244 ~vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            34789999999999953    3456799999999854

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=82.35  E-value=2.3  Score=37.55  Aligned_cols=114  Identities=11%  Similarity=0.139  Sum_probs=76.5

Q ss_pred             CCCcEEEecceeeECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        169 HSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      .||+++.. ..-+..+.+.+.++.-+ +.-+..++     .++....++++.+|+....++++    =+|--|.|+||++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGEEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceEEE
Confidence            66777755 44556677777776654 32232233     36789999999999998877774    3889999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCC
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLF  313 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf  313 (437)
                        +.++.+++.-.|....              ++|.     .++...=+-.+=|++..+++++..|
T Consensus       113 --~~~~~p~i~~RGik~~--------------l~P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          113 --TRDGLPIAKTRGLQNV--------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             --CTTSCEEESCCEETTT--------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             --cCCCCEEEEEccCccC--------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence              8888899877665311              2221     1222222334677888888887776

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=81.76  E-value=3.7  Score=36.37  Aligned_cols=112  Identities=16%  Similarity=0.185  Sum_probs=74.4

Q ss_pred             CCCcEEEecceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-HhcCCCCCeeeCCCCCCcEE
Q psy11727        169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA-FLSSPELSIIHCDLKPENIL  246 (437)
Q Consensus       169 ~h~~iv~l~~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~-~LH~~~~giiHrDiKp~NIl  246 (437)
                      .||++  -...-.+.+.+.+.++.-++ .-+..++.     ++....++++.+|+.... +++.    -+|--|.|+||+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~  116 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLM  116 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEE
Confidence            55666  22333667888888877633 34444432     688999999999999887 6664    488899999999


Q ss_pred             EecCCCCCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcch-HHHHHHHHHHHHhCCCCC
Q psy11727        247 LCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAID-MWSLGCILVELHTGEPLF  313 (437)
Q Consensus       247 l~~~~~~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D-vwSlG~il~elltg~~pf  313 (437)
                      +  +.++.++|.-.|.-              .-++|.-     .+ ..| +-++=|++..++.++.-|
T Consensus       117 f--~~~~~p~i~hRGi~--------------~~lpP~e-----~~-ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          117 F--NRALEPFFLHVGVK--------------ESLPPDE-----WD-DERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             E--CTTCCEEESCCEET--------------TTBSSCS-----CC-HHHHHHHHHHHHHHHTTCSSCH
T ss_pred             E--eCCCcEEEEEcCCc--------------ccCCCCC-----CC-HHHHHHHHHHHHHHHHcCCCCH
Confidence            9  78888999877753              1223321     11 223 334667777777776655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	437
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-61
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-59
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-56
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-54
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-54
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-54
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-53
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-53
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-53
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-52
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-52
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-51
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-51
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-51
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-51
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-50
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-49
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-48
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-48
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-47
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-47
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-05
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-46
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-46
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-46
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-45
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-45
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-45
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-45
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.002
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-44
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-43
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-43
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-43
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-43
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-42
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-40
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-39
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-39
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-38
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-37
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.001
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-37
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-37
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-36
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-36
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-35
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-35
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-34
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.001
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-34
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-33
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-33
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-32
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-32
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-32
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-31
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-31
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-31
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-30
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-29
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-29
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-29
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-28
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-25
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-17

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 5e-61
 Identities = 72/328 (21%), Positives = 123/328 (37%), Gaps = 33/328 (10%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKAD 167
           D +E  + LG G+ G V K         +A K+I    K    NQ   E+Q+L + N   
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--- 62

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
             S YIV   G F     + +  E +     + +       +   +  K +  +   L +
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTY 119

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL-YQYIQSRYYRSPEVLL 286
           L   +  I+H D+KP NIL+ S     IK+ DFG S  +  ++   ++ +R Y SPE L 
Sbjct: 120 LRE-KHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQ 176

Query: 287 GIPYDLAIDMWSLGCILVELHTGEPLFSGKN-EVDQMTKIIEVLGMPPGYLLHGASKTSK 345
           G  Y +  D+WS+G  LVE+  G       + +  ++    +V G          +    
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236

Query: 346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKD 405
                 D+               P     + +  + N  P                 F+D
Sbjct: 237 LSSYGMDS--------------RPPMAIFELLDYIVNEPPPKLPSGVFSLE------FQD 276

Query: 406 LILRMLTYDPKKRISPTNVLRHEFFLKH 433
            + + L  +P +R     ++ H F  + 
Sbjct: 277 FVNKCLIKNPAERADLKQLMVHAFIKRS 304

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  194 bits (494), Expect = 7e-59
 Identities = 105/352 (29%), Positives = 159/352 (45%), Gaps = 43/352 (12%)

Query: 100 YIIKHGEKFLD-RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ 158
           +    GE + D RY +   LG G F  V  A D      VA+KI++  K +   A+ E++
Sbjct: 2   HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK 61

Query: 159 LLEKINKADI------HSRYIVKLKGHFTWKN----HLCLVFELLSYNLYNLIRNTNFHG 208
           LL+++N AD        + +I+KL  HF  K     H+ +VFE+L  NL  LI+     G
Sbjct: 62  LLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG 121

Query: 209 VSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL----CSPKRSAIKIIDFGSSC 264
           + L   K+ ++QL   L ++      IIH D+KPEN+L+           IKI D G++C
Sbjct: 122 IPLIYVKQISKQLLLGLDYM-HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 180

Query: 265 HVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGK------NE 318
              +     IQ+R YRSPEVLLG P+    D+WS  C++ EL TG+ LF          +
Sbjct: 181 WYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240

Query: 319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTIL 378
            D + +IIE+LG  P YLL     T  +F+       + K      ++ L    +     
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300

Query: 379 GVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             +                       D +  ML  DP+KR     ++ H + 
Sbjct: 301 AKE---------------------ISDFLSPMLQLDPRKRADAGGLVNHPWL 331

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (471), Expect = 3e-56
 Identities = 97/329 (29%), Positives = 147/329 (44%), Gaps = 50/329 (15%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           ++ ++    +G+G++G V KA +      VA+K I+     +   + A  E+ LL+++N 
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                  IVKL      +N L LVFE L  +L   +  +   G+ L L K +  QL   L
Sbjct: 60  ----HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTL---YQYIQSRYYRSP 282
           AF  S    ++H DLKP+N+L+      AIK+ DFG +   G  +      + + +YR+P
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLI--NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171

Query: 283 EVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           E+LLG  Y   A+D+WSLGCI  E+ T   LF G +E+DQ+ +I   LG P   +  G +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231

Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM 401
               Y                                      P   R++          
Sbjct: 232 SMPDYKPSF----------------------------------PKWARQDFSKVVPPLDE 257

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
             + L+ +ML YDP KRIS    L H FF
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 2e-54
 Identities = 87/333 (26%), Positives = 140/333 (42%), Gaps = 49/333 (14%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQ-VAIKIIK---NKKPFLNQAQIEVQLLEK 162
           +   +YE    +G+G++G+V KA D +   + VA+K ++    ++        EV +L  
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 163 INKADIHSRYIVKLKGHFTW-----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF 217
           +         +V+L    T      +  L LVFE +  +L   +      GV     K  
Sbjct: 64  LET--FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 121

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
             QL   L FL S    ++H DLKP+NIL+ S  +  +              L   + + 
Sbjct: 122 MFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 179

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
           +YR+PEVLL   Y   +D+WS+GCI  E+   +PLF G ++VDQ+ KI++V+G+P     
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239

Query: 338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSL 397
                  +          + K  TD  +                                
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDEL------------------------------- 268

Query: 398 ADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                 KDL+L+ LT++P KRIS  + L H +F
Sbjct: 269 -----GKDLLLKCLTFNPAKRISAYSALSHPYF 296

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  181 bits (461), Expect = 4e-54
 Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 11/249 (4%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLL 160
           IKH    LD Y+I   LG G+FG V +  +       A K +           + E+Q +
Sbjct: 19  IKHDH-VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 77

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
             +         +V L   F   N + +++E +S            + +S +   ++ +Q
Sbjct: 78  SVLR-----HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 132

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRY 278
           +C  L  +   E + +H DLKPENI+  + + + +K+IDFG + H+   Q++     +  
Sbjct: 133 VCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 190

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH 338
           + +PEV  G P     DMWS+G +   L +G   F G+N+ + +  +             
Sbjct: 191 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 250

Query: 339 GASKTSKYF 347
           G S+  K F
Sbjct: 251 GISEDGKDF 259

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            KD I ++L  DP  R++    L H + 
Sbjct: 256 GKDFIRKLLLADPNTRMTIHQALEHPWL 283

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 4e-54
 Identities = 83/319 (26%), Positives = 131/319 (41%), Gaps = 45/319 (14%)

Query: 117 LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK-ADIHSRYIVK 175
            LG+G F  V KA D      VAIK IK       +  I    L +I    ++    I+ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 176 LKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
           L   F  K+++ LVF+ +  +L  +I++ N   ++ +  K +       L +L      I
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW--I 121

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSPEVLLGI-PYD 291
           +H DLKP N+LL       +K+ DFG +   G   +     + +R+YR+PE+L G   Y 
Sbjct: 122 LHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179

Query: 292 LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLS 351
           + +DMW++GCIL EL    P   G +++DQ+T+I E LG P             Y    S
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239

Query: 352 DNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRML 411
                L        +                                      DLI  + 
Sbjct: 240 FPGIPLHHIFSAAGD-----------------------------------DLLDLIQGLF 264

Query: 412 TYDPKKRISPTNVLRHEFF 430
            ++P  RI+ T  L+ ++F
Sbjct: 265 LFNPCARITATQALKMKYF 283

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 1e-53
 Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 46/327 (14%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI- 168
             Y    ++G GSFG V +A   +    VAIK +   K F N+   E+Q++ K++  +I 
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIV 76

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNL--TKKFAQQLCCALA 226
             RY     G    + +L LV + +   +Y + R+ +    +L +   K +  QL  +LA
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSPEV 284
           ++ S    I H D+KP+N+LL  P  + +K+ DFGS+  +  G+    YI SRYYR+PE+
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLD-PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193

Query: 285 LLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT 343
           + G   Y  +ID+WS GC+L EL  G+P+F G + VDQ+ +II+VLG P    +    + 
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR---EM 250

Query: 344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKF 403
           +  +             T   + R P                                  
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPE-------------------------------A 279

Query: 404 KDLILRMLTYDPKKRISPTNVLRHEFF 430
             L  R+L Y P  R++P     H FF
Sbjct: 280 IALCSRLLEYTPTARLTPLEACAHSFF 306

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 3e-53
 Identities = 91/343 (26%), Positives = 144/343 (41%), Gaps = 38/343 (11%)

Query: 97  NYDYIIKHGEKF---LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQA 153
           N  Y ++ G+     L RY+    +G G+ G V  A+D      VAIK +   +PF NQ 
Sbjct: 1   NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS--RPFQNQT 58

Query: 154 QIEVQLLEKINKADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFH 207
             +    E +    ++ + I+ L   FT +        + LV EL+  NL  +I+     
Sbjct: 59  HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----M 114

Query: 208 GVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG 267
            +          Q+ C +  L S    IIH DLKP NI++ S     I       +    
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172

Query: 268 QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
             +  Y+ +RYYR+PEV+LG+ Y   +D+WS+GCI+ E+   + LF G++ +DQ  K+IE
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232

Query: 328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGG 387
            LG P    +     T + +         L           P     + +          
Sbjct: 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ------ 286

Query: 388 RRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                           +DL+ +ML  DP KRIS  + L+H + 
Sbjct: 287 ---------------ARDLLSKMLVIDPAKRISVDDALQHPYI 314

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (452), Expect = 4e-53
 Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 50/336 (14%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           + +YE    +G+G+FG+V KA   +   +VA+K +     K+ F   A  E+++L+ +  
Sbjct: 9   VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 68

Query: 166 ADIHSRY---IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLC 222
            ++ +       K   +   K  + LVF+   ++L  L+ N      +L+  K+  Q L 
Sbjct: 69  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLL 127

Query: 223 CALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-------QTLYQYIQ 275
             L ++   +  I+H D+K  N+L+   +   +K+ DFG +                 + 
Sbjct: 128 NGLYYIHRNK--ILHRDMKAANVLIT--RDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 276 SRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG 334
           + +YR PE+LLG   Y   ID+W  GCI+ E+ T  P+  G  E  Q+  I ++ G    
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT- 242

Query: 335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPG 394
                                          E  P     +    ++      R+  +  
Sbjct: 243 ------------------------------PEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 395 HSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
            +        DLI ++L  DP +RI   + L H+FF
Sbjct: 273 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  175 bits (443), Expect = 3e-52
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 52/329 (15%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINK 165
           +++Y     +G+G++G V KA ++  +   A+K I+ +K      +    E+ +L+++  
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELK- 58

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                  IVKL      K  L LVFE L  +L  L+      G+     K F  QL   +
Sbjct: 59  ----HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGI 113

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG---QTLYQYIQSRYYRSP 282
           A+       ++H DLKP+N+L+       +KI DFG +   G   +     I + +YR+P
Sbjct: 114 AYCHDR--RVLHRDLKPQNLLINREGE--LKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169

Query: 283 EVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS 341
           +VL+G   Y   ID+WS+GCI  E+  G PLF G +E DQ+ +I  +LG P        +
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229

Query: 342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYM 401
           +  KY                T  E LP    L  +                        
Sbjct: 230 ELPKYDPNF------------TVYEPLPWESFLKGLD----------------------E 255

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              DL+ +ML  DP +RI+    L H +F
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  176 bits (448), Expect = 4e-52
 Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 13/250 (5%)

Query: 102 IKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLL 160
           +K G  + D Y+I   LG G+FG V +  +         K I    P      + E+ ++
Sbjct: 22  VKQGSVY-DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM 80

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQ 219
            +++        ++ L   F  K  + L+ E LS   L++ I   + + +S      + +
Sbjct: 81  NQLH-----HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMR 134

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSR 277
           Q C  L  +     SI+H D+KPENI+  + K S++KIIDFG +  +   + +     + 
Sbjct: 135 QACEGLKHMHE--HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 192

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL 337
            + +PE++   P     DMW++G +   L +G   F+G+++++ +  +            
Sbjct: 193 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 252

Query: 338 HGASKTSKYF 347
              S  +K F
Sbjct: 253 SSVSPEAKDF 262

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 1e-51
 Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 48/333 (14%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINKAD 167
            RY   + +G+G++G V  A+D+  K +VAIK I     + +  +   E+++L +    +
Sbjct: 8   PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 67

Query: 168 IHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
           I     +           + LV  L+  +LY L++      +S +    F  Q+   L +
Sbjct: 68  IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKY 124

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG------QTLYQYIQSRYYRS 281
           + S   +++H DLKP N+LL +     +KI DFG +            L +Y+ +R+YR+
Sbjct: 125 IHS--ANVLHRDLKPSNLLLNTTCD--LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 180

Query: 282 PEVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           PE++L    Y  +ID+WS+GCIL E+ +  P+F GK+ +DQ+  I+ +LG P    L+  
Sbjct: 181 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 240

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
                    LS             K ++P ++                            
Sbjct: 241 INLKARNYLLS----------LPHKNKVPWNRLFPNA----------------------D 268

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
            K  DL+ +MLT++P KRI     L H +  ++
Sbjct: 269 SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (438), Expect = 5e-51
 Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 11/245 (4%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           ++  ++Y I   LG+G FG V +  +   K     K +K K       + E+ +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                R I+ L   F     L ++FE +S  +++  I  + F  ++      +  Q+C A
Sbjct: 60  ----HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEA 114

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYIQSRYYRSP 282
           L FL S   +I H D++PENI+  + + S IKII+FG +  +  G        +  Y +P
Sbjct: 115 LQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAP 172

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK 342
           EV        A DMWSLG ++  L +G   F  +     +  I+              S 
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI 232

Query: 343 TSKYF 347
            +  F
Sbjct: 233 EAMDF 237

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
             D + R+L  + K R++ +  L+H +  + 
Sbjct: 234 AMDFVDRLLVKERKSRMTASEALQHPWLKQK 264

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (439), Expect = 6e-51
 Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 44/335 (13%)

Query: 101 IIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEV 157
           + K   +    Y     +G G++G V  A D     +VAIK +      + F  +A  E+
Sbjct: 9   VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL 68

Query: 158 QLLEKINKADIHSRY-IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKK 216
           +LL+ +   ++     +              LV   +  +L  L+++        +  + 
Sbjct: 69  RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKL---GEDRIQF 125

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQS 276
              Q+   L ++ +    IIH DLKP N+ +   +   +KI+DFG +      +  Y+ +
Sbjct: 126 LVYQMLKGLRYIHA--AGIIHRDLKPGNLAVN--EDCELKILDFGLARQADSEMTGYVVT 181

Query: 277 RYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY 335
           R+YR+PEV+L    Y   +D+WS+GCI+ E+ TG+ LF G + +DQ+ +I++V G PP  
Sbjct: 182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP-- 239

Query: 336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGH 395
                   +++  RL  +            E+   +  L                     
Sbjct: 240 --------AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA------------------ 273

Query: 396 SLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
                    +L+ +ML  D ++R++    L H +F
Sbjct: 274 ----SPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 7e-51
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 17/234 (7%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKIN 164
           L+ +EI   LGKG FG V  A + + K  +A+K++      K    +Q + EV++   + 
Sbjct: 5   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 63

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                   I++L G+F     + L+ E      +Y  ++  +        T  +  +L  
Sbjct: 64  ----RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELAN 117

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
           AL++  S    +IH D+KPEN+LL S     +KI DFG S H   +       +  Y  P
Sbjct: 118 ALSYCHS--KRVIHRDIKPENLLLGSAGE--LKIADFGWSVHAPSSRRTTLCGTLDYLPP 173

Query: 283 EVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           E++ G  +D  +D+WSLG +  E   G+P F      +   +I  V    P ++
Sbjct: 174 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 227

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 4e-06
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
            +DLI R+L ++P +R     VL H +   +S
Sbjct: 231 ARDLISRLLKHNPSQRPMLREVLEHPWITANS 262

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 2e-50
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADI 168
           D +EI   LG G+FG+V KA + E     A K+I  K    L    +E+ +L   +    
Sbjct: 12  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD---- 67

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
               IVKL   F ++N+L ++ E  +    + +       ++ +  +   +Q   AL +L
Sbjct: 68  -HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVL 285
              +  IIH DLK  NIL        IK+ DFG S       Q    +I + Y+ +PEV+
Sbjct: 127 --HDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV 182

Query: 286 LGI-----PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +       PYD   D+WSLG  L+E+   EP     N +  + KI +
Sbjct: 183 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  167 bits (423), Expect = 7e-49
 Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 45/360 (12%)

Query: 83  KEKKYVHNDGHDDENYDYIIKHGEKF--LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAI 140
           + + Y   + H    Y     H  ++   D Y++   LG+G + +V +A +     +V +
Sbjct: 6   RARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVV 65

Query: 141 KIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNL 200
           KI+K  K    + + E+++LE +         I+ L                   N  + 
Sbjct: 66  KILKPVK--KKKIKREIKILENLR----GGPNIITLADIVKDPVSRTPALVFEHVNNTDF 119

Query: 201 IRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF 260
            +   +  ++    + +  ++  AL +     + I+H D+KP N+++    R  +++ID+
Sbjct: 120 KQ--LYQTLTDYDIRFYMYEILKALDYC--HSMGIMHRDVKPHNVMIDHEHRK-LRLIDW 174

Query: 261 GSSCHV--GQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGE-PLFSGK 316
           G +     GQ     + SRY++ PE+L+    YD ++DMWSLGC+L  +   + P F G 
Sbjct: 175 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 234

Query: 317 NEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDT 376
           +  DQ+ +I +VLG    Y                             K  +    R + 
Sbjct: 235 DNYDQLVRIAKVLGTEDLY-------------------------DYIDKYNIELDPRFND 269

Query: 377 ILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHSVD 436
           ILG  +     R  +     L    +  D + ++L YD + R++    + H +F  ++V 
Sbjct: 270 ILGRHSRKRWERFVHSENQHLVSP-EALDFLDKLLRYDHQSRLTAREAMEHPYF--YTVV 326

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 4e-48
 Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 54/337 (16%)

Query: 107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKI 163
           +  +RY+  + +G G++G V  AFD +   +VA+K +           +   E++LL+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 164 NKADIHSRYIVKLKGHFTWK------NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKF 217
                    ++ L   FT        N + LV  L+  +L N+++         +  +  
Sbjct: 75  K-----HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFL 126

Query: 218 AQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR 277
             Q+   L ++ S    IIH DLKP N+ +       +KI+DFG + H    +  Y+ +R
Sbjct: 127 IYQILRGLKYIHSA--DIIHRDLKPSNLAVNEDCE--LKILDFGLARHTDDEMTGYVATR 182

Query: 278 YYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           +YR+PE++L  + Y+  +D+WS+GCI+ EL TG  LF G + +DQ+  I+ ++G P   L
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242

Query: 337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHS 396
           L   S  S      S          +      P                           
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANP--------------------------- 275

Query: 397 LADYMKFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
                   DL+ +ML  D  KRI+    L H +F ++
Sbjct: 276 -----LAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 7e-48
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 52/330 (15%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK---NKKPFLNQAQIEVQLLEKINK 165
           + +YE    +G+G++G V KA + E    VA+K ++   + +   + A  E+ LL+++  
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK- 59

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                + IV+L         L LVFE    +L     + N   +   + K F  QL   L
Sbjct: 60  ----HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGL 114

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSP 282
            F  S   +++H DLKP+N+L+       +K+ +FG +       +     + + +YR P
Sbjct: 115 GFCHSR--NVLHRDLKPQNLLINRNGE--LKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170

Query: 283 EVLLGIP-YDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHGA 340
           +VL G   Y  +IDMWS GCI  EL     PLF G +  DQ+ +I  +LG P        
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230

Query: 341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY 400
           +K   Y        Y +  +T +    +P                               
Sbjct: 231 TKLPDY------KPYPMYPATTSLVNVVPKLNAT-------------------------- 258

Query: 401 MKFKDLILRMLTYDPKKRISPTNVLRHEFF 430
              +DL+  +L  +P +RIS    L+H +F
Sbjct: 259 --GRDLLQNLLKCNPVQRISAEEALQHPYF 286

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 5e-47
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 13/234 (5%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           +K  + ++   +LG+GSF  VV A +     + AIKI++ K+  + + ++     E+   
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVM 62

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
           + +   + VKL   F     L           L   IR           T+ +  ++  A
Sbjct: 63  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 120

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ-----TLYQYIQSRYY 279
           L +L      IIH DLKPENILL       I+I DFG++  +           ++ +  Y
Sbjct: 121 LEYLHGKG--IIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESKQARANSFVGTAQY 176

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
            SPE+L       + D+W+LGCI+ +L  G P F   NE     KII++    P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 9e-05
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           K +DL+ ++L  D  KR+    +  +     H
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 267

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  161 bits (409), Expect = 7e-47
 Identities = 76/251 (30%), Positives = 112/251 (44%), Gaps = 15/251 (5%)

Query: 103 KHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLL 160
           K  E   D Y+   +LG G+F +V+ A D   +  VAIK I  K     +  +  E+ +L
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQ 219
            KI         IV L   +    HL L+ +L+S   L++ I    F+  +     +   
Sbjct: 62  HKIK-----HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIF 114

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV--GQTLYQYIQS 276
           Q+  A+ +L      I+H DLKPEN+L  S  + S I I DFG S     G  L     +
Sbjct: 115 QVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 172

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y +PEVL   PY  A+D WS+G I   L  G P F  +N+     +I++         
Sbjct: 173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPY 232

Query: 337 LHGASKTSKYF 347
               S ++K F
Sbjct: 233 WDDISDSAKDF 243

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            KD I  ++  DP+KR +    L+H + 
Sbjct: 240 AKDFIRHLMEKDPEKRFTCEQALQHPWI 267

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (407), Expect = 1e-46
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 15/221 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKII-KNKKPFLNQAQIEVQLLEKINKADI 168
            +Y     +G+G+ G V  A D     +VAI+ +   ++P       E+ ++ +      
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN----- 74

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            +  IV     +   + L +V E L+     L        +         ++   AL FL
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEFL 132

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEVL 285
            S    +IH D+K +NILL       +K+ DFG    +          + + Y+ +PEV+
Sbjct: 133 HS--NQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
               Y   +D+WSLG + +E+  GEP +  +N +  +  I 
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
           F+D + R L  D +KR S   +L+H+F 
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFL 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  159 bits (404), Expect = 1e-46
 Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 29/259 (11%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----------FLNQAQIEV 157
           F + YE   +LG+G    V +        + A+KII                      EV
Sbjct: 1   FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 60

Query: 158 QLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKK 216
            +L K++        I++LK  +       LVF+L+    L++ +       +S   T+K
Sbjct: 61  DILRKVS----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 114

Query: 217 FAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV--GQTLYQYI 274
             + L   +  L    L+I+H DLKPENILL       IK+ DFG SC +  G+ L +  
Sbjct: 115 IMRALLEVICALHK--LNIVHRDLKPENILLDDDMN--IKLTDFGFSCQLDPGEKLREVC 170

Query: 275 QSRYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV 328
            +  Y +PE++          Y   +DMWS G I+  L  G P F  + ++  +  I+  
Sbjct: 171 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 230

Query: 329 LGMPPGYLLHGASKTSKYF 347
                       S T K  
Sbjct: 231 NYQFGSPEWDDYSDTVKDL 249

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 3e-46
 Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 107 KFLDRYEI-DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
             +D Y++   +LG G  G+V++ F+   + + A+K++++      + ++  +       
Sbjct: 8   AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS----- 62

Query: 166 ADIHSRYIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                 +IV++   +      +  L +V E L    L++ I++      +     +  + 
Sbjct: 63  ---QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 119

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHV--GQTLYQYIQSR 277
           +  A+ +L S  ++I H D+KPEN+L  S + +A +K+ DFG +       +L     + 
Sbjct: 120 IGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 177

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           YY +PEVL    YD + DMWSLG I+  L  G P F   + +     +   + M  
Sbjct: 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 233

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKHS 434
            K LI  +L  +P +R++ T  + H + ++ +
Sbjct: 248 VKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 2e-45
 Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 20/228 (8%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKINK 165
           F++ +++   LG+G++G+V  A +   +  VA+KI+  K+       I  E+ + + +N 
Sbjct: 3   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN- 61

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNL-YNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                  +VK  GH    N   L  E  S    ++ I      G+     ++F  QL   
Sbjct: 62  ----HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAG 115

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-----QTLYQYIQSRYY 279
           + +L    + I H D+KPEN+LL    R  +KI DFG +         + L +   +  Y
Sbjct: 116 VVYLHG--IGITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171

Query: 280 RSPEVLLGIPYD-LAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
            +PE+L    +    +D+WS G +L  +  GE  +   ++  Q     
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 4e-45
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 15/229 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           + YE+   +G GS+G+  K     +   +  K +      + +A+ ++ + E     ++ 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELK 61

