Psyllid ID: psy11791

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIKQKPKVAKRTIFPVIPSYENIPTDNEVTKLY
Secondary Structure (PSIPRED)
cccccEEEEEEEcccccccccccEEcccccEEEEEEcccccccEEEcccccEEEEccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEEEEcccccEEEEccccEEEEEEEcccccEEEEccccccEEEcHHHEEEEcccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccEEEcccccccccccccccEEEcc
Coil and Loop (DISEMBL)
MELQDVTLKVLYDfdystkdgkyvrIQEGEKLFLIKKTNKDWWQVIRssgkpfyvpaSYVEVYKKLsngnrnnveninptmektrsysegndkggfvsvkdraisidnnssikqkpkvakrtifpvipsyeniptdnevtkly
Flexible Loop (DISEMBL)
melqdvtlkvlydfdystkdgkyvriQEGEKLFLIKKTNKDWWQVIRssgkpfyvpASYVEVYKklsngnrnnveninptmektrsysegndkGGFVSVKdraisidnnssikqkpkvakrtifpvipsyeniptdnevtkly
Low Complexity Region (SEG)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIKQKPKVAKRTIFPVIPSYENIPTDNEVTKLY
Disordered region (IsUnstruct)
*****VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL******************************************************RTIFPVIPSY*************
Disordered Region (DISOPRED)
****DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV*******************************************************************************L*
Disordered Region (DISEMBL)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIKQKPKVAKRTIFPVIPSYENIPTDNEVTKLY
Disordered Region (DISPRO)
***QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL*****************************************NNSSIKQKPKVAKRTIFPVIPSYENIPTDNEVTKLY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIKQKPKVAKRTIFPVIPSYENIPTDNEVTKLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q8IWW6	846	Rho GTPase-activating pro	yes	N/A	0.412	0.069	0.532	8e-09
Q8C0D4	838	Rho GTPase-activating pro	no	N/A	0.398	0.068	0.533	9e-09
Q9BE31	847	Rho GTPase-activating pro	N/A	N/A	0.398	0.067	0.533	1e-08
Q9BRR9	750	Rho GTPase-activating pro	no	N/A	0.370	0.070	0.421	4e-08
Q6TLK4	869	Rho GTPase-activating pro	no	N/A	0.391	0.064	0.421	9e-08
A2AB59	869	Rho GTPase-activating pro	no	N/A	0.391	0.064	0.421	9e-08
Q6ZUM4	889	Rho GTPase-activating pro	no	N/A	0.391	0.062	0.421	1e-07
Q66K37	72	Putative Rho GTPase-activ	no	N/A	0.391	0.777	0.421	4e-07
Q6CHN0	1136	Actin cytoskeleton-regula	yes	N/A	0.363	0.045	0.472	4e-06
Q13813	2472	Spectrin alpha chain, non	no	N/A	0.447	0.025	0.353	9e-05

>sp|Q8IWW6|RHG12_HUMAN Rho GTPase-activating protein 12 OS=Homo sapiens GN=ARHGAP12 PE=1 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVY 63
          V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct: 15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query: 64 KK 65
          +K
Sbjct: 74 RK 75

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.
Homo sapiens (taxid: 9606)

>sp|Q8C0D4|RHG12_MOUSE Rho GTPase-activating protein 12 OS=Mus musculus GN=Arhgap12 PE=1 SV=2

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVYKK 65
          ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV +K
Sbjct: 15 IEVEYDYEYDAKDRKIV-IRQGERYLLVKKTNDDWWQVRPDENSKAFYVPAQYVKEVTRK 73

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Mus musculus (taxid: 10090)

>sp|Q9BE31|RHG12_MACFA Rho GTPase-activating protein 12 OS=Macaca fascicularis GN=ARHGAP12 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVYKK 65
          ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV +K
Sbjct: 17 IEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVTRK 75

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Macaca fascicularis (taxid: 9541)

>sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          L  LY F Y+  DG+ V + EG++  L++KTN DWW   R    S+ +P +VPA+Y+
Sbjct: 27 LCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYM 83

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Has a substantial GAP activity toward CDC42 and RAC1 and less toward RHOA. Has a role in regulating adhesion of hematopoietic cells to the extracellular matrix.

Homo sapiens (taxid: 9606)

>sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus norvegicus GN=Arhgap27 PE=1 SV=1

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ + IQ  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRLIAIQPNERCRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Rattus norvegicus (taxid: 10116)

>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus musculus GN=Arhgap27 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ + IQ  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRRIAIQPNERYRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Mus musculus (taxid: 10090)

>sp|Q6ZUM4|RHG27_HUMAN Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1 SV=3

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ V I+  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRRVAIRPNERYRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Homo sapiens (taxid: 9606)

>sp|Q66K37|RH27L_HUMAN Putative Rho GTPase-activating protein 27-like protein OS=Homo sapiens PE=5 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV L V + F+Y+ KD + V I   E+ +L++++ + WW V R   G PFY+PA YV
Sbjct: 8  DVYLVVEHPFEYTRKDWRRVAIWPNERYWLLRRSTEHWWHVRREPGGHPFYLPAQYV 64

Homo sapiens (taxid: 9606)

>sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex protein SLA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SLA1 PE=3 SV=1

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV 62
           KVLY FD   +D   V ++EGE +F+I  T ++DWW V  SSG    VP+SY+E+
Sbjct: 362 KVLYKFDAQGRD--EVSVEEGENVFIIDDTKSRDWWMVKNSSGVAGVVPSSYIEI 414

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q13813|SPTN1_HUMAN Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1 PE=1 SV=3

 Score = 45.4 bits (106), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 10   VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG 69
            VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+      + 
Sbjct: 972  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLDPAQSA 1030

Query: 70   NRNNV 74
            +R N+
Sbjct: 1031 SRENL 1035

Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
328723474	940	PREDICTED: rho GTPase-activating protein	0.734	0.111	0.446	9e-23
326534202	938	predicted protein [Hordeum vulgare subsp	0.727	0.110	0.45	2e-22
242014156	709	conserved hypothetical protein [Pediculu	0.489	0.098	0.492	8e-12
47222842	906	unnamed protein product [Tetraodon nigro	0.384	0.060	0.542	7e-10
410920229	896	PREDICTED: rho GTPase-activating protein	0.384	0.061	0.542	9e-10
432858075	887	PREDICTED: rho GTPase-activating protein	0.384	0.062	0.542	2e-09
348528805	865	PREDICTED: rho GTPase-activating protein	0.384	0.063	0.542	3e-09
223647562	894	Rho GTPase-activating protein 15 [Salmo	0.384	0.061	0.525	4e-09
317418795	873	Rho GTPase-activating protein 12 [Dicent	0.384	0.063	0.542	6e-09
449492172	839	PREDICTED: rho GTPase-activating protein	0.517	0.088	0.421	8e-09

>gi|328723474|ref|XP_001944075.2| PREDICTED: rho GTPase-activating protein 12-like [Acyrthosiphon pisum]

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 34/139 (24%)

Query: 1   MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
           M++ D  ++VLYDF+Y T++ K V I+EGEKL L+KKTN DWWQVIRSSG+PFYVPA++V
Sbjct: 1   MDISDTKVRVLYDFEYKTRENKCVSIKEGEKLLLLKKTNDDWWQVIRSSGQPFYVPATFV 60

Query: 61  EVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIKQKPKVAK 120
           +                 P      S S+G +K                  I +KP+V K
Sbjct: 61  KEI---------------PRAPSRPSLSKGEEK-----------------IIIEKPQVLK 88

Query: 121 RTIF--PVIPSYENIPTDN 137
           RTIF  P+ PSYENIP +N
Sbjct: 89  RTIFEKPLTPSYENIPLEN 107

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326534202|dbj|BAJ89451.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 82/140 (58%), Gaps = 36/140 (25%)

Query: 1   MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
           M++ D  ++VLYDF+Y T++ K V I+EGEKL L+KKTN DWWQVIRSSG+PFYVPA++V
Sbjct: 1   MDISDTKVRVLYDFEYKTRENKCVSIKEGEKLLLLKKTNDDWWQVIRSSGQPFYVPATFV 60

Query: 61  EVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKDRAISIDNNSSIK-QKPKVA 119
           +                 P      S S+G +K                  IK +KP+V 
Sbjct: 61  KEI---------------PRAPSRPSLSKGEEK------------------IKVEKPQVL 87

Query: 120 KRTIF--PVIPSYENIPTDN 137
           KRTIF  P+ PSYENIP +N
Sbjct: 88  KRTIFEKPLTPSYENIPLEN 107

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242014156|ref|XP_002427761.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512215|gb|EEB15023.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL 66
          L VLYDF Y  KD + + +++GEKL L++KTN+DWWQV+R S  K F+VPA YVE+  K 
Sbjct: 14 LVVLYDFRYMWKDNREISVKKGEKLLLLEKTNRDWWQVVRPSERKSFFVPAQYVELLVKW 73

Query: 67 SNGNRNNVENI 77
             N+++ E+ 
Sbjct: 74 KTQNKDDAESF 84

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47222842|emb|CAF96509.1| unnamed protein product [Tetraodon nigroviridis]

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD++Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 32 VVLEAQYDYNYRGNDGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 90

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410920229|ref|XP_003973586.1| PREDICTED: rho GTPase-activating protein 9-like [Takifugu rubripes]

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD++Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYNYRANDGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 94

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432858075|ref|XP_004068815.1| PREDICTED: rho GTPase-activating protein 12-like [Oryzias latipes]

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYSYRGADGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 94

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348528805|ref|XP_003451906.1| PREDICTED: rho GTPase-activating protein 9-like [Oreochromis niloticus]

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 11 VVLEAQYDYSYRGADGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 69

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|223647562|gb|ACN10539.1| Rho GTPase-activating protein 15 [Salmo salar]

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6   VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
           V L+  YD+ Y   DG+ V I+EGE+  L++KTN DWWQV R    S  KP YVPA+YV
Sbjct: 60  VVLEAQYDYQYRGTDGRQVCIREGERFILLRKTNTDWWQVRRIGAASKAKPLYVPATYV 118

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|317418795|emb|CBN80833.1| Rho GTPase-activating protein 12 [Dicentrarchus labrax]

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYSYRGADGRQVCISEGERFVLLKKTNTDWWQVRRIGAASKTKPLYVPATYV 94

Source: Dicentrarchus labrax

Species: Dicentrarchus labrax

Genus: Dicentrarchus

Family: Moronidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449492172|ref|XP_002195522.2| PREDICTED: rho GTPase-activating protein 12 [Taeniopygia guttata]

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 21/95 (22%)

Query: 8   LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV-EVYK- 64
           ++V YD++Y  KD K V I++GEK  L+KKTN DWWQV R  + KPFYVPA YV E+ + 
Sbjct: 15  IQVEYDYEYEAKDKKIV-IKQGEKYILVKKTNDDWWQVKRDENSKPFYVPAQYVKEIPRK 73

Query: 65  -----------------KLSNGNRNNVENINPTME 82
                            KL++G + + EN+N + E
Sbjct: 74  ALMPPVKQASMLPNNTLKLTHGLQRSTENVNKSPE 108

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
ZFIN|ZDB-GENE-040426-1727	817	arhgap12b "Rho GTPase activati	0.419	0.073	0.523	6.7e-15
RGD|1310017	813	Arhgap12 "Rho GTPase activatin	0.559	0.098	0.452	7e-11
ZFIN|ZDB-GENE-050809-38	831	arhgap12a "Rho GTPase activati	0.405	0.069	0.524	7.2e-11
UNIPROTKB|F1NB60	815	ARHGAP12 "Uncharacterized prot	0.321	0.056	0.612	1.6e-10
UNIPROTKB|F1PR59	791	ARHGAP12 "Uncharacterized prot	0.412	0.074	0.532	3e-10
UNIPROTKB|F1PR61	838	ARHGAP12 "Uncharacterized prot	0.412	0.070	0.532	3.2e-10
UNIPROTKB|Q504X1	841	ARHGAP12 "Rho GTPase-activatin	0.412	0.070	0.532	3.2e-10
UNIPROTKB|Q8IWW6	846	ARHGAP12 "Rho GTPase-activatin	0.412	0.069	0.532	3.2e-10
UNIPROTKB|A6QPU2	793	ARHGAP12 "ARHGAP12 protein" [B	0.384	0.069	0.543	3.8e-10
UNIPROTKB|F1RWC6	848	ARHGAP12 "Uncharacterized prot	0.412	0.069	0.532	4.1e-10

ZFIN|ZDB-GENE-040426-1727 arhgap12b "Rho GTPase activating protein 12b" [Danio rerio (taxid:7955)]

 Score = 161 (61.7 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-KPFYVPASYV-EVY 63
             V ++V YD++Y  KD K + I++GE   L++KTN+DWWQV R  G K FYVPA YV EV 
Sbjct:    17 VYIEVEYDYEYKAKD-KLISIRQGECYMLVRKTNEDWWQVRREEGTKAFYVPAQYVREVR 75

Query:    64 KKL 66
             + L
Sbjct:    76 RAL 78

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

RGD|1310017 Arhgap12 "Rho GTPase activating protein 12" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 7.0e-11, P = 7.0e-11
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV +  + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IRQGERYLLVKKTNDDWWQVRLDENSKAFYVPAQYVKEVT 71

Query:    64 KK-LSNGNRNNVENINPTMEKTRS 86
             +K L    +      N +M+ T+S
Sbjct:    72 RKALMPPVKQTTGLPNNSMKTTQS 95

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-050809-38 arhgap12a "Rho GTPase activating protein 12a" [Danio rerio (taxid:7955)]

 Score = 163 (62.4 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 32/61 (52%), Positives = 43/61 (70%)

Query:     8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVYKK 65
             ++V YD+DY +KD + + I+ GE   L+KKTN DWWQV +  + KPFYVPA YV EV + 
Sbjct:    13 IEVEYDYDYKSKD-RLITIKHGESYLLVKKTNDDWWQVRKDDASKPFYVPAQYVREVRRA 71

Query:    66 L 66
             L
Sbjct:    72 L 72

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1NB60 ARHGAP12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 142 (55.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 30/49 (61%), Positives = 36/49 (73%)

Query:    19 KDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVYKK 65
             KD K V I++GEK  L+KKTN DWWQV R  + KPFYVPA YV E+ +K
Sbjct:     2 KDKKIV-IKQGEKYILVKKTNDDWWQVKRDENSKPFYVPAQYVKEIPRK 49

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|F1PR59 ARHGAP12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 157 (60.3 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 71

Query:    64 KK 65
             +K
Sbjct:    72 RK 73

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1PR61 ARHGAP12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 71

Query:    64 KK 65
             +K
Sbjct:    72 RK 73

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|Q504X1 ARHGAP12 "Rho GTPase-activating protein 12" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|Q8IWW6 ARHGAP12 "Rho GTPase-activating protein 12" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

UNIPROTKB|A6QPU2 ARHGAP12 "ARHGAP12 protein" [Bos taurus (taxid:9913)]

 Score = 156 (60.0 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVE 61
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    S K FYVPA YV+
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IKQGERYLLVKKTNDDWWQVKPDESSKAFYVPAQYVK 68

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1RWC6 ARHGAP12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 156 (60.0 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVG 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IWW6	RHG12_HUMAN	No assigned EC number	0.5322	0.4125	0.0697	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
cd11888	54	cd11888, SH3_ARHGAP9_like, Src Homology 3 domain o	6e-20
cd12143	57	cd12143, SH3_ARHGAP9, Src Homology 3 domain of Rho	3e-16
cd12069	57	cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rh	1e-14
cd12070	60	cd12070, SH3_ARHGAP12, Src Homology 3 domain of Rh	7e-12
cd11849	53	cd11849, SH3_SPIN90, Src homology 3 domain of SH3	8e-11
smart00326	56	smart00326, SH3, Src homology 3 domains	9e-09
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	5e-07
cd11911	55	cd11911, SH3_CIP4-like, Src Homology 3 domain of C	6e-07
cd11775	57	cd11775, SH3_Sla1p_3, Third Src Homology 3 domain	1e-06
pfam00018	47	pfam00018, SH3_1, SH3 domain	5e-06
cd11808	53	cd11808, SH3_Alpha_Spectrin, Src homology 3 domain	6e-06
cd11768	54	cd11768, SH3_Tec_like, Src Homology 3 domain of Te	3e-05
cd11765	51	cd11765, SH3_Nck_1, First Src Homology 3 domain of	3e-05
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	5e-05
cd11806	53	cd11806, SH3_PRMT2, Src homology 3 domain of Prote	7e-05
cd12072	57	cd12072, SH3_FNBP1L, Src Homology 3 domain of Form	2e-04
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	2e-04
cd12071	57	cd12071, SH3_FBP17, Src Homology 3 domain of Formi	2e-04
cd11856	53	cd11856, SH3_p47phox_like, Src homology 3 domains	2e-04
cd11855	55	cd11855, SH3_Sho1p, Src homology 3 domain of High	3e-04
cd11908	56	cd11908, SH3_ITK, Src Homology 3 domain of Interle	4e-04
cd11899	58	cd11899, SH3_Nck2_1, First Src Homology 3 domain o	4e-04
cd11758	55	cd11758, SH3_CRK_N, N-terminal Src Homology 3 doma	5e-04
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	6e-04
cd11900	59	cd11900, SH3_Nck1_1, First Src Homology 3 domain o	6e-04
cd11879	56	cd11879, SH3_Bem1p_2, Second Src Homology 3 domain	6e-04
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	9e-04
cd12006	56	cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn	0.001
cd11777	55	cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain	0.001
cd12007	58	cd12007, SH3_Yes, Src homology 3 domain of Yes Pro	0.002
cd12008	56	cd12008, SH3_Src, Src homology 3 domain of Src Pro	0.002
cd11905	56	cd11905, SH3_Tec, Src Homology 3 domain of Tec (Ty	0.002
cd11896	55	cd11896, SH3_SNX33, Src Homology 3 domain of Sorti	0.002
cd11955	53	cd11955, SH3_srGAP1-3, Src homology 3 domain of Sl	0.003
cd11912	55	cd11912, SH3_Bzz1_1, First Src Homology 3 domain o	0.003

>gnl|CDD|212821 cd11888, SH3_ARHGAP9_like, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 77.0 bits (190), Expect = 6e-20
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASY 59
           + VLY F+Y+ KDG+ V I+EGE+  L+KK+N DWWQV R    KPFYVPA Y
Sbjct: 1  YVVVLYPFEYTGKDGRKVSIKEGERFLLLKKSNDDWWQVRRPGDSKPFYVPAQY 54

This subfamily is composed of Rho GTPase-activating proteins including mammalian ARHGAP9, and vertebrate ARHGAPs 12 and 27. RhoGAPs (or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating HFG-driven cell growth and invasiveness. ARHGAPs in this subfamily contain SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|213019 cd12143, SH3_ARHGAP9, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 67.6 bits (165), Expect = 3e-16
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 4/56 (7%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASY 59
          L  LY + Y+  DG+ V I EGE+  L++KTN DWWQV R    S+ +P +VPA+Y
Sbjct: 2  LCALYAYQYTGADGRQVSIAEGERFLLLRKTNSDWWQVRRLEAPSTSRPLFVPATY 57

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 57

>gnl|CDD|213002 cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rho GTPase-activating protein 27

 Score = 63.3 bits (154), Expect = 1e-14
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEV 62
          V + F+Y+ KDG+ V I+  E+  L+++TN+ WW V R    +PFY+PA YV+ 
Sbjct: 4  VEHAFEYTGKDGRLVSIKPNERYILLRRTNEHWWHVRRDKGTRPFYIPAKYVKE 57

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 57

>gnl|CDD|213003 cd12070, SH3_ARHGAP12, Src Homology 3 domain of Rho GTPase-activating protein 12

 Score = 56.5 bits (136), Expect = 7e-12
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 2/55 (3%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
          ++V YD+DY  KD K V I++GE+  L+KKTN DWWQV +  + KPFYVPA YV+
Sbjct: 3  IEVEYDYDYEAKDRKIV-IKQGERYILVKKTNDDWWQVKKDENSKPFYVPAQYVK 56

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating hepatocyte growth factor (HGF)-driven cell growth and invasiveness. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212783 cd11849, SH3_SPIN90, Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)

 Score = 53.5 bits (129), Expect = 8e-11
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           + LYDF   + +   +   EGE   L++++N  WW V   SG+  YVPA+YV+
Sbjct: 2  YRALYDF--KSAEPNTLSFSEGETFLLLERSNAHWWLVTNHSGETGYVPANYVK 53

SPIN90 is also called NCK interacting protein with SH3 domain (NCKIPSD), Dia-interacting protein (DIP), 54 kDa vimentin-interacting protein (VIP54), or WASP-interacting SH3-domain protein (WISH). It is an F-actin binding protein that regulates actin polymerization and endocytosis. It associates with the Arp2/3 complex near actin filaments and determines filament localization at the leading edge of lamellipodia. SPIN90 is expressed in the early stages of neuronal differentiation and plays a role in regulating growth cone dynamics and neurite outgrowth. It also interacts with IRSp53 and regulates cell motility by playing a role in the formation of membrane protrusions. SPIN90 contains an N-terminal SH3 domain, a proline-rich domain, and a C-terminal VCA (verprolin-homology and cofilin-like acidic) domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            ++ LYD+     D   +  ++G+ + +++K++  WW+     GK    P++YVE
Sbjct: 3  PQVRALYDYTAQDPDE--LSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 43.6 bits (104), Expect = 5e-07
 Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASY 59
          + LYD++    D   +  ++G+ + +++K +  WW+   + G+    PA+Y
Sbjct: 3  RALYDYEAQDDDE--LSFKKGDIITVLEKDDDGWWEGELNGGREGLFPANY 51

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212844 cd11911, SH3_CIP4-like, Src Homology 3 domain of Cdc42-Interacting Protein 4

 Score = 43.4 bits (103), Expect = 6e-07
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
            LYDFD  T +G  + ++EGE L ++++   D W +V +++G   YVP SY+EV
Sbjct: 3  TALYDFD-GTSEGT-LSMEEGEILLVLEEDGGDGWTRVRKNNGDEGYVPTSYIEV 55

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4), Formin Binding Protein 17 (FBP17), FormiN Binding Protein 1-Like (FNBP1L), and similar proteins. CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. It functions downstream of Cdc42 in PDGF-dependent actin reorganization and cell migration, and also regulates the activity of PDGFRbeta. It uses Src as a substrate in regulating the invasiveness of breast tumor cells. CIP4 may also play a role in the pathogenesis of Huntington's disease. Members of this subfamily typically contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of CIP4 associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212709 cd11775, SH3_Sla1p_3, Third Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLI-KKTNKDWWQVIR-SSGKPFYVPASYVEV 62
          KVLYDFD  + D   + ++EG+ ++++  K +KDWW V   S+GK   VPASY+E+
Sbjct: 4  KVLYDFDAQSDD--ELTVKEGDVVYILDDKKSKDWWMVENVSTGKEGVVPASYIEI 57

Sla1p facilitates endocytosis by playing a role as an adaptor protein in coupling components of the actin cytoskeleton to the endocytic machinery. It interacts with Abp1p, Las17p and Pan1p, which are activator proteins of actin-related protein 2/3 (Arp2/3). Sla1p contains multiple domains including three SH3 domains, a SAM (sterile alpha motif) domain, and a Sla1 homology domain 1 (SHD1), which binds to the NPFXD motif that is found in many integral membrane proteins such as the Golgi-localized Arf-binding protein Lsb5p and the P4-ATPases, Drs2p and Dnf1p. The third SH3 domain of Sla1p can bind ubiquitin while retaining the ability to bind proline-rich ligands; monoubiquitination of target proteins signals internalization and sorting through the endocytic pathway. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPA 57
            LYD+     D   +  ++G+ + +++K++  WW+     GK   +P+
Sbjct: 1  VALYDYTAREPD--ELSFKKGDIIIVLEKSDDGWWKGRLKGGKEGLIPS 47

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212742 cd11808, SH3_Alpha_Spectrin, Src homology 3 domain of Alpha Spectrin

 Score = 40.9 bits (96), Expect = 6e-06
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           V+  +DY  K  + V +++G+ L L+  +NKDWW+V   + +  +VPA+YV+
Sbjct: 1  CVVALYDYQEKSPREVSMKKGDILTLLNSSNKDWWKV-EVNDRQGFVPAAYVK 52

Spectrin is a major structural component of the red blood cell membrane skeleton and is important in erythropoiesis and membrane biogenesis. It is a flexible, rope-like molecule composed of two subunits, alpha and beta, which consist of many spectrin-type repeats. Alpha and beta spectrin associate to form heterodimers and tetramers; spectrin tetramer formation is critical for red cell shape and deformability. Defects in alpha spectrin have been associated with inherited hemolytic anemias including hereditary spherocytosis (HSp), hereditary elliptocytosis (HE), and hereditary pyropoikilocytosis (HPP). Alpha spectrin contains a middle SH3 domain and a C-terminal EF-hand binding motif in addition to multiple spectrin repeats. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212702 cd11768, SH3_Tec_like, Src Homology 3 domain of Tec-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 11/48 (22%), Positives = 28/48 (58%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          +D+   +   + +++GE+  ++  +N+ WW+    +G   Y+P++YV 
Sbjct: 6  YDFQPIEPGDLPLEKGEEYVVLDDSNEHWWRARDKNGNEGYIPSNYVT 53

The Tec (Tyrosine kinase expressed in hepatocellular carcinoma) subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) tyr kinases containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212699 cd11765, SH3_Nck_1, First Src Homology 3 domain of Nck adaptor proteins