Query: 170 SRYIVKLKGHFTWK--NHLCLVFELLSY-NLYNLIRNTNFHGVSLN--LTKKFAQQLCCA 224
              IV+       +    L +V E     +L ++I         L+     +   QL  A
Sbjct: 62  HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 225 LAFL---SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT---LYQYIQSRY 278
           L      S    +++H DLKP N+ L   +   +K+ DFG +  +         ++ + Y
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQN--VKLGDFGLARILNHDTSFAKAFVGTPY 179

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           Y SPE +  + Y+   D+WSLGC+L EL    P F+  ++ +   KI E
Sbjct: 180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 228

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEF 429
             ++I RML      R S   +L +  
Sbjct: 242 LNEIITRMLNLKDYHRPSVEEILENPL 268

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  156 bits (395), Expect = 8e-45
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           L  ++I   LG GSFG+V            A+K++K K+  +   Q+E    E++  + +
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 61

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
              +I+++ G F     + ++ + +       +   +       + K +A ++C AL +L
Sbjct: 62  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYL 120

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI 288
            S    II+ DLKPENILL       IKI DFG + +V    Y    +  Y +PEV+   
Sbjct: 121 HSK--DIIYRDLKPENILLDK--NGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTK 176

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           PY+ +ID WS G ++ E+  G   F   N +    KI+ 
Sbjct: 177 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 215

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 9e-45
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 10/232 (4%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ + +  +LGKGSFG+V  A   +     AIK +K     ++       + +++     
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              ++  +   F  K +L  V E L+  +L   I++   H   L+    +A ++   L F
Sbjct: 61  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQF 118

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L      I++ DLK +NILL       IKI DFG              +  +  Y +PE+
Sbjct: 119 L--HSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI 174

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
           LLG  Y+ ++D WS G +L E+  G+  F G++E +    I       P +L
Sbjct: 175 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWL 226

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 403 FKDLILRMLTYDPKKRISPTN-VLRHEFF 430
            KDL++++   +P+KR+     + +H  F
Sbjct: 230 AKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  154 bits (391), Expect = 2e-44
 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 18/229 (7%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLE 161
           +     +     +G GSFG V  A D      VAIK +                EV+ L+
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
           K     +     ++ +G +  ++   LV E    +  +L+       +            
Sbjct: 71  K-----LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGA 124

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRS 281
              LA+L S   ++IH D+K  NILL  P    +K+ DFGS+  +      ++ + Y+ +
Sbjct: 125 LQGLAYLHS--HNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAPA-NSFVGTPYWMA 179

Query: 282 PEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           PEV+L +    YD  +D+WSLG   +EL   +P     N +  +  I +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFFLKH 433
           F++ +   L   P+ R +   +L+H F L+ 
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 1e-43
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 12/228 (5%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSR 171
            + D  +G+GSF  V K  D E   +VA   ++++K  L +++ +    E      +   
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHP 68

Query: 172 YIVKLKGHF----TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
            IV+    +      K  + LV EL++   L   ++   F  + + + + + +Q+   L 
Sbjct: 69  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQ 126

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ-YIQSRYYRSPEVL 285
           FL +    IIH DLK +NI +  P  S +KI D G +     +  +  I +  + +PE+ 
Sbjct: 127 FLHTRTPPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRASFAKAVIGTPEFMAPEMY 185

Query: 286 LGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
               YD ++D+++ G  ++E+ T E  +S      Q+ + +     P 
Sbjct: 186 EE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 232

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 402 KFKDLILRMLTYDPKKRISPTNVLRHEFF 430
           + K++I   +  +  +R S  ++L H FF
Sbjct: 241 EVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 4e-43
 Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 15/228 (6%)

Query: 108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLL 160
              +Y++  LLG G FG V       +   VAIK ++  +       P   +  +EV LL
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
           +K++        +++L   F   +   L+ E            T    +   L + F  Q
Sbjct: 62  KKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLY-QYIQSRYY 279
           +  A+         ++H D+K ENIL+    R  +K+IDFGS   +  T+Y  +  +R Y
Sbjct: 119 VLEAVRHC--HNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 175

Query: 280 RSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKII 326
             PE +    Y   +  +WSLG +L ++  G+  F    E+ +     
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF 223

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 6/28 (21%), Positives = 10/28 (35%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            + LI   L   P  R +   +  H + 
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (381), Expect = 5e-43
 Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 9/248 (3%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           E   D Y+    LG G F  V K  +     Q A K IK ++   ++  +  + +E+   
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 166 --ADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
              +I    ++ L   +  K  + L+ EL++              ++     +F +Q+  
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILN 124

Query: 224 ALAFLSSPELSIIHCDLKPENILLCS--PKRSAIKIIDFGSSCHV--GQTLYQYIQSRYY 279
            + +L S +  I H DLKPENI+L      +  IKIIDFG +  +  G        +  +
Sbjct: 125 GVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182

Query: 280 RSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG 339
            +PE++   P  L  DMWS+G I   L +G   F G  + + +  +  V           
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242

Query: 340 ASKTSKYF 347
            S  +K F
Sbjct: 243 TSALAKDF 250

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 403 FKDLILRMLTYDPKKRISPTNVLRHEFF 430
            KD I R+L  DPKKR++  + L+H + 
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (377), Expect = 9e-43
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 15/228 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           +   ++   +GKG FG V+       K  VA+K IKN          E  ++ ++     
Sbjct: 6   MKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDA-TAQAFLAEASVMTQL----- 57

Query: 169 HSRYIVKLKGHFTW-KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALA 226
               +V+L G     K  L +V E ++  +L + +R+     +  +   KF+  +C A+ 
Sbjct: 58  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117

Query: 227 FLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLL 286
           +L     + +H DL   N+L+   + +  K+ DFG +     T         + +PE L 
Sbjct: 118 YLEGN--NFVHRDLAARNVLVS--EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALR 173

Query: 287 GIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
              +    D+WS G +L E+++ G   +      D + ++ +   M  
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA 221

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  149 bits (376), Expect = 2e-42
 Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 22/246 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIK----NKKPFLNQAQIEVQLLEKINK 165
           DRYE+  +LG G   +V  A D      VA+K+++        F  + + E Q    +N 
Sbjct: 7   DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN- 65

Query: 166 ADIHSRYIVKLKGHFTWKNH----LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQ 220
                  IV +      +        +V E +    L +++       ++     +    
Sbjct: 66  ----HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIAD 119

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT----LYQYIQS 276
            C AL F       IIH D+KP NI++ +     +       +              I +
Sbjct: 120 ACQALNFSHQN--GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
             Y SPE   G   D   D++SLGC+L E+ TGEP F+G + V    + +    +PP   
Sbjct: 178 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 237

Query: 337 LHGASK 342
             G S 
Sbjct: 238 HEGLSA 243

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 9e-41
 Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 26/236 (11%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKA 166
            +  +   +G GSFG V K   H +   VA+K++    P    L   + EV +L K    
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-- 62

Query: 167 DIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                 I+   G ++    L +V +     +LY+ +         +      A+Q    +
Sbjct: 63  ---HVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGM 117

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG-----QTLYQYIQSRYYR 280
            +L +   SIIH DLK  NI L       +KI DFG +             Q   S  + 
Sbjct: 118 DYLHAK--SIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173

Query: 281 SPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           +PEV+      PY    D+++ G +L EL TG+  +S  N  DQ+  ++    + P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  144 bits (363), Expect = 2e-40
 Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 21/237 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
             Y++   +G+GSFG + +  +     QVAIK    ++    Q + E +  + +      
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP-RRSDAPQLRDEYRTYKLLA----G 59

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              I  +        H  LV +LL  +L +L+        S+      A+Q+   +  + 
Sbjct: 60  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI- 117

Query: 230 SPELSIIHCDLKPENILL---CSPKRSAIKIIDFGSS----------CHVGQTLYQYIQS 276
             E S+++ D+KP+N L+    S   + I ++DFG                +       +
Sbjct: 118 -HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176

Query: 277 RYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
             Y S    LG       D+ +LG + +    G   + G        K   +     
Sbjct: 177 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  142 bits (360), Expect = 2e-39
 Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 15/232 (6%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ + +  ++G+G FG+V      +     A+K +  K+  +   Q E   L +     +
Sbjct: 3   MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR--IKMKQGETLALNERIMLSL 60

Query: 169 ----HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                  +IV +   F   + L  + +L++  +L+  +        S    + +A ++  
Sbjct: 61  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF--SEADMRFYAAEIIL 118

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT-LYQYIQSRYYRSP 282
            L  + +    +++ DLKP NILL       ++I D G +C   +   +  + +  Y +P
Sbjct: 119 GLEHMHNR--FVVYRDLKPANILLDEHGH--VRISDLGLACDFSKKKPHASVGTHGYMAP 174

Query: 283 EVLL-GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           EVL  G+ YD + D +SLGC+L +L  G   F      D+       L M  
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 226

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  140 bits (354), Expect = 4e-39
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 19/235 (8%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           +RY +   +G GSFG +    D     +VAIK+   K     Q  IE ++ + +      
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQ----G 61

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              I  ++      ++  +V ELL  +L +L    +    SL      A Q+   + ++ 
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 120

Query: 230 SPELSIIHCDLKPENILLCSPKRSA-IKIIDFGSSCHVG----------QTLYQYIQSRY 278
           S   + IH D+KP+N L+   K+   + IIDFG +              +       +  
Sbjct: 121 S--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 178

Query: 279 YRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP 333
           Y S    LGI      D+ SLG +L+  + G   + G     +  K   +     
Sbjct: 179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 233

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  139 bits (350), Expect = 5e-38
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 6/228 (2%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           LD+++    LG GSFG+V+     E     A+KI+  K+  +   QIE  L EK     +
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV 98

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
           +  ++VKL+  F   ++L +V E ++               S    + +A Q+     +L
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGG-EMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGI 288
            S  L +I+ DLKPEN+L+       I++ DFG +  V    +    +    +PE++L  
Sbjct: 158 HS--LDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSK 213

Query: 289 PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL 336
            Y+ A+D W+LG ++ E+  G P F     +    KI+      P + 
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 3e-37
 Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 11/223 (4%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
           ++ ++   LLGKG+FG+V+   +       A+KI++ K+  + + ++   + E     + 
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNT 62

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAF 227
              ++  LK  F   + LC V E  +   L+  +        +    + +  ++  AL +
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEY 120

Query: 228 LSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---GQTLYQYIQSRYYRSPEV 284
           L S    +++ D+K EN++L       IKI DFG        G T+  +  +  Y +PEV
Sbjct: 121 LHSR--DVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176

Query: 285 LLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           L    Y  A+D W LG ++ E+  G   F  ++       I+ 
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 5/33 (15%)

Query: 403 FKDLILRMLTYDPKKRISPTN-----VLRHEFF 430
            K L+  +L  DPK+R+         V+ H FF
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 4e-37
 Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 15/228 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           +   ++  LG+G FG+V     +    +VAIK +K           E Q+++K+      
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL-----R 70

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              +V+L    + +    +   +   +L + ++      + L      A Q+   +A++ 
Sbjct: 71  HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR----YYRSPEVL 285
               + +H DL+  NIL+        K+ DFG +  +    Y   Q       + +PE  
Sbjct: 131 RM--NYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 186

Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
           L   + +  D+WS G +L EL T G   + G    + + ++     MP
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 234

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 8e-37
 Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 17/230 (7%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
           +  ++   LG G FG+V   + +    +VA+K +K      +    E  L++++      
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPDAFLAEANLMKQL-----Q 66

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            + +V+L    T +  + ++ E +   +L + ++  +   +++N     A Q+   +AF+
Sbjct: 67  HQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR----YYRSPEV 284
                + IH DL+  NIL+        KI DFG +  +    Y   +       + +PE 
Sbjct: 126 EER--NYIHRDLRAANILVSDTLS--CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181

Query: 285 LLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
           +    + +  D+WS G +L E+ T G   + G    + +  +     M  
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 231

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  132 bits (334), Expect = 3e-36
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 14/227 (6%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINK 165
           E       +   LG G +G+V +    +    VA+K +K     + +   E  ++++   
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKE--- 69

Query: 166 ADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
             I    +V+L G  T +    ++ E ++Y NL + +R  N   VS  +    A Q+  A
Sbjct: 70  --IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 127

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR----YYR 280
           + +L     + IH DL   N L+       +K+ DFG S  +    Y           + 
Sbjct: 128 MEYLEKK--NFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183

Query: 281 SPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIE 327
           +PE L    + +  D+W+ G +L E+ T         ++ Q+ +++E
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 230

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 4e-36
 Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 15/229 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
                   +G G FG V   +    K +VAIK I+           E +++ K+      
Sbjct: 5   SELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----S 58

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              +V+L G    +  +CLVFE + +   +    T     +          +C  +A+L 
Sbjct: 59  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ----SRYYRSPEVL 285
                +IH DL   N L+       IK+ DFG +  V    Y           + SPEV 
Sbjct: 119 EA--CVIHRDLAARNCLVGE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174

Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
               Y    D+WS G ++ E+ + G+  +  ++  + +  I     +  
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 3e-35
 Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 15/229 (6%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
                   LG G FG V       +   VAIK+IK      ++   E +++  +      
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQY-DVAIKMIKEGSMSEDEFIEEAKVMMNL-----S 57

Query: 170 SRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLS 229
              +V+L G  T +  + ++ E ++            H        +  + +C A+ +L 
Sbjct: 58  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117

Query: 230 SPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQ----YIQSRYYRSPEVL 285
           S     +H DL   N L+       +K+ DFG S +V    Y           +  PEVL
Sbjct: 118 SK--QFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 173

Query: 286 LGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
           +   +    D+W+ G ++ E+++ G+  +      +    I + L +  
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 222

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 8e-35
 Identities = 54/239 (22%), Positives = 89/239 (37%), Gaps = 24/239 (10%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIK----NKKPFLNQAQIEVQLLE 161
                +   LG GSFG V +        +   VA+K +K    ++   ++    EV  + 
Sbjct: 7   EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66

Query: 162 KINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQL 221
            +       R +++L G       + +V EL            +     L    ++A Q+
Sbjct: 67  SL-----DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120

Query: 222 CCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR---- 277
              + +L S     IH DL   N+LL +     +KI DFG    + Q    Y+       
Sbjct: 121 AEGMGYLESK--RFIHRDLAARNLLLATRDL--VKIGDFGLMRALPQNDDHYVMQEHRKV 176

Query: 278 --YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
              + +PE L    +  A D W  G  L E+ T G+  + G N    + KI +     P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 1e-34
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 26/263 (9%)

Query: 101 IIKHGEKF-LDRYEIDTLLGKGSFGQVVKAFD---HEEKCQVAIKIIK-----NKKPFLN 151
           +  H EK  ++ +E+  +LG G++G+V        H+     A+K++K      K     
Sbjct: 14  LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 73

Query: 152 QAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLS-YNLYNLIRNTNFHGVS 210
             + E Q+LE I      S ++V L   F  +  L L+ + ++   L+  +        +
Sbjct: 74  HTRTERQVLEHIR----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ--RERFT 127

Query: 211 LNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV---- 266
            +  + +  ++  AL  L   +L II+ D+K ENILL S     + + DFG S       
Sbjct: 128 EHEVQIYVGEIVLALEHLH--KLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFVADE 183

Query: 267 GQTLYQYIQSRYYRSPEVLLGIP--YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTK 324
            +  Y +  +  Y +P+++ G    +D A+D WSLG ++ EL TG   F+   E +   +
Sbjct: 184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 243

Query: 325 IIEVLGMPPGYLLHGASKTSKYF 347
           I   +           S  +K  
Sbjct: 244 ISRRILKSEPPYPQEMSALAKDL 266

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 0.001
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 403 FKDLILRMLTYDPKKRISPTN-----VLRHEFF 430
            KDLI R+L  DPKKR+         +  H FF
Sbjct: 263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 3e-34
 Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 50/278 (17%)

Query: 92  GHDDENYDYI----IKHGEKF---LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVA 139
           G  D  Y Y+     ++  K+    +  E   +LG G+FG+V+ A  +         QVA
Sbjct: 12  GSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVA 71

Query: 140 IKIIKNKKPFLNQAQI--EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-N 196
           +K++K K     +  +  E++++ ++         IV L G  T    + L+FE   Y +
Sbjct: 72  VKMLKEKADSSEREALMSELKMMTQLG----SHENIVNLLGACTLSGPIYLIFEYCCYGD 127

Query: 197 LYNLIRN---------------------TNFHGVSLNLTKKFAQQLCCALAFLSSPELSI 235
           L N +R+                      + + ++      FA Q+   + FL     S 
Sbjct: 128 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--SC 185

Query: 236 IHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRSPEVLLGIPY 290
           +H DL   N+L+   K   +KI DFG +  +       ++        + +PE L    Y
Sbjct: 186 VHRDLAARNVLVTHGKV--VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY 243

Query: 291 DLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIE 327
            +  D+WS G +L E+ + G   + G        K+I+
Sbjct: 244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ 281

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 1e-33
 Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 15/239 (6%)

Query: 99  DYIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQ 158
           DY I+      +R E+   +G+G FG V +      +       IK  K   + +  E  
Sbjct: 1   DYEIQR-----ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 55

Query: 159 LLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFA 218
           L E +        +IVKL G  T +N + ++ EL +            + + L     +A
Sbjct: 56  LQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114

Query: 219 QQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQ--- 275
            QL  ALA+L S     +H D+   N+L+ S     +K+ DFG S ++  + Y       
Sbjct: 115 YQLSTALAYLESK--RFVHRDIAARNVLVSSNDC--VKLGDFGLSRYMEDSTYYKASKGK 170

Query: 276 -SRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
               + +PE +    +  A D+W  G  + E+   G   F G    D + +I     +P
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 229

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  125 bits (314), Expect = 2e-33
 Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 23/242 (9%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDH---EEKCQVAIKIIKNK--KPFLNQAQIEVQLL 160
           E  +   +I+ ++G G FG+V         + +  VAIK +K+   +        E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 161 EKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQ 220
            +          ++ L+G  T    + ++ E +     +     N    ++       + 
Sbjct: 82  GQ-----FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 136

Query: 221 LCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG--------SSCHVGQTLYQ 272
           +   + +L+    + +H DL   NIL+ S      K+ DFG        +S     +   
Sbjct: 137 IAAGMKYLADM--NYVHRDLAARNILVNSNLV--CKVSDFGLSRFLEDDTSDPTYTSALG 192

Query: 273 YIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGM 331
                 + +PE +    +  A D+WS G ++ E+ + GE  +      D +  I +   +
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 252

Query: 332 PP 333
           PP
Sbjct: 253 PP 254

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 2e-32
 Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 26/240 (10%)

Query: 108 FLDRYEI---DTLLGKGSFGQVVKAFDHEEKC--QVAIKIIKNKKP---FLNQAQIEVQL 159
           +LDR  +   D  LG G+FG V K +   +K    VA+KI+KN+       ++   E  +
Sbjct: 2   YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 61

Query: 160 LEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQ 219
           +++++     + YIV++ G         LV E+      N     N H V      +   
Sbjct: 62  MQQLD-----NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVH 114

Query: 220 QLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG------SSCHVGQTLYQY 273
           Q+   + +L     + +H DL   N+LL +      KI DFG      +  +  +     
Sbjct: 115 QVSMGMKYLEES--NFVHRDLAARNVLLVTQHY--AKISDFGLSKALRADENYYKAQTHG 170

Query: 274 IQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
                + +PE +    +    D+WS G ++ E  + G+  + G    +    + +   M 
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 2e-32
 Identities = 51/341 (14%), Positives = 104/341 (30%), Gaps = 77/341 (22%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIH 169
               +   +GKG FG+V +     E+  VA+KI  +++      + E+          + 
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRGEE--VAVKIFSSREERSWFREAEIYQT-----VMLR 55

Query: 170 SRYIVKLKGHFTWKN----HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
              I+         N     L LV +   + +L++ +     + V++    K A      
Sbjct: 56  HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASG 112

Query: 225 LAFL------SSPELSIIHCDLKPENILLCSPKRSAIKIIDFG-------SSCHVGQTLY 271
           LA L      +  + +I H DLK +NIL+         I D G       ++  +     
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVRHDSATDTIDIAPN 170

Query: 272 QYIQSRYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI 325
             + ++ Y +PEVL               D++++G +  E+     +  G +E  Q+   
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG-GIHEDYQLPYY 229

Query: 326 IEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGP 385
             V   P    +       K    + +                                 
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRW------------------------------- 258

Query: 386 GGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR 426
                     S         ++      +   R++   + +
Sbjct: 259 ---------QSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 3e-32
 Identities = 51/243 (20%), Positives = 91/243 (37%), Gaps = 22/243 (9%)

Query: 109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI 168
            +  +   ++G+G+FGQV+KA   ++  ++   I + K+        +     ++     
Sbjct: 9   WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFH--------------GVSLNL 213
           H   I+ L G    + +L L  E   + NL + +R +                  +S   
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 214 TKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS--CHVGQTLY 271
              FA  +   + +LS  +   IH DL   NIL+        KI DFG S    V     
Sbjct: 129 LLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYV--AKIADFGLSRGQEVYVKKT 184

Query: 272 QYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLG 330
                  + + E L    Y    D+WS G +L E+ + G   + G    +   K+ +   
Sbjct: 185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 244

Query: 331 MPP 333
           +  
Sbjct: 245 LEK 247

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  118 bits (297), Expect = 5e-31
 Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 45/254 (17%)

Query: 110 DRYEIDTLLGKGSFGQVVKA-----FDHEEKCQVAIKIIKNKKPFLNQAQI--EVQLLEK 162
           +  E    +G+G+FG+V +A       +E    VA+K++K +     QA    E  L+ +
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV------------ 209
            +     +  IVKL G       +CL+FE ++Y +L   +R+ + H V            
Sbjct: 73  FD-----NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 127

Query: 210 ----------SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID 259
                     S       A+Q+   +A+LS      +H DL   N L+       +KI D
Sbjct: 128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--KFVHRDLATRNCLVGE--NMVVKIAD 183

Query: 260 FGSSCHVGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLF 313
           FG S ++    Y            +  PE +    Y    D+W+ G +L E+ + G   +
Sbjct: 184 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243

Query: 314 SGKNEVDQMTKIIE 327
            G    + +  + +
Sbjct: 244 YGMAHEEVIYYVRD 257

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 9e-31
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 24/236 (10%)

Query: 110 DRYEI-DTLLGKGSFGQVVKAFDHE--EKCQVAIKIIK--NKKPFLNQAQIEVQLLEKIN 164
           D   I D  LG G+FG V +       ++  VAIK++K   +K    +   E Q++ ++ 
Sbjct: 8   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL- 66

Query: 165 KADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                + YIV+L G       L LV E+     L+  +       + ++   +   Q+  
Sbjct: 67  ----DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSM 120

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------ 277
            + +L     + +H DL   N+LL +  R   KI DFG S  +G     Y          
Sbjct: 121 GMKYLEEK--NFVHRDLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPL 176

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
            + +PE +    +    D+WS G  + E  + G+  +      + M  I +   M 
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME 232

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 9e-31
 Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 34/256 (13%)

Query: 106 EKFLDRYEIDTLLGKGSFGQVVKAFDH-------EEKCQVAIKIIKNK--KPFLNQAQIE 156
           E   DR  +   LG+G+FGQVV A              +VA+K++K+   +  L+    E
Sbjct: 9   ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68

Query: 157 VQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLT- 214
           +++++ I       + I+ L G  T    L ++ E  S  NL   ++     G+  +   
Sbjct: 69  MEMMKMIG----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 124

Query: 215 -------------KKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS---PKRSAIKII 258
                           A Q+   + +L+S     IH DL   N+L+      K +   + 
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLA 182

Query: 259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKN 317
                    +          + +PE L    Y    D+WS G +L E+ T G   + G  
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242

Query: 318 EVDQMTKIIEVLGMPP 333
             +    + E   M  
Sbjct: 243 VEELFKLLKEGHRMDK 258

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-30
 Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 12/230 (5%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKI-IKNKKPFLNQAQIEVQLLEKINKADI 168
             ++   +LG G+FG V K     E  +V I + IK  +   +    +  L E    A +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 169 HSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFL 228
            + ++ +L       + + L+ +L+ +         +   +       +  Q+   + +L
Sbjct: 69  DNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 229 SSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR-----YYRSPE 283
                 ++H DL   N+L+ +P+   +KI DFG +  +G    +Y          + + E
Sbjct: 128 EDR--RLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183

Query: 284 VLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
            +L   Y    D+WS G  + EL T G   + G    +  + + +   +P
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 233

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 2e-29
 Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 38/248 (15%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQI--EVQLLEK 162
           +R      LG G+FG+VV+A  +     +    VA+K++K       +  +  E+++L  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 163 INKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGV------------ 209
           +     +   IV L G  T      ++ E   Y +L N +R      +            
Sbjct: 83  LG----NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 210 ----SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH 265
                L     F+ Q+   +AFL+S   + IH DL   NILL   +    KI DFG +  
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARNILLTHGRI--TKICDFGLARD 194

Query: 266 VGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEV 319
           +       ++        + +PE +    Y    D+WS G  L EL + G   + G    
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254

Query: 320 DQMTKIIE 327
            +  K+I+
Sbjct: 255 SKFYKMIK 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 4e-29
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 23/237 (9%)

Query: 111 RYEIDTLLGKGSFGQVVKAFDHE---EKCQVAIKIIK--NKKPFLNQAQIEVQLLEKINK 165
               + ++G+G FG V      +   +K   A+K +        ++Q   E  +++  + 
Sbjct: 28  IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS- 86

Query: 166 ADIHSRYIVKLKGH-FTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCA 224
                  ++ L G     +    +V   + +           H  ++     F  Q+   
Sbjct: 87  ----HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142

Query: 225 LAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSR------- 277
           + FL+S     +H DL   N +L       +K+ DFG +  +    +  + ++       
Sbjct: 143 MKFLASK--KFVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGAKLPV 198

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP 333
            + + E L    +    D+WS G +L EL T G P +   N  D    +++   +  
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 255

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 5e-29
 Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 31/250 (12%)

Query: 100 YIIKHGEKFLDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKPFLNQAQ 154
           Y+    E   ++  +   LG+GSFG V +         E + +VAIK +        + +
Sbjct: 10  YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 69

Query: 155 I--EVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY-NLYNLIR--------N 203
              E  ++++ N       ++V+L G  +      ++ EL++  +L + +R        N
Sbjct: 70  FLNEASVMKEFN-----CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

Query: 204 TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS 263
                 SL+   + A ++   +A+L++ +   +H DL   N ++       +KI DFG +
Sbjct: 125 PVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFT--VKIGDFGMT 180

Query: 264 CHVGQTLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKN 317
             + +T Y     +      + SPE L    +    D+WS G +L E+ T  E  + G +
Sbjct: 181 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 240