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          V+  +DY+ +  + + I++ EKL L+  + K WW+V  SS +  YVP++YV
Sbjct: 2  VVAKYDYTAQGDQELSIKKNEKLTLLDDS-KHWWKVQNSSNQTGYVPSNYV 51

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The first SH3 domain of Nck proteins preferentially binds the PxxDY sequence, which is present in the CD3e cytoplasmic tail. This binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 38.5 bits (90), Expect = 5e-05
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          + LYDFD        + ++ GE L + ++   D W +   S G+    P+SYVE+
Sbjct: 3  RALYDFDSQPSGE--LSLRAGEVLTITRQDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212740 cd11806, SH3_PRMT2, Src homology 3 domain of Protein arginine N-methyltransferase 2

 Score = 38.1 bits (89), Expect = 7e-05
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 15 DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          D+   D   +  + G+KL +++K + DWW     +G   Y+PAS++
Sbjct: 7  DFVATDDSQLSFESGDKLLVLRKPSVDWWWA-EHNGCCGYIPASHL 51

PRMT2, also called HRMT1L1, belongs to the arginine methyltransferase protein family. It functions as a coactivator to both estrogen receptor alpha (ER-alpha) and androgen receptor (AR), presumably through arginine methylation. The ER-alpha transcription factor is involved in cell proliferation, differentiation, morphogenesis, and apoptosis, and is also implicated in the development and progression of breast cancer. PRMT2 and its variants are upregulated in breast cancer cells and may be involved in modulating the ER-alpha signaling pathway during formation of breast cancer. PRMT2 also plays a role in regulating the function of E2F transcription factors, which are critical cell cycle regulators, by binding to the retinoblastoma gene product (RB). It contains an N-terminal SH3 domain and an AdoMet binding domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|213005 cd12072, SH3_FNBP1L, Src Homology 3 domain of Formin Binding Protein 1-Like

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          K LY FD  + +G    ++EGE L++I++   D W +  + +G+  YVP SY+E+
Sbjct: 4  KALYPFD-GSNEGTLA-MKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIEI 56

FormiN Binding Protein 1-Like (FNBP1L), also known as Toca-1 (Transducer of Cdc42-dependent actin assembly), forms a complex with neural Wiskott-Aldrich syndrome protein (N-WASP). The FNBP1L/N-WASP complex induces the formation of filopodia and endocytic vesicles. FNBP1L is required for Cdc42-induced actin assembly and is essential for autophagy of intracellular pathogens. It contains an N-terminal F-BAR domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of the related protein, CIP4, associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASY 59
          LYD++  T D   +  ++G++L ++  ++ DWW     S+GK  Y+P++Y
Sbjct: 5  LYDYEARTDDD--LSFKKGDRLQILDDSDGDWWLARHLSTGKEGYIPSNY 52

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|213004 cd12071, SH3_FBP17, Src Homology 3 domain of Formin Binding Protein 17

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVY 63
          T K LY F+   ++   + + EGE L++I++   D W ++ R+  +  YVP SY+EVY
Sbjct: 2  TCKALYPFE--GQNEGTISVAEGEMLYVIEEDKGDGWTRIRRNEDEEGYVPTSYIEVY 57

Formin Binding Protein 17 (FBP17), also called FormiN Binding Protein 1 (FNBP1), is involved in dynamin-mediated endocytosis. It is recruited to clathrin-coated pits late in the endocytosis process and may play a role in the invagination and scission steps. FBP17 binds in vivo to tankyrase, a protein involved in telomere maintenance and mitogen activated protein kinase (MAPK) signaling. It contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain, a Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of the related protein, CIP4, associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212790 cd11856, SH3_p47phox_like, Src homology 3 domains of the p47phox subunit of NADPH oxidase and similar domains

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           + D++    D   + +QEGE + +++K +  WW V R   K  +VPASY+E
Sbjct: 4  AIADYEAQGDDE--ISLQEGEVVEVLEKNDSGWWYV-RKGDKEGWVPASYLE 52

This family is composed of the tandem SH3 domains of p47phox subunit of NADPH oxidase and Nox Organizing protein 1 (NoxO1), the four SH3 domains of Tks4 (Tyr kinase substrate with four SH3 domains), the five SH3 domains of Tks5, the SH3 domain of obscurin, Myosin-I, and similar domains. Most members of this group also contain Phox homology (PX) domains, except for obscurin and Myosin-I. p47phox and NoxO1 are regulators of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) and nonphagocytic NADPH oxidase Nox1, respectively. They play roles in the activation of their respective NADPH oxidase, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Obscurin is a giant muscle protein that plays important roles in the organization and assembly of the myofibril and the sarcoplasmic reticulum. Type I myosins (Myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212789 cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            + LY +D S  D   +  ++GE +  +  T+  WWQ  +S+G+    P++Y+++
Sbjct: 1  RARALYPYDASPDDPNELSFEKGE-ILEVSDTSGKWWQARKSNGETGICPSNYLQL 55

Sho1p (or Sho1), also called SSU81 (Suppressor of SUA8-1 mutation), is a yeast membrane protein that regulates adaptation to high salt conditions by activating the HOG (high-osmolarity glycerol) pathway. High salt concentrations lead to the localization to the membrane of the MAPKK Pbs2, which is then activated by the MAPKK Ste11 and in turn, activates the MAPK Hog1. Pbs2 is localized to the membrane though the interaction of its PxxP motif with the SH3 domain of Sho1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212841 cd11908, SH3_ITK, Src Homology 3 domain of Interleukin-2-inducible T-cell Kinase

 Score = 36.1 bits (83), Expect = 4e-04
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          V+  +DY T D + + ++  E+  L+  +   WW+V   +G   YVP+SY+
Sbjct: 3  VIALYDYQTNDPQELALRYNEEYHLLDSSEIHWWRVQDKNGHEGYVPSSYL 53

ITK (also known as Tsk or Emt) is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. ITK is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, ITK plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, ITK is crucial for the development of T-helper(Th)2 effector responses. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212832 cd11899, SH3_Nck2_1, First Src Homology 3 domain of Nck2 adaptor protein

 Score = 36.3 bits (83), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          V+  +DY+ +  + + I++ E+L+L+  + K WW+V  ++ +  YVP++YVE
Sbjct: 6  VIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVE 56

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck2 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212692 cd11758, SH3_CRK_N, N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           ++ L+DF  +  D + +  ++GE L +I+K  + WW    S GK   +P  YVE
Sbjct: 2  YVRALFDFPGN--DDEDLPFKKGEILTVIRKPEEQWWNARNSEGKTGMIPVPYVE 54

CRK adaptor proteins consists of SH2 and SH3 domains, which bind tyrosine-phosphorylated peptides and proline-rich motifs, respectively. They function downstream of protein tyrosine kinases in many signaling pathways started by various extracellular signals, including growth and differentiation factors. Cellular CRK (c-CRK) contains a single SH2 domain, followed by N-terminal and C-terminal SH3 domains. It is involved in the regulation of many cellular processes including cell growth, motility, adhesion, and apoptosis. CRK has been implicated in the malignancy of various human cancers. The N-terminal SH3 domain of CRK binds a number of target proteins including DOCK180, C3G, SOS, and cABL. The CRK family includes two alternatively spliced protein forms, CRKI and CRKII, that are expressed by the CRK gene, and the CRK-like (CRKL) protein, which is expressed by a distinct gene (CRKL). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 35.7 bits (83), Expect = 6e-04
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + LYD++    D      +EG+ L++  K++ +WW+     GK   +P++YVE
Sbjct: 3  RALYDYEAQHPDELS--FEEGDLLYISDKSDPNWWKA-TCGGKTGLIPSNYVE 52

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212833 cd11900, SH3_Nck1_1, First Src Homology 3 domain of Nck1 adaptor protein

 Score = 35.9 bits (82), Expect = 6e-04
 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          V+  FDY  +  + + I++ E+L+L+  + K WW+V  +  K  +VP++YVE
Sbjct: 5  VVAKFDYVAQQDQELDIKKNERLWLLDDS-KSWWRVRNAMNKTGFVPSNYVE 55

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck1 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212812 cd11879, SH3_Bem1p_2, Second Src Homology 3 domain of Bud emergence protein 1 and similar domains

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYVEV 62
          VLYDF     D   +  + G+ + +   +N +W+    I   G P  +P S+VE+
Sbjct: 4  VLYDFKAERPD--ELDAKAGDAIIICAHSNYEWFVAKPIGRLGGPGLIPVSFVEI 56

Members of this subfamily bear similarity to Saccharomyces cerevisiae Bem1p, containing two Src Homology 3 (SH3) domains at the N-terminus, a central PX domain, and a C-terminal PB1 domain. Bem1p is a scaffolding protein that is critical for proper Cdc42p activation during bud formation in yeast. During budding and mating, Bem1p migrates to the plasma membrane where it can serve as an adaptor for Cdc42p and some other proteins. Bem1p also functions as an effector of the G1 cyclin Cln3p and the cyclin-dependent kinase Cdc28p in promoting vacuolar fusion. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 35.0 bits (81), Expect = 9e-04
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          K LYD  Y   +   +   EG+ +  I++ ++ WW  + + G+    PA+YVE
Sbjct: 3  KALYD--YQAAEDNEISFVEGDIITQIEQIDEGWWLGVNAKGQKGLFPANYVE 53

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212939 cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV
Sbjct: 6  LYDYEARTEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54

Fyn and Yrk (Yes-related kinase) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212711 cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain of Cdc42-Interacting Protein 4, Bzz1 and similar domains

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          K LY F  S++    + + EGEKL L+++   D W +V R +G+  YVP SY+ +
Sbjct: 3  KALYAFVGSSEG--TISMTEGEKLSLVEEDKGDGWTRVRRDTGEEGYVPTSYIRI 55

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4) and similar proteins such as Formin Binding Protein 17 (FBP17) and FormiN Binding Protein 1-Like (FNBP1L), as well as yeast Bzz1 (or Bzz1p). CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. Bzz1 is also a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Members of this subfamily contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain as well as at least one C-terminal SH3 domain. Bzz1 contains a second SH3 domain at the C-terminus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212940 cd12007, SH3_Yes, Src homology 3 domain of Yes Protein Tyrosine Kinase

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          LYD++  T +   +  ++GE+  +I  T  DWW+    ++GK  Y+P++YV
Sbjct: 6  LYDYEARTTED--LSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYV 54

Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212941 cd12008, SH3_Src, Src homology 3 domain of Src Protein Tyrosine Kinase

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          +DY ++    +  ++GE+L ++  T  DWW     ++G+  Y+P++YV
Sbjct: 6  YDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 53

Src (or c-Src) is a cytoplasmic (or non-receptor) PTK and is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212838 cd11905, SH3_Tec, Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          +D+   +   +R++ GE+  +++K +  WW+     GK  Y+P++YV
Sbjct: 7  YDFQPTEPHDLRLETGEEYVILEKNDVHWWKARDKYGKEGYIPSNYV 53

Tec is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. It is more widely-expressed than other Tec subfamily kinases. Tec is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Tec is a key component of T-cell receptor (TCR) signaling, and is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212829 cd11896, SH3_SNX33, Src Homology 3 domain of Sorting Nexin 33

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          + LY F    K+   + IQE E+L +  + + D W Q   S G+    PASYVE+
Sbjct: 3  RALYSFQSENKE--EINIQENEELVIFSENSLDGWLQGQNSRGETGLFPASYVEI 55

SNX33 interacts with Wiskott-Aldrich syndrome protein (WASP) and plays a role in the maintenance of cell shape and cell cycle progression. It modulates the shedding and endocytosis of cellular prion protein (PrP(c)) and amyloid precursor protein (APP). SNXs are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNX33 also contains BAR and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212888 cd11955, SH3_srGAP1-3, Src homology 3 domain of Slit-Robo GTPase Activating Proteins 1, 2, and 3

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          FDY  +  + +  ++G  L L  + + DWW+  R +G    VP  Y+ V
Sbjct: 6  FDYVGRSARELSFKKGASLLLYHRASDDWWEG-RHNGIDGLVPHQYIVV 53

srGAP1, also called Rho GTPase-Activating Protein 13 (ARHGAP13), is a Cdc42- and RhoA-specific GAP and is expressed later in the development of central nervous system tissues. srGAP2 is expressed in zones of neuronal differentiation. It plays a role in the regeneration of neurons and axons. srGAP3, also called MEGAP (MEntal disorder associated GTPase-Activating Protein), is a Rho GAP with activity towards Rac1 and Cdc42. It impacts cell migration by regulating actin and microtubule cytoskeletal dynamics. The association between srGAP3 haploinsufficiency and mental retardation is under debate. srGAPs are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212845 cd11912, SH3_Bzz1_1, First Src Homology 3 domain of Bzz1 and similar domains

 Score = 33.7 bits (78), Expect = 0.003
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV 62
          KVLYD+  S  D   V I EGE++ +++  +   W  +R  SG+   VP SY+E+
Sbjct: 3  KVLYDYTASGDD--EVSISEGEEVTVLEPDDGSGWTKVRNGSGEEGLVPTSYIEI 55

Bzz1 (or Bzz1p) is a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Together with other proteins, it induces membrane scission in yeast. Bzz1 contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), a central coiled-coil, and two C-terminal SH3 domains. This model represents the first C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
KOG4226|consensus	379		99.66
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.63
KOG0197|consensus	468		99.62
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.48
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.47
KOG2199|consensus	462		99.41
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.36
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.34
KOG1029|consensus	1118		99.25
KOG1118|consensus	366		99.2
KOG4792|consensus	293		99.14
KOG4278|consensus	1157		99.14
KOG2070|consensus	661		99.05
KOG4226|consensus	379		99.01
KOG0162|consensus	1106		98.99
KOG0515|consensus	752		98.95
KOG4225|consensus	489		98.95
KOG2856|consensus	472		98.89
KOG2996|consensus	865		98.79
KOG3601|consensus	222		98.79
KOG1264|consensus	1267		98.75
KOG4348|consensus	627		98.7
KOG4348|consensus	627		98.68
KOG3557|consensus	721		98.63
KOG3875|consensus	362		98.6
KOG2546|consensus	483		98.52
KOG1029|consensus	1118		98.5
KOG4225|consensus	489		98.48
KOG3655|consensus	484		98.46
KOG1843|consensus	473		98.42
KOG3601|consensus	222		98.33
KOG2996|consensus	865		98.14
KOG0609|consensus	542		97.99
KOG1702|consensus	264		97.97
KOG2528|consensus	490		97.62
KOG3632|consensus	1335		97.51
KOG3523|consensus	695		97.34
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	97.34
KOG2222|consensus	848		97.3
KOG4773|consensus	386		96.98
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	96.94
KOG4575|consensus	874		96.9
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	96.82
KOG3771|consensus	460		96.72
smart00287	63	SH3b Bacterial SH3 domain homologues.	96.45
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	96.32
KOG3725|consensus	375		96.3
KOG4429|consensus	421		96.29
KOG3775|consensus	482		96.16
KOG1451|consensus	812		96.06
PRK10884	206	SH3 domain-containing protein; Provisional	95.96
KOG0199|consensus	1039		95.7
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	95.69
KOG3565|consensus	640		95.66
KOG4792|consensus	293		95.32
KOG0040|consensus	2399		95.1
KOG3632|consensus	1335		93.12
PF06347	55	SH3_4: Bacterial SH3 domain; InterPro: IPR010466 S	92.67
COG3103	205	SH3 domain protein [Signal transduction mechanisms	92.34
PRK13914	481	invasion associated secreted endopeptidase; Provis	91.51
KOG3812|consensus	475		88.29

>KOG4226|consensus

Probab=99.66  E-value=9.6e-17  Score=126.11  Aligned_cols=88  Identities=26%  Similarity=0.516  Sum_probs=75.7

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeeeccC------C----------
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKKLS------N----------   68 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~~~~------~----------   68 (143)
                      .|+|||.|+...+.  ||+|.+||.+.|+++-  +++||++|+..|+.|+||.|||..+....      .          
T Consensus       193 vVvaLYsFsssnde--ELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~ts~~~~~s~~pq~sgn  270 (379)
T KOG4226|consen  193 VVVALYSFSSSNDE--ELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDGPSTSKALHPSHAPQISGN  270 (379)
T ss_pred             EEEEEecccCCChh--hcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccCccccccCCccccccccCC
Confidence            47899999977777  9999999999999885  77999999999999999999999863211      0          


Q ss_pred             ---------CCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         69 ---------GNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        69 ---------~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                               +..||.++|+|.|||..|-..|-+ |.|+
T Consensus       271 ~p~~sg~~ag~~WYyG~itR~qae~~Ln~hG~e-GdFL  307 (379)
T KOG4226|consen  271 GPSSSGRFAGRPWYYGNITRHQAECALNEHGHE-GDFL  307 (379)
T ss_pred             CCCccccccCCcceeccccHHHHHHHHhccCcc-CceE
Confidence                     016999999999999999888888 9998

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.63  E-value=5.8e-16  Score=93.09  Aligned_cols=49  Identities=29%  Similarity=0.704  Sum_probs=43.8

Q ss_pred             EeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCcee
Q psy11791         10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus        10 alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      |+|||.++..+  ||+|++||.|.|+.+.+++||.+++ +|+.|+||++||+
T Consensus         1 Al~~y~~~~~d--ELs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEAQDPD--ELSFKKGDVITVLEKSDDGWWYGRN-TGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCSSSTT--B-EB-TTEEEEEEEESSTSEEEEEE-TTEEEEEEGGGEE
T ss_pred             CCccCCCCCcC--EeeEcCCCEEEEEEeCCCCEEEEEE-CCEEEEECHHhCC
Confidence            78999987777  9999999999999998999999998 9999999999995

...

>KOG0197|consensus

Probab=99.62  E-value=1.1e-16  Score=134.22  Aligned_cols=126  Identities=22%  Similarity=0.413  Sum_probs=97.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCE-EEEEecCCCCceEEEeC-CCceEEEcCCceeeee---c--cCCCCCCcccCCC
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEK-LFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK---K--LSNGNRNNVENIN   78 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~-l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~---~--~~~~~~w~~~~i~   78 (143)
                      ..++|+|||.+....  +|+|.+|++ +.+++..+.+||+++.. .|.+||||+|||....   .  ..+...||.++|+
T Consensus        12 ~~~valyd~~s~~~~--dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~is   89 (468)
T KOG0197|consen   12 TIVVALYDYASRTPE--DLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKIS   89 (468)
T ss_pred             ceEEEeccccCCCcc--ccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhcccc
Confidence            368999999876655  999999999 88888888999999886 6899999999999752   1  1122369999999


Q ss_pred             ccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----------cCcccccccCCCCCCCCccCC
Q psy11791         79 PTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----------QKPKVAKRTIFPVIPSYENIP  134 (143)
Q Consensus        79 r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----------~~~~l~e~~~f~~ip~li~~~  134 (143)
                      |.+||++|+.+++..|+|+             ||.+...+. ++..|+           ..+.++++++|++|++|++--
T Consensus        90 R~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~-~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~~  168 (468)
T KOG0197|consen   90 REEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGG-LGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNYY  168 (468)
T ss_pred             HHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccC-CccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhhh
Confidence            9999988888877779999             555554331 222332           233389999999999887643

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.48  E-value=9.2e-14  Score=85.11  Aligned_cols=53  Identities=23%  Similarity=0.579  Sum_probs=45.6

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEE-ecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLI-KKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl-~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      +++|++||.+...+  +|+|++||++.|+ ++.+.+||.++. +|+.|+||++||++
T Consensus         1 ~~~a~~d~~~~~~~--~Ls~~~Gd~i~v~~~~~~~~ww~~~~-~g~~G~~P~~~v~~   54 (55)
T PF07653_consen    1 YYRAIFDYVAEDPD--ELSFKKGDVIEVLGEKDDDGWWLGEN-NGRRGWFPSSYVEE   54 (55)
T ss_dssp             EEEESSSBESSSTT--B-EB-TTEEEEEEEEECSTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CEEEeEEECCCCCC--ceEEecCCEEEEEEeecCCCEEEEEE-CCcEEEEcHHHEEE
Confidence            47899999866555  9999999999999 777889999999 99999999999986

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.47  E-value=8.4e-14  Score=83.01  Aligned_cols=47  Identities=34%  Similarity=0.773  Sum_probs=41.9

Q ss_pred             EEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcC
Q psy11791          9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPA   57 (143)
Q Consensus         9 ~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPs   57 (143)
                      +|+|||.++..+  +|+|++||.+.|+++.+.+||.+++.. |++|+||+
T Consensus         1 ~Alydf~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAEDPD--ELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETSSTT--BSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCCCCC--EEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence            699999977766  999999999999999988999999976 69999996

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG2199|consensus

Probab=99.41  E-value=4.3e-14  Score=115.66  Aligned_cols=54  Identities=17%  Similarity=0.507  Sum_probs=49.4

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .|+|||||++...+  ||+|++||+|.|++..+++||+|++ .+..|+||+|||+..
T Consensus       217 kVRALYDFeAaE~n--ELsFkaGdIItVLd~s~~~WWKG~~-~~~~GlFPsnfVT~~  270 (462)
T KOG2199|consen  217 KVRALYDFEAAEDN--ELSFKAGDIITVLDDSDPNWWKGEN-HRGIGLFPSNFVTAD  270 (462)
T ss_pred             hhhhhhcccccCCC--ccceecCcEEEEcccCCcchhcccc-CCcccccchhhhhhh
Confidence            48999999977777  9999999999999999999999998 778899999999863

>smart00326 SH3 Src homology 3 domains

Probab=99.36  E-value=3.2e-12  Score=77.05  Aligned_cols=55  Identities=25%  Similarity=0.601  Sum_probs=48.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..++|+|||.+...+  +|+|++||.+.++...+.+||.++...++.|+||++|++.
T Consensus         3 ~~~~a~~~~~~~~~~--~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~   57 (58)
T smart00326        3 PQVRALYDYTAQDPD--ELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEE   57 (58)
T ss_pred             cEEEEeeeeCCCCCC--CCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEE
Confidence            467899999876666  9999999999999998889999998669999999999975

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.34  E-value=3.5e-12  Score=76.03  Aligned_cols=52  Identities=29%  Similarity=0.662  Sum_probs=46.7

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCcee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      ++|+|+|.+...+  +|+|++||.+.++...+.+||.+++..++.|+||.+|++
T Consensus         2 ~~a~~~~~~~~~~--~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~   53 (54)
T cd00174           2 VRALYDYDARDPD--ELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE   53 (54)
T ss_pred             EEEEEeeCCCCCC--CCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence            6799999877766  999999999999998788999999866699999999986

>KOG1029|consensus

Probab=99.25  E-value=2.9e-12  Score=111.94  Aligned_cols=56  Identities=23%  Similarity=0.597  Sum_probs=51.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +.|.|+|||+++.+|  ||+|.+|++|.|+++++++||++.. +|..|+||+|||....
T Consensus      1054 ~qviamYdY~AqndD--ELsF~kgdiI~VlnkdepeWW~Ge~-ng~sGLFPSNYV~k~t 1109 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQNDD--ELSFKKGDIINVLNKDEPEWWSGER-NGKSGLFPSNYVQKQT 1109 (1118)
T ss_pred             ceeEEeeccccCCcc--cccccCCCEEEecCCCChhhhcccc-cCccccCccccccccc
Confidence            468899999988888  9999999999999999999999987 8999999999996654

>KOG1118|consensus

Probab=99.20  E-value=6.7e-12  Score=100.10  Aligned_cols=59  Identities=24%  Similarity=0.527  Sum_probs=53.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      +.++|+|+|||+++..+  ||.|++||+|.|++..+++||.++. .|..|+||.|||+.+.+
T Consensus       305 ~~p~cralYdFepenEg--EL~fkeGDlI~l~~QIdenWyeG~~-~g~sG~FPvnYv~vlvp  363 (366)
T KOG1118|consen  305 DQPCCRALYDFEPENEG--ELDFKEGDLITLTNQIDENWYEGEK-HGESGMFPVNYVEVLVP  363 (366)
T ss_pred             cchhheeeeccCCCCCC--ccCcccCceeeehhhcCcchhhhee-cCccCccccceeEEecc
Confidence            34579999999977777  9999999999999999999999998 89999999999998764

>KOG4792|consensus

Probab=99.14  E-value=1.1e-11  Score=95.55  Aligned_cols=61  Identities=28%  Similarity=0.592  Sum_probs=53.5

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      +...+++|+|||.....+  +|.|++|++|.|+++.++.||.+|+..|+.|+||.+||+....
T Consensus       122 ~~~~~vr~~fdF~G~dee--DLPFkkGeiL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~  182 (293)
T KOG4792|consen  122 EEAEYVRALFDFNGNDEE--DLPFKKGEILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYRP  182 (293)
T ss_pred             hhhhheeeeeccCCCccc--cCCcccCcEEEEecCcHHHhhhhhccCCcccceechHHHhhhh
Confidence            345678999999855555  9999999999999999999999999999999999999998643

>KOG4278|consensus

Probab=99.14  E-value=6.1e-11  Score=102.96  Aligned_cols=85  Identities=24%  Similarity=0.407  Sum_probs=71.9

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCccccccc
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTR   85 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~l   85 (143)
                      .++|||||-+..++  .|++.+||.+.||.-. +..|..+|.++|+ ||||+||+.....++.. .||.+.++|+.||-+
T Consensus        92 LFVALYDFvasGdn--tLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvNSLeKh-sWYHGpvSRsaaEy~  167 (1157)
T KOG4278|consen   92 LFVALYDFVASGDN--TLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVNSLEKH-SWYHGPVSRSAAEYI  167 (1157)
T ss_pred             eeEeeeeeeccccc--eeeeecCceEEEeeecCCCcceeecccCCC-ccccccccccccchhhc-ccccCccccchhhhh
Confidence            57899999987777  9999999999999876 6679999987887 99999999988765544 499999999999987