Query: 318 EVDQMTKIIE 327
               +  ++E
Sbjct: 241 NEQVLRFVME 250

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 45/236 (19%), Positives = 90/236 (38%), Gaps = 22/236 (9%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDH----EEKCQVAIKIIKNKKPFLNQAQI--EVQLLEKI 163
                  ++G G FG+V K        +++  VAIK +K       +     E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 164 NKADIHSRYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCC 223
                    I++L+G  +    + ++ E +     +          S+       + +  
Sbjct: 67  -----SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 224 ALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ------TLYQYIQSR 277
            + +L++   + +H DL   NIL+ S      K+ DFG S  +        T        
Sbjct: 122 GMKYLANM--NYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 177

Query: 278 YYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMP 332
            + +PE +    +  A D+WS G ++ E+ T GE  +   +  + M  I +   +P
Sbjct: 178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP 233

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 1e-25
 Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 33/245 (13%)

Query: 110 DRYEIDTLLGKGSFGQVVKAFDHEEKC-----QVAIKIIKNKKPFLNQAQIEVQLLEKIN 164
           DR ++   LG+G+FGQV++A             VA+K++  K+   +     +    KI 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 70

Query: 165 KADIHSRYIVKLKGHFTWK-NHLCLVFELLS-YNLYNLIRNTNFHGV------------- 209
               H   +V L G  T     L ++ E     NL   +R+     V             
Sbjct: 71  IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 210 -SLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ 268
            +L     ++ Q+   + FL+S +   IH DL   NILL    ++ +KI DFG +  + +
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSE--KNVVKICDFGLARDIYK 186

Query: 269 TLYQYIQSR-----YYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQM 322
                 +        + +PE +    Y +  D+WS G +L E+ +     + G    ++ 
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246

Query: 323 TKIIE 327
            + ++
Sbjct: 247 CRRLK 251

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 78.7 bits (193), Expect = 1e-17
 Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 16/200 (8%)

Query: 112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHS- 170
             I  L+G+G    V   +  +   +  +K  K       + + +    +          
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFG-ECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 171 -----RYIVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCAL 225
                R + KL+G    K +      +    L  LI     + V +    +    +   +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAV----LMELIDAKELYRVRVENPDEVLDMILEEV 116

Query: 226 AFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVL 285
           A        I+H DL   N+L+       I IIDF  S  VG+  ++ I  R  R+    
Sbjct: 117 AKFYHRG--IVHGDLSQYNVLVSEEG---IWIIDFPQSVEVGEEGWREILERDVRNIITY 171

Query: 286 LGIPYDLAIDMWSLGCILVE 305
               Y    D+ S    +++
Sbjct: 172 FSRTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	437
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.34
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.02
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.74
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.46
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.09
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.99

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-59  Score=439.26  Aligned_cols=252  Identities=29%  Similarity=0.451  Sum_probs=215.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|+++.+++.||+|++...    ......+.+|+.++..+     .|||||++++++.+++
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDAT   79 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEEECC
Confidence            46899999999999999999999999999999998632    22345567788888776     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+|||||++ +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~--~ivHrDiKp~Nill--~~~~~~kl~DFG~a  153 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS  153 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTSCEEECCCCSC
T ss_pred             EEEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC--Ceeeeeecccccee--cCCCCEeeccccee
Confidence            99999999965 8999887654  589999999999999999999964  89999999999999  67888999999999


Q ss_pred             eecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        264 CHVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       264 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..... .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+.......|..       
T Consensus       154 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~-------  226 (263)
T d2j4za1         154 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------  226 (263)
T ss_dssp             SCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTT-------
T ss_pred             eecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCcc-------
Confidence            77643 3456789999999999999999999999999999999999999999998888777765421111100       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                              ....+.+||.+||+.||.+|||++
T Consensus       227 --------------------------------------------------------~s~~~~~li~~~L~~dp~~R~t~~  250 (263)
T d2j4za1         227 --------------------------------------------------------VTEGARDLISRLLKHNPSQRPMLR  250 (263)
T ss_dssp             --------------------------------------------------------SCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             --------------------------------------------------------CCHHHHHHHHHHccCCHhHCcCHH
Confidence                                                                    012578999999999999999999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      |+|+||||+..+
T Consensus       251 eil~hp~~~~~s  262 (263)
T d2j4za1         251 EVLEHPWITANS  262 (263)
T ss_dssp             HHHTCHHHHHHC
T ss_pred             HHHcCcCcCCcC
Confidence            999999998644

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.2e-57  Score=446.58  Aligned_cols=261  Identities=25%  Similarity=0.437  Sum_probs=222.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++..... ....+.+|+.++..+     .|||||+++++|.+.+++
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~   98 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEM   98 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEEETTEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEE
Confidence            46799999999999999999999999999999999975432 234566788888877     689999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |||||||+| +|.+++.... ..+++..++.++.||+.||+|||++  |||||||||+|||++.+.++.+||+|||+|+.
T Consensus        99 ~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~--~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~  175 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  175 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc--CCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence            999999965 8999886543 4599999999999999999999964  89999999999999766678999999999987


Q ss_pred             cCCc--cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQT--LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ....  ..+..||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..|......++......    
T Consensus       176 ~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~----  251 (350)
T d1koaa2         176 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG----  251 (350)
T ss_dssp             CCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGG----
T ss_pred             cccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccC----
Confidence            6533  3457899999999999999999999999999999999999999999999888888866433222111100    


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                             ....+++||.+||++||.+|||++|
T Consensus       252 -------------------------------------------------------~s~~~~~li~~~L~~dP~~R~t~~e  276 (350)
T d1koaa2         252 -------------------------------------------------------ISEDGKDFIRKLLLADPNTRMTIHQ  276 (350)
T ss_dssp             -------------------------------------------------------CCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHccCChhHCcCHHH
Confidence                                                                   0015799999999999999999999


Q ss_pred             HhcCCCcCcCCC
Q psy11727        424 VLRHEFFLKHSV  435 (437)
Q Consensus       424 ~l~Hp~~~~~~~  435 (437)
                      +|+||||++...
T Consensus       277 il~hp~~~~~~~  288 (350)
T d1koaa2         277 ALEHPWLTPGNA  288 (350)
T ss_dssp             HHHSTTTSCTTC
T ss_pred             HhcCcccCCCCC
Confidence            999999987653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.9e-58  Score=441.77  Aligned_cols=262  Identities=30%  Similarity=0.402  Sum_probs=205.4

Q ss_pred             cCceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        104 HGEKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       104 ~~~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..+.+.++|++.+.||+|+||+||+|+++.+++.||||++....  .....+.+|+.++..+     .|||||+++++|.
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~   77 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYE   77 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTC-----CCTTBCCEEEEEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEE
Confidence            34556788999999999999999999999999999999997443  2224456788888776     7899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEe
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIID  259 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~D  259 (437)
                      +++.+|||||||+ |+|.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+.. ++++.+||+|
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~--~iiHrDiKp~Nil~~~~~~~~~vkl~D  153 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISD  153 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred             ECCEEEEEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhc--eeeeEEecccceeecccCCCceEEEec
Confidence            9999999999996 5899999765  4599999999999999999999964  8999999999999964 3568899999


Q ss_pred             CCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        260 FGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       260 FG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ||+|.....  ...+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+....+......++....
T Consensus       154 FG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  233 (307)
T d1a06a_         154 FGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW  233 (307)
T ss_dssp             C------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTT
T ss_pred             cceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccc
Confidence            999976643  334678999999999999999999999999999999999999999999888887777553221111000


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      +                                                           .....+.+||.+||+.||.+
T Consensus       234 ~-----------------------------------------------------------~~s~~~~~li~~~L~~dP~~  254 (307)
T d1a06a_         234 D-----------------------------------------------------------DISDSAKDFIRHLMEKDPEK  254 (307)
T ss_dssp             T-----------------------------------------------------------TSCHHHHHHHHHHSCSSGGG
T ss_pred             c-----------------------------------------------------------CCCHHHHHHHHHHccCCHhH
Confidence            0                                                           00125799999999999999


Q ss_pred             CCCHHHHhcCCCcCcC
Q psy11727        418 RISPTNVLRHEFFLKH  433 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~  433 (437)
                      |||++|+|+||||++.
T Consensus       255 R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         255 RFTCEQALQHPWIAGD  270 (307)
T ss_dssp             SCCHHHHHHSTTTTSS
T ss_pred             CcCHHHHhcCHhhCCC
Confidence            9999999999999863

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-58  Score=435.10  Aligned_cols=256  Identities=24%  Similarity=0.360  Sum_probs=207.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++....  .....+.+|+.+++.+     .|||||++++++.+++.
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~~~~~~~~~~~   77 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNI   77 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTC-----CCTTBCCEEEEEEETTE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-----CCCCEeeEeeeeccCce
Confidence            4678999999999999999999999999999999997442  2234577888888776     78999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +|||||||+| +|.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||+  ++++.+||+|||+|+
T Consensus        78 ~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~--~IiHrDiKp~NILl--~~~~~~KL~DFG~a~  151 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI--GITHRDIKPENLLL--DERDNLKISDFGLAT  151 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--CTTCCEEECCCTTCE
T ss_pred             eEEEEeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc--CCccCcccHHHEEE--CCCCCEEEccchhhe
Confidence            9999999965 899888654  4699999999999999999999964  89999999999999  677889999999998


Q ss_pred             ecCC-----ccccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        265 HVGQ-----TLYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       265 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ....     ...+.+||+.|+|||++.+..+ +.++|||||||++|||++|++||.+.+...............+.    
T Consensus       152 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~----  227 (271)
T d1nvra_         152 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----  227 (271)
T ss_dssp             ECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTST----
T ss_pred             eeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC----
Confidence            6532     2345689999999999998876 57899999999999999999999876544333222221110000    


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                             .+                                                 ......+.+||.+||+.||.+|
T Consensus       228 -------~~-------------------------------------------------~~~s~~~~~li~~~L~~dP~~R  251 (271)
T d1nvra_         228 -------PW-------------------------------------------------KKIDSAPLALLHKILVENPSAR  251 (271)
T ss_dssp             -------TG-------------------------------------------------GGSCHHHHHHHHHHSCSSTTTS
T ss_pred             -------cc-------------------------------------------------ccCCHHHHHHHHHHcCCChhHC
Confidence                   00                                                 0001257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCC
Q psy11727        419 ISPTNVLRHEFFLKHS  434 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~  434 (437)
                      ||++|+|+||||++.-
T Consensus       252 ~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         252 ITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             CCHHHHTTCTTTTCCC
T ss_pred             cCHHHHhcCHhhCcCC
Confidence            9999999999998754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-57  Score=434.25  Aligned_cols=252  Identities=25%  Similarity=0.384  Sum_probs=214.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++.+.||+|+||+||+|++..+|+.||||++.... ...+.+.+|+.+++.+     .|||||+++++|.+.+++|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~   93 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhC-----CCCCEeeEeEEEEECCEEE
Confidence            357999999999999999999999999999999987433 2335677899988877     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||||||+| +|.+++...   .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|+..
T Consensus        94 ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~--~iiHrDiKp~NILl--~~~~~vkl~DFG~a~~~  166 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN--QVIHRDIKSDNILL--GMDGSVKLTDFGFCAQI  166 (293)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTCCEEECCCTTCEEC
T ss_pred             EEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCcHHHeEE--CCCCcEeeccchhheee
Confidence            99999965 788877653   489999999999999999999964  89999999999999  67789999999999876


Q ss_pred             CC---ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        267 GQ---TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       267 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   .....+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+......+...        
T Consensus       167 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--------  238 (293)
T d1yhwa1         167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN--------  238 (293)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSS--------
T ss_pred             ccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCC--------
Confidence            32   3345689999999999999999999999999999999999999999998887777765532111100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                         ..                                                 .-...+++||.+||+.||.+|||++|
T Consensus       239 ---~~-------------------------------------------------~~s~~~~~li~~~L~~dP~~R~s~~e  266 (293)
T d1yhwa1         239 ---PE-------------------------------------------------KLSAIFRDFLNRCLDMDVEKRGSAKE  266 (293)
T ss_dssp             ---GG-------------------------------------------------GSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             ---cc-------------------------------------------------cCCHHHHHHHHHHccCChhHCcCHHH
Confidence               00                                                 00125799999999999999999999


Q ss_pred             HhcCCCcCc
Q psy11727        424 VLRHEFFLK  432 (437)
Q Consensus       424 ~l~Hp~~~~  432 (437)
                      +|+||||+.
T Consensus       267 il~Hp~~~~  275 (293)
T d1yhwa1         267 LLQHQFLKI  275 (293)
T ss_dssp             HTTCGGGGG
T ss_pred             HhcCHhhCC
Confidence            999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-57  Score=435.49  Aligned_cols=254  Identities=29%  Similarity=0.453  Sum_probs=215.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|+++.+++.||||++...    ......+.+|+.+++.+     .|||||+++++|.+++
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~   81 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDE   81 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CSTTBCCEEEEEECSS
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-----CCCCeeEEEEEEEECC
Confidence            46899999999999999999999999999999999632    22345677899998887     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+||||++| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  ++++.+||+|||+|
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~--~iiHrDiKp~NIll--~~~~~vkl~DFG~a  155 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK--GIIHRDLKPENILL--NEDMHIQITDFGTA  155 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTSCEEECCCTTC
T ss_pred             EEEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccc--cEEcCcCCcccccc--CCCceEEecccccc
Confidence            99999999975 8989887653  599999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCC-----ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        264 CHVGQ-----TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       264 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      +....     ...+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+.+|.......|.    
T Consensus       156 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----  231 (288)
T d1uu3a_         156 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----  231 (288)
T ss_dssp             EECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT----
T ss_pred             eecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc----
Confidence            87642     223568999999999999999999999999999999999999999999988888777542111100    


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                                                                                 .....+++||.+||+.||.+|
T Consensus       232 -----------------------------------------------------------~~s~~~~~li~~~L~~dP~~R  252 (288)
T d1uu3a_         232 -----------------------------------------------------------KFFPKARDLVEKLLVLDATKR  252 (288)
T ss_dssp             -----------------------------------------------------------TCCHHHHHHHHTTSCSSGGGS
T ss_pred             -----------------------------------------------------------cCCHHHHHHHHHHccCCHhHC
Confidence                                                                       001257899999999999999


Q ss_pred             CCHHH------HhcCCCcCcCCCC
Q psy11727        419 ISPTN------VLRHEFFLKHSVD  436 (437)
Q Consensus       419 ~t~~e------~l~Hp~~~~~~~~  436 (437)
                      ||++|      +++||||+..+++
T Consensus       253 ~t~~e~~~~~~i~~Hpff~~i~w~  276 (288)
T d1uu3a_         253 LGCEEMEGYGPLKAHPFFESVTWE  276 (288)
T ss_dssp             TTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred             cCHHHHcCCHHHHcCCccCCCCHH
Confidence            99998      5889999998765

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-58  Score=446.90  Aligned_cols=297  Identities=24%  Similarity=0.325  Sum_probs=209.8

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ..++|++.+.||+|+||+||+|++..+|+.||+|+++...  ....++.+|+.+++.+     .|||||+++++|.+.++
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-----CCTTBCCEEEEEECSSE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCE
Confidence            3578999999999999999999999999999999997432  2234566777777665     79999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +||||||+.| +|.+++.+..  .+++..++.++.||+.||.|||++ .|||||||||+|||+  +.++.+||+|||+|.
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~-~~IiHRDiKP~NILl--~~~~~vkl~DFGla~  153 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILV--NSRGEIKLCDFGVSG  153 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHH-HCCCCSCCSGGGEEE--CTTCCEEECCCCCCH
T ss_pred             EEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHh-CCEEccccCHHHeeE--CCCCCEEEeeCCCcc
Confidence            9999999976 8999887653  589999999999999999999963 379999999999999  678899999999998


Q ss_pred             ecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhhccCCc
Q psy11727        265 HVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ-MTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       265 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .... ...+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+. ...+....+.+..........
T Consensus       154 ~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (322)
T d1s9ja_         154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP  233 (322)
T ss_dssp             HHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------
T ss_pred             ccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccc
Confidence            6533 33467999999999999999999999999999999999999999988665432 222222222222111000000


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      .....              .......+.......+-......|...      .+......++|||.+||++||.+|||++
T Consensus       234 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~~dli~~~L~~dP~~R~ta~  293 (322)
T d1s9ja_         234 GRPLS--------------SYGMDSRPPMAIFELLDYIVNEPPPKL------PSGVFSLEFQDFVNKCLIKNPAERADLK  293 (322)
T ss_dssp             --------------------------CCCCHHHHHHHHHTSCCCCC------CBTTBCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ccccc--------------ccccccccchhHHHHHhhhhccCCccC------ccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            00000              000000000000000000000011100      0001123689999999999999999999


Q ss_pred             HHhcCCCcCcCC
Q psy11727        423 NVLRHEFFLKHS  434 (437)
Q Consensus       423 e~l~Hp~~~~~~  434 (437)
                      |+|+||||++..
T Consensus       294 e~L~Hpf~~~~~  305 (322)
T d1s9ja_         294 QLMVHAFIKRSD  305 (322)
T ss_dssp             HHHTSHHHHHHH
T ss_pred             HHhhCHhhCcCC
Confidence            999999998744

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.7e-57  Score=443.41  Aligned_cols=258  Identities=25%  Similarity=0.426  Sum_probs=218.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .++|++.+.||+|+||+||+|++..+|+.||||++...... ...+.+|+.++..+     .|||||+++++|.+++++|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            57899999999999999999999999999999999754322 23455677777665     7899999999999999999


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ||||||+| +|.+.+.... ..+++..++.|+.||+.||+|||+  .|||||||||+|||+.....+.+||+|||+|...
T Consensus       103 ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~--~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         103 LILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE--HSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  179 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccccccccccccCCCeEEEeecccceec
Confidence            99999965 8888776543 469999999999999999999995  4899999999999996557789999999999877


Q ss_pred             CC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccc
Q psy11727        267 GQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTS  344 (437)
Q Consensus       267 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  344 (437)
                      ..  ......||+.|+|||++.+..|+.++|||||||++|+|+||++||.+.+..+.+..+......++......     
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-----  254 (352)
T d1koba_         180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS-----  254 (352)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTT-----
T ss_pred             CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccC-----
Confidence            53  34457899999999999999999999999999999999999999999999888888866433222111100     


Q ss_pred             hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHH
Q psy11727        345 KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNV  424 (437)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~  424 (437)
                                                                            ....+.+||.+||+.||.+|||++|+
T Consensus       255 ------------------------------------------------------~s~~~~~li~~~L~~dp~~R~s~~ei  280 (352)
T d1koba_         255 ------------------------------------------------------VSPEAKDFIKNLLQKEPRKRLTVHDA  280 (352)
T ss_dssp             ------------------------------------------------------SCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             ------------------------------------------------------CCHHHHHHHHHHccCChhHCcCHHHH
Confidence                                                                  01257999999999999999999999


Q ss_pred             hcCCCcCcC
Q psy11727        425 LRHEFFLKH  433 (437)
Q Consensus       425 l~Hp~~~~~  433 (437)
                      |+||||++.
T Consensus       281 l~Hp~~~~~  289 (352)
T d1koba_         281 LEHPWLKGD  289 (352)
T ss_dssp             HTSTTTSSC
T ss_pred             hcCHhhCCC
Confidence            999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-57  Score=438.95  Aligned_cols=260  Identities=26%  Similarity=0.417  Sum_probs=225.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|++.+.||+|+||+||+|.++.+++.||||+++........+.+|+.++..+     .|||||+++++|++.+++
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEE
Confidence            457899999999999999999999999999999999986655445677899888876     789999999999999999


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      |||||||+| +|.+++.... ..+++..++.|+.||+.||+|||+  .||+||||||+|||++.++...+||+|||++..
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~--~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~  153 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS--HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH--cCCCcccccccceeecCCCceEEEEcccchhhc
Confidence            999999965 8999887654 358999999999999999999995  489999999999999766677899999999987


Q ss_pred             cCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        266 VGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       266 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ...  ......+|+.|+|||.+.+..|+.++|||||||++|+|++|.+||.+.+..+.+.+|......++...++..+  
T Consensus       154 ~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s--  231 (321)
T d1tkia_         154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS--  231 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSC--
T ss_pred             cccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCC--
Confidence            643  3456788999999999999999999999999999999999999999999999988887754433333221110  


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                               ..+++||.+||+.||.+|||++|
T Consensus       232 ---------------------------------------------------------~~~~~li~~~L~~dp~~R~s~~e  254 (321)
T d1tkia_         232 ---------------------------------------------------------IEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             ---------------------------------------------------------HHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ---------------------------------------------------------HHHHHHHHHHccCChhHCcCHHH
Confidence                                                                     15789999999999999999999


Q ss_pred             HhcCCCcCcC
Q psy11727        424 VLRHEFFLKH  433 (437)
Q Consensus       424 ~l~Hp~~~~~  433 (437)
                      +|+||||++.
T Consensus       255 il~hp~~~~~  264 (321)
T d1tkia_         255 ALQHPWLKQK  264 (321)
T ss_dssp             HHHSHHHHSC
T ss_pred             HhcCHhhccC
Confidence            9999999753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-57  Score=429.43  Aligned_cols=254  Identities=30%  Similarity=0.450  Sum_probs=213.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC-cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK-KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      +.|++.+.||+|+||+||+|++..+++.||||++... ......+.+|+.++..+     .|||||+++++|.+.+.++|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCeEEE
Confidence            5699999999999999999999999999999999754 33456788899999887     68999999999999999999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||||++ +|.+++.... ..+++..++.++.||+.||.|||++  |||||||||+|||+  +.++.+||+|||+|....
T Consensus        87 vmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~--~ivHrDiKp~NIll--~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN--KIIHRDLKAGNILF--TLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             EEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCCTTCEECH
T ss_pred             EEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC--CEEEeecChhheeE--CCCCCEEEEechhhhccC
Confidence            9999966 7888776543 4699999999999999999999964  89999999999999  678899999999997654


Q ss_pred             Cc---cccccccccccChhhhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLL-----GIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ..   ..+.+||+.|+|||++.     +..|+.++|||||||++|||+||++||.+.+..+.+.++....  ++...   
T Consensus       162 ~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~--~~~~~---  236 (288)
T d2jfla1         162 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLA---  236 (288)
T ss_dssp             HHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC--CCCCS---
T ss_pred             CCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCC---
Confidence            32   34578999999999984     4568999999999999999999999999988887777765421  11000   


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                            ..                                                 ......+.+||.+||+.||.+||
T Consensus       237 ------~~-------------------------------------------------~~~s~~~~~li~~~L~~dp~~R~  261 (288)
T d2jfla1         237 ------QP-------------------------------------------------SRWSSNFKDFLKKCLEKNVDARW  261 (288)
T ss_dssp             ------SG-------------------------------------------------GGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             ------cc-------------------------------------------------ccCCHHHHHHHHHHccCChhHCc
Confidence                  00                                                 00012579999999999999999


Q ss_pred             CHHHHhcCCCcCcC
Q psy11727        420 SPTNVLRHEFFLKH  433 (437)
Q Consensus       420 t~~e~l~Hp~~~~~  433 (437)
                      |++|+|+||||+..
T Consensus       262 t~~ell~hp~~~~~  275 (288)
T d2jfla1         262 TTSQLLQHPFVTVD  275 (288)
T ss_dssp             CHHHHTTSGGGCCC
T ss_pred             CHHHHhcCcccCCC
Confidence            99999999999853

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-57  Score=432.36  Aligned_cols=283  Identities=33%  Similarity=0.549  Sum_probs=228.0

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...   ....++.+|+.+++.+     .|||||+++++|.+++++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~Hp~Iv~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEEeccccccccce
Confidence            68999999999999999999999999999999996432   2345677888888766     799999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      |+||||+++++.+++......++++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||.|...
T Consensus        77 ~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~--~IiHrDiKpeNIl~--~~~~~~kl~DFG~a~~~  152 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--RVLHRDLKPQNLLI--NTEGAIKLADFGLARAF  152 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTSCEEECSTTHHHHH
T ss_pred             eEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC--CEEccccCchheee--cccCcceeccCCcceec
Confidence            999999999988888776667899999999999999999999964  89999999999999  67889999999999766


Q ss_pred             CCc---cccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....||+.|+|||++.... ++.++|+|||||++|+|++|++||.+.+..+++.++....+.|....+.....
T Consensus       153 ~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (298)
T d1gz8a_         153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS  232 (298)
T ss_dssp             CCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             cCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccc
Confidence            432   33458999999999988766 47899999999999999999999999999999999999888887655543322


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+....+.                .........                  .......++|||++||++||.+|||++
T Consensus       233 ~~~~~~~~~~----------------~~~~~~~~~------------------~~~~s~~~~dll~~mL~~dP~~R~t~~  278 (298)
T d1gz8a_         233 MPDYKPSFPK----------------WARQDFSKV------------------VPPLDEDGRSLLSQMLHYDPNKRISAK  278 (298)
T ss_dssp             STTCCTTSCC----------------CCCCCHHHH------------------STTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             cccccccccc----------------ccccchhhh------------------ccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            1111100000                000000000                  001113679999999999999999999


Q ss_pred             HHhcCCCcCcCCC
Q psy11727        423 NVLRHEFFLKHSV  435 (437)
Q Consensus       423 e~l~Hp~~~~~~~  435 (437)
                      |+|+||||++..+
T Consensus       279 ell~H~ff~~~~~  291 (298)
T d1gz8a_         279 AALAHPFFQDVTK  291 (298)
T ss_dssp             HHHTSGGGTTCCC
T ss_pred             HHhCCHhhccCCC
Confidence            9999999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-56  Score=427.62  Aligned_cols=259  Identities=27%  Similarity=0.442  Sum_probs=217.9

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-------ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++....       .....+.+|+.+++.+     .|||||+++++|
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~   82 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHEVY   82 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            4678999999999999999999999999999999996432       1235678899999887     689999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCC--CCCEEE
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPK--RSAIKI  257 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~--~~~ikL  257 (437)
                      .+.+++|||||||+| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||++.++  ...+||
T Consensus        83 ~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~--~ivHrDiKp~Nill~~~~~~~~~vkl  158 (293)
T d1jksa_          83 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL--QIAHFDLKPENIMLLDRNVPKPRIKI  158 (293)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEESCSSSSSCCEEE
T ss_pred             EECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhc--ceeecccccceEEEecCCCcccceEe
Confidence            999999999999965 8999987753  599999999999999999999964  899999999999995332  235999


Q ss_pred             EeCCCceecC--CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Q psy11727        258 IDFGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGY  335 (437)
Q Consensus       258 ~DFG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~  335 (437)
                      +|||+|....  ....+..||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+......++..
T Consensus       159 ~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  238 (293)
T d1jksa_         159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE  238 (293)
T ss_dssp             CCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHH
T ss_pred             cchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCch
Confidence            9999998764  33456789999999999999999999999999999999999999999999988888776543222222


Q ss_pred             hhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        336 LLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ..+..                                                           ...+++||++||+.||
T Consensus       239 ~~~~~-----------------------------------------------------------s~~~~~li~~~L~~dP  259 (293)
T d1jksa_         239 YFSNT-----------------------------------------------------------SALAKDFIRRLLVKDP  259 (293)
T ss_dssp             HHTTS-----------------------------------------------------------CHHHHHHHHTTSCSSG
T ss_pred             hcCCC-----------------------------------------------------------CHHHHHHHHHHccCCh
Confidence            11100                                                           0157899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||++|+|+||||++..
T Consensus       260 ~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         260 KKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             GGSCCHHHHHHSTTTCC--
T ss_pred             hHCcCHHHHhcCcccCCCC
Confidence            9999999999999998754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.1e-57  Score=434.61  Aligned_cols=253  Identities=30%  Similarity=0.482  Sum_probs=218.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.+.||+|+||+||+|+++.+|+.||||+++..    ......+.+|+.+++.+     .|||||++++++.+.+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~   77 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDAQ   77 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECSS
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-----cCcChhheeeeEeeCC
Confidence            46799999999999999999999999999999999632    22335566788887766     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+|||||.| +|..++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~--~iiHrDiKp~NILl--~~~g~vkL~DFG~a  151 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK--DIIYRDLKPENILL--DKNGHIKITDFGFA  151 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEE--CTTSCEEECCCSSC
T ss_pred             eeeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC--cEEccccCchheeE--cCCCCEEEecCccc
Confidence            99999999966 6777766553  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      +.......+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+.++.......|..        
T Consensus       152 ~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~--------  223 (316)
T d1fota_         152 KYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--------  223 (316)
T ss_dssp             EECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTT--------
T ss_pred             eEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCC--------
Confidence            998888888999999999999999999999999999999999999999999999988888876532111100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                                                                             ....+.+||.+||+.||.+|+    
T Consensus       224 -------------------------------------------------------~s~~~~~li~~~L~~dp~~R~~~~r  248 (316)
T d1fota_         224 -------------------------------------------------------FNEDVKDLLSRLITRDLSQRLGNLQ  248 (316)
T ss_dssp             -------------------------------------------------------SCHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHhhhCHHhccccch
Confidence                                                                   001578999999999999996    


Q ss_pred             -CHHHHhcCCCcCcCCC
Q psy11727        420 -SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~~  435 (437)
                       |++++++||||++..+
T Consensus       249 ~t~~~il~Hp~f~~i~~  265 (316)
T d1fota_         249 NGTEDVKNHPWFKEVVW  265 (316)
T ss_dssp             TTTHHHHTSGGGSSCCH
T ss_pred             hhHHHHHcCcccccCCH
Confidence             9999999999998754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-56  Score=437.53  Aligned_cols=253  Identities=26%  Similarity=0.428  Sum_probs=216.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++.    ......+.+|+.+++.+     .|||||+++++|++.+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSS
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEeeecccc
Confidence            56899999999999999999999999999999999743    22345567788887765     7899999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      ++|+|||||+| +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.+|.+||+|||+|
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~--~iiHRDlKP~NILl--~~~g~vkl~DFG~a  152 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR--DVVYRDIKLENLML--DKDGHIKITDFGLC  152 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTC
T ss_pred             ccccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc--CccccccCHHHeEe--cCCCCEEEeecccc
Confidence            99999999965 7888887764  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccC
Q psy11727        264 CHVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGA  340 (437)
Q Consensus       264 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  340 (437)
                      +...   ....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+....-..|..     
T Consensus       153 ~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~-----  227 (337)
T d1o6la_         153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT-----  227 (337)
T ss_dssp             BCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT-----
T ss_pred             cccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCcc-----
Confidence            7653   33456789999999999999999999999999999999999999999999888877775532111100     


Q ss_pred             CccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC
Q psy11727        341 SKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS  420 (437)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t  420 (437)
                                                                                ....+++||.+||+.||.+|++
T Consensus       228 ----------------------------------------------------------~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         228 ----------------------------------------------------------LSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             ----------------------------------------------------------SCHHHHHHHHHHTCSSTTTSTT
T ss_pred             ----------------------------------------------------------CCHHHHHHHHhhccCCchhhcc
Confidence                                                                      0015789999999999999994


Q ss_pred             -----HHHHhcCCCcCcCCC
Q psy11727        421 -----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 -----~~e~l~Hp~~~~~~~  435 (437)
                           ++|+++||||++..+
T Consensus       250 ~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         250 GGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             CSTTTHHHHHTSGGGTTCCH
T ss_pred             cccccHHHHHcCcccccCCH
Confidence                 999999999987643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-56  Score=426.02  Aligned_cols=284  Identities=31%  Similarity=0.489  Sum_probs=228.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC-CeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE-KCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~-~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--  182 (437)
                      .++|++++.||+|+||+||+|++..+ ++.||||+++..   ........+|+.+++.+..  ..||||++++++|..  
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~--~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH--TCCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh--cCCCCcceeeeeecccc
Confidence            47899999999999999999999765 678999998632   2234467788888888764  379999999999863  


Q ss_pred             ---CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        183 ---KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       183 ---~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                         ..+++++||++++++..+........+++..++.++.||+.||+|||++  |||||||||+|||+  ++.+.+||+|
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~--~ivHrDiKp~NILi--~~~~~~kl~d  159 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH--RVVHRDLKPQNILV--TSSGQIKLAD  159 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTCCEEECS
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC--CEEecCCCccEEEE--cCCCCeeecc
Confidence               3579999999999877777666667799999999999999999999964  89999999999999  7788999999


Q ss_pred             CCCceecC--CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        260 FGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       260 FG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ||++....  .......||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++.++.+..+.|+...+
T Consensus       160 fg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  239 (305)
T d1blxa_         160 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  239 (305)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             hhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence            99987653  3334678999999999999999999999999999999999999999999999999999999998887665


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                      +............       ..       .    ......                  .......+.|||++||++||.+
T Consensus       240 ~~~~~~~~~~~~~-------~~-------~----~~~~~~------------------~~~~s~~~~dli~~mL~~dP~~  283 (305)
T d1blxa_         240 PRDVALPRQAFHS-------KS-------A----QPIEKF------------------VTDIDELGKDLLLKCLTFNPAK  283 (305)
T ss_dssp             CTTCSSCGGGSCC-------CC-------C----CCGGGT------------------CCSCCHHHHHHHHHHSCSSTTT
T ss_pred             cccccchhhhhcc-------cc-------c----cchhhc------------------cccCCHHHHHHHHHHCcCChhH
Confidence            4333221110000       00       0    000000                  0011125789999999999999


Q ss_pred             CCCHHHHhcCCCcCcCC
Q psy11727        418 RISPTNVLRHEFFLKHS  434 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~~  434 (437)
                      |||++|||+||||++..
T Consensus       284 R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         284 RISAYSALSHPYFQDLE  300 (305)
T ss_dssp             SCCHHHHHTSGGGTTCC
T ss_pred             CcCHHHHhcChhhcCch
Confidence            99999999999999763

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-56  Score=421.61  Aligned_cols=252  Identities=24%  Similarity=0.394  Sum_probs=201.5

Q ss_pred             cCe-eeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        110 DRY-EIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       110 ~~y-~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      ++| ++.+.||+|+||+||+|.+..+++.||+|++.....   ....+.+|+.++..+     .|||||+++++|.+   
T Consensus         8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~   82 (270)
T d1t4ha_           8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVK   82 (270)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEESS
T ss_pred             CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEeeccc
Confidence            345 677889999999999999999999999999875432   223456677776655     79999999999876   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeC
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDF  260 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DF  260 (437)
                       ...+|+||||+++ +|.+++....  .+++..++.++.||+.||+|||+++.+||||||||+|||++ ++++.+||+||
T Consensus        83 ~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~-~~~~~~Kl~DF  159 (270)
T d1t4ha_          83 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-GPTGSVKIGDL  159 (270)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES-STTSCEEECCT
T ss_pred             cCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee-CCCCCEEEeec
Confidence             4578999999965 8999887653  58999999999999999999997644599999999999994 34678999999


Q ss_pred             CCceecCC-ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhhc
Q psy11727        261 GSSCHVGQ-TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQ-MTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       261 G~s~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~p~~~~~~  338 (437)
                      |+|+.... ...+.+||+.|+|||++.+ .|+.++|||||||++|||++|++||.+...... ...+..  +.+|..+..
T Consensus       160 Gla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~--~~~~~~~~~  236 (270)
T d1t4ha_         160 GLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS--GVKPASFDK  236 (270)
T ss_dssp             TGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT--TCCCGGGGG
T ss_pred             CcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc--CCCCcccCc
Confidence            99976543 3456789999999999876 699999999999999999999999987654443 333322  111111000


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                      .                                                           ....+.+||.+||+.||++|
T Consensus       237 ~-----------------------------------------------------------~~~~~~~li~~~l~~dp~~R  257 (270)
T d1t4ha_         237 V-----------------------------------------------------------AIPEVKEIIEGCIRQNKDER  257 (270)
T ss_dssp             C-----------------------------------------------------------CCHHHHHHHHHHSCSSGGGS
T ss_pred             c-----------------------------------------------------------CCHHHHHHHHHHccCCHhHC
Confidence            0                                                           00157899999999999999


Q ss_pred             CCHHHHhcCCCcC
Q psy11727        419 ISPTNVLRHEFFL  431 (437)
Q Consensus       419 ~t~~e~l~Hp~~~  431 (437)
                      ||++|+|+||||+
T Consensus       258 ~s~~ell~Hp~fk  270 (270)
T d1t4ha_         258 YSIKDLLNHAFFQ  270 (270)
T ss_dssp             CCHHHHHTSGGGC
T ss_pred             cCHHHHhCCcccC
Confidence            9999999999996

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.1e-56  Score=437.94  Aligned_cols=253  Identities=26%  Similarity=0.435  Sum_probs=219.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++++.||+|+||+||+|+++.+|+.||||++...    ......+.+|+.+++.+     .|||||+++++|.+.+
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~  114 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-----CCCcEeeccccccccc
Confidence            46899999999999999999999999999999998632    12234566777777665     7999999999999999


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+++||||+.+ +|.+++....  .+++..++.++.||+.||.|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus       115 ~~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~--~iiHRDIKP~NILl--~~~g~ikL~DFG~a  188 (350)
T d1rdqe_         115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL--DLIYRDLKPENLLI--DQQGYIQVTDFGFA  188 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CTTSCEEECCCTTC
T ss_pred             ccccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC--CEecCcCCHHHccc--CCCCCEEeeeceee
Confidence            99999999965 7888887654  599999999999999999999954  89999999999999  67889999999999


Q ss_pred             eecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        264 CHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       264 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      +.......+.+||+.|+|||++.+..|+.++|||||||++|||+||++||.+.+....+.+|......+|..        
T Consensus       189 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~--------  260 (350)
T d1rdqe_         189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--------  260 (350)
T ss_dssp             EECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT--------
T ss_pred             eecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCcc--------
Confidence            998877778899999999999999999999999999999999999999999999888888876532211110        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC----
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI----  419 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~----  419 (437)
                                                                             ....+.+||++||+.||.+|+    
T Consensus       261 -------------------------------------------------------~s~~~~~li~~~L~~dP~kR~~~~r  285 (350)
T d1rdqe_         261 -------------------------------------------------------FSSDLKDLLRNLLQVDLTKRFGNLK  285 (350)
T ss_dssp             -------------------------------------------------------CCHHHHHHHHHHSCSCTTTCTTSST
T ss_pred             -------------------------------------------------------CCHHHHHHHHHHhhhCHHhcccccc
Confidence                                                                   001578999999999999995    


Q ss_pred             -CHHHHhcCCCcCcCCC
Q psy11727        420 -SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       420 -t~~e~l~Hp~~~~~~~  435 (437)
                       |++++++||||++.++
T Consensus       286 ~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         286 NGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTTHHHHTSGGGTTCCH
T ss_pred             ccHHHHHcCccccCCCH
Confidence             9999999999998754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-56  Score=429.11  Aligned_cols=276  Identities=31%  Similarity=0.539  Sum_probs=220.2

Q ss_pred             eeceecccCceEEEEEEEcCCCeEEEEEEecCCc------ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        114 IDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK------PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       114 i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      .+++||+|+||+||+|+++.+|+.||||+++...      .....+.+|+.++..+     .|||||+++++|.+++++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-----CCCCEeEEEeeeccCCcee
Confidence            4678999999999999999999999999986432      1235677899998887     6899999999999999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||||+.+++...+.... ..+++..++.+++||+.||+|||++  ||+||||||+|||+  +.++.+||+|||+|....
T Consensus        77 ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~--~iiHrDiKp~NIli--~~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH--WILHRDLKPNNLLL--DENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             EEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTCCEEECCCGGGSTTT
T ss_pred             ehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhcc--ceecccCCcceEEe--cCCCccccccCccccccC
Confidence            999999887776665543 5699999999999999999999964  89999999999999  778899999999997664


Q ss_pred             Cc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        268 QT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       268 ~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      ..   ....+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.+..+++.+|.+.++.|+...+......
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~  231 (299)
T d1ua2a_         152 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL  231 (299)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred             CCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhcc
Confidence            42   3356899999999999754 6899999999999999999999999999999999999999998887655433322


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                      ..+...                ...+. ..+..+..                  .....++|||.+||++||++|||++|
T Consensus       232 ~~~~~~----------------~~~~~-~~~~~~~~------------------~~s~~~~dll~~~L~~dP~~R~sa~e  276 (299)
T d1ua2a_         232 PDYVTF----------------KSFPG-IPLHHIFS------------------AAGDDLLDLIQGLFLFNPCARITATQ  276 (299)
T ss_dssp             TTCCCC----------------CCCCC-CCHHHHCT------------------TCCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             chhhhh----------------ccCCC-CChHHhcc------------------cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            111000                00000 00111100                  01136899999999999999999999


Q ss_pred             HhcCCCcCcCC
Q psy11727        424 VLRHEFFLKHS  434 (437)
Q Consensus       424 ~l~Hp~~~~~~  434 (437)
                      ||+||||++..
T Consensus       277 ~L~Hp~f~~~p  287 (299)
T d1ua2a_         277 ALKMKYFSNRP  287 (299)
T ss_dssp             HHTSGGGTSSS
T ss_pred             HhCCHhhCCCC
Confidence            99999998743

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.9e-55  Score=417.48  Aligned_cols=257  Identities=29%  Similarity=0.450  Sum_probs=216.7

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----------cchHHHHHHHHHHHhhhcCCCCCcEEEec
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----------FLNQAQIEVQLLEKINKADIHSRYIVKLK  177 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~  177 (437)
                      |.++|++.+.||+|+||+||+|++..+|+.||||++.....          ....+.+|+.++..+.    .|||||+++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~   76 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS----GHPNIIQLK   76 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEE
Confidence            46899999999999999999999999999999999975421          1234667888888884    489999999


Q ss_pred             ceeeECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        178 GHFTWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       178 ~~~~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                      ++|.+++++|||||||++ +|.+++....  .+++..++.++.||+.||+|||+  .|||||||||+|||+  +.++.+|
T Consensus        77 ~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill--~~~~~~k  150 (277)
T d1phka_          77 DTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHK--LNIVHRDLKPENILL--DDDMNIK  150 (277)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH--TTEECSCCSGGGEEE--CTTCCEE
T ss_pred             eecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH--cCCcccccccceEEE--cCCCCeE
Confidence            999999999999999965 8999997754  59999999999999999999995  489999999999999  7788999


Q ss_pred             EEeCCCceecCC--ccccccccccccChhhhcC------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q psy11727        257 IIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLG------IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV  328 (437)
Q Consensus       257 L~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  328 (437)
                      |+|||+++....  .....+||+.|+|||++.+      ..++.++||||+||++|||++|++||.+.+..+....+...
T Consensus       151 l~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~  230 (277)
T d1phka_         151 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  230 (277)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhC
Confidence            999999987754  3455789999999999863      35788999999999999999999999999988888877664


Q ss_pred             hCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHH
Q psy11727        329 LGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLIL  408 (437)
Q Consensus       329 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  408 (437)
                      ...++.....                                                           .....+++||.
T Consensus       231 ~~~~~~~~~~-----------------------------------------------------------~~s~~~~~li~  251 (277)
T d1phka_         231 NYQFGSPEWD-----------------------------------------------------------DYSDTVKDLVS  251 (277)
T ss_dssp             CCCCCTTTGG-----------------------------------------------------------GSCHHHHHHHH
T ss_pred             CCCCCCcccc-----------------------------------------------------------cCCHHHHHHHH
Confidence            2211110000                                                           00126799999


Q ss_pred             HccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        409 RMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       409 ~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      +||+.||.+|||++|||+||||++.
T Consensus       252 ~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         252 RFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHccCChhHCcCHHHHHcCHHHHHh
Confidence            9999999999999999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-56  Score=428.44  Aligned_cols=253  Identities=25%  Similarity=0.344  Sum_probs=208.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc----chHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF----LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ...|++.+.||+|+||+||+|++..+++.||||++......    ...+.+|+.++..+     .|||||+++++|.+++
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~   88 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLREH   88 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETT
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-----CCCCEeeEEEEEEECC
Confidence            34699999999999999999999999999999999744321    23455677777655     7999999999999999


Q ss_pred             EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        185 HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ++|+|||||.+++.+.+.... ..+++..++.++.||+.||.|||++  |||||||||+|||+  +.++.+||+|||+|.
T Consensus        89 ~~~iv~E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~--~iiHrDiKp~NILl--~~~~~~Kl~DFG~a~  163 (309)
T d1u5ra_          89 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH--NMIHRDVKAGNILL--SEPGLVKLGDFGSAS  163 (309)
T ss_dssp             EEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCSGGGEEE--ETTTEEEECCCTTCB
T ss_pred             EEEEEEEecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC--CEeccCCCcceEEE--CCCCCEEEeeccccc
Confidence            999999999876555443333 4699999999999999999999964  89999999999999  567889999999998


Q ss_pred             ecCCccccccccccccChhhhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVGQTLYQYIQSRYYRSPEVLLG---IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..... ...+||+.|+|||++.+   ..|+.++|||||||++|||++|++||.+.+..+.+..+......++..      
T Consensus       164 ~~~~~-~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------  236 (309)
T d1u5ra_         164 IMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQS------  236 (309)
T ss_dssp             SSSSB-CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC------
T ss_pred             ccCCC-CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCC------
Confidence            76543 45789999999999975   358999999999999999999999999988887777765421111000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                             ......+.+||.+||+.||.+|||+
T Consensus       237 -------------------------------------------------------~~~s~~~~~li~~~L~~dP~~Rpt~  261 (309)
T d1u5ra_         237 -------------------------------------------------------GHWSEYFRNFVDSCLQKIPQDRPTS  261 (309)
T ss_dssp             -------------------------------------------------------TTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             -------------------------------------------------------CCCCHHHHHHHHHHCcCChhHCcCH
Confidence                                                                   0001257999999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      +|+|+||||++.
T Consensus       262 ~ell~Hp~~~~~  273 (309)
T d1u5ra_         262 EVLLKHRFVLRE  273 (309)
T ss_dssp             HHHTTCHHHHSC
T ss_pred             HHHHhCHHhcCC
Confidence            999999999764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-56  Score=419.13  Aligned_cols=253  Identities=25%  Similarity=0.344  Sum_probs=196.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc---chHHHHHHHHHHHhhhcCCCCCcEEEecceeeE--C
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF---LNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW--K  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~--~  183 (437)
                      .++|++.+.||+|+||+||+|+++.+|+.||||++......   ...+.+|+.++..     +.|||||++++++.+  .
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~-----l~HpnIv~~~~~~~~~~~   77 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE-----LKHPNIVRYYDRIIDRTN   77 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTS-----CCCTTBCCEEEEEEC---
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHH-----CCCCCEeeEEEEEEeCCC
Confidence            46899999999999999999999999999999999754321   2234455555544     489999999999864  4


Q ss_pred             CEEEEEEEeccC-cHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhcCCC---CCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNT--NFHGVSLNLTKKFAQQLCCALAFLSSPE---LSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~--~~~~ls~~~~~~i~~qi~~aL~~LH~~~---~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      +.+|+|||||++ +|.+++...  ....+++..++.++.||+.||+|||+++   .+||||||||+|||+  +.++.+||
T Consensus        78 ~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll--~~~~~vkl  155 (269)
T d2java1          78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKL  155 (269)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE--CTTSCEEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc--CCCCcEEE
Confidence            578999999965 899988642  2356999999999999999999999642   249999999999999  67889999


Q ss_pred             EeCCCceecCCc---cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        258 IDFGSSCHVGQT---LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       258 ~DFG~s~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +|||+|......   ....+||+.|+|||++.+..|+.++|||||||++|||+||++||.+.+..+....+....-.+. 
T Consensus       156 ~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~-  234 (269)
T d2java1         156 GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI-  234 (269)
T ss_dssp             CCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-
T ss_pred             eeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence            999999765432   3457899999999999999999999999999999999999999999988887777755211000 


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                        |                       ..    -...+.+||.+||+.|
T Consensus       235 ----------------------------------~-----------------------~~----~s~~l~~li~~~L~~d  253 (269)
T d2java1         235 ----------------------------------P-----------------------YR----YSDELNEIITRMLNLK  253 (269)
T ss_dssp             ----------------------------------C-----------------------TT----SCHHHHHHHHHHTCSS
T ss_pred             ----------------------------------C-----------------------cc----cCHHHHHHHHHHcCCC
Confidence                                              0                       00    0015789999999999


Q ss_pred             CCCCCCHHHHhcCCCc
Q psy11727        415 PKKRISPTNVLRHEFF  430 (437)
Q Consensus       415 P~~R~t~~e~l~Hp~~  430 (437)
                      |.+|||++|+|+|||+
T Consensus       254 p~~Rps~~ell~hp~i  269 (269)
T d2java1         254 DYHRPSVEEILENPLI  269 (269)
T ss_dssp             GGGSCCHHHHHTSTTC
T ss_pred             hhHCcCHHHHHhCCcC
Confidence            9999999999999996

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-55  Score=426.31  Aligned_cols=281  Identities=28%  Similarity=0.511  Sum_probs=226.0

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      +.++|++++.||+|+||+||+|.+..+|+.||||+++...   .....+.+|+.+++.+     .|||||+++++|...+
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpniv~l~~~~~~~~   90 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDE   90 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBTTBCCCSEEECSCS
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-----CCCCeeEEEEEeccCc
Confidence            5789999999999999999999999999999999997432   2234567788888876     6899999999998654


Q ss_pred             ------EEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        185 ------HLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       185 ------~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                            ++|+||||++++|..+++..   .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+
T Consensus        91 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~--~IiHrDiKp~NIL~--~~~~~~kl~  163 (346)
T d1cm8a_          91 TLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAV--NEDCELKIL  163 (346)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEEC
T ss_pred             cccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhC--CCcccccCcchhhc--ccccccccc
Confidence                  67999999987888877654   499999999999999999999964  89999999999999  778899999


Q ss_pred             eCCCceecCCccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        259 DFGSSCHVGQTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       259 DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |||+|...........||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+....+..+....+.|+..++
T Consensus       164 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
T d1cm8a_         164 DFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV  243 (346)
T ss_dssp             CCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             cccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHH
Confidence            999999998888889999999999999874 5789999999999999999999999999999999999999999998887


Q ss_pred             ccCCccch--hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCC
Q psy11727        338 HGASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDP  415 (437)
Q Consensus       338 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP  415 (437)
                      ........  +....+..                ....+..+                  .......++|||.+||++||
T Consensus       244 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~------------------~~~~s~~~~dli~~mL~~dP  289 (346)
T d1cm8a_         244 QRLQSDEAKNYMKGLPEL----------------EKKDFASI------------------LTNASPLAVNLLEKMLVLDA  289 (346)
T ss_dssp             HTCSCHHHHHHHHHSCCC----------------CCCCGGGT------------------CTTCCHHHHHHHHHHSCSST
T ss_pred             hhhcchhhhhhhccCCcc----------------cccchHHh------------------ccCCCHHHHHHHHHHCcCCh
Confidence            65543221  11111000                00000000                  00111257899999999999


Q ss_pred             CCCCCHHHHhcCCCcCcCC
Q psy11727        416 KKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       416 ~~R~t~~e~l~Hp~~~~~~  434 (437)
                      .+|||++|||+||||++..
T Consensus       290 ~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         290 EQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             TTSCCHHHHHHSGGGTTTC
T ss_pred             hHCcCHHHHhcChhhCcCC
Confidence            9999999999999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.6e-55  Score=415.79  Aligned_cols=278  Identities=32%  Similarity=0.536  Sum_probs=221.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++.+.||+|+||+||+|+++ +|+.||||+++...   ....++.+|+.+++.+     .|||||+++++|.+.++.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEeeeeecccCCce
Confidence            68999999999999999999985 78899999996542   2345677888888776     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +++||++.+++...+.... +.+++..++.++.||+.||+|||+  .|||||||||+|||+  +.++.+||+|||.|...
T Consensus        76 ~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~--~~IvHrDiKp~NIll--~~~~~~kl~DfG~a~~~  150 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD--RRVLHRDLKPQNLLI--NREGELKIADFGLARAF  150 (286)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEE--CTTSCEEECCTTHHHHH
T ss_pred             eEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhcc--CcEEecCCCCceeeE--cCCCCEEecccccceec
Confidence            9999999998777776544 569999999999999999999995  489999999999999  67889999999999776


Q ss_pred             CCc---cccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        267 GQT---LYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       267 ~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...   .....+++.|+|||++.+. .++.++|+|||||++|||++|++||.+.+..+++.++....+.|+...+.....
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  230 (286)
T d1ob3a_         151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE  230 (286)
T ss_dssp             CC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             ccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhh
Confidence            443   3345689999999999765 578999999999999999999999999999999999999999887666544332


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                      ...+......            ....+    ...                  ........+.|||.+||++||++|||++
T Consensus       231 ~~~~~~~~~~------------~~~~~----~~~------------------~~~~~s~~~~dli~~~L~~dP~~R~s~~  276 (286)
T d1ob3a_         231 LPKYDPNFTV------------YEPLP----WES------------------FLKGLDESGIDLLSKMLKLDPNQRITAK  276 (286)
T ss_dssp             STTCCTTCCC------------CCCCC----GGG------------------TCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hhhccccccc------------ccCcc----hhh------------------hcccCCHHHHHHHHHHccCChhHCcCHH
Confidence            2211110000            00000    000                  0001112678999999999999999999


Q ss_pred             HHhcCCCcCc
Q psy11727        423 NVLRHEFFLK  432 (437)
Q Consensus       423 e~l~Hp~~~~  432 (437)
                      |+|+||||++
T Consensus       277 ell~Hp~f~~  286 (286)
T d1ob3a_         277 QALEHAYFKE  286 (286)
T ss_dssp             HHHTSGGGGC
T ss_pred             HHhcCcccCc
Confidence            9999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-55  Score=425.70  Aligned_cols=252  Identities=28%  Similarity=0.445  Sum_probs=211.4

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.+.||+|+||+||+|+++.+++.||||++++..    ........|..++...    +.|||||+++++|.++++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~----~~hp~Iv~~~~~~~~~~~   77 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHMFCTFQTKEN   77 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH----TTCTTBCCEEEEEECSSE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHh----CCCCcEEEEEEEEccCCc
Confidence            68999999999999999999999999999999996421    2223444555554432    389999999999999999