Q ss_pred             cCcCCCCCCceE
Q psy11791         86 SYSEGNDKGGFV   97 (143)
Q Consensus        86 l~~~g~~~G~F~   97 (143)
                      |- .|-. |.|+
T Consensus       168 Ls-SgIn-GSFL  177 (1157)
T KOG4278|consen  168 LS-SGIN-GSFL  177 (1157)
T ss_pred             hh-cCcc-cceE
Confidence            74 3443 8898

>KOG2070|consensus

Probab=99.05  E-value=1e-10  Score=98.29  Aligned_cols=56  Identities=20%  Similarity=0.531  Sum_probs=50.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..|+|.|.|..+..|  ||+|.+||+|+|....+.+||.+.. +|++||||+|||.++.
T Consensus        18 LvvrAkf~F~gsNnD--ELsf~KgDvItVTq~eeGGWWEGTl-ng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   18 LVVRAKFNFQGSNND--ELSFSKGDVITVTQVEEGGWWEGTL-NGRTGWFPSNYVREIK   73 (661)
T ss_pred             eEEEEEeecccCCCc--eeccccCCEEEEEEeccCcceeccc-cCccCccchHHHHHHh
Confidence            458999998866666  9999999999999999999999987 9999999999999876

>KOG4226|consensus

Probab=99.01  E-value=4.4e-10  Score=88.80  Aligned_cols=55  Identities=18%  Similarity=0.480  Sum_probs=48.0

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      +++.|.|.++..+  ||++.+|..++|++++.++||++.. +|+.||||+|||++...
T Consensus       110 AvVKf~Y~a~~eD--ELsLtKGtrv~vmEKssDGWWrG~~-ng~VGWFPSNYv~E~~d  164 (379)
T KOG4226|consen  110 AVVKFNYVAERED--ELSLTKGTRVTVMEKSSDGWWRGSY-NGQVGWFPSNYVTEEVD  164 (379)
T ss_pred             eEEEEeecccccc--ccccccCcEEEEEEeccCcceeccc-CCeeccccccceehhcc
Confidence            5566777666666  9999999999999999999999988 99999999999998653

>KOG0162|consensus

Probab=98.99  E-value=2.7e-10  Score=99.51  Aligned_cols=54  Identities=22%  Similarity=0.481  Sum_probs=49.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..|.|+|||.++..+  ||+|++||++.|+.++..+||.++. +|++|+||.+||++
T Consensus      1052 p~~~A~Y~y~gq~~d--Els~~~~diIei~~edpSGWw~gk~-~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVD--ELSFKKGDIIEIMREDPSGWWLGKL-NGKEGLFPGNYVTE 1105 (1106)
T ss_pred             cceeeeccCCCCCcc--cccccCCCEEEEeccCCCcchhhcc-CCcccccccccccc
Confidence            568999999977555  9999999999999999999999996 99999999999975

>KOG0515|consensus

Probab=98.95  E-value=3e-10  Score=96.41  Aligned_cols=55  Identities=27%  Similarity=0.727  Sum_probs=48.0

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCC---CceEEEeCCCceEEEcCCceeeeec
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK---DWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~---~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      +.|||||+++-.|  ||+|+.||.++||.+++.   +||+++. +|++||||.||+-....
T Consensus       686 vYAlwdYeaqf~D--ELsf~eGd~lTvirr~d~~eteWWwa~l-ng~eGyVPRnylgLyPr  743 (752)
T KOG0515|consen  686 VYALWDYEAQFED--ELSFDEGDELTVIRRDDEVETEWWWARL-NGEEGYVPRNYLGLYPR  743 (752)
T ss_pred             eEEeecccccccc--cccccCCceeEEEecCCcchhhhhhHhh-cCcccccchhhhhcCcc
Confidence            5699999977777  999999999999998644   7999995 99999999999976653

>KOG4225|consensus

Probab=98.95  E-value=6.7e-10  Score=92.15  Aligned_cols=55  Identities=25%  Similarity=0.629  Sum_probs=51.5

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ++|+|+|.++...  ||+|++||+++|+.+.|.+|..|.. +|+.|+||+|||+.++.
T Consensus       233 aralf~F~~qt~k--EL~~~kGDIVyI~rkvD~nWyeGEh-hGr~GifP~sYvE~~~~  287 (489)
T KOG4225|consen  233 ARALFDFEAQTPK--ELPFNKGDIVYILRKVDQNWYEGEH-HGRVGIFPASYVEILTP  287 (489)
T ss_pred             hhheeccccCCcc--ccccCCCCEEEEEeeccCceeeeee-cceecceechheeecCc
Confidence            6899999988887  9999999999999999999999998 99999999999998764

>KOG2856|consensus

Probab=98.89  E-value=3.7e-10  Score=92.09  Aligned_cols=55  Identities=27%  Similarity=0.502  Sum_probs=47.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      +.|+|||||.....+  ||+|++||.|..+.+. ..+|.++|...|+.|++|+|||+-
T Consensus       415 v~vraLYDY~gqE~D--ElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~  470 (472)
T KOG2856|consen  415 VRVRALYDYAGQEGD--ELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVEC  470 (472)
T ss_pred             eeEEeeeccCccccc--chhhccccHhhhcCCccccccccccccCCcccccchhhhhc
Confidence            568999999866666  9999999999988775 458999998779999999999974

>KOG2996|consensus

Probab=98.79  E-value=3.5e-09  Score=90.77  Aligned_cols=54  Identities=24%  Similarity=0.493  Sum_probs=44.5

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ++|-|||.+....  +|||++||++.|+++.  +.+||+++. +|+.||||++||++..
T Consensus       808 AvarYdf~ard~~--eLSlk~GDvV~i~~k~g~d~GWWkGev-ngrvGwFPstYVee~~  863 (865)
T KOG2996|consen  808 AVARYDFCARDMR--ELSLKEGDVVKIYDKVGEDQGWWKGEV-NGRVGWFPSTYVEEDD  863 (865)
T ss_pred             eeeccccCCCchh--hcccccCCEEEEehhccccCceeccee-cCcccccccccccccC
Confidence            4556676654444  9999999999999886  468999997 9999999999998753

>KOG3601|consensus

Probab=98.79  E-value=5.4e-10  Score=85.09  Aligned_cols=96  Identities=14%  Similarity=0.224  Sum_probs=77.1

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCcccccccc
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRS   86 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll   86 (143)
                      +.+++||.+...+  ||+|.+|+.+.+++.. +.+|.++.. .|..|++|.||+....     ..|+.+.++|..+|.+|
T Consensus         3 a~a~n~f~a~i~d--ELsFlkg~~lk~l~~~d~~nw~~ael-~g~~g~~P~Nai~~~~-----~~wve~~i~r~~ae~~l   74 (222)
T KOG3601|consen    3 AVAKNDFLAGIRD--ELSFLKGDNLKILNMEDDINWYKAEL-DGPEGFIPKNAIRMKP-----HEWVEGLIPRPLAEDLL   74 (222)
T ss_pred             hhhhhhhhhcCcc--cceeecCCceEecchHHhhhhhhHhh-cCccccCccccccccc-----ccceecccccchhhhhh
Confidence            4678999888888  9999999999999875 447988876 9999999999996532     24999999999999988


Q ss_pred             CcCCCCCCceEEEeceecccCCCceec
Q psy11791         87 YSEGNDKGGFVSVKDRAISIDNNSSIK  113 (143)
Q Consensus        87 ~~~g~~~G~F~sv~~~~~~~~~~~~vk  113 (143)
                      +.  +..|+|+...+++--.+..++++
T Consensus        75 ~~--~~~G~fl~r~s~sSPg~fsgsvr   99 (222)
T KOG3601|consen   75 SK--KRDGDFLIRLSESSPGDFSGSVR   99 (222)
T ss_pred             hc--cCcchhhhhhhhcCccccccccc
Confidence            65  66699997777654335666664

>KOG1264|consensus

Probab=98.75  E-value=3.1e-09  Score=93.85  Aligned_cols=60  Identities=25%  Similarity=0.488  Sum_probs=53.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      .++.|+|||||.++..+  ||+|.+|-+|..+.++..+||+++..+...+|||+|||+++..
T Consensus       773 ~~vt~kAL~~Yka~r~D--ELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  773 PQVTVKALYDYKAKRSD--ELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             cchhhhhhhccccCCcc--cccccccceeEeeeccCCceeecccccceeeeccHHHhhhhcc
Confidence            35679999999988888  9999999999999999889999998445789999999998753

>KOG4348|consensus

Probab=98.70  E-value=5.8e-08  Score=81.06  Aligned_cols=57  Identities=26%  Similarity=0.544  Sum_probs=51.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .-+|+++|.|+++.++  ||.|+.||++.+|.++  +.+||.+.. +|+.|.||.|||+.+.
T Consensus       261 Keycrv~F~Ye~qndD--ELt~KEgdil~lItK~cgdaGWweGEL-nGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  261 KEYCRVKFVYEPQNDD--ELTLKEGDILILITKNCGDAGWWEGEL-NGKKGVFPDNFVELVQ  319 (627)
T ss_pred             hhheeeeeeecCCCcc--ceeeccccEEEEecccccccceeeeee-cCccccCCchhhhhcC
Confidence            3479999999988888  9999999999999886  558999987 9999999999998765

>KOG4348|consensus

Probab=98.68  E-value=4.5e-09  Score=87.58  Aligned_cols=60  Identities=20%  Similarity=0.401  Sum_probs=53.3

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      .+...|+++|.|..+.++  ||.|+.||+|.|+.+..++||.+.. +|+.|+||+|||.+++.
T Consensus        98 ~~~r~c~v~f~Y~pqndD--ELelkVGDiIeli~eVEeGWw~G~L-ngk~GmFPsNFVkel~~  157 (627)
T KOG4348|consen   98 PQARICVVTFAYSPQNDD--ELELKVGDIIELISEVEEGWWKGKL-NGKVGMFPSNFVKELPT  157 (627)
T ss_pred             ccceeEEEEEeecCCCCc--eeeeeeccHHHhhhHhhhhhhhcee-cCcccccchhhceecCC
Confidence            345679999998877777  9999999999999999999999987 89999999999999754

>KOG3557|consensus

Probab=98.63  E-value=1.1e-08  Score=88.42  Aligned_cols=59  Identities=25%  Similarity=0.556  Sum_probs=51.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeecc
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~~   66 (143)
                      ..+++++|||.+....  ||++.+||++.|+++ ...||++++..|+.||||+|.+..+...
T Consensus       500 ~k~~~~~Ydf~arNs~--ELsV~k~E~LEvl~d-~R~WW~~kn~~G~~GyvP~nIL~~~~~~  558 (721)
T KOG3557|consen  500 KKWVLVLYDFQARNSS--ELSVKKGEVLEVLDD-GRKWWKVKNGHGRAGYVPSNILAPLQPE  558 (721)
T ss_pred             ceeeeeehhhhcccch--hhhhhhhhhhhhhhc-cccceeccCccCCCCCcchhhhccCCCc
Confidence            3478899999877666  999999999999976 5689999999999999999999887543

>KOG3875|consensus

Probab=98.60  E-value=3.7e-09  Score=84.65  Aligned_cols=58  Identities=21%  Similarity=0.424  Sum_probs=48.2

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-----CCceEEEeC-CCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-----KDWWQVIRS-SGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-----~~WW~~r~~-~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||.+...  .||+|++||.|.|+.+++     .+||..+.. .|.+|+||.|||+.+..
T Consensus       269 ~~arA~YdF~a~np--~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  269 EFARALYDFVARNP--VELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHHhhhhcCCH--HHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            45789999886555  599999999999988763     359999987 55889999999998764

>KOG2546|consensus

Probab=98.52  E-value=4.8e-08  Score=81.08  Aligned_cols=54  Identities=28%  Similarity=0.632  Sum_probs=48.8

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      |+++|||++...+  ||+|.+|-+|+|+.+.+++||.+-. +|.+|+||.|||+.+.
T Consensus       426 Vv~iydy~~~Kdd--eLsf~E~ailyv~kknddgw~EgV~-~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  426 VVAIYDYTADKDD--ELSFAEGAILYVLKKNDDGWYEGVQ-DGVTGLFPGNYVEPLK  479 (483)
T ss_pred             HHhhccccccccc--ccccccccEEEEEEecCCcchhhee-cCcceeccCccccccc
Confidence            6789999877777  9999999999999999999999876 8899999999998764