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      +||||||+++ +|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  ++++.+||+|||+|+
T Consensus        78 ~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~--~iiHrDikp~NiL~--~~~~~~kl~DFG~a~  151 (320)
T d1xjda_          78 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK--GIVYRDLKLDNILL--DKDGHIKIADFGMCK  151 (320)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT--TCBCCCCCGGGEEE--CTTSCEEECCCTTCB
T ss_pred             eeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC--CeeeccCcccceee--cCCCceeccccchhh
Confidence            9999999965 8999887654  589999999999999999999965  89999999999999  778899999999997


Q ss_pred             ecC---CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        265 HVG---QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       265 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ...   ......+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++.++....-..|..      
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~------  225 (320)
T d1xjda_         152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW------  225 (320)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT------
T ss_pred             hcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc------
Confidence            653   23345689999999999999999999999999999999999999999999888887775421110000      


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                                                                               ....+.+||++||+.||.+|||+
T Consensus       226 ---------------------------------------------------------~s~~~~dli~~~L~~dP~~R~s~  248 (320)
T d1xjda_         226 ---------------------------------------------------------LEKEAKDLLVKLFVREPEKRLGV  248 (320)
T ss_dssp             ---------------------------------------------------------SCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             ---------------------------------------------------------CCHHHHHHHHHhcccCCCCCcCH
Confidence                                                                     00157999999999999999999


Q ss_pred             H-HHhcCCCcCcCC
Q psy11727        422 T-NVLRHEFFLKHS  434 (437)
Q Consensus       422 ~-e~l~Hp~~~~~~  434 (437)
                      + ++++||||++.+
T Consensus       249 ~~~l~~hpff~~~~  262 (320)
T d1xjda_         249 RGDIRQHPLFREIN  262 (320)
T ss_dssp             BSCGGGSGGGTTCC
T ss_pred             HHHHHhCchhccCC
Confidence            6 899999998864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-54  Score=421.55  Aligned_cols=279  Identities=32%  Similarity=0.533  Sum_probs=221.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE------CC
Q psy11727        111 RYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW------KN  184 (437)
Q Consensus       111 ~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~------~~  184 (437)
                      +|...++||+|+||+||+|++..+|+.||||++......   ..+|+.++..+     .|+|||+++++|..      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l-----~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHC-----CCTTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhc-----CCCCCCcEEEEEEecCccCCce
Confidence            699999999999999999999999999999999765433   23688888876     68999999999854      34


Q ss_pred             EEEEEEEeccCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC-CCEEEEeCC
Q psy11727        185 HLCLVFELLSYNLYNLIRN--TNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR-SAIKIIDFG  261 (437)
Q Consensus       185 ~~~lV~E~~~~~L~~~l~~--~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~-~~ikL~DFG  261 (437)
                      ++|||||||++++.+.+..  .....+++..++.++.||+.||+|||++  |||||||||+|||+  +.+ ..+||+|||
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~--~IiHrDiKp~NILl--~~~~~~~kl~DFG  168 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF--GICHRDIKPQNLLL--DPDTAVLKLCDFG  168 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--TEECCCCCGGGEEE--CTTTCCEEECCCT
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc--CCcccCCCcceEEE--ecCCCceeEeccc
Confidence            6899999999887766643  2345699999999999999999999964  89999999999999  544 479999999


Q ss_pred             CceecC--CccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        262 SSCHVG--QTLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       262 ~s~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ++....  ....+.+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+++..+.+.+|.|+..++.
T Consensus       169 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~  248 (350)
T d1q5ka_         169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR  248 (350)
T ss_dssp             TCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             chhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhh
Confidence            998763  34456789999999999876 468999999999999999999999999999999999999999999887775


Q ss_pred             cCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCC
Q psy11727        339 GASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKR  418 (437)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R  418 (437)
                      .......      ...+.....       .+    +..+                 ........+.|||.+||++||.+|
T Consensus       249 ~~~~~~~------~~~~~~~~~-------~~----~~~~-----------------~~~~~s~~~~dLl~~mL~~dP~~R  294 (350)
T d1q5ka_         249 EMNPNYT------EFKFPQIKA-------HP----WTKV-----------------FRPRTPPEAIALCSRLLEYTPTAR  294 (350)
T ss_dssp             HHCC---------CCCCCCCCC-------CC----GGGT-----------------SCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             hhccchh------hcccccccc-------Cc----hhhh-----------------cccCCCHHHHHHHHHHccCChhHC
Confidence            4332100      000000000       00    0000                 000111257899999999999999


Q ss_pred             CCHHHHhcCCCcCcCCC
Q psy11727        419 ISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       419 ~t~~e~l~Hp~~~~~~~  435 (437)
                      ||++|||+||||++...
T Consensus       295 ~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         295 LTPLEACAHSFFDELRD  311 (350)
T ss_dssp             CCHHHHHTSGGGGGGGC
T ss_pred             cCHHHHhcCHhhccccC
Confidence            99999999999987543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-55  Score=427.00  Aligned_cols=262  Identities=26%  Similarity=0.438  Sum_probs=207.6

Q ss_pred             eeccCeeeec-eecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        107 KFLDRYEIDT-LLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       107 ~~~~~y~i~~-~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .+.++|.+.. +||+|+||+||+|++..+++.||||+++..    ....+|+.++.++.    .|||||+++++|++   
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~----~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEET
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhc----CCCCCCeEEEEEeeccc
Confidence            3467899875 699999999999999999999999999743    56677888776553    78999999999976   


Q ss_pred             -CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC-CCCCEEEEe
Q psy11727        183 -KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP-KRSAIKIID  259 (437)
Q Consensus       183 -~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~-~~~~ikL~D  259 (437)
                       +.++|||||||+| +|.+++.......+++..++.|+.||+.||+|||+  .||+||||||+|||++.+ ..+.+||+|
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~--~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH--cCCccccccccccccccccccccccccc
Confidence             4689999999965 89999987665679999999999999999999995  489999999999999542 356799999


Q ss_pred             CCCceecC--CccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        260 FGSSCHVG--QTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       260 FG~s~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      ||+|+...  ......+||+.|+|||++.+..|+.++|||||||++|+|+||++||.+.+.......+.....       
T Consensus       158 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~-------  230 (335)
T d2ozaa1         158 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR-------  230 (335)
T ss_dssp             CTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC-------
T ss_pred             cceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh-------
Confidence            99998653  334567899999999999999999999999999999999999999988765444443322100       


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                    .+.+           ..|..                       ........+.+||++||+.||.+
T Consensus       231 --------------~~~~-----------~~~~~-----------------------~~~~~s~~~~~li~~~L~~dP~~  262 (335)
T d2ozaa1         231 --------------MGQY-----------EFPNP-----------------------EWSEVSEEVKMLIRNLLKTEPTQ  262 (335)
T ss_dssp             --------------SCSS-----------SCCTT-----------------------HHHHSCHHHHHHHHHHSCSSTTT
T ss_pred             --------------cCCC-----------CCCCc-----------------------ccccCCHHHHHHHHHHccCChhH
Confidence                          0000           00000                       00001126799999999999999


Q ss_pred             CCCHHHHhcCCCcCcC
Q psy11727        418 RISPTNVLRHEFFLKH  433 (437)
Q Consensus       418 R~t~~e~l~Hp~~~~~  433 (437)
                      |||++|+|+||||++.
T Consensus       263 R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         263 RMTITEFMNHPWIMQS  278 (335)
T ss_dssp             SCCHHHHHHSHHHHTT
T ss_pred             CcCHHHHHcCHHhhCC
Confidence            9999999999999764

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-54  Score=427.69  Aligned_cols=259  Identities=23%  Similarity=0.373  Sum_probs=208.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc----ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      .++|++.++||+|+||+||+|++..+|+.||||++....    ........|...++.+.+  ..|||||+++++|.+.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~--~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEECSS
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEEECC
Confidence            468999999999999999999999999999999986322    112334455555555543  47999999999999999


Q ss_pred             EEEEEEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|+|||||+ |+|.+++....  .+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~--~iiHrDlKP~NILl--~~~g~iKl~DFGla  154 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR--FVVYRDLKPANILL--DEHGHVRISDLGLA  154 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--CSSSCEEECCCTTC
T ss_pred             EEEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHC--CccceeeccceeEE--cCCCcEEEeeecee
Confidence            9999999996 58999987753  589999999999999999999964  89999999999999  77889999999999


Q ss_pred             eecCC-ccccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        264 CHVGQ-TLYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       264 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      +.... .....+||+.|+|||++.+ ..|+.++|||||||++|||+||++||.+.+..+...........++.       
T Consensus       155 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~-------  227 (364)
T d1omwa3         155 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-------  227 (364)
T ss_dssp             EECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCC-------
T ss_pred             eecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-------
Confidence            87644 3456789999999999974 56899999999999999999999999876544333222111111100       


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCC-
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRIS-  420 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t-  420 (437)
                                                .|                       ..    ....+.+||.+||+.||.+||| 
T Consensus       228 --------------------------~~-----------------------~~----~s~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         228 --------------------------LP-----------------------DS----FSPELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             --------------------------CC-----------------------SS----SCHHHHHHHHHHTCSSTTTSTTT
T ss_pred             --------------------------CC-----------------------CC----CCHHHHHHHHHHcccCHHHhCCC
Confidence                                      00                       00    0125799999999999999999 


Q ss_pred             ----HHHHhcCCCcCcCCC
Q psy11727        421 ----PTNVLRHEFFLKHSV  435 (437)
Q Consensus       421 ----~~e~l~Hp~~~~~~~  435 (437)
                          ++|+++||||++.++
T Consensus       255 ~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         255 LGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             SSSTHHHHHTSGGGTTCCH
T ss_pred             cccCHHHHHcCccccCCCH
Confidence                799999999998653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-53  Score=418.13  Aligned_cols=299  Identities=31%  Similarity=0.519  Sum_probs=223.9

Q ss_pred             ceeecCc-e--eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcE
Q psy11727        100 YIIKHGE-K--FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYI  173 (437)
Q Consensus       100 ~~~~~~~-~--~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~i  173 (437)
                      |.+..++ .  +.++|+++++||+|+||+||+|++..+|+.||||++....   ....++.+|+.+++.+     .||||
T Consensus         4 ~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpnI   78 (355)
T d2b1pa1           4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNI   78 (355)
T ss_dssp             EEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-----CCTTB
T ss_pred             EEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-----CCCCe
Confidence            4556666 3  3489999999999999999999999999999999997542   2234566788888776     78999


Q ss_pred             EEecceeeE------CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEE
Q psy11727        174 VKLKGHFTW------KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILL  247 (437)
Q Consensus       174 v~l~~~~~~------~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll  247 (437)
                      |+++++|..      ..++|+|||||.+++.+.+.    ..+++..++.++.||+.||+|||+  .||+||||||+|||+
T Consensus        79 v~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~--~giiHrDlKP~Nil~  152 (355)
T d2b1pa1          79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVV  152 (355)
T ss_dssp             CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCSCCCGGGEEE
T ss_pred             eEEEEEEecccccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhh--cccccccCCcccccc
Confidence            999999963      47999999999998887664    348999999999999999999995  489999999999999


Q ss_pred             ecCCCCCEEEEeCCCceecCC--ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy11727        248 CSPKRSAIKIIDFGSSCHVGQ--TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKI  325 (437)
Q Consensus       248 ~~~~~~~ikL~DFG~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i  325 (437)
                        +.++.+|++|||++.....  .....+||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+...+..++
T Consensus       153 --~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i  230 (355)
T d2b1pa1         153 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  230 (355)
T ss_dssp             --CTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             --ccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHH
Confidence              6788899999999876543  334567899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCChhhhccCCccc-hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHH
Q psy11727        326 IEVLGMPPGYLLHGASKTS-KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFK  404 (437)
Q Consensus       326 ~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (437)
                      ...++.|+...+....... .++.......    .            ........      .................++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~~~~~~~~------~~~~~~~~~~~~~~s~~~~  288 (355)
T d2b1pa1         231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYA----G------------LTFPKLFP------DSLFPADSEHNKLKASQAR  288 (355)
T ss_dssp             HHHHCCCCHHHHTTSCHHHHHHHHTSCCCC----C------------CCHHHHSC------GGGSCCSSHHHHHHHHHHH
T ss_pred             HHhccCCCHHHHHHhhhhHHHHhhcCcccc----c------------cccccccc------cccccccccccccCCHHHH
Confidence            9999988888776554332 2222111000    0            00000000      0000000111122334689


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCcCcC
Q psy11727        405 DLILRMLTYDPKKRISPTNVLRHEFFLKH  433 (437)
Q Consensus       405 dli~~~L~~dP~~R~t~~e~l~Hp~~~~~  433 (437)
                      |||++||.+||++||||+|||+||||+..
T Consensus       289 dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         289 DLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-54  Score=408.24  Aligned_cols=250  Identities=25%  Similarity=0.408  Sum_probs=204.6

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc-------cchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP-------FLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~-------~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++.....       ...++.+|+.+++.+++   .|||||+++++|
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~---~h~nIv~~~~~~   78 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRLLDWF   78 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCEEEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc---CCCCccEEEEEE
Confidence            45789999999999999999999999999999999964321       12345679999998863   589999999999


Q ss_pred             eECCEEEEEEEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEE
Q psy11727        181 TWKNHLCLVFELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKII  258 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~  258 (437)
                      .+.+.+++|||++.+  ++.+++...  ..+++..++.++.||+.||+|||++  |||||||||+|||++. +++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~--~iiHrDiKp~NIll~~-~~~~vkl~  153 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC--GVLHRDIKDENILIDL-NRGELKLI  153 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEEET-TTTEEEEC
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC--CCccccCcccceEEec-CCCeEEEC
Confidence            999999999999954  677777665  3599999999999999999999964  8999999999999952 45689999


Q ss_pred             eCCCceecCCc-cccccccccccChhhhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        259 DFGSSCHVGQT-LYQYIQSRYYRSPEVLLGIPY-DLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       259 DFG~s~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |||+|+..... ..+.+||+.|+|||++.+..+ +.++|||||||++|||++|++||.+.+      .+....-.     
T Consensus       154 DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~~-----  222 (273)
T d1xwsa_         154 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF-----  222 (273)
T ss_dssp             CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCC-----
T ss_pred             ccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhcccC-----
Confidence            99999876544 345789999999999987765 567999999999999999999997632      12111000     


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                +                     +  .                     .    ....+.+||.+||+.||.
T Consensus       223 ----------~---------------------~--~---------------------~----~s~~~~~li~~~L~~dp~  244 (273)
T d1xwsa_         223 ----------F---------------------R--Q---------------------R----VSSECQHLIRWCLALRPS  244 (273)
T ss_dssp             ----------C---------------------S--S---------------------C----CCHHHHHHHHHHTCSSGG
T ss_pred             ----------C---------------------C--C---------------------C----CCHHHHHHHHHHccCCHh
Confidence                      0                     0  0                     0    002579999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCC
Q psy11727        417 KRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~  434 (437)
                      +|||++|+|+||||++..
T Consensus       245 ~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         245 DRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             GSCCHHHHHTSGGGSSCC
T ss_pred             HCcCHHHHhcCHhhCCCC
Confidence            999999999999998753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-53  Score=410.40  Aligned_cols=283  Identities=27%  Similarity=0.440  Sum_probs=221.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCC---cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK---KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW---  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~---~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~---  182 (437)
                      .++|++++.||+|+||+||+|++..+|+.||||++...   .....++.+|+.+++.+     .|+||+++++.+..   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~nii~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-----cCCCccceEeeeecccc
Confidence            58999999999999999999999999999999998533   23445678899999887     68899999998754   


Q ss_pred             -----CCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        183 -----KNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       183 -----~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                           .+++|+|||++++++........ ..+++..++.++.||+.||.|||+  .|||||||||+|||+  +.++.+||
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~--~~ivHrDlKp~NILl--~~~~~~kl  158 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR--NKILHRDMKAANVLI--TRDGVLKL  158 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCCGGGEEE--CTTSCEEE
T ss_pred             cccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhcc--CCEEecCcCchheee--cCCCcEEe
Confidence                 35689999999988877665443 569999999999999999999995  489999999999999  67889999


Q ss_pred             EeCCCceecCC-------ccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q psy11727        258 IDFGSSCHVGQ-------TLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVL  329 (437)
Q Consensus       258 ~DFG~s~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~  329 (437)
                      +|||++...+.       ...+.+||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+....+..+....
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~  238 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  238 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhc
Confidence            99999976542       22346799999999999865 68999999999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHH
Q psy11727        330 GMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILR  409 (437)
Q Consensus       330 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  409 (437)
                      +.++............+... ..              .........+.+.                .......++|||.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~----------------~~~~~~~~~dLl~~  287 (318)
T d3blha1         239 GSITPEVWPNVDNYELYEKL-EL--------------VKGQKRKVKDRLK----------------AYVRDPYALDLIDK  287 (318)
T ss_dssp             CCCCTTTSTTCCCC--------C--------------CSSCCBCHHHHHH----------------HHHCCHHHHHHHHH
T ss_pred             CCCChhhccccchhhhhhhh-cc--------------cccccccchhhhc----------------cccCCHHHHHHHHH
Confidence            88877665544332211100 00              0000000111100                00112357899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCc
Q psy11727        410 MLTYDPKKRISPTNVLRHEFFLK  432 (437)
Q Consensus       410 ~L~~dP~~R~t~~e~l~Hp~~~~  432 (437)
                      ||++||++|||++|+|+||||+.
T Consensus       288 mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         288 LLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             HCcCChhHCcCHHHHHcChhhcc
Confidence            99999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-52  Score=408.65  Aligned_cols=280  Identities=30%  Similarity=0.540  Sum_probs=219.5

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC---
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK---  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~---  183 (437)
                      .++|++++.||+|+||+||+|++..+|+.||||++....  ....++.+|+.+++.+     .||||+++++++...   
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSSTT
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-----CCCCCCcEEEEEeecccc
Confidence            478999999999999999999999999999999997432  2344667899998887     688999999998754   


Q ss_pred             --CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        184 --NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       184 --~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                        .++|+++++++++|.+++...   .+++..++.++.||+.||+|||++  |||||||||+|||+  ++++.+||+|||
T Consensus        82 ~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~--~iiHRDIKp~NILl--~~~~~~kl~DfG  154 (345)
T d1pmea_          82 QMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLL--NTTCDLKICDFG  154 (345)
T ss_dssp             TCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCCGGGEEE--CTTCCEEECCCT
T ss_pred             ccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC--CCcCCCCCcceEEE--CCCCCEEEcccC
Confidence              357788777788999999764   489999999999999999999964  89999999999999  678899999999


Q ss_pred             CceecCCc------cccccccccccChhhhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQT------LYQYIQSRYYRSPEVLLG-IPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +|......      ....+||+.|+|||++.. ..++.++||||+||++|+|++|++||.+.+..++...+...++.|..
T Consensus       155 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~  234 (345)
T d1pmea_         155 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  234 (345)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred             ceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCCh
Confidence            99765332      334678999999999854 46789999999999999999999999999999999999998888877


Q ss_pred             hhhccCCccc--hhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        335 YLLHGASKTS--KYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       335 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      ..........  .++...+..                ....+..+.                  ......+++||.+||+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~------------------~~~s~~~~~li~~~L~  280 (345)
T d1pmea_         235 EDLNCIINLKARNYLLSLPHK----------------NKVPWNRLF------------------PNADSKALDLLDKMLT  280 (345)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCC----------------CCCCHHHHC------------------TTSCHHHHHHHHHHSC
T ss_pred             hhhhhhhhhhhhcccccCCcc----------------CCCCHHHhC------------------CCCCHHHHHHHHHHcc
Confidence            6654433221  111111100                000000000                  0001257899999999


Q ss_pred             cCCCCCCCHHHHhcCCCcCcCC
Q psy11727        413 YDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       413 ~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      +||.+|||++|||+||||++..
T Consensus       281 ~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         281 FNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CChhHCcCHHHHhcCHhhccCC
Confidence            9999999999999999999754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-52  Score=395.69  Aligned_cols=280  Identities=29%  Similarity=0.491  Sum_probs=218.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      ++|++++.||+|+||+||+|++..+++.||||+++...   ....++.+|+.+++.+     .|||||+++++|.+.++.
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-----CcCCEEeeccccccccce
Confidence            68999999999999999999999999999999996433   2345666788777665     789999999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      ++|+|++.+++...+.... ..+++..++.++.|++.||+|||.  .|||||||||+|||+  +.++.+||+|||.|...
T Consensus        77 ~iv~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~lH~--~~IvHrDiKP~NIli--~~~~~~kl~DFG~a~~~  151 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHS--RNVLHRDLKPQNLLI--NRNGELKLANFGLARAF  151 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--CTTCCEEECCCTTCEEC
T ss_pred             eEEeeeccccccccccccc-cccchhHHHHHHHHHHHHHHHhhc--CCEeeecccCccccc--ccCCceeeeecchhhcc
Confidence            9999999875544443332 568999999999999999999995  489999999999999  66788999999999876


Q ss_pred             CCcc---ccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        267 GQTL---YQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPL-FSGKNEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       267 ~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~p-f~~~~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ....   ....+++.|+|||++.+.. ++.++|||||||++|||++|+.| |.+.+..+.+.++....+.|+...++...
T Consensus       152 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (292)
T d1unla_         152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             CSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             cCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhh
Confidence            5432   3456788899999998765 68999999999999999998866 67788888889888888877765443322


Q ss_pred             ccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCH
Q psy11727        342 KTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISP  421 (437)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~  421 (437)
                      ....+...      .          ..+..                  .............+.|||.+||++||.+|||+
T Consensus       232 ~~~~~~~~------~----------~~~~~------------------~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa  277 (292)
T d1unla_         232 KLPDYKPY------P----------MYPAT------------------TSLVNVVPKLNATGRDLLQNLLKCNPVQRISA  277 (292)
T ss_dssp             GSTTCCCC------C----------CCCTT------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             hccccccc------c----------ccccc------------------chhhhccccCCHHHHHHHHHHccCChhHCcCH
Confidence            21111000      0          00000                  00000111112367899999999999999999


Q ss_pred             HHHhcCCCcCcC
Q psy11727        422 TNVLRHEFFLKH  433 (437)
Q Consensus       422 ~e~l~Hp~~~~~  433 (437)
                      +|+|+||||++.
T Consensus       278 ~e~L~Hp~f~~~  289 (292)
T d1unla_         278 EEALQHPYFSDF  289 (292)
T ss_dssp             HHHTTSGGGSSC
T ss_pred             HHHhcChhhcCC
Confidence            999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-52  Score=410.45  Aligned_cols=281  Identities=30%  Similarity=0.568  Sum_probs=222.7

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--  183 (437)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++....   ...++.+|+.+++.+     .|+|||+++++|...  
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~h~~iv~~~~~~~~~~~   91 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARS   91 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCSS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEeeccc
Confidence            5799999999999999999999999999999999974322   234566788888887     689999999998643  


Q ss_pred             ----CEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        184 ----NHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       184 ----~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                          .++++++++++++|.+++...   .+++..++.++.||+.||+|||++  ||+||||||+|||+  +.++.+|++|
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~--giiHrDiKp~NILi--~~~~~~kl~d  164 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA--DIIHRDLKPSNLAV--NEDCELKILD  164 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCGGGEEE--CTTCCEEECC
T ss_pred             cccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhC--CCcccccCCccccc--cccccccccc
Confidence                345666555567899988553   599999999999999999999964  89999999999999  7788999999


Q ss_pred             CCCceecCCccccccccccccChhhhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhhc
Q psy11727        260 FGSSCHVGQTLYQYIQSRYYRSPEVLLGIP-YDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYLLH  338 (437)
Q Consensus       260 FG~s~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  338 (437)
                      ||+|........+..||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+.......+....+.++..+..
T Consensus       165 fg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             C----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             cchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            999998888888889999999999987764 6889999999999999999999999999999999999999998887776


Q ss_pred             cCCccch--hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        339 GASKTSK--YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       339 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                      .......  +......               .+.. .+....                  ......++|||.+||++||.
T Consensus       245 ~~~~~~~~~~~~~~~~---------------~~~~-~~~~~~------------------~~~s~~~~dli~~mL~~dP~  290 (348)
T d2gfsa1         245 KISSESARNYIQSLTQ---------------MPKM-NFANVF------------------IGANPLAVDLLEKMLVLDSD  290 (348)
T ss_dssp             TCCCHHHHHHHTTSCC---------------CCCC-CHHHHS------------------TTCCHHHHHHHHHHSCSSGG
T ss_pred             hccchhhhhhhhhccc---------------CCCc-chhhhc------------------CCCCHHHHHHHHHHCcCChh
Confidence            5443211  1111000               0000 000000                  01112579999999999999


Q ss_pred             CCCCHHHHhcCCCcCcCCC
Q psy11727        417 KRISPTNVLRHEFFLKHSV  435 (437)
Q Consensus       417 ~R~t~~e~l~Hp~~~~~~~  435 (437)
                      +|||++|||+||||++..+
T Consensus       291 ~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         291 KRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             GSCCHHHHHTSGGGTTTCC
T ss_pred             hCcCHHHHhcCHhhCCCCC
Confidence            9999999999999998653

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4.3e-52  Score=404.35  Aligned_cols=286  Identities=25%  Similarity=0.427  Sum_probs=214.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC--CEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK--NHL  186 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~--~~~  186 (437)
                      .++|++++.||+|+||+||+|++..+|+.||||+++..  ...++.+|+.+++.+.    .||||++++++|...  .++
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~----~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR----GGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHT----TSTTBCCEEEEEECTTTCSE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhcc----CCCCCcEEEEEEEecCCCce
Confidence            46899999999999999999999999999999999743  3467888999999885    589999999999854  579


Q ss_pred             EEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        187 CLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       187 ~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                      ++|||||++ +|..+     .+.+++..++.++.||+.||+|||++  |||||||||+|||++. +++.+||+|||+|..
T Consensus       108 ~~v~e~~~~~~L~~~-----~~~l~e~~i~~i~~qil~aL~~LH~~--gIvHrDiKp~NILi~~-~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         108 ALVFEHVNNTDFKQL-----YQTLTDYDIRFYMYEILKALDYCHSM--GIMHRDVKPHNVMIDH-EHRKLRLIDWGLAEF  179 (328)
T ss_dssp             EEEEECCCSCBGGGT-----TTSCCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEEET-TTTEEEECCGGGCEE
T ss_pred             eEEEeecCCCcHHHH-----hcCCCHHHHHHHHHHHHHHHHHHhhc--ccccccccccceEEcC-CCCeeeeccccccee
Confidence            999999976 55433     24589999999999999999999954  8999999999999953 344699999999977


Q ss_pred             cC--CccccccccccccChhhhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChhhhccCC
Q psy11727        266 VG--QTLYQYIQSRYYRSPEVLLGI-PYDLAIDMWSLGCILVELHTGEPLFSGK-NEVDQMTKIIEVLGMPPGYLLHGAS  341 (437)
Q Consensus       266 ~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~p~~~~~~~~~  341 (437)
                      ..  ......++|+.|+|||++.+. .++.++|||||||++|+|++|..||... +..++...+...+|.|.........
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~  259 (328)
T d3bqca1         180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  259 (328)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             ccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence            64  334567889999999998875 4799999999999999999999998654 4556777777777654333221111


Q ss_pred             cc--chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        342 KT--SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                      ..  ...+.                           .+++......... .............++|||++||++||.+||
T Consensus       260 ~~~~~~~~~---------------------------~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~mL~~dP~~R~  311 (328)
T d3bqca1         260 NIELDPRFN---------------------------DILGRHSRKRWER-FVHSENQHLVSPEALDFLDKLLRYDHQSRL  311 (328)
T ss_dssp             TCCCCGGGG---------------------------GTCCCCCCCCGGG-GCCTTTGGGCCHHHHHHHHHHSCSSGGGSC
T ss_pred             ccccCcccc---------------------------hhcccccccchhh-cccccccccCCHHHHHHHHHHccCChhHCc
Confidence            00  00000                           0000000000000 000000111123689999999999999999


Q ss_pred             CHHHHhcCCCcCcCCCC
Q psy11727        420 SPTNVLRHEFFLKHSVD  436 (437)
Q Consensus       420 t~~e~l~Hp~~~~~~~~  436 (437)
                      |++|||+||||+.+.+|
T Consensus       312 ta~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         312 TAREAMEHPYFYTVVKD  328 (328)
T ss_dssp             CHHHHHTSGGGTTSCCC
T ss_pred             CHHHHhcCcccCCCCCC
Confidence            99999999999998765

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-52  Score=398.89  Aligned_cols=253  Identities=22%  Similarity=0.311  Sum_probs=208.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++......+++.+|+.++..+     .|||||+++++|.+.+.+++
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhC-----CCCCEecCCccEeeCCeeEE
Confidence            4689999999999999999999999999999999986666667788999999887     68999999999999999999


Q ss_pred             EEEecc-CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLS-YNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~-~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||++ |+|.+++.......+++..+..++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|+...
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~--~iiHrDlKp~NILl--~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--NFIHRDLAARNCLV--GENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CGGGCEEECCCCCTTTCC
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC--CcccCccccCeEEE--CCCCcEEEccccceeecC
Confidence            999996 5899998876667799999999999999999999964  89999999999999  678899999999998664


Q ss_pred             Ccc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    ....|+..|+|||++.+..|+.++|||||||++|||++|. +||.+.+.......+......+.         
T Consensus       167 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~---------  237 (287)
T d1opja_         167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER---------  237 (287)
T ss_dssp             SSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC---------
T ss_pred             CCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCC---------
Confidence            332    2235788899999999999999999999999999999965 55556555544443322111000         


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                |                           ......+.+||.+||+.||.+|||++
T Consensus       238 --------------------------~---------------------------~~~~~~l~~li~~cl~~dP~~Rps~~  264 (287)
T d1opja_         238 --------------------------P---------------------------EGCPEKVYELMRACWQWNPSDRPSFA  264 (287)
T ss_dssp             --------------------------C---------------------------TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             --------------------------C---------------------------ccchHHHHHHHHHHcCCCHhHCcCHH
Confidence                                      0                           00012579999999999999999999


Q ss_pred             HHhc--CCCcCc
Q psy11727        423 NVLR--HEFFLK  432 (437)
Q Consensus       423 e~l~--Hp~~~~  432 (437)
                      |+++  ..++++
T Consensus       265 ei~~~L~~~~~~  276 (287)
T d1opja_         265 EIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHh
Confidence            9976  344443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.9e-52  Score=393.89  Aligned_cols=256  Identities=26%  Similarity=0.410  Sum_probs=201.2

Q ss_pred             ceeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcc----cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        106 EKFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKP----FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       106 ~~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~----~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||||+++....    ....+.+|+.++..+     .|||||++++++.
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-----~hpniv~~~~~~~   77 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-----NHPAIVAVYDTGE   77 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEE
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-----CCCCCCcccceee
Confidence            3567899999999999999999999999999999999974322    223456677777664     8999999999998


Q ss_pred             ECC----EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEE
Q psy11727        182 WKN----HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIK  256 (437)
Q Consensus       182 ~~~----~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ik  256 (437)
                      ..+    .+||||||++| +|.+++....  .+++..++.++.||+.||+|||+  .|||||||||+|||+  +.++.++
T Consensus        78 ~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~--~~iiHrDiKP~NIll--~~~~~~~  151 (277)
T d1o6ya_          78 AETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAVK  151 (277)
T ss_dssp             EECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHH--TTEECCCCSGGGEEE--ETTSCEE
T ss_pred             eccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHh--CCccCccccCccccc--Cccccce
Confidence            754    48999999976 7888877653  58999999999999999999995  489999999999999  5677899


Q ss_pred             EEeCCCceecCC------ccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q psy11727        257 IIDFGSSCHVGQ------TLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLG  330 (437)
Q Consensus       257 L~DFG~s~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~  330 (437)
                      |+|||.+.....      .....+||+.|+|||++.+..|+.++|||||||++|||+||++||.+.+..+.+.++.....
T Consensus       152 l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~  231 (277)
T d1o6ya_         152 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP  231 (277)
T ss_dssp             ECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC
T ss_pred             eehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCC
Confidence            999999865432      23456899999999999999999999999999999999999999999998888777765333


Q ss_pred             CCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHc
Q psy11727        331 MPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRM  410 (437)
Q Consensus       331 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~  410 (437)
                      .++....+.                                                           ....+.+||.+|
T Consensus       232 ~~~~~~~~~-----------------------------------------------------------~s~~l~~li~~~  252 (277)
T d1o6ya_         232 IPPSARHEG-----------------------------------------------------------LSADLDAVVLKA  252 (277)
T ss_dssp             CCGGGTSSS-----------------------------------------------------------CCHHHHHHHHHH
T ss_pred             CCCchhccC-----------------------------------------------------------CCHHHHHHHHHH
Confidence            222111100                                                           002578999999


Q ss_pred             cccCCCCCCCHHHHhcCCCcC
Q psy11727        411 LTYDPKKRISPTNVLRHEFFL  431 (437)
Q Consensus       411 L~~dP~~R~t~~e~l~Hp~~~  431 (437)
                      |+.||.+||+..+.|.|+|++
T Consensus       253 L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         253 LAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             TCSSGGGSCSSHHHHHHHHHH
T ss_pred             ccCCHhHCHhHHHHHHHHHHH
Confidence            999999999544455566653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-52  Score=389.63  Aligned_cols=245  Identities=22%  Similarity=0.319  Sum_probs=199.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|++.+.||+|+||+||+|++. ++..||||+++.......++.+|+.++..+     +|||||++++++.+++.+++|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhc-----CCCCcccccceeccCCceEEE
Confidence            57999999999999999999876 567899999987666667788899998887     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.... ..+++..+..++.||+.||+|||++  +|+||||||+|||+  ++++.+||+|||+|+....
T Consensus        79 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~--~iiHrDlKp~Nill--~~~~~~Kl~DFGla~~~~~  153 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA--CVIHRDLAARNCLV--GENQVIKVSDFGMTRFVLD  153 (263)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TCCCTTCSGGGEEE--CGGGCEEECSCC-------
T ss_pred             EEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhcc--ceeecccchhheee--cCCCCeEecccchheeccC
Confidence            999965 8888887654 4689999999999999999999964  79999999999999  6788999999999976543


Q ss_pred             c----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 T----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      .    .....||..|+|||++.+..|+.++|||||||++|||+| |.+||...+..+.+..+......+.+.        
T Consensus       154 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~--------  225 (263)
T d1sm2a_         154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR--------  225 (263)
T ss_dssp             -----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCT--------
T ss_pred             CCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCcc--------
Confidence            2    223568899999999999999999999999999999999 678888888877777765532211100        


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                            .....+.+||.+||+.||.+|||++|
T Consensus       226 ------------------------------------------------------~~~~~l~~li~~cl~~~p~~Rps~~~  251 (263)
T d1sm2a_         226 ------------------------------------------------------LASTHVYQIMNHCWKERPEDRPAFSR  251 (263)
T ss_dssp             ------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------------------------------------------------------ccCHHHHHHHHHHccCCHhHCcCHHH
Confidence                                                                  00125789999999999999999999


Q ss_pred             HhcC
Q psy11727        424 VLRH  427 (437)
Q Consensus       424 ~l~H  427 (437)
                      +++|
T Consensus       252 il~~  255 (263)
T d1sm2a_         252 LLRQ  255 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-52  Score=395.11  Aligned_cols=251  Identities=20%  Similarity=0.308  Sum_probs=207.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|..+ ++..||||+++......+.+.+|+.++..+     .|||||++++++.+ +.+++
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhC-----CCCCEeEEEeeecc-CCeEE
Confidence            468999999999999999999875 578899999986666667788999999887     68999999998764 56789


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+++ +|.+++.......+++..+..++.||+.||+|||++  ||+||||||+||||  ++++.+||+|||+|+...
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~--~ivHrDiKp~NIll--~~~~~~Kl~DFGla~~~~  160 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--NYIHRDLRAANILV--SDTLSCKIADFGLARLIE  160 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--CTTSCEEECCCTTCEECS
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcccCccchhheee--ecccceeeccccceEEcc
Confidence            9999965 788877655444689999999999999999999964  79999999999999  778899999999998764


Q ss_pred             Ccc----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QTL----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ...    ....||+.|+|||++.+..|+.++|||||||++|||+| |.+||...+..+.+..+......+...       
T Consensus       161 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~-------  233 (272)
T d1qpca_         161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD-------  233 (272)
T ss_dssp             SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT-------
T ss_pred             CCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcc-------
Confidence            322    23567889999999998899999999999999999999 567778777777666664321111000       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||++|||++
T Consensus       234 -------------------------------------------------------~~~~~l~~li~~cl~~~P~~Rpt~~  258 (272)
T d1qpca_         234 -------------------------------------------------------NCPEELYQLMRLCWKERPEDRPTFD  258 (272)
T ss_dssp             -------------------------------------------------------TCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             -------------------------------------------------------cChHHHHHHHHHHcCCCHhHCcCHH
Confidence                                                                   0012578999999999999999999


Q ss_pred             HHhc--CCCcCc
Q psy11727        423 NVLR--HEFFLK  432 (437)
Q Consensus       423 e~l~--Hp~~~~  432 (437)
                      |+++  |+||+.
T Consensus       259 ei~~~L~~~fts  270 (272)
T d1qpca_         259 YLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhc
Confidence            9998  899874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-51  Score=386.26  Aligned_cols=245  Identities=21%  Similarity=0.298  Sum_probs=207.8

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLV  189 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV  189 (437)
                      ++|++.+.||+|+||+||+|+.+ ++..||||+++......+.+.+|+.++..+     .|||||+++++|.+++.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l-----~HpnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhc-----CCCceeeEEEEEeeCCceEEE
Confidence            57889999999999999999974 788999999987666667788899888877     789999999999999999999


Q ss_pred             EEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCC
Q psy11727        190 FELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQ  268 (437)
Q Consensus       190 ~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~  268 (437)
                      |||+++ +|.+++.... ..+++..+..++.||+.||+|||++  ||+||||||+|||+  ++++.+||+|||+|+....
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~--~iiH~dlk~~Nill--~~~~~~kl~DfG~a~~~~~  152 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK--QFLHRDLAARNCLV--NDQGVVKVSDFGLSRYVLD  152 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT--TBCCSCCSGGGEEE--CTTCCEEECCCSSCCBCSS
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc--CcccccccceeEEE--cCCCcEEECcchhheeccC
Confidence            999965 6777766554 4589999999999999999999964  89999999999999  6788999999999976533


Q ss_pred             c----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCcc
Q psy11727        269 T----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKT  343 (437)
Q Consensus       269 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~  343 (437)
                      .    .....||..|+|||++.+..|+.++|||||||++|||+| |+.||.+.+..+....+......+.+..       
T Consensus       153 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~-------  225 (258)
T d1k2pa_         153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL-------  225 (258)
T ss_dssp             SSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTT-------
T ss_pred             CCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCccc-------
Confidence            2    223568899999999999999999999999999999998 8999999998888777754322211100       


Q ss_pred             chhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHH
Q psy11727        344 SKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTN  423 (437)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e  423 (437)
                                                                             ....+.+||.+||+.||.+|||+++
T Consensus       226 -------------------------------------------------------~~~~l~~li~~cl~~dP~~RPt~~e  250 (258)
T d1k2pa_         226 -------------------------------------------------------ASEKVYTIMYSCWHEKADERPTFKI  250 (258)
T ss_dssp             -------------------------------------------------------CCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             -------------------------------------------------------ccHHHHHHHHHHccCCHhHCcCHHH
Confidence                                                                   0025789999999999999999999


Q ss_pred             HhcC
Q psy11727        424 VLRH  427 (437)
Q Consensus       424 ~l~H  427 (437)
                      +++|
T Consensus       251 il~~  254 (258)
T d1k2pa_         251 LLSN  254 (258)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-50  Score=399.62  Aligned_cols=311  Identities=32%  Similarity=0.525  Sum_probs=242.1

Q ss_pred             eecCceec-cCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCC------CCCcEE
Q psy11727        102 IKHGEKFL-DRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADI------HSRYIV  174 (437)
Q Consensus       102 ~~~~~~~~-~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~------~h~~iv  174 (437)
                      +..|+.|. +||++++.||+|+||+||+|++..+|+.||||+++......+...+|+.+++.+.+.+.      .|+|||
T Consensus         4 ~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv   83 (362)
T d1q8ya_           4 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL   83 (362)
T ss_dssp             CCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred             CCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence            34577776 46999999999999999999999999999999998665556778889999999987654      478999


Q ss_pred             EecceeeE--CCEEEEEEEeccC--cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        175 KLKGHFTW--KNHLCLVFELLSY--NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       175 ~l~~~~~~--~~~~~lV~E~~~~--~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      ++++++..  ....+++|+++..  +............+++..++.++.||+.||+|||+. .||+||||||+|||+..+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~-~~IvHrDlKp~NIll~~~  162 (362)
T d1q8ya_          84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR-CGIIHTDIKPENVLMEIV  162 (362)
T ss_dssp             CCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT-TCEECSCCSGGGEEEEEE
T ss_pred             EEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh-cCcccccCChhHeeeecc
Confidence            99999864  4577777777643  455555555556799999999999999999999963 589999999999999543


Q ss_pred             CC----CCEEEEeCCCceecCCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC------HHH
Q psy11727        251 KR----SAIKIIDFGSSCHVGQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN------EVD  320 (437)
Q Consensus       251 ~~----~~ikL~DFG~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~------~~~  320 (437)
                      ..    ..++++|||.|..........+||+.|+|||++.+..|+.++|+||+||++++|++|++||...+      ..+
T Consensus       163 ~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~  242 (362)
T d1q8ya_         163 DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  242 (362)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             CcccccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhH
Confidence            32    23999999999988877778899999999999999999999999999999999999999997543      446


Q ss_pred             HHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhh
Q psy11727        321 QMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADY  400 (437)
Q Consensus       321 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (437)
                      .+..++..+|.++..++........+|+........          .......+...+.           .....+....
T Consensus       243 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----------~~~~~~~~~~  301 (362)
T d1q8ya_         243 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNI----------SKLKFWPLEDVLT-----------EKYKFSKDEA  301 (362)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSC----------CCCCBCCHHHHHH-----------HTTCCCHHHH
T ss_pred             HHHHHHHHhCCCCHHHhhcccccccccccchhhhcc----------ccccCCchhhhcc-----------cccccCcccC
Confidence            678888899999999988777766666543211100          0000001111111           0122344556


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCcCcCC
Q psy11727        401 MKFKDLILRMLTYDPKKRISPTNVLRHEFFLKHS  434 (437)
Q Consensus       401 ~~~~dli~~~L~~dP~~R~t~~e~l~Hp~~~~~~  434 (437)
                      ..++|||.+||++||.+|||++|||+||||++..
T Consensus       302 ~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         302 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence            6899999999999999999999999999999653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-51  Score=396.34  Aligned_cols=250  Identities=25%  Similarity=0.356  Sum_probs=201.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe-----EEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC-----QVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.++||+|+||+||+|++..+++     .||+|.+...  ......+.+|+.++..+.    .|||||+++++|.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~HpnIv~l~~~~~  111 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG----SHENIVNLLGACT  111 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc----CCCcEeEEEEEEe
Confidence            3689999999999999999999876543     6999998643  233456777888888774    6899999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC---------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN---------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCD  239 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~---------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrD  239 (437)
                      +.+.+++|||||++ +|.+++....                     ...+++..++.|+.||+.||+|||++  ||||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~--~IiHRD  189 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--SCVHRD  189 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT--TEEETT
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC--Ceeecc
Confidence            99999999999954 8999987643                     13489999999999999999999964  899999


Q ss_pred             CCCCcEEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q psy11727        240 LKPENILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLF  313 (437)
Q Consensus       240 iKp~NIll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf  313 (437)
                      |||+|||+  +.++.+||+|||+|+.....     ..+..||+.|+|||++.+..|+.++|||||||++|||+| |++||
T Consensus       190 lKp~Nill--~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf  267 (325)
T d1rjba_         190 LAARNVLV--THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  267 (325)
T ss_dssp             CSGGGEEE--ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             Cchhcccc--ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCC
Confidence            99999999  67889999999999765332     224567999999999999999999999999999999998 89999


Q ss_pred             CCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCC
Q psy11727        314 SGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEP  393 (437)
Q Consensus       314 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (437)
                      .+.+....+.+++..-..++.                                  |                        
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~----------------------------------p------------------------  289 (325)
T d1rjba_         268 PGIPVDANFYKLIQNGFKMDQ----------------------------------P------------------------  289 (325)
T ss_dssp             TTCCCSHHHHHHHHTTCCCCC----------------------------------C------------------------
T ss_pred             CCCCHHHHHHHHHhcCCCCCC----------------------------------C------------------------
Confidence            987766666665542111100                                  0                        


Q ss_pred             CCChhhhhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        394 GHSLADYMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       394 ~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      .   .....+.+||.+||+.||++|||++|+++|
T Consensus       290 ~---~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         290 F---YATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C---cCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0   001257999999999999999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.3e-51  Score=390.72  Aligned_cols=247  Identities=19%  Similarity=0.302  Sum_probs=192.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCe---EEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKC---QVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~---~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.++||+|+||+||+|.++.+++   .||||.+.....  ....+.+|+.++..+     .|||||++++++.+.
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~   99 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNVIHLEGVVTKS   99 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCCccEEEEEeeC
Confidence            4679999999999999999999877654   589998864322  234566777777665     799999999999999


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++|||||++ +|.+++.... ..+++..+..++.||+.||+|||++  |||||||||+||||  +.++.+||+|||+
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~--~iiHrDlKp~NILl--~~~~~~Kl~DFGl  174 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM--NYVHRDLAARNILV--NSNLVCKVSDFGL  174 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEECCC--
T ss_pred             CEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhC--CCccCccccceEEE--CCCCcEEECCccc
Confidence            999999999976 6877776543 4699999999999999999999964  89999999999999  7788999999999


Q ss_pred             ceecCCcc--------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        263 SCHVGQTL--------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       263 s~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      |+......        ....||+.|+|||++.+..|+.++|||||||++|||+| |++||.+.+..+.+..+......|+
T Consensus       175 a~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~  254 (299)
T d1jpaa_         175 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP  254 (299)
T ss_dssp             ---------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC
T ss_pred             ceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            97653321        12456889999999999999999999999999999998 8999999988877777654322221


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      ..                                                              .....+.+||.+||+.
T Consensus       255 ~~--------------------------------------------------------------~~~~~l~~li~~cl~~  272 (299)
T d1jpaa_         255 PM--------------------------------------------------------------DCPSALHQLMLDCWQK  272 (299)
T ss_dssp             CT--------------------------------------------------------------TCCHHHHHHHHHHTCS
T ss_pred             Cc--------------------------------------------------------------cchHHHHHHHHHHcCC
Confidence            10                                                              0012578999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy11727        414 DPKKRISPTNVLRH  427 (437)
Q Consensus       414 dP~~R~t~~e~l~H  427 (437)
                      ||.+|||+.|++++
T Consensus       273 ~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         273 DRNHRPKFGQIVNT  286 (299)
T ss_dssp             STTTSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999988764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-51  Score=386.89  Aligned_cols=248  Identities=26%  Similarity=0.333  Sum_probs=193.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc---ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK---PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .++|++.+.||+|+||+||+|+..   ..||||+++...   .....+.+|+.++..+     +|||||++++++. .+.
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~~~~~-~~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYST-APQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SSS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeEEEe-ccE
Confidence            467999999999999999999643   359999996432   2234566677777665     7999999999765 456


Q ss_pred             EEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCce
Q psy11727        186 LCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSC  264 (437)
Q Consensus       186 ~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~  264 (437)
                      ++||||||++ +|.+++.... ..+++..+..|+.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|+
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~--~ivHrDlKp~NiLl--~~~~~~Kl~DFGla~  152 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK--SIIHRDLKSNNIFL--HEDLTVKIGDFGLAT  152 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--ETTSSEEECCCCCSC
T ss_pred             EEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC--CEeccccCHHHEEE--cCCCCEEEcccccee
Confidence            8999999964 8999987654 4599999999999999999999964  89999999999999  668899999999997


Q ss_pred             ecCC-----ccccccccccccChhhhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        265 HVGQ-----TLYQYIQSRYYRSPEVLLGI---PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       265 ~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      ....     ...+..||+.|+|||++.+.   .|+.++|||||||++|||+||+.||.+.+....+..++.....+|...
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~  232 (276)
T d1uwha_         153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS  232 (276)
T ss_dssp             C------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGG
T ss_pred             eccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcch
Confidence            6532     22346789999999999753   589999999999999999999999998877666655554322222100


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                  ...                                             ......+.+||.+||+.||.
T Consensus       233 ------------~~~---------------------------------------------~~~~~~l~~li~~cl~~dp~  255 (276)
T d1uwha_         233 ------------KVR---------------------------------------------SNCPKAMKRLMAECLKKKRD  255 (276)
T ss_dssp             ------------GSC---------------------------------------------TTCCHHHHHHHHHHTCSSGG
T ss_pred             ------------hcc---------------------------------------------ccchHHHHHHHHHHcCCCHh
Confidence                        000                                             00012578999999999999


Q ss_pred             CCCCHHHHhcC
Q psy11727        417 KRISPTNVLRH  427 (437)
Q Consensus       417 ~R~t~~e~l~H  427 (437)
                      +|||++|+++|
T Consensus       256 ~RPt~~~il~~  266 (276)
T d1uwha_         256 ERPLFPQILAS  266 (276)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999976

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-51  Score=394.57  Aligned_cols=258  Identities=28%  Similarity=0.447  Sum_probs=208.7

Q ss_pred             ccCeeeeceecccCceEEEEEEE---cCCCeEEEEEEecCCc-----ccchHHHHHHHHHHHhhhcCCCCCcEEEeccee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFD---HEEKCQVAIKIIKNKK-----PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHF  180 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~---~~~~~~vaiK~i~~~~-----~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~  180 (437)
                      .++|++.+.||+|+||+||+|++   +.+|+.||||+++...     .....+.+|+.+++++.    +||||+++++++
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~----h~pnIv~~~~~~   98 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAF   98 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH----TCTTBCCEEEEE
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc----CCCeEEEeeeee
Confidence            47899999999999999999987   4478999999986432     23456778999999996    457999999999


Q ss_pred             eECCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEe
Q psy11727        181 TWKNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIID  259 (437)
Q Consensus       181 ~~~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~D  259 (437)
                      .+.+.+++||||+.+ +|.+++....  .+++..++.++.||+.||.|||+  .|||||||||+|||+  +.++.+||+|
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~--~~ivHrDiKp~Nill--~~~~~vkL~D  172 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK--LGIIYRDIKLENILL--DSNGHVVLTD  172 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCGGGEEE--CTTSCEEESC
T ss_pred             ccCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhc--CCEEeccCCccceee--cCCCCEEEee
Confidence            999999999999965 8999887764  47899999999999999999995  479999999999999  6788999999


Q ss_pred             CCCceecCCc----cccccccccccChhhhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy11727        260 FGSSCHVGQT----LYQYIQSRYYRSPEVLLGI--PYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEVLGMPP  333 (437)
Q Consensus       260 FG~s~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~p~  333 (437)
                      ||+|......    ..+..|++.|+|||.+.+.  .++.++|||||||+||+|++|++||.+.+..+....+......+.
T Consensus       173 FG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~  252 (322)
T d1vzoa_         173 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE  252 (322)
T ss_dssp             SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC
T ss_pred             ccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCC
Confidence            9999765332    3356789999999999765  467899999999999999999999988776655555544211000


Q ss_pred             hhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHcccc
Q psy11727        334 GYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTY  413 (437)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~  413 (437)
                      .                                ..|                           ......+.+||.+||++
T Consensus       253 ~--------------------------------~~~---------------------------~~~s~~~~~li~~~l~~  273 (322)
T d1vzoa_         253 P--------------------------------PYP---------------------------QEMSALAKDLIQRLLMK  273 (322)
T ss_dssp             C--------------------------------CCC---------------------------TTSCHHHHHHHHHHTCS
T ss_pred             C--------------------------------CCc---------------------------ccCCHHHHHHHHHHccc
Confidence            0                                000                           00012679999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCcCcCCC
Q psy11727        414 DPKKRI-----SPTNVLRHEFFLKHSV  435 (437)
Q Consensus       414 dP~~R~-----t~~e~l~Hp~~~~~~~  435 (437)
                      ||.+||     |++|+++||||++..+
T Consensus       274 dP~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         274 DPKKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             SGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             CHHHcCCCCcccHHHHHcCHhhcCCCH
Confidence            999999     5899999999998653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-50  Score=385.59  Aligned_cols=249  Identities=23%  Similarity=0.318  Sum_probs=200.9

Q ss_pred             cCeeeece-ecccCceEEEEEEEcC--CCeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC
Q psy11727        110 DRYEIDTL-LGKGSFGQVVKAFDHE--EKCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN  184 (437)
Q Consensus       110 ~~y~i~~~-lG~G~fg~V~~~~~~~--~~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~  184 (437)
                      ++|.+.+. ||+|+||+||+|.++.  ++..||||+++...  .....+.+|+.++..+     .|||||++++++.+ +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~g~~~~-~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQA-E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEES-S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-----CCCCEeeEeeeecc-C
Confidence            56888885 9999999999997754  45689999997432  2235677788888876     78999999999865 5


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCc
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSS  263 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s  263 (437)
                      .+|||||||++ +|.+++.... ..+++..+..++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~--~iiHrDlKp~Nill--~~~~~~Kl~DFGla  156 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK--NFVHRDLAARNVLL--VNRHYAKISDFGLS  156 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT--TEECCCCSGGGEEE--EETTEEEECCCTTC
T ss_pred             eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhC--CeecCcCchhheee--ccCCceeeccchhh
Confidence            68999999976 7888876543 4699999999999999999999964  89999999999999  56788999999999