>KOG1029|consensus

Probab=98.50  E-value=6.8e-08  Score=85.10  Aligned_cols=59  Identities=22%  Similarity=0.482  Sum_probs=49.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeeeccC
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~~~~   67 (143)
                      +.|+|||.|+++..+  |++|..||+|.|-.+.  .++|.-+.. .|+.||||.|||+.+...+
T Consensus       694 vkyrAly~FeaRs~d--Eisf~pGDII~V~esq~aEPGWlaGel-~gktGWFPenyvEki~~~e  754 (1118)
T KOG1029|consen  694 VKYRALYPFEARSHD--EISFEPGDIIIVFESQAAEPGWLAGEL-RGKTGWFPENYVEKIPAVE  754 (1118)
T ss_pred             EEEeeecccccCCcc--cccccCCCEEEEehhccCCccccccee-ccccCcCcHHHHhhcccCC
Confidence            568999999988888  9999999999887664  457766655 9999999999999876544

>KOG4225|consensus

Probab=98.48  E-value=9.9e-08  Score=79.44  Aligned_cols=52  Identities=25%  Similarity=0.530  Sum_probs=47.2

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEE--EeCCCceEEEcCCceee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYVEV   62 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~--r~~~g~~G~vPsnyv~~   62 (143)
                      ++|||.|.++..+  ||.|+.||+|.|+++.+++|.-+  ++ .|+-|.||.|||+.
T Consensus       435 yrAly~Y~pqned--eLEl~egDii~VmeKcddgWfvGts~r-tg~fGtFPgnyV~~  488 (489)
T KOG4225|consen  435 YRALYSYRPQNED--ELELREGDIIDVMEKCDDGWFVGTSRR-TGKFGTFPGNYVKR  488 (489)
T ss_pred             ceeccccCCCCch--hheeccCCEEeeeecccCcceecccee-cccccccCcccccc
Confidence            7999999877777  99999999999999999999988  54 78999999999974

>KOG3655|consensus

Probab=98.46  E-value=4.8e-08  Score=81.91  Aligned_cols=56  Identities=25%  Similarity=0.547  Sum_probs=49.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||++-.+  .+++|..++.|.+|+..+.+||+++-.+|..|+||+|||+.+
T Consensus       428 q~A~A~~dyqAAdd--tEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  428 QTARALYDYQAADD--TEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             CCccccccccccCC--cccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence            34789999885544  599999999999999999999999988999999999999753

>KOG1843|consensus

Probab=98.42  E-value=1.2e-07  Score=78.48  Aligned_cols=53  Identities=28%  Similarity=0.567  Sum_probs=46.5

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCC--CceEEEeCCCceEEEcCCceee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK--DWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~--~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      .++|+|+|..+..+  +|+|++||+|.+|++.+.  +||+++. ++.+|++|+|||+.
T Consensus       418 ~a~a~ysfage~~G--Dl~f~kgDii~il~ks~s~~dwwtgr~-~~~egifPanyv~~  472 (473)
T KOG1843|consen  418 IATALYSFAGEQPG--DLSFQKGDIITILKKSDSANDWWTGRG-NGYEGIFPANYVSL  472 (473)
T ss_pred             eeeeeehhccCCCC--CcccccCceEEEecCCcchhhHHHhhc-cccccccccceecc
Confidence            58899999866655  999999999999999754  7999987 99999999999963

>KOG3601|consensus

Probab=98.33  E-value=2.8e-07  Score=70.41  Aligned_cols=56  Identities=21%  Similarity=0.466  Sum_probs=49.8

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++.|+|||.+....  +|.|+.|+.+.+++.++..||.++. .|+.|+||++||...
T Consensus       163 ~~yqQa~~df~~~pp~--ql~f~~gq~~~v~~~ss~~ww~Gs~-lg~agiFpagyv~p~  218 (222)
T KOG3601|consen  163 NYYQQALYDFQPQPPG--QLAFRRGQQIQVLDSSSPFWWFGSK-LGRAGIFPAGYVAPS  218 (222)
T ss_pred             chhhhhcCCCCCCCch--hhccccCCcceeecCCCcchhhccc-cCceeeecCcccccc
Confidence            3467899999876666  9999999999999999999999987 899999999999753

>KOG2996|consensus

Probab=98.14  E-value=4.9e-07  Score=77.92  Aligned_cols=107  Identities=17%  Similarity=0.259  Sum_probs=72.8

Q ss_pred             CceecCCCCEEEEEecC-CCCceEEEeCC-CceEEEcCCceeeeeccCCCC----------CCcccCCCccccccccCcC
Q psy11791         22 KYVRIQEGEKLFLIKKT-NKDWWQVIRSS-GKPFYVPASYVEVYKKLSNGN----------RNNVENINPTMEKTRSYSE   89 (143)
Q Consensus        22 ~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~-g~~G~vPsnyv~~~~~~~~~~----------~w~~~~i~r~~~e~ll~~~   89 (143)
                      --|.++.|+++.++.-+ ...||.+|+.. +..|+||++-|........++          .||++.|.|++||..|.  
T Consensus       625 P~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~MERaqaes~Lk--  702 (865)
T KOG2996|consen  625 PRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGEMERAQAESTLK--  702 (865)
T ss_pred             CceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcchHhhhhhhhHhh--
Confidence            36889999999988765 55799999854 478999999998754333211          69999999999999884  


Q ss_pred             CCCCCceE---EEe---ceeccc----CCCceec-cCcc---cccccCCCCCCCC
Q psy11791         90 GNDKGGFV---SVK---DRAISI----DNNSSIK-QKPK---VAKRTIFPVIPSY  130 (143)
Q Consensus        90 g~~~G~F~---sv~---~~~~~~----~~~~~vk-~~~~---l~e~~~f~~ip~l  130 (143)
                      +...|.|+   +..   .-++++    +-++.+- ++-.   ++|++.|+|.-+|
T Consensus       703 ~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~EL  757 (865)
T KOG2996|consen  703 NRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVEL  757 (865)
T ss_pred             cCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHH
Confidence            45558898   211   122332    2222111 2222   7999999887655

>KOG0609|consensus

Probab=97.99  E-value=2.2e-06  Score=73.12  Aligned_cols=58  Identities=24%  Similarity=0.534  Sum_probs=48.2

Q ss_pred             eEEEEeeccCCCCCC-----CCceecCCCCEEEEEecCCCCceEEEeCC----CceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIRSS----GKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~-----~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~----g~~G~vPsnyv~~~   63 (143)
                      ++++|+|||+...++     +-.|+|++||++.|++++|..||+++...    +..|+||+....+.
T Consensus       215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qer  281 (542)
T KOG0609|consen  215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQER  281 (542)
T ss_pred             eeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHHH
Confidence            678999999865543     25689999999999999999999998742    57899999887764

>KOG1702|consensus

Probab=97.97  E-value=6.8e-06  Score=62.81  Aligned_cols=55  Identities=22%  Similarity=0.463  Sum_probs=45.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~   62 (143)
                      ...+|.|||.++..+  +++|+-||.|.-+...+++|..+.. ..|.+|..|+||++.
T Consensus       208 ktyra~ydysaqded--evsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~  263 (264)
T KOG1702|consen  208 KTYRAFYDYSAQDED--EVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF  263 (264)
T ss_pred             ccchhhccCcccCcc--eeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence            347899998866655  9999999999989888889866543 368999999999974

>KOG2528|consensus

Probab=97.62  E-value=2e-05  Score=66.02  Aligned_cols=56  Identities=32%  Similarity=0.501  Sum_probs=49.2

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|+|||......  +|++..||++.+...+ .++||.+++..|..|+||+.||+...
T Consensus         4 k~RamyDf~~E~~s--Elsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~   60 (490)
T KOG2528|consen    4 KARAMYDFQSEGHS--ELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR   60 (490)
T ss_pred             chhhhcchhhcccc--cccccccceeeecCcccccccccCCCccCccCCCcccceeeec
Confidence            46899999866555  9999999999999886 56899999999999999999999864

>KOG3632|consensus

Probab=97.51  E-value=0.0001  Score=67.01  Aligned_cols=58  Identities=14%  Similarity=0.255  Sum_probs=47.2

Q ss_pred             EEEEeeccCCCCCC------CCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          7 TLKVLYDFDYSTKD------GKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         7 ~~~alydf~~~~~~------~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      .++|||||+.....      +-||+|++|++|.|+.+. .++.++++. +|+.|+||+|+|.+...
T Consensus      1140 ifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~-ngr~GlIPcNmvae~~v 1204 (1335)
T KOG3632|consen 1140 IFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGEL-NGRRGLIPCNMVAEQPV 1204 (1335)
T ss_pred             eeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeeccc-ccccccccccccccccC
Confidence            57899999764322      258999999999999775 457888886 99999999999998764

>KOG3523|consensus

Probab=97.34  E-value=2.6e-05  Score=67.57  Aligned_cols=56  Identities=20%  Similarity=0.386  Sum_probs=48.5

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      +|.+...|.+...|  +|++..+|++.|+.+..+||..|.+. +|..||||..|++++.
T Consensus       610 Qv~~~~sy~a~q~D--el~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~  666 (695)
T KOG3523|consen  610 QVQCVHSYKAKQPD--ELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEIT  666 (695)
T ss_pred             hhheeeccccCCCc--eeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhc
Confidence            46677787766666  99999999999999999999998764 6899999999999875

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=97.34  E-value=0.00031  Score=46.74  Aligned_cols=44  Identities=32%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             CCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791         20 DGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus        20 ~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      +..+|.+++||.+.||+..+.+-|.+|+..|+-||||.+++...
T Consensus        29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~   72 (89)
T PF14603_consen   29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPL   72 (89)
T ss_dssp             -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS---
T ss_pred             CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCC
Confidence            34699999999999999999999999999999999999998654

>KOG2222|consensus

Probab=97.30  E-value=4.7e-05  Score=64.87  Aligned_cols=54  Identities=22%  Similarity=0.403  Sum_probs=47.0

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .++||.||....++  +|.|+++|+++|+...+.+.|.++. +|-.||||+.||+.+
T Consensus       550 rakal~df~r~ddd--elgfrkndiitiisekdehcwvgel-nglrgwfpakfvell  603 (848)
T KOG2222|consen  550 RAKALHDFAREDDD--ELGFRKNDIITIISEKDEHCWVGEL-NGLRGWFPAKFVELL  603 (848)
T ss_pred             HHHHHhhhhhcccc--ccccccccEEEEeecCCcceeeecc-ccccccchHHHHHHH
Confidence            36789999754455  9999999999999998999999986 999999999999864

>KOG4773|consensus

Probab=96.98  E-value=0.00012  Score=59.81  Aligned_cols=56  Identities=23%  Similarity=0.395  Sum_probs=48.2

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeecc
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~~   66 (143)
                      ..|++||......  ||.|..|+++.++.+++.+||.+.. .|..||+|.+|+..+...
T Consensus       178 ~~a~~df~gns~~--EL~l~agdV~~~~~r~ek~W~~gk~-R~~~g~yp~sF~~~ld~f  233 (386)
T KOG4773|consen  178 AEASFDFPGNSKL--ELNLVAGDVEFLLSRDEKYWLLGKV-RGLTGYYPDSFVKQLDDF  233 (386)
T ss_pred             HHhhccCCCCccc--eeeeehhhHHHHHhhcccceeeeee-ccccccccHHhhhhhccC
Confidence            4578888766666  9999999999999999999999987 889999999999987543

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=96.94  E-value=0.0014  Score=39.19  Aligned_cols=39  Identities=26%  Similarity=0.568  Sum_probs=32.3

Q ss_pred             ceecCCCCEEEEEecCCCC-ceEEEeCCCceEEEcCCcee
Q psy11791         23 YVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus        23 eLs~~~Gd~l~vl~~~~~~-WW~~r~~~g~~G~vPsnyv~   61 (143)
                      --.+..|+.+.++.....+ |.+++..+|..|||++.||+
T Consensus        16 i~~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   16 IGQLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEEEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred             hEEEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence            3467899999999987555 99997778999999999984

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG4575|consensus

Probab=96.90  E-value=0.0011  Score=58.18  Aligned_cols=56  Identities=14%  Similarity=0.439  Sum_probs=43.2

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      +.++|+|-+..+..+  +|-|..||+++++.-.+.-||-.+.. ....|+||+|||.-+
T Consensus         9 ~~vrA~y~w~ge~eG--dl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcL   65 (874)
T KOG4575|consen    9 CMVRALYAWPGEREG--DLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCL   65 (874)
T ss_pred             ceEEeeccCCCCccc--ccceecccceeEEeeccceeeeeeeecccccccCcccceeec
Confidence            468999997766666  99999999999987755555655544 347799999999543

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=96.82  E-value=8.7e-05  Score=47.56  Aligned_cols=60  Identities=13%  Similarity=0.145  Sum_probs=37.5