Q ss_pred             eecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        264 CHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       264 ~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      +......      ....||+.|+|||++.+..++.++|||||||++|||+| |++||.+.+..+....+......+..  
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p--  234 (285)
T d1u59a_         157 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP--  234 (285)
T ss_dssp             EECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC--
T ss_pred             hcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC--
Confidence            8764321      23467899999999999899999999999999999998 99999998877777666442211100  


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                              +.    -...+.+||.+||+.||+
T Consensus       235 --------------------------------------------------------~~----~~~~l~~li~~cl~~~p~  254 (285)
T d1u59a_         235 --------------------------------------------------------PE----CPPELYALMSDCWIYKWE  254 (285)
T ss_dssp             --------------------------------------------------------TT----CCHHHHHHHHHTTCSSGG
T ss_pred             --------------------------------------------------------Cc----CCHHHHHHHHHHcCCCHh
Confidence                                                                    00    012578999999999999


Q ss_pred             CCCCHHHH---hcCCCcC
Q psy11727        417 KRISPTNV---LRHEFFL  431 (437)
Q Consensus       417 ~R~t~~e~---l~Hp~~~  431 (437)
                      +|||+.++   |+|+|+.
T Consensus       255 ~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         255 DRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHHHH
Confidence            99999887   6788873

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-50  Score=385.34  Aligned_cols=252  Identities=21%  Similarity=0.307  Sum_probs=203.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCL  188 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~l  188 (437)
                      .++|++.+.||+|+||+||+|++..+ ..||||+++......+.+.+|+.++..+     +|+|||++++++.+ +.+++
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~-~~~~l   88 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPIYI   88 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhc-----ccCCEeEEEEEEec-CCeEE
Confidence            46899999999999999999998765 5799999986665567788899998887     78999999999865 55789


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      ||||+.+ +|..++.......+++..++.++.||+.||+|||++  ||+||||||+||||  ++++.+||+|||+|+...
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~--~ivH~DlKp~NIll--~~~~~~kl~DfGla~~~~  164 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--NYVHRDLRAANILV--GENLVCKVADFGLARLIE  164 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CGGGCEEECCCCTTC---
T ss_pred             EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh--heecccccceEEEE--CCCCcEEEcccchhhhcc
Confidence            9999965 677777655445699999999999999999999964  89999999999999  678899999999997653


Q ss_pred             Cc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        268 QT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       268 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      ..    .....||+.|+|||++.+..++.++|||||||++|||++| .+||.+.+..+.+..+......|...       
T Consensus       165 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~-------  237 (285)
T d1fmka3         165 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP-------  237 (285)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT-------
T ss_pred             CCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCc-------
Confidence            22    2235689999999999999999999999999999999994 67777777777766664322111100       


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                             .....+.+||.+||+.||++|||++
T Consensus       238 -------------------------------------------------------~~~~~l~~li~~cl~~dP~~Rps~~  262 (285)
T d1fmka3         238 -------------------------------------------------------ECPESLHDLMCQCWRKEPEERPTFE  262 (285)
T ss_dssp             -------------------------------------------------------TSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             -------------------------------------------------------ccCHHHHHHHHHHcccCHhHCcCHH
Confidence                                                                   0012679999999999999999999


Q ss_pred             HHhc--CCCcCcC
Q psy11727        423 NVLR--HEFFLKH  433 (437)
Q Consensus       423 e~l~--Hp~~~~~  433 (437)
                      ++++  |+||+..
T Consensus       263 ~i~~~L~~~~~~~  275 (285)
T d1fmka3         263 YLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHHHHTTTSCS
T ss_pred             HHHHHHhhhhcCC
Confidence            9988  9999764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=382.08  Aligned_cols=242  Identities=24%  Similarity=0.350  Sum_probs=192.2

Q ss_pred             ceecccCceEEEEEEEc--CCCeEEEEEEecCCcc---cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEE
Q psy11727        116 TLLGKGSFGQVVKAFDH--EEKCQVAIKIIKNKKP---FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVF  190 (437)
Q Consensus       116 ~~lG~G~fg~V~~~~~~--~~~~~vaiK~i~~~~~---~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~  190 (437)
                      +.||+|+||+||+|...  .+++.||||+++....   ..+++.+|+.++..+     .|||||++++++.. +..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~g~~~~-~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEA-ESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEES-SSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-----CCCCCceEEEEecc-CCEEEEE
Confidence            47999999999999754  4567899999964322   234567788888766     79999999999865 4578999


Q ss_pred             EeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecCCc
Q psy11727        191 ELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVGQT  269 (437)
Q Consensus       191 E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~~~  269 (437)
                      ||+++ +|.+++...  ..+++..+..++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+|+.....
T Consensus        87 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~--~iiHrDlKp~Nill--~~~~~~kl~DFGla~~~~~~  160 (277)
T d1xbba_          87 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES--NFVHRDLAARNVLL--VTQHYAKISDFGLSKALRAD  160 (277)
T ss_dssp             ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--EETTEEEECCCTTCEECCTT
T ss_pred             EcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhC--CcccCCCcchhhcc--cccCcccccchhhhhhcccc
Confidence            99965 798888765  3599999999999999999999964  79999999999999  56788999999999765332


Q ss_pred             c------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCc
Q psy11727        270 L------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASK  342 (437)
Q Consensus       270 ~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  342 (437)
                      .      ....||+.|+|||++.+..++.++|||||||++|||+| |++||.+.+..+....+......+.+        
T Consensus       161 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p--------  232 (277)
T d1xbba_         161 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP--------  232 (277)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC--------
T ss_pred             ccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence            1      23468899999999999999999999999999999998 89999998887766665432111100        


Q ss_pred             cchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHH
Q psy11727        343 TSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPT  422 (437)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~  422 (437)
                                                                        ..    -...+.+||.+||+.||.+|||+.
T Consensus       233 --------------------------------------------------~~----~~~~~~~li~~cl~~dp~~RPs~~  258 (277)
T d1xbba_         233 --------------------------------------------------AG----CPREMYDLMNLCWTYDVENRPGFA  258 (277)
T ss_dssp             --------------------------------------------------TT----CCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             --------------------------------------------------cc----cCHHHHHHHHHHcCCCHhHCcCHH
Confidence                                                              00    012578999999999999999999


Q ss_pred             HH---hcCCCcC
Q psy11727        423 NV---LRHEFFL  431 (437)
Q Consensus       423 e~---l~Hp~~~  431 (437)
                      ++   |+|+|+.
T Consensus       259 ~i~~~L~~~~~~  270 (277)
T d1xbba_         259 AVELRLRNYYYD  270 (277)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHhhCHHhh
Confidence            98   5676653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-49  Score=374.80  Aligned_cols=246  Identities=19%  Similarity=0.265  Sum_probs=191.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC----eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK----CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~----~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      .+.|++.++||+|+||+||+|....++    ..||||++.....  ...++.+|+.++..+     .|||||++++++.+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~H~nIv~~~g~~~~   80 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGVISK   80 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-----CCCCEeeeeEEEec
Confidence            457999999999999999999877654    4799999964322  223456778777766     78999999999999


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                      .+..++||||+.+ ++.+.+.... ..+++..+..++.||+.||+|||++  +|+||||||+||||  +.++.+||+|||
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~--~iiHrDlKp~NILl--~~~~~~Kl~DFG  155 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM--NYVHRDLAARNILV--NSNLVCKVSDFG  155 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--CTTCCEEECCCC
T ss_pred             CCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhcccc--ccccCccccceEEE--CCCCeEEEcccc
Confidence            9999999999976 5666665543 5699999999999999999999964  79999999999999  778899999999


Q ss_pred             CceecCCc------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQT------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      +|+.....      .....||+.|+|||++.+..++.++|||||||++|||++| .+||.+.+..+.+..+.+....+..
T Consensus       156 la~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~  235 (283)
T d1mqba_         156 LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP  235 (283)
T ss_dssp             C-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred             hhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCc
Confidence            99765322      1234578999999999999999999999999999999995 5667777766666555432211110


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                      .                                                              .....+.+||.+||+.|
T Consensus       236 ~--------------------------------------------------------------~~~~~l~~li~~cl~~~  253 (283)
T d1mqba_         236 M--------------------------------------------------------------DCPSAIYQLMMQCWQQE  253 (283)
T ss_dssp             T--------------------------------------------------------------TCBHHHHHHHHHHTCSS
T ss_pred             h--------------------------------------------------------------hhHHHHHHHHHHHCcCC
Confidence            0                                                              00125789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.|+++
T Consensus       254 p~~RPt~~eil~  265 (283)
T d1mqba_         254 RARRPKFADIVS  265 (283)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-49  Score=382.93  Aligned_cols=245  Identities=19%  Similarity=0.270  Sum_probs=194.6

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCe----EEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKC----QVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~----~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      ++|++.++||+|+||+||+|.+..+|+    .||+|.++..  ......+.+|+.++..+     +|||||+++++|.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-----CCTTBCCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEecC
Confidence            469999999999999999999988776    5888888633  23345678899998887     789999999999876


Q ss_pred             CEEEEEEEec-cCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELL-SYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~-~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      + .+++||++ +++|.+.+.... ..+++..++.++.||+.||+|||++  |||||||||+|||+  +.++.+||+|||+
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~--~iiHrDlKp~NIll--~~~~~~kl~DFGl  157 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR--RLVHRDLAARNVLV--KTPQHVKITDFGL  157 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGEEE--EETTEEEECCCSH
T ss_pred             C-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHc--CcccCcchhhccee--CCCCCeEeecccc
Confidence            5 45666666 568988877654 5699999999999999999999965  79999999999999  5678899999999


Q ss_pred             ceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhh
Q psy11727        263 SCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYL  336 (437)
Q Consensus       263 s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  336 (437)
                      |+.....     .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||.+.+..+....+......+... 
T Consensus       158 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~-  236 (317)
T d1xkka_         158 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP-  236 (317)
T ss_dssp             HHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCT-
T ss_pred             ceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc-
Confidence            9765332     223467999999999999999999999999999999999 899999888776666554432211100 


Q ss_pred             hccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCC
Q psy11727        337 LHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPK  416 (437)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~  416 (437)
                                                                                   .....+.+||.+||+.||.
T Consensus       237 -------------------------------------------------------------~~~~~~~~li~~cl~~dP~  255 (317)
T d1xkka_         237 -------------------------------------------------------------ICTIDVYMIMVKCWMIDAD  255 (317)
T ss_dssp             -------------------------------------------------------------TBCHHHHHHHHHHTCSSGG
T ss_pred             -------------------------------------------------------------ccCHHHHHHHHHhCCCChh
Confidence                                                                         0012578999999999999


Q ss_pred             CCCCHHHHhcC
Q psy11727        417 KRISPTNVLRH  427 (437)
Q Consensus       417 ~R~t~~e~l~H  427 (437)
                      +|||+.|+++|
T Consensus       256 ~RPs~~eil~~  266 (317)
T d1xkka_         256 SRPKFRELIIE  266 (317)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-48  Score=374.46  Aligned_cols=258  Identities=23%  Similarity=0.285  Sum_probs=203.1

Q ss_pred             eccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        108 FLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       108 ~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++... ....++..|+.+++.+.    +|++|+.+.+++.+.+..+
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~E~~i~~~l~----~~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQ----GGVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESC-TTSCCHHHHHHHHHHST----TSTTCCCEEEEEEETTEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchh-ccCHHHHHHHHHHHHcc----CCCcccEEEEEEecCCEEE
Confidence            346899999999999999999999999999999998754 33456788999998875    3456777788888999999


Q ss_pred             EEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEec-CCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCS-PKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~-~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++++.+.+.... ..+++..+..++.|++.||+|||++  |||||||||+|||++. +.+..+||+|||+|+..
T Consensus        80 ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~  156 (299)
T d1ckia_          80 MVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK--NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  156 (299)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred             EEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHC--CeeeccCCHhhccccccCCCceeeeeccCcceec
Confidence            999999999888776544 5699999999999999999999964  8999999999999853 23557999999999875


Q ss_pred             CCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH----hCCC
Q psy11727        267 GQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKNEVDQMTKIIEV----LGMP  332 (437)
Q Consensus       267 ~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~~~~~~~~i~~~----~~~p  332 (437)
                      ...          ....+||+.|+|||++.+..++.++|||||||++|||+||++||.+.........+...    ...|
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ckia_         157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  236 (299)
T ss_dssp             BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC
T ss_pred             cccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC
Confidence            321          23457999999999999999999999999999999999999999887655444333221    1111


Q ss_pred             ChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccc
Q psy11727        333 PGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLT  412 (437)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~  412 (437)
                      +....+..                                                           ...+.+||.+||+
T Consensus       237 ~~~~~~~~-----------------------------------------------------------p~~~~~li~~cl~  257 (299)
T d1ckia_         237 IEVLCKGY-----------------------------------------------------------PSEFATYLNFCRS  257 (299)
T ss_dssp             HHHHTTTS-----------------------------------------------------------CHHHHHHHHHHHH
T ss_pred             hhHhccCC-----------------------------------------------------------CHHHHHHHHHHcc
Confidence            11111100                                                           0157899999999


Q ss_pred             cCCCCCCCHH---HHhcCCCcCc
Q psy11727        413 YDPKKRISPT---NVLRHEFFLK  432 (437)
Q Consensus       413 ~dP~~R~t~~---e~l~Hp~~~~  432 (437)
                      .||.+|||++   ++|+|+|.++
T Consensus       258 ~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         258 LRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             SCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHHHHHc
Confidence            9999999976   5578887654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-50  Score=375.01  Aligned_cols=245  Identities=22%  Similarity=0.311  Sum_probs=192.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-CCEEE
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-KNHLC  187 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-~~~~~  187 (437)
                      .++|++.+.||+|+||.||+|..  +|..||||+++. ....+.+.+|+.+++.+     +|||||++++++.+ .+.++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~-~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~~   77 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLY   77 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCC-CC--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--CCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECc-HHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEecCCcEE
Confidence            46799999999999999999987  477899999974 34456778888887765     79999999998854 46789


Q ss_pred             EEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceec
Q psy11727        188 LVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHV  266 (437)
Q Consensus       188 lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~  266 (437)
                      +||||+++ +|.+++.......+++..++.++.||+.||+|||++  +||||||||+|||+  +.++.+||+|||++...
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~--~ivH~dlkp~Nil~--~~~~~~kl~dfg~s~~~  153 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFVHRDLAARNVLV--SEDNVAKVSDFGLTKEA  153 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CTTSCEEECCCCC----
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC--ceeccccchHhhee--cCCCCEeecccccceec
Confidence            99999965 899998765444589999999999999999999964  89999999999999  77889999999999887


Q ss_pred             CCccccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhhccCCccch
Q psy11727        267 GQTLYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSK  345 (437)
Q Consensus       267 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~  345 (437)
                      ........++..|+|||++.+..++.++|||||||++|||+| |++||.+.+..+....+......+.            
T Consensus       154 ~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~------------  221 (262)
T d1byga_         154 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA------------  221 (262)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCC------------
T ss_pred             CCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC------------
Confidence            776667788999999999999999999999999999999998 7999998877766666532111000            


Q ss_pred             hhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCCCHHHHh
Q psy11727        346 YFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRISPTNVL  425 (437)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l  425 (437)
                                             |                           ......+.+||++||+.||.+|||+.+++
T Consensus       222 -----------------------~---------------------------~~~~~~~~~li~~cl~~dP~~Rps~~~l~  251 (262)
T d1byga_         222 -----------------------P---------------------------DGCPPAVYEVMKNCWHLDAAMRPSFLQLR  251 (262)
T ss_dssp             -----------------------C---------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -----------------------C---------------------------ccCCHHHHHHHHHHcccCHhHCcCHHHHH
Confidence                                   0                           00012578999999999999999999998


Q ss_pred             cC
Q psy11727        426 RH  427 (437)
Q Consensus       426 ~H  427 (437)
                      ++
T Consensus       252 ~~  253 (262)
T d1byga_         252 EQ  253 (262)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-49  Score=375.49  Aligned_cols=246  Identities=25%  Similarity=0.355  Sum_probs=190.4

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCC---CeEEEEEEecCCc--ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeEC
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEE---KCQVAIKIIKNKK--PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWK  183 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~---~~~vaiK~i~~~~--~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~  183 (437)
                      .++|++.+.||+|+||+||+|++..+   +..||||.++...  .....+.+|+.++..+     .|||||++++++. .
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~-~   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT-E   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC-S
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEe-c
Confidence            46899999999999999999988654   4568999986432  2234466677777665     7999999999986 4


Q ss_pred             CEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCC
Q psy11727        184 NHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGS  262 (437)
Q Consensus       184 ~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~  262 (437)
                      +.+++||||+++ +|.+++.... ..+++..++.++.||+.||+|||++  |||||||||+||++  +.++.+||+|||+
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~--~iiHrDlKp~NIll--~~~~~~Kl~DfG~  154 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLV--SSNDCVKLGDFGL  154 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--EETTEEEECC---
T ss_pred             CeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhccc--Ceeccccchhheee--cCCCcEEEccchh
Confidence            678999999976 6777766543 5699999999999999999999964  79999999999999  5678899999999


Q ss_pred             ceecCCc----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhh
Q psy11727        263 SCHVGQT----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPGYLL  337 (437)
Q Consensus       263 s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  337 (437)
                      |+.....    .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||.+.+..+.+..+......+..   
T Consensus       155 a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~---  231 (273)
T d1mp8a_         155 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP---  231 (273)
T ss_dssp             ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---
T ss_pred             heeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---
Confidence            9765432    234567899999999999999999999999999999998 89999998888777776542211100   


Q ss_pred             ccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCC
Q psy11727        338 HGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKK  417 (437)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~  417 (437)
                                                                             +    .-...+.+||.+||+.||.+
T Consensus       232 -------------------------------------------------------~----~~~~~~~~li~~cl~~dp~~  252 (273)
T d1mp8a_         232 -------------------------------------------------------P----NCPPTLYSLMTKCWAYDPSR  252 (273)
T ss_dssp             -------------------------------------------------------T----TCCHHHHHHHHHHTCSSGGG
T ss_pred             -------------------------------------------------------C----CCCHHHHHHHHHHcCCCHhH
Confidence                                                                   0    00125799999999999999


Q ss_pred             CCCHHHHhcC
Q psy11727        418 RISPTNVLRH  427 (437)
Q Consensus       418 R~t~~e~l~H  427 (437)
                      |||++|+++|
T Consensus       253 Rps~~ei~~~  262 (273)
T d1mp8a_         253 RPRFTELKAQ  262 (273)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=373.66  Aligned_cols=250  Identities=24%  Similarity=0.345  Sum_probs=188.0

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|.+..     +++.||||+++....  ....+..|..++..+.    +|+|||.+++++.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~----~h~~iv~~~~~~~   87 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT   87 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc----CCCeEEEeeeeec
Confidence            3689999999999999999998754     457899999864321  2234445556655553    6889999999876


Q ss_pred             EC-CEEEEEEEecc-CcHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcE
Q psy11727        182 WK-NHLCLVFELLS-YNLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENI  245 (437)
Q Consensus       182 ~~-~~~~lV~E~~~-~~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NI  245 (437)
                      .. +.+++|||||+ |+|.+++....              ...+++..+..++.||+.||+|||++  |||||||||+||
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~--~ivHrDlKp~NI  165 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCIHRDLAARNI  165 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCCGGGE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC--CCcCCcCCccce
Confidence            54 57899999996 58999886532              23489999999999999999999964  799999999999


Q ss_pred             EEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHH
Q psy11727        246 LLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEV  319 (437)
Q Consensus       246 ll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~  319 (437)
                      |+  ++++.+||+|||+|+.....     .....||+.|+|||++.+..++.++|||||||++|||+|| .+||.+.+..
T Consensus       166 Ll--~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         166 LL--SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             EE--CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             eE--CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence            99  67889999999999755322     2345789999999999999999999999999999999996 5789887655


Q ss_pred             HHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhh
Q psy11727        320 DQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLAD  399 (437)
Q Consensus       320 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (437)
                      +.+..++..-..++.                                  |                           ...
T Consensus       244 ~~~~~~~~~~~~~~~----------------------------------~---------------------------~~~  262 (299)
T d1ywna1         244 EEFCRRLKEGTRMRA----------------------------------P---------------------------DYT  262 (299)
T ss_dssp             HHHHHHHHHTCCCCC----------------------------------C---------------------------TTC
T ss_pred             HHHHHHHhcCCCCCC----------------------------------C---------------------------ccC
Confidence            555444332111100                                  0                           000


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcC
Q psy11727        400 YMKFKDLILRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       400 ~~~~~dli~~~L~~dP~~R~t~~e~l~H  427 (437)
                      ...+.+||.+||+.||.+|||++|+++|
T Consensus       263 ~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         263 TPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            1257899999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-48  Score=371.19  Aligned_cols=248  Identities=24%  Similarity=0.322  Sum_probs=196.2

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCC-------eEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecce
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEK-------CQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGH  179 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~-------~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~  179 (437)
                      .++|++.+.||+|+||+||+|+...++       ..||||+++....  ....+..|...+..+.    .|||||+++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~----~HpnIv~~~~~   87 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLLGA   87 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc----CCCeEEecccc
Confidence            478999999999999999999876554       4799999964432  2344555666666663    79999999999


Q ss_pred             eeECCEEEEEEEecc-CcHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        180 FTWKNHLCLVFELLS-YNLYNLIRNTN--------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       180 ~~~~~~~~lV~E~~~-~~L~~~l~~~~--------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      |.+++..++||||+. |+|.+++....              ...+++..++.++.||+.||+|||++  |||||||||+|
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~--~ivHrDiKp~N  165 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCIHRDLAARN  165 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGG
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC--CEEeeeecccc
Confidence            999999999999995 58999987543              23589999999999999999999965  79999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||++......     .....+|+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.+.
T Consensus       166 iLl--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~  243 (299)
T d1fgka_         166 VLV--TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  243 (299)
T ss_dssp             EEE--CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             eee--cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH
Confidence            999  77889999999999766332     233578899999999999999999999999999999998 7999998888


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      ......+......+..                                                          ..    
T Consensus       244 ~~~~~~i~~~~~~~~p----------------------------------------------------------~~----  261 (299)
T d1fgka_         244 EELFKLLKEGHRMDKP----------------------------------------------------------SN----  261 (299)
T ss_dssp             HHHHHHHHTTCCCCCC----------------------------------------------------------SS----
T ss_pred             HHHHHHHHcCCCCCCC----------------------------------------------------------cc----
Confidence            7666655432111100                                                          00    


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      ....+.+||.+||+.||.+|||+.|+++
T Consensus       262 ~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         262 CTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            0015789999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.2e-46  Score=359.88  Aligned_cols=203  Identities=22%  Similarity=0.244  Sum_probs=175.7

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++... .....+..|...+..+.    +|+|++.+++++....+.
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~-~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~~   76 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLA----GCTGIPNVYYFGQEGLHN   76 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTT----TCTTCCCEEEEEEETTEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc-cCcHHHHHHHHHHHHhc----CCCCCCEEEEEeecCCcc
Confidence            3457899999999999999999999999999999998643 33456777888888885    457889999999999999


Q ss_pred             EEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC---CCCCEEEEeCCCc
Q psy11727        187 CLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP---KRSAIKIIDFGSS  263 (437)
Q Consensus       187 ~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~---~~~~ikL~DFG~s  263 (437)
                      ++||||++++|.+++.... ..+++..+..++.|++.||+|||+  .|||||||||+|||++.+   ..+.+||+|||+|
T Consensus        77 ~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~--~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          77 VLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT--TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             EEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHH--CCceeccCCccceeecCcccccCCceEEccccee
Confidence            9999999999999887654 469999999999999999999996  489999999999999532   3567999999999


Q ss_pred             eecCCc----------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q psy11727        264 CHVGQT----------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSGKN  317 (437)
Q Consensus       264 ~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~~~  317 (437)
                      +.....          ....+||+.|+|||++.+..++.++|||||||++|||+||.+||.+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~  217 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  217 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             EEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCcc
Confidence            765321          234579999999999999999999999999999999999999998654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-48  Score=372.41  Aligned_cols=248  Identities=25%  Similarity=0.291  Sum_probs=200.3

Q ss_pred             cCeeeeceecccCceEEEEEEEcCCCeE--EEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHEEKCQ--VAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~~~~~--vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      ++|++.++||+|+||+||+|+++.++..  ||||.++..  ......+.+|+.++..+.    +|||||++++++.+.+.
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----~HpnIv~~~~~~~~~~~   85 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGY   85 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC----CCTTBCCEEEEEEETTE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc----CCCCEeeEEEEEecCCe
Confidence            6899999999999999999999888874  677877532  223456778888887763    68999999999999999


Q ss_pred             EEEEEEecc-CcHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecC
Q psy11727        186 LCLVFELLS-YNLYNLIRNT--------------NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSP  250 (437)
Q Consensus       186 ~~lV~E~~~-~~L~~~l~~~--------------~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~  250 (437)
                      +++||||++ |+|.+++...              ....+++..+..++.||+.||.|||++  |||||||||+|||+  +
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~--~iiHrDlkp~NIL~--~  161 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--QFIHRDLAARNILV--G  161 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCSGGGEEE--C
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC--CccccccccceEEE--c
Confidence            999999996 5899988643              235699999999999999999999964  89999999999999  6


Q ss_pred             CCCCEEEEeCCCceecCCcc--ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHH
Q psy11727        251 KRSAIKIIDFGSSCHVGQTL--YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKIIE  327 (437)
Q Consensus       251 ~~~~ikL~DFG~s~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~~  327 (437)
                      .++.+||+|||+|.......  ....||..|+|||.+.+..|+.++|||||||++|||++| .+||.+.+..+.+..+.+
T Consensus       162 ~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~  241 (309)
T d1fvra_         162 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  241 (309)
T ss_dssp             GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             CCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            78899999999997654332  245689999999999999999999999999999999996 578998888777666543


Q ss_pred             HhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHH
Q psy11727        328 VLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLI  407 (437)
Q Consensus       328 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  407 (437)
                      ....+..                                     .                         .....+.+||
T Consensus       242 ~~~~~~~-------------------------------------~-------------------------~~~~~~~~li  259 (309)
T d1fvra_         242 GYRLEKP-------------------------------------L-------------------------NCDDEVYDLM  259 (309)
T ss_dssp             TCCCCCC-------------------------------------T-------------------------TBCHHHHHHH
T ss_pred             cCCCCCC-------------------------------------c-------------------------cCCHHHHHHH
Confidence            2111100                                     0                         0012679999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q psy11727        408 LRMLTYDPKKRISPTNVLRH  427 (437)
Q Consensus       408 ~~~L~~dP~~R~t~~e~l~H  427 (437)
                      .+||+.||++|||++|+++|
T Consensus       260 ~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         260 RQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999976