Q ss_pred             CcccCCCccccccccCcCCCCCCceE---EEec---eeccc-CCCceec------cCc--ccccccCCCCCCCCcc
Q psy11791         72 NNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISI-DNNSSIK------QKP--KVAKRTIFPVIPSYEN  132 (143)
Q Consensus        72 w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~-~~~~~vk------~~~--~l~e~~~f~~ip~li~  132 (143)
                      ||.++|+|.+|+++|.+ +...|+|+   |-..   -.+.+ .++...+      .+.  .+.....|+||++||.
T Consensus         1 W~~g~isr~~Ae~~L~~-~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~   75 (77)
T PF00017_consen    1 WFHGFISRQEAERLLMQ-GKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVE   75 (77)
T ss_dssp             TBEESSHHHHHHHHHHT-TSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHh-cCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHH
Confidence            89999999999999988 66669999   1100   01111 1111111      111  2667777999998874

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG3771|consensus

Probab=96.72  E-value=0.00076  Score=57.03  Aligned_cols=53  Identities=15%  Similarity=0.132  Sum_probs=39.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCcee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      ..|+++|||.++..+  +|+|+.|++|.|+..++ .+||.++. -|..+-.|.+|+.
T Consensus       401 ~~v~a~~dy~a~~~d--eLsf~~gd~i~vi~s~~~~e~~eg~~-mg~ke~~~~~~~~  454 (460)
T KOG3771|consen  401 YKVKALHDYAAQDTD--ELSFEAGDVILVIPSDNPEEQDEGWL-MGVKESDWNGLFP  454 (460)
T ss_pred             cceeccccccccccc--cccccCCCEEEEecCCCccchhhHHH-hhhccccccccee
Confidence            358999999987777  99999999999998654 36888876 5544444455543

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=96.45  E-value=0.0081  Score=36.67  Aligned_cols=38  Identities=26%  Similarity=0.508  Sum_probs=31.5

Q ss_pred             ceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCce
Q psy11791         23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV   60 (143)
Q Consensus        23 eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv   60 (143)
                      --.+..|+.+.++...+.+|.+++...|..||||..++
T Consensus        24 ~~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~   61 (63)
T smart00287       24 IGTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV   61 (63)
T ss_pred             eEEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence            34578999999998865589999987799999987665

>smart00252 SH2 Src homology 2 domains

Probab=96.32  E-value=0.00075  Score=43.81  Aligned_cols=60  Identities=18%  Similarity=0.238  Sum_probs=37.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCc--c--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKP--K--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~--~--l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+|+++|...+  .|.||   |-..   -++.+--.+.++     .+.  .  +.....|++|++||+
T Consensus         2 ~w~~g~i~r~~Ae~lL~~~~--~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~   76 (84)
T smart00252        2 PWYHGFISREEAEKLLKNEG--DGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVE   76 (84)
T ss_pred             CeecccCCHHHHHHHHhcCC--CcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHH
Confidence            49999999999999998754  59998   1110   011110011221     222  1  555789999999885

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>KOG3725|consensus

Probab=96.30  E-value=0.0013  Score=52.31  Aligned_cols=54  Identities=26%  Similarity=0.437  Sum_probs=44.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEec--CCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~--~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..++++|||++...  +||++-..++|.|..-  .+.+|..+++ +++.|-+|..|++.
T Consensus       318 rkArVlyDYdAa~s--~ElslladeiitVyslpGMD~dwlmgEr-GnkkGKvPvtYlEL  373 (375)
T KOG3725|consen  318 RKARVLYDYDAALS--QELSLLADEIITVYSLPGMDADWLMGER-GNKKGKVPVTYLEL  373 (375)
T ss_pred             cceeeeecccccch--hhhhhhhcceEEEEecCCCChHHhhhhh-cCCCCCcchhHHHh
Confidence            45789999885544  4999999999988654  3678999987 77889999999864

>KOG4429|consensus

Probab=96.29  E-value=0.0012  Score=53.20  Aligned_cols=54  Identities=15%  Similarity=0.033  Sum_probs=47.1

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .|.|+|.|.++.++  +|...+|++..+-++...+||.++. .|.-|.+|+.||++.
T Consensus       365 lcdafYSfqarqdd--el~~e~gditif~Ekkeeg~~f~rl-~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  365 LCDAFYSFQARQDD--ELGGEIGDITIFDEKKEEGPTFCRL-LGDFEHFHAAEIEEA  418 (421)
T ss_pred             Hhhhhhcccccccc--ccCCcccceeeecCcccCCCceeee-ccccCCCcHHHHHHh
Confidence            47899999988888  9999999998777777889999987 888899999998765

>KOG3775|consensus

Probab=96.16  E-value=0.0028  Score=52.55  Aligned_cols=60  Identities=17%  Similarity=0.331  Sum_probs=49.3

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ++...-+|++.|-.+..+  ||-+..||-+.|-...++.|..+-+. .|+.|.||+.|+.++.
T Consensus       260 ~qe~THR~~~rFvPRHpD--ELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd  320 (482)
T KOG3775|consen  260 EQEQTHRAVFRFVPRHPD--ELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVD  320 (482)
T ss_pred             hhchhhhhhhhccCCCcc--eeeeecCCeeEeeecccchhhccccccccccccccceeEEecC
Confidence            344455788888877777  99999999998888878899998764 5899999999998865

>KOG1451|consensus

Probab=96.06  E-value=0.0057  Score=53.43  Aligned_cols=52  Identities=21%  Similarity=0.401  Sum_probs=39.8

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      +.++|.  ..+....+++|..|.++.-+..+ .++|..++. +|++|+||+|||+.
T Consensus       759 ~k~lyA--c~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtL-nGktglip~nyve~  811 (812)
T KOG1451|consen  759 VKTLYA--CTADHHSELSFEPGTIFTNVYESNEDGWLVGTL-NGKTGLIPSNYVEP  811 (812)
T ss_pred             ccceec--cCCCCcccccccCcceeeeecccCCCCceeeec-CCCcccCcccccCc
Confidence            456666  44555569999999999877755 556766665 99999999999975

>PRK10884 SH3 domain-containing protein; Provisional

Probab=95.96  E-value=0.0098  Score=45.72  Aligned_cols=41  Identities=17%  Similarity=0.364  Sum_probs=35.2

Q ss_pred             eecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCceeeee
Q psy11791         24 VRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        24 Ls~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      -++..|+.++|+...+ .+|.+++..+|++|||++.|+...+
T Consensus        48 ~~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p   89 (206)
T PRK10884         48 GTLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTP   89 (206)
T ss_pred             EEEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCc
Confidence            3577999999998764 5899999889999999999998654

>KOG0199|consensus

Probab=95.70  E-value=0.015  Score=52.20  Aligned_cols=53  Identities=17%  Similarity=0.211  Sum_probs=42.2

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCC-CceEEEeC-CCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRS-SGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~-~g~~G~vPsnyv~~   62 (143)
                      ..+++.||+.  ..+  .|.|++||.|.||+.+.. -||++.+. +++.|.||.+-|..
T Consensus       377 ~~a~~~~d~~--ep~--aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~  431 (1039)
T KOG0199|consen  377 AVARETYDSI--EPG--ALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTA  431 (1039)
T ss_pred             ceeeeecccc--CCC--ceeeccCCeEEEEecCCccceeeccccccceecccCcceeee
Confidence            3456777744  666  999999999999998754 69999764 56999999998883

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=95.69  E-value=0.0038  Score=40.97  Aligned_cols=25  Identities=12%  Similarity=0.029  Sum_probs=21.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+|+++|.+  ...|.||
T Consensus         1 ~w~~g~i~r~~Ae~~L~~--~~~G~FL   25 (94)
T cd00173           1 PWYHGPISREEAEELLKK--KPDGTFL   25 (94)
T ss_pred             CccccCCCHHHHHHHHhc--CCCceEE
Confidence            499999999999999987  3448888

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

>KOG3565|consensus

Probab=95.66  E-value=0.0026  Score=56.34  Aligned_cols=56  Identities=32%  Similarity=0.546  Sum_probs=47.5

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEE-eCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVI-RSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r-~~~g~~G~vPsnyv~~~   63 (143)
                      ..+.|+|.|++...+  ++++.+|+++.+++.+ +++|=++| ..+|..|++|.+|+...
T Consensus       579 ~~~~a~~~~~~~s~~--~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~  636 (640)
T KOG3565|consen  579 RTSKALYAFEGQSEG--TISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVT  636 (640)
T ss_pred             cceecccCcCCCCCC--ccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccc
Confidence            457889998877777  9999999999999887 66888888 45789999999999754

>KOG4792|consensus

Probab=95.32  E-value=0.023  Score=44.45  Aligned_cols=57  Identities=18%  Similarity=0.148  Sum_probs=45.3

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +++++.+--..+=+...|.+.+|+++.|....-.+-|.++. +|+.|.||-.||+...
T Consensus       229 ~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegEl-nGk~G~fPfThvrf~d  285 (293)
T KOG4792|consen  229 YARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGEL-NGKIGHFPFTHVRFTD  285 (293)
T ss_pred             heeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeeee-cCccccccceeEEeec
Confidence            34555554334445568999999999999988778999998 9999999999998754

>KOG0040|consensus

Probab=95.10  E-value=0.00032  Score=66.16  Aligned_cols=55  Identities=33%  Similarity=0.674  Sum_probs=47.5

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+.|+|||...+..  +.+.++||+++++...+.+||+++. ..+.|++|+.||+.+.
T Consensus       970 ~v~alyd~q~kSpr--ev~mKkgDvltll~s~nkdwwkve~-~d~qg~vpa~yvk~~~ 1024 (2399)
T KOG0040|consen  970 CVLALYDYQEKSPR--EVTMKKGDVLTLLNSINKDWWKVEV-NDRQGFVPAAYVKRLD 1024 (2399)
T ss_pred             HHHHHHHHHhcCHH--HHHHhhhhHHHHHhhcccccccchh-hhhcCcchHHHHHHhc
Confidence            35789998755555  9999999999999988999999998 7789999999998764

>KOG3632|consensus

Probab=93.12  E-value=0.25  Score=45.80  Aligned_cols=60  Identities=13%  Similarity=0.314  Sum_probs=47.7

Q ss_pred             EEEEeeccCC---C-CCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeecc
Q psy11791          7 TLKVLYDFDY---S-TKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (143)
Q Consensus         7 ~~~alydf~~---~-~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~~   66 (143)
                      .+.|.|.|..   . ...+.+|.+..|+.|+|.... .++.+.+....|+.|.+|+|||+.....
T Consensus       449 ~~~arySynPFegpNenpeaelpltAg~yiYiyGdmdEdgfyegeL~dgrrglvPsnFVe~v~d~  513 (1335)
T KOG3632|consen  449 PFTARYSYNPFEGPNENPEAELPLTAGYYIYIYGDMDEDGFYEGELRDGRRGLVPSNFVEVVTDT  513 (1335)
T ss_pred             eEEEEEeccCCcCCCCCCccccccccceEEEEecCCCccccceeeeecccccCCCchheEEeccc
Confidence            4688898754   1 122368999999999999875 4578899988999999999999987643

>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=92.67  E-value=0.24  Score=29.57  Aligned_cols=36  Identities=22%  Similarity=0.421  Sum_probs=29.5

Q ss_pred             ceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCce
Q psy11791         23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV   60 (143)
Q Consensus        23 eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv   60 (143)
                      -..+.+|..+.|+.. ..+|.+++ .+|..|||+.+.|
T Consensus        18 v~~l~~g~~v~v~~~-~~~W~~V~-~~g~~GWv~~~~l   53 (55)
T PF06347_consen   18 VARLEPGVPVRVIEC-RGGWCKVR-ADGRTGWVHKSLL   53 (55)
T ss_pred             EEEECCCCEEEEEEc-cCCeEEEE-ECCeEEeEEeeec
Confidence            456778999988855 67899999 6999999988765

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.