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9e-48  Score=369.27  Aligned_cols=247  Identities=23%  Similarity=0.303  Sum_probs=200.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|+.+     .+++.||||+++....  ...++.+|+.++..+     .||||+++++++.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLLGVCA   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-----CCCCcccceeeec
Confidence            568999999999999999999875     3567899999964322  234567788887766     7899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNTN----------------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHC  238 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~~----------------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHr  238 (437)
                      ..+..++|||+++ |+|.+++....                      ...+++..+..|+.||+.||+|||++  +||||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~--~ivHr  164 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--KFVHR  164 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCS
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC--CeEee
Confidence            9999999999996 58999886432                      23478999999999999999999964  79999


Q ss_pred             CCCCCcEEEecCCCCCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCC-CC
Q psy11727        239 DLKPENILLCSPKRSAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGE-PL  312 (437)
Q Consensus       239 DiKp~NIll~~~~~~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~-~p  312 (437)
                      ||||+|||+  +.++.+||+|||+|......     ..+..|++.|+|||++.+..|+.++|||||||++|||++|. +|
T Consensus       165 DlKp~NILl--d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         165 DLATRNCLV--GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             CCSGGGEEE--CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             EEcccceEE--CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence            999999999  67889999999999754322     23456788999999999999999999999999999999985 88


Q ss_pred             CCCCCHHHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCC
Q psy11727        313 FSGKNEVDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNE  392 (437)
Q Consensus       313 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (437)
                      |.+.+..+.+..+.+....+..                                                          
T Consensus       243 ~~~~~~~e~~~~v~~~~~~~~p----------------------------------------------------------  264 (301)
T d1lufa_         243 YYGMAHEEVIYYVRDGNILACP----------------------------------------------------------  264 (301)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCC----------------------------------------------------------
T ss_pred             CCCCCHHHHHHHHHcCCCCCCC----------------------------------------------------------
Confidence            9999888887776542211100                                                          


Q ss_pred             CCCChhhhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        393 PGHSLADYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       393 ~~~~~~~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                          ......+.+||.+||+.||.+|||+.|+++
T Consensus       265 ----~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         265 ----ENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             ----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----ccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                000015789999999999999999999964

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-48  Score=363.98  Aligned_cols=245  Identities=24%  Similarity=0.312  Sum_probs=189.1

Q ss_pred             cCeeeeceecccCceEEEEEEEcC-C--CeEEEEEEecCC----cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE
Q psy11727        110 DRYEIDTLLGKGSFGQVVKAFDHE-E--KCQVAIKIIKNK----KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW  182 (437)
Q Consensus       110 ~~y~i~~~lG~G~fg~V~~~~~~~-~--~~~vaiK~i~~~----~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~  182 (437)
                      ++|++.+.||+|+||+||+|+... +  ...||||+++..    ....+.+.+|+.++..+     +|||||+++++|.+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-----~H~nIv~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEee
Confidence            579999999999999999998643 3  246899998643    22345667888888877     78999999999975


Q ss_pred             CCEEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCC
Q psy11727        183 KNHLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFG  261 (437)
Q Consensus       183 ~~~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG  261 (437)
                       +.+++||||+.+ ++.+.+.... ..+++..+..++.||+.||.|||++  ||+||||||+|||+  +.++.+||+|||
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~--~iiHrDikp~NIll--~~~~~vkl~DfG  156 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK--RFIHRDLAARNLLL--ATRDLVKIGDFG  156 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT--TEECSCCCGGGEEE--EETTEEEECCCT
T ss_pred             -cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC--CEeeeeecHHHhcc--ccccceeeccch
Confidence             467899999964 7888776543 4599999999999999999999964  79999999999999  557789999999


Q ss_pred             CceecCCcc------ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCh
Q psy11727        262 SSCHVGQTL------YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNEVDQMTKIIEVLGMPPG  334 (437)
Q Consensus       262 ~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~p~~  334 (437)
                      ++.......      ....|+..|+|||++.+..++.++|||||||++|||+| |++||.+.+..+.+..+......++.
T Consensus       157 l~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~  236 (273)
T d1u46a_         157 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR  236 (273)
T ss_dssp             TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC
T ss_pred             hhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC
Confidence            998764332      23456788999999999999999999999999999998 89999999998887776542111100


Q ss_pred             hhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccC
Q psy11727        335 YLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYD  414 (437)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~d  414 (437)
                                                          ..                     ..    ...+.+||.+||+.|
T Consensus       237 ------------------------------------~~---------------------~~----~~~l~~li~~cl~~d  255 (273)
T d1u46a_         237 ------------------------------------PE---------------------DC----PQDIYNVMVQCWAHK  255 (273)
T ss_dssp             ------------------------------------CT---------------------TC----CHHHHHHHHHHTCSS
T ss_pred             ------------------------------------cc---------------------cc----cHHHHHHHHHHcCCC
Confidence                                                00                     00    015789999999999


Q ss_pred             CCCCCCHHHHhc
Q psy11727        415 PKKRISPTNVLR  426 (437)
Q Consensus       415 P~~R~t~~e~l~  426 (437)
                      |.+|||+.|+++
T Consensus       256 p~~RPt~~ei~~  267 (273)
T d1u46a_         256 PEDRPTFVALRD  267 (273)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-47  Score=364.42  Aligned_cols=254  Identities=22%  Similarity=0.294  Sum_probs=204.8

Q ss_pred             ccCeeeeceecccCceEEEEEEEcC-----CCeEEEEEEecCCccc--chHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHE-----EKCQVAIKIIKNKKPF--LNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~-----~~~~vaiK~i~~~~~~--~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||+||+|.+..     ++..||||+++.....  ...+.+|+.++..+     .|||||++++++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~~~~   93 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLGVVS   93 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-----CCCCEeeeeeEEe
Confidence            5789999999999999999998753     4578999999743221  12345566665554     7899999999999


Q ss_pred             ECCEEEEEEEecc-CcHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC
Q psy11727        182 WKNHLCLVFELLS-YNLYNLIRNT--------NFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       182 ~~~~~~lV~E~~~-~~L~~~l~~~--------~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~  252 (437)
                      ..+..++||||+. |+|.+++...        ....+++..+..++.|++.||.|||++  +|+||||||+|||+  +++
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~--~ivHrDlk~~NiLl--d~~  169 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--KFVHRDLAARNCMV--AED  169 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT--TCBCSCCSGGGEEE--CTT
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC--CeeeceEcCCceee--cCC
Confidence            9999999999995 5788877532        123478999999999999999999965  79999999999999  788


Q ss_pred             CCEEEEeCCCceecCCc-----cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHH
Q psy11727        253 SAIKIIDFGSSCHVGQT-----LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTG-EPLFSGKNEVDQMTKII  326 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~pf~~~~~~~~~~~i~  326 (437)
                      +.+||+|||+|......     .....||+.|+|||.+.+..++.++|||||||++|||+|| .+||.+.+..+.+..+.
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            89999999999765332     2234678999999999999999999999999999999998 59999998888887775


Q ss_pred             HHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHH
Q psy11727        327 EVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDL  406 (437)
Q Consensus       327 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  406 (437)
                      +....+...                                                              .....+.+|
T Consensus       250 ~~~~~~~p~--------------------------------------------------------------~~~~~l~~l  267 (308)
T d1p4oa_         250 EGGLLDKPD--------------------------------------------------------------NCPDMLFEL  267 (308)
T ss_dssp             TTCCCCCCT--------------------------------------------------------------TCCHHHHHH
T ss_pred             hCCCCCCcc--------------------------------------------------------------cchHHHHHH
Confidence            422111000                                                              000257999


Q ss_pred             HHHccccCCCCCCCHHHHhc------CCCcCcC
Q psy11727        407 ILRMLTYDPKKRISPTNVLR------HEFFLKH  433 (437)
Q Consensus       407 i~~~L~~dP~~R~t~~e~l~------Hp~~~~~  433 (437)
                      |.+||+.||.+|||++|+++      +|+|++.
T Consensus       268 i~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~  300 (308)
T d1p4oa_         268 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV  300 (308)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHhcCCCCcCC
Confidence            99999999999999999997      8998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=363.21  Aligned_cols=249  Identities=26%  Similarity=0.359  Sum_probs=201.9

Q ss_pred             ccCeeeeceecccCceEEEEEEEc-----CCCeEEEEEEecCCcc--cchHHHHHHHHHHHhhhcCCCCCcEEEecceee
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDH-----EEKCQVAIKIIKNKKP--FLNQAQIEVQLLEKINKADIHSRYIVKLKGHFT  181 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~-----~~~~~vaiK~i~~~~~--~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~  181 (437)
                      .++|++.+.||+|+||.||+|+..     .+++.||||+++....  ....+.+|+.++..+.    +|||||++++++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~----~HpnIv~~~g~~~   97 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHMNIVNLLGACT   97 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc----CCCCEEEEEEEEe
Confidence            478999999999999999999863     4678999999974332  2334667888888773    6999999999999


Q ss_pred             ECCEEEEEEEeccC-cHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCc
Q psy11727        182 WKNHLCLVFELLSY-NLYNLIRNTN----------------FHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPEN  244 (437)
Q Consensus       182 ~~~~~~lV~E~~~~-~L~~~l~~~~----------------~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~N  244 (437)
                      +.+.+++|||||++ +|.+++....                ...+++..+..++.||+.||+|||++  |||||||||+|
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~--~ivHrDLKp~N  175 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK--NCIHRDLAARN  175 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGG
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--Ceeeccccccc
Confidence            99999999999965 7888886532                23589999999999999999999965  79999999999


Q ss_pred             EEEecCCCCCEEEEeCCCceecCCcc-----ccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCH
Q psy11727        245 ILLCSPKRSAIKIIDFGSSCHVGQTL-----YQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHT-GEPLFSGKNE  318 (437)
Q Consensus       245 Ill~~~~~~~ikL~DFG~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~pf~~~~~  318 (437)
                      ||+  +.++.+||+|||.++......     ....||+.|+|||++.+..++.++|||||||++|||+| |.+||.+.+.
T Consensus       176 Il~--~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~  253 (311)
T d1t46a_         176 ILL--THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (311)
T ss_dssp             EEE--ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             ccc--cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH
Confidence            999  667889999999998664322     23577999999999999999999999999999999998 7788888777


Q ss_pred             HHHHHHHHHHhCCCChhhhccCCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChh
Q psy11727        319 VDQMTKIIEVLGMPPGYLLHGASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLA  398 (437)
Q Consensus       319 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (437)
                      .+.+.+++..-..++.                                                          +.   .
T Consensus       254 ~~~~~~~i~~~~~~~~----------------------------------------------------------~~---~  272 (311)
T d1t46a_         254 DSKFYKMIKEGFRMLS----------------------------------------------------------PE---H  272 (311)
T ss_dssp             SHHHHHHHHHTCCCCC----------------------------------------------------------CT---T
T ss_pred             HHHHHHHHhcCCCCCC----------------------------------------------------------cc---c
Confidence            6666666543111110                                                          00   0


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhc
Q psy11727        399 DYMKFKDLILRMLTYDPKKRISPTNVLR  426 (437)
Q Consensus       399 ~~~~~~dli~~~L~~dP~~R~t~~e~l~  426 (437)
                      ....+.+||.+||++||.+|||+.|+++
T Consensus       273 ~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         273 APAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            0125789999999999999999999985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=361.89  Aligned_cols=196  Identities=22%  Similarity=0.257  Sum_probs=159.6

Q ss_pred             ccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECC----
Q psy11727        109 LDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKN----  184 (437)
Q Consensus       109 ~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~----  184 (437)
                      ..+|.+.+.||+|+||+||+|+.  +|+.||||+++...  ......|..   .+....++|||||++++++.+.+    
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~~e~e---i~~~~~~~HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAE---IYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHH---HHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhHHHHHHH---HHHHhhCCCCcCcceEEEEEeCCCcce
Confidence            46799999999999999999975  68899999996432  233333433   23334568999999999998754    


Q ss_pred             EEEEEEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCcEEEecCCCCCEEE
Q psy11727        185 HLCLVFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSP------ELSIIHCDLKPENILLCSPKRSAIKI  257 (437)
Q Consensus       185 ~~~lV~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~------~~giiHrDiKp~NIll~~~~~~~ikL  257 (437)
                      .+|+||||+.+ +|.+++...   ++++..+..++.|++.||+|||+.      +.|||||||||+||||  +.++.+||
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl--~~~~~~Kl  149 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTCCI  149 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE--CTTSCEEE
T ss_pred             EEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE--cCCCCeEE
Confidence            78999999955 899999764   489999999999999999999973      3589999999999999  77899999


Q ss_pred             EeCCCceecCC-------ccccccccccccChhhhcCCC------CCCcchHHHHHHHHHHHHhCCCCCCCC
Q psy11727        258 IDFGSSCHVGQ-------TLYQYIQSRYYRSPEVLLGIP------YDLAIDMWSLGCILVELHTGEPLFSGK  316 (437)
Q Consensus       258 ~DFG~s~~~~~-------~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltg~~pf~~~  316 (437)
                      +|||++.....       ......||+.|+|||++.+..      ++.++|||||||++|||+||.+||...
T Consensus       150 ~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~  221 (303)
T d1vjya_         150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             CCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             EecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcc
Confidence            99999976532       123467899999999997643      567899999999999999999888653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-45  Score=355.69  Aligned_cols=246  Identities=20%  Similarity=0.261  Sum_probs=188.3

Q ss_pred             eceecccCceEEEEEEEcCCC---eEEEEEEecCC--cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeE-CCEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEK---CQVAIKIIKNK--KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTW-KNHLCL  188 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~---~~vaiK~i~~~--~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~-~~~~~l  188 (437)
                      .++||+|+||+||+|....++   ..||||+++..  .....++.+|+.++.++     .|||||++++++.. +..+++
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~~l  106 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSEGSPLV  106 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEETTTEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCEeEEeEEEEecCCceEE
Confidence            578999999999999986543   36999999642  22335577788888776     78999999999876 468999


Q ss_pred             EEEeccC-cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCCCCEEEEeCCCceecC
Q psy11727        189 VFELLSY-NLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCHVG  267 (437)
Q Consensus       189 V~E~~~~-~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~~~  267 (437)
                      |||||++ +|.+++.... ..+++..+..++.|++.||.|||++  +|+||||||+|||+  ++++.+||+|||+++...
T Consensus       107 v~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~--~iiHrDLK~~NILl--~~~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         107 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK--KFVHRDLAARNCML--DEKFTVKVADFGLARDMY  181 (311)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT--TCCCSCCSGGGEEE--CTTCCEEECSSGGGCCTT
T ss_pred             EEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhccc--CcccCCccHHhEeE--CCCCCEEEecccchhhcc
Confidence            9999965 7777776543 4578889999999999999999964  79999999999999  778899999999997653


Q ss_pred             Cc-------cccccccccccChhhhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHHHhCCCChhhhcc
Q psy11727        268 QT-------LYQYIQSRYYRSPEVLLGIPYDLAIDMWSLGCILVELHTGEPLFSG-KNEVDQMTKIIEVLGMPPGYLLHG  339 (437)
Q Consensus       268 ~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~pf~~-~~~~~~~~~i~~~~~~p~~~~~~~  339 (437)
                      ..       .....||..|+|||++.+..++.++||||||+++|||+||..||.. .+..+....+......+.      
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~------  255 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ------  255 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCC------
T ss_pred             ccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence            22       1234678999999999999999999999999999999997666554 333333333322110000      


Q ss_pred             CCccchhhcccCCCcceeccccccccccCCCCCchhhhhccCCCCCCCCCCCCCCCChhhhhHHHHHHHHccccCCCCCC
Q psy11727        340 ASKTSKYFDRLSDNSYVLKKSTDTRKERLPGSKRLDTILGVDNGGPGGRRRNEPGHSLADYMKFKDLILRMLTYDPKKRI  419 (437)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~~L~~dP~~R~  419 (437)
                                                   |                        .   .....+.+||.+||+.||++||
T Consensus       256 -----------------------------p------------------------~---~~~~~l~~li~~cl~~dP~~RP  279 (311)
T d1r0pa_         256 -----------------------------P------------------------E---YCPDPLYEVMLKCWHPKAEMRP  279 (311)
T ss_dssp             -----------------------------C------------------------T---TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             -----------------------------c------------------------c---cCcHHHHHHHHHHcCCCHhHCc
Confidence                                         0                        0   0012578999999999999999


Q ss_pred             CHHHHhcC------CCcCc
Q psy11727        420 SPTNVLRH------EFFLK  432 (437)
Q Consensus       420 t~~e~l~H------p~~~~  432 (437)
                      |+.|+++|      .|+.+
T Consensus       280 s~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         280 SFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             CHHHHHHHHHHHHHTCCSC
T ss_pred             CHHHHHHHHHHHHHhhhhh
Confidence            99999988      66554

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=7.6e-25  Score=194.66  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=110.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCeEEEEEEecCCccc-------------------chHHHHHHHHHHHhhhcCCCCCc
Q psy11727        112 YEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPF-------------------LNQAQIEVQLLEKINKADIHSRY  172 (437)
Q Consensus       112 y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~-------------------~~~~~~e~~~~~~l~~~~~~h~~  172 (437)
                      +.+.++||+|+||+||+|.+. +|+.||||+++.....                   ......|...+..+     .|.+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~   75 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-----QGLA   75 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-----TTSS
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-----cCCC
Confidence            467899999999999999885 6889999987632110                   01112344444444     4556


Q ss_pred             EEEecceeeECCEEEEEEEeccCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCcEEEecCCC
Q psy11727        173 IVKLKGHFTWKNHLCLVFELLSYNLYNLIRNTNFHGVSLNLTKKFAQQLCCALAFLSSPELSIIHCDLKPENILLCSPKR  252 (437)
Q Consensus       173 iv~l~~~~~~~~~~~lV~E~~~~~L~~~l~~~~~~~ls~~~~~~i~~qi~~aL~~LH~~~~giiHrDiKp~NIll~~~~~  252 (437)
                      ++..+++.  .  .++|||++++...        ..++...+..++.||+.+|+|||.  .||+||||||+|||++  ++
T Consensus        76 v~~~~~~~--~--~~lvme~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~--~giiHrDiKP~NILv~--~~  139 (191)
T d1zara2          76 VPKVYAWE--G--NAVLMELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYH--RGIVHGDLSQYNVLVS--EE  139 (191)
T ss_dssp             SCCEEEEE--T--TEEEEECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHH--TTEECSCCSTTSEEEE--TT
T ss_pred             cceEEEec--C--CEEEEEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhh--CCEEEccCChhheeee--CC
Confidence            66655432  2  2799999987432        124556678899999999999995  4899999999999994  33


Q ss_pred             CCEEEEeCCCceecCCccccccccccccC------hhhhcCCCCCCcchHHHHHH
Q psy11727        253 SAIKIIDFGSSCHVGQTLYQYIQSRYYRS------PEVLLGIPYDLAIDMWSLGC  301 (437)
Q Consensus       253 ~~ikL~DFG~s~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~~DvwSlG~  301 (437)
                       .++|+|||+|.....+...     .|..      .+.+ ...|+.++|+||+.-
T Consensus       140 -~~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~  187 (191)
T d1zara2         140 -GIWIIDFPQSVEVGEEGWR-----EILERDVRNIITYF-SRTYRTEKDINSAID  187 (191)
T ss_dssp             -EEEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHH
T ss_pred             -CEEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHH-cCCCCCcccHHHHHH
Confidence             4999999999877543221     1111      1222 356889999999654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.34  E-value=1.4e-06  Score=78.49  Aligned_cols=86  Identities=12%  Similarity=0.045  Sum_probs=58.0

Q ss_pred             eeccCeeeeceecccCceEEEEEEEcCCCeEEEEEEecCCc-ccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCE
Q psy11727        107 KFLDRYEIDTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKK-PFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNH  185 (437)
Q Consensus       107 ~~~~~y~i~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~  185 (437)
                      .+.+.|++.+..+-++.+.||+..  .++..+++|+..... ........|...++.+.. .+.   +.+++.+..+++.
T Consensus        11 ~~~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~-~vp---vP~vl~~~~~~~~   84 (263)
T d1j7la_          11 KLIEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-KLP---VPKVLHFERHDGW   84 (263)
T ss_dssp             HHHTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-TSC---CCCEEEEEEETTE
T ss_pred             HhhhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc-cCC---CCcEEEEEecCCc
Confidence            345677777765555567899884  455567888875332 233457788888888753 223   3445566778889


Q ss_pred             EEEEEEeccC-cHH
Q psy11727        186 LCLVFELLSY-NLY  198 (437)
Q Consensus       186 ~~lV~E~~~~-~L~  198 (437)
                      .++||++++| .+.
T Consensus        85 ~~lv~~~l~G~~~~   98 (263)
T d1j7la_          85 SNLLMSEADGVLCS   98 (263)
T ss_dssp             EEEEEECCSSEEHH
T ss_pred             eEEEEEeccccccc
Confidence            9999999988 443

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.02  E-value=2.4e-05  Score=74.98  Aligned_cols=77  Identities=19%  Similarity=0.187  Sum_probs=48.8

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCC--------cccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNK--------KPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHL  186 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~--------~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~  186 (437)
                      .+.||.|....||++.+..+++.++||.-...        .....+...|...+..+...  .+..+.+++.  .+.+..
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~--~p~~vP~v~~--~d~~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH--VPHLVPRVFY--SDTEMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTT--CGGGSCCEEE--EETTTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhh--CCCCcceEEE--EcCCCC
Confidence            34579999999999988777889999965321        12245667788888776532  1123445543  345566


Q ss_pred             EEEEEeccC
Q psy11727        187 CLVFELLSY  195 (437)
Q Consensus       187 ~lV~E~~~~  195 (437)
                      ++|||++++
T Consensus       107 ~lvmE~L~~  115 (392)
T d2pula1         107 VTVMEDLSH  115 (392)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEeccCC
Confidence            799999975

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.74  E-value=9.6e-05  Score=65.64  Aligned_cols=73  Identities=14%  Similarity=0.015  Sum_probs=51.5

Q ss_pred             eecccCc-eEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEEEEEEeccC
Q psy11727        117 LLGKGSF-GQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       117 ~lG~G~f-g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~lV~E~~~~  195 (437)
                      .+..|.. +.||+... .++..+++|.....  .......|...++.+....+.   +.+++.+..+.+..++||++++|
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~--~~~~l~~E~~~l~~L~~~gvp---vP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVP---CAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCC---BCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCcc--CHhHHHHHHHHHHHHHhcCCC---CCceeeecccccceEEEEEeeec
Confidence            3455554 67898864 45666888987543  235678899999988876554   44455666777889999999976

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.00018  Score=66.79  Aligned_cols=71  Identities=14%  Similarity=0.148  Sum_probs=51.5

Q ss_pred             eEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEec--ceeeECCEEEEEEEeccC
Q psy11727        124 GQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLK--GHFTWKNHLCLVFELLSY  195 (437)
Q Consensus       124 g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~--~~~~~~~~~~lV~E~~~~  195 (437)
                      -.||++.. .+|..|++|+.+.......++..|+..+..+...++..+..+..-  ..+...+..+.++++++|
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            57999964 567889999987654455778889999999987766544333332  234567789999999875

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.09  E-value=0.0024  Score=58.29  Aligned_cols=146  Identities=12%  Similarity=0.102  Sum_probs=81.7

Q ss_pred             eceecccCceEEEEEEEcCCCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecce---eeECCEEEEEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHEEKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGH---FTWKNHLCLVFE  191 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~---~~~~~~~~lV~E  191 (437)
                      .+.|..|---+.|+.... +| .+++|+.... ........|+.++..+...++..|..+...+-   .........++.
T Consensus        23 ~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~   99 (316)
T d2ppqa1          23 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS   99 (316)
T ss_dssp             EEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             eecCCCCcccCeEEEEEC-CC-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeee
Confidence            344567777888998653 34 4899998643 34567788999999998887766654443221   223556677777


Q ss_pred             eccCc-H-----HH---------HHHh--cCCC-----------------------CCCHHHHHHHHHHHHHHHHHhcCC
Q psy11727        192 LLSYN-L-----YN---------LIRN--TNFH-----------------------GVSLNLTKKFAQQLCCALAFLSSP  231 (437)
Q Consensus       192 ~~~~~-L-----~~---------~l~~--~~~~-----------------------~ls~~~~~~i~~qi~~aL~~LH~~  231 (437)
                      ++.+. .     ..         .+..  ..+.                       ..........+..+...+.-.+..
T Consensus       100 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  179 (316)
T d2ppqa1         100 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  179 (316)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             ecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcc
Confidence            66431 1     00         0000  0000                       001111122233333344443322


Q ss_pred             --CCCeeeCCCCCCcEEEecCCCCCEEEEeCCCcee
Q psy11727        232 --ELSIIHCDLKPENILLCSPKRSAIKIIDFGSSCH  265 (437)
Q Consensus       232 --~~giiHrDiKp~NIll~~~~~~~ikL~DFG~s~~  265 (437)
                        ..|+||+|+.++||++  +++...-|+||+.++.
T Consensus       180 ~L~~giIHgDl~~dNvl~--~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         180 DLPAGVIHADLFQDNVFF--LGDELSGLIDFYFACN  213 (316)
T ss_dssp             SSCEEEECSCCCGGGEEE--ETTEEEEECCCTTCEE
T ss_pred             ccccccccCCcchhhhhc--ccccceeEeccccccc
Confidence              3579999999999999  4555567999999864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.99  E-value=0.0017  Score=61.61  Aligned_cols=72  Identities=15%  Similarity=0.123  Sum_probs=47.7

Q ss_pred             eceecccCceEEEEEEEcC-------CCeEEEEEEecCCcccchHHHHHHHHHHHhhhcCCCCCcEEEecceeeECCEEE
Q psy11727        115 DTLLGKGSFGQVVKAFDHE-------EKCQVAIKIIKNKKPFLNQAQIEVQLLEKINKADIHSRYIVKLKGHFTWKNHLC  187 (437)
Q Consensus       115 ~~~lG~G~fg~V~~~~~~~-------~~~~vaiK~i~~~~~~~~~~~~e~~~~~~l~~~~~~h~~iv~l~~~~~~~~~~~  187 (437)
                      ++.|+-|-.-.+|++....       ..+.|.+++.-.. .......+|..+++.+...++. |   +++++|.  +  .
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~~idr~~E~~i~~~ls~~gl~-P---kll~~~~--~--g  117 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLG-P---KLYGIFS--G--G  117 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSS-S---CEEEEET--T--E
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-chhhHHHHHHHHHHHHHhCCCC-C---eEEEEcC--C--c
Confidence            3567777788899887543       3456888887533 2334456799999998877653 3   3444443  2  5


Q ss_pred             EEEEeccC
Q psy11727        188 LVFELLSY  195 (437)
Q Consensus       188 lV~E~~~~  195 (437)
                      +|+||+.|
T Consensus       118 ~I~efi~g  125 (395)
T d1nw1a_         118 RLEEYIPS  125 (395)
T ss_dssp             EEECCCCE
T ss_pred             eEEEEecc
Confidence            78999875