>COG3103 SH3 domain protein [Signal transduction mechanisms]

Probab=92.34  E-value=0.24  Score=38.07  Aligned_cols=40  Identities=20%  Similarity=0.378  Sum_probs=35.3

Q ss_pred             ecCCCCEEEEEecCCC-CceEEEeCCCceEEEcCCceeeee
Q psy11791         25 RIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        25 s~~~Gd~l~vl~~~~~-~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ++++|+.+.|+..++. +|-+++...|+.|+||+.++....
T Consensus        49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~   89 (205)
T COG3103          49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEP   89 (205)
T ss_pred             EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhcccc
Confidence            6889999999998755 799999999999999999888754

>PRK13914 invasion associated secreted endopeptidase; Provisional

Probab=91.51  E-value=0.35  Score=41.67  Aligned_cols=40  Identities=20%  Similarity=0.411  Sum_probs=34.0

Q ss_pred             eecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791         24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus        24 Ls~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      =++.+|+.+.|+...+.+|++++..+|++|||-+.||...
T Consensus       103 gsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~  142 (481)
T PRK13914        103 TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDK  142 (481)
T ss_pred             eeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCC
Confidence            3678999999986446689999987799999999999864

>KOG3812|consensus

Probab=88.29  E-value=0.28  Score=40.67  Aligned_cols=50  Identities=20%  Similarity=0.417  Sum_probs=37.3

Q ss_pred             EEEeeccCCCCCC-----CCceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcC
Q psy11791          8 LKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPA   57 (143)
Q Consensus         8 ~~alydf~~~~~~-----~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPs   57 (143)
                      |++.-+|+..-++     ...++|...|.|-|-++-+.+||-+|..  .+..||||+
T Consensus        61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs  117 (475)
T KOG3812|consen   61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS  117 (475)
T ss_pred             EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence            4556676654443     2467899999999988889999999853  347799998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
1bk2_A	57	A-Spectrin Sh3 Domain D48g Mutant Length = 57		2e-05
3thk_A	73	Structure Of Sh3 Chimera With A Type Ii Ligand Link		3e-05
3qwy_A	308	Ced-2 Length = 308		4e-05
3ngp_A	62	High Resolution Structure Of Alpha-Spectrin Sh3 Dom		5e-05
1uue_A	62	A-Spectrin Sh3 Domain (V44t, D48g Mutant) Length =		6e-05
1hd3_A	62	A-Spectrin Sh3 Domain F52y Mutant Length = 62		7e-05
2rot_A	70	Structure Of Chimeric Variant Of Sh3 Domain- Shh Le		8e-05
2cdt_A	62	Alpha-Spectrin Sh3 Domain A56s Mutant Length = 62		9e-05
2oaw_A	65	Structure Of Shh Variant Of "bergerac" Chimera Of S		9e-05
1qkx_A	62	Alpha-Spectrin Src Homology 3 Domain, N47a Mutant I		1e-04
2rmo_A	70	Solution Structure Of Alpha-Spectrin_sh3-Bergerac F		1e-04
1e6h_A	62	A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutant		1e-04
2lj3_A	63	Pfbd: High-Throughput Strategy Of Backbone Fold Det		2e-04
1m8m_A	62	Solid-State Mas Nmr Structure Of The A-Spectrin Sh3		2e-04
3qwx_X	174	Ced-2 1-174 Length = 174		2e-04
1pwt_A	61	Thermodynamic Analysis Of Alpha-Spectrin Sh3 And Tw		2e-04
1qkw_A	62	Alpha-Spectrin Src Homology 3 Domain, N47g Mutant I		2e-04
1neg_A	83	Crystal Structure Analysis Of N-And C-Terminal Labe		2e-04
2f2v_A	62	Alpha-Spectrin Sh3 Domain A56g Mutant Length = 62		3e-04
2f2w_A	62	Alpha-Spectrin Sh3 Domain R21a Mutant Length = 62		3e-04
3i9q_A	57	Crystal Structure Of The Triple Mutant S19g-P20d-R2		3e-04
3m0p_A	62	Crystal Structure Of The R21d Mutant Of Alpha-Spect		4e-04
2f2x_A	62	Alpha-Spectrin Sh3 Domain R21g Mutant Length = 62		4e-04
1e6g_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25i, V53i, V58l		4e-04
1h8k_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l		4e-04
1e7o_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l		4e-04
3m0s_A	57	Crystal Structure Of The R21d Mutant Of Alpha-Spect		4e-04
2kr3_A	70	Solution Structure Of Sha-D Length = 70		6e-04
1x2p_A	68	Solution Structure Of The Sh3 Domain Of The Protein		6e-04
2lqw_A	303	Solution Structure Of Phosphorylated Crkl Length =		9e-04

>pdb|1BK2|A Chain A, A-Spectrin Sh3 Domain D48g Mutant Length = 57

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   +G+  +VPA+YV+
Sbjct: 4  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNGRQGFVPAAYVK 54

>pdb|3THK|A Chain A, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To The Chain C- Terminal Length = 73

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG 69
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+      + 
Sbjct: 8  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLDPAQSA 66
Query: 70 NRNNV 74
          +R N+
Sbjct: 67 SRENL 71

>pdb|3QWY|A Chain A, Ced-2 Length = 308

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++  +  N
Sbjct: 150 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQMEFHN 208

>pdb|3NGP|A Chain A, High Resolution Structure Of Alpha-Spectrin Sh3 Domain Mutant With A Redesigned Core Length = 62

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + +++G+ L L+  TNKDWW+ I  +G+  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWK-IEVNGRQGFVPAAYL 58

>pdb|1UUE|A Chain A, A-Spectrin Sh3 Domain (V44t, D48g Mutant) Length = 62

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+    +G+  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKT-EVNGRQGFVPAAYV 58

>pdb|1HD3|A Chain A, A-Spectrin Sh3 Domain F52y Mutant Length = 62

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  YVPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGYVPAAYV 58

>pdb|2ROT|A Chain A, Structure Of Chimeric Variant Of Sh3 Domain- Shh Length = 70

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   I  +GK +    +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 66

>pdb|2CDT|A Chain A, Alpha-Spectrin Sh3 Domain A56s Mutant Length = 62

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPASYV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPASYV 58

>pdb|2OAW|A Chain A, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin Sh3 Length = 65

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   I  +GK +    +VPA+YV+
Sbjct: 4  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62

>pdb|1QKX|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47a Mutant In The Distal Loop Length = 62

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVADRQGFVPAAYV 58

>pdb|2RMO|A Chain A, Solution Structure Of Alpha-Spectrin_sh3-Bergerac From Chicken Length = 70

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     ++GK +    +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANGKTYERQGFVPAAYV 66

>pdb|1E6H|A Chain A, A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutants Length = 62

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V I++G+ L L+  TNKDWW+ I  + +  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPREVTIKKGDILTLLNSTNKDWWK-IEVNDRQGFVPAAYL 58

>pdb|2LJ3|A Chain A, Pfbd: High-Throughput Strategy Of Backbone Fold Determination For Small Well-Folded Proteins In Less Than A Day Length = 63

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|1M8M|A Chain A, Solid-State Mas Nmr Structure Of The A-Spectrin Sh3 Domain Length = 62

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|3QWX|X Chain X, Ced-2 1-174 Length = 174

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++
Sbjct: 121 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173

>pdb|1PWT|A Chain A, Thermodynamic Analysis Of Alpha-Spectrin Sh3 And Two Of Its Circular Permutants With Different Loop Lengths: Discerning The Reasons For Rapid Folding In Proteins Length = 61

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+
Sbjct: 8  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVK 58

>pdb|1QKW|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47g Mutant In The Distal Loop Length = 62

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVGDRQGFVPAAYV 58

>pdb|1NEG|A Chain A, Crystal Structure Analysis Of N-And C-Terminal Labeled Sh3- Domain Of Alpha-Chicken Spectrin Length = 83

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV   KKL+
Sbjct: 20 VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV---KKLA 73

>pdb|2F2V|A Chain A, Alpha-Spectrin Sh3 Domain A56g Mutant Length = 62

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAGYV 58

>pdb|2F2W|A Chain A, Alpha-Spectrin Sh3 Domain R21a Mutant Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPAEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|3I9Q|A Chain A, Crystal Structure Of The Triple Mutant S19g-P20d-R21s Of Alpha Spectrin Sh3 Domain Length = 57

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+
Sbjct: 4  VLALYDYQEKGDSEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVK 54

>pdb|3M0P|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3 Domain. Crystal Obtained In Ammonium Sulphate At Ph 4. Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|2F2X|A Chain A, Alpha-Spectrin Sh3 Domain R21g Mutant Length = 62

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPGEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|1E6G|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25i, V53i, V58l Mutant Length = 62

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + I++G+ L L+  TNKDWW+V   + +  ++PA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTIKKGDILTLLNSTNKDWWKV-EVNDRQGFIPAAYL 58

>pdb|1H8K|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l Mutant Length = 62

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     +  ++PA+Y+
Sbjct: 9  VLVLYDYQEKSPREVTVKKGDILTLLNSTNKDWWKV-EVDDRQGFIPAAYL 58

>pdb|1E7O|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l Mutations Length = 62

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + +++G+ L L+  TNKDWW+ I  + +  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWK-IEVNDRQGFVPAAYL 58

>pdb|3M0S|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3 Domain. Crystal Obtained In Ammonium Sulphate At Ph 7 Length = 57

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+
Sbjct: 4  VLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVK 54

>pdb|2KR3|A Chain A, Solution Structure Of Sha-D Length = 70

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSG------KPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V ++++       +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANDKTYERQGFVPAAYV 66

>pdb|1X2P|A Chain A, Solution Structure Of The Sh3 Domain Of The Protein Arginine N-Methyltransferase 2 Length = 68

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 15 DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG 69
          DY+  D   +    GEK+ ++++T  DWW   R +G   Y+PA++V  +   S+G
Sbjct: 15 DYAATDETQLSFLRGEKILILRQTTADWWWGER-AGCCGYIPANHVGKHSGPSSG 68

>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl Length = 303

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 8   LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
           ++ LYDF     D + +  ++GE L +I+K  + WW      G+   +P  YVE   + S
Sbjct: 128 VRTLYDF--PGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSS 185
Query: 68  ----NGNRNN 73
               +GNRN+
Sbjct: 186 PHGKHGNRNS 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	1e-11
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	1e-10
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	7e-10
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	2e-09
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	4e-09
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	5e-09
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	6e-09
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	7e-09
1awj_A	77	ITK; transferase, regulatory intramolecular comple	9e-09
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	1e-08
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	2e-08
1wxb_A	68	Epidermal growth factor receptor pathway substrate	2e-08
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	3e-08
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	3e-08
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	3e-08
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	4e-08
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	4e-08
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	6e-08
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	7e-08
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	7e-08
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	8e-08
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	9e-08
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	1e-07
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	3e-05
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	1e-07
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	1e-07
1i07_A	60	Epidermal growth factor receptor kinase substrate	1e-07
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	1e-07
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-07
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	2e-07
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	2e-07
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	2e-07
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	6e-07
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	6e-07
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	4e-05
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	6e-07
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	6e-07
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	7e-07
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	7e-07
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	7e-07
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	8e-07
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-06
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	1e-06
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-06
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	1e-06
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	1e-06
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	2e-06
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	2e-06
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-06
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	2e-06
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	2e-06
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	2e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-06
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	3e-06
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	3e-06
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	3e-06
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	3e-06
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	3e-06
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	4e-06
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	4e-06
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	5e-06
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	6e-06
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	6e-06
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	7e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-06
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	9e-06
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	9e-04
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	1e-05
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	1e-05
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	1e-05
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	1e-05
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	1e-05
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	2e-05
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	2e-05
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-05
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	2e-05
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	2e-05
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-05
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	3e-05
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	3e-05
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	4e-05
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	4e-05
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	4e-05
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	4e-05
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	6e-05
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	6e-05
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	8e-05
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	9e-05
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	9e-05
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	9e-05
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	1e-04
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	1e-04
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	1e-04
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	1e-04
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	2e-04
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	2e-04
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	3e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	3e-04
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	3e-04
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	3e-04
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	4e-04
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	5e-04
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	5e-04
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	5e-04
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	6e-04
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	7e-04
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	8e-04
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	8e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-04

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 55.5 bits (134), Expect = 1e-11
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            L  +    ++   V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+     S 
Sbjct: 4  PPLPPYSAGGRE---VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD--SG 57

Query: 69 GNRNNVENINPTMEKT 84
            +  V  +    EK+
Sbjct: 58 TGKELVLALYDYQEKS 73

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 53.4 bits (129), Expect = 1e-10
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVYKKLS 67
            +Y F+ S++    + + EGE L L+++   D W +V R  G   YVP SY+ V    S
Sbjct: 11 VAIYHFEGSSEG--TISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 51.2 bits (123), Expect = 7e-10
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV 62
          +V+YDF     + + + + EGE + +        W +   + G+   VP  YVE+
Sbjct: 13 RVMYDFAAEPGNNE-LTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEI 66

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.0 bits (120), Expect = 2e-09
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV 62
          KV+Y +  S  D   + I+E E L +I+    +DW +     G+  YVP  Y++ 
Sbjct: 17 KVVYSYKASQPD--ELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQF 69

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPASYVEV 62
          KVLY +     D   + I  G+K+ L+ +     W  I   ++G+   VP +Y+ +
Sbjct: 5  KVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 58

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 48.8 bits (117), Expect = 5e-09
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            + DF         +  ++GE L +I+K    WW    + G    VP +Y+E Y +
Sbjct: 14 IAVGDFTAQQVGD--LTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYSE 68

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 49.9 bits (119), Expect = 6e-09
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYV 60
          +  +    LY+F     D   + +  GE L +    + +W+    I   G P  VP SYV
Sbjct: 1  MAPLFAVTLYEFKAERDDE--LDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYV 58

Query: 61 EVYKKLSNGNRNNVENINP 79
           +   +      +V+  + 
Sbjct: 59 RIIDLMDPAKYASVDTYDR 77

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 48.9 bits (117), Expect = 7e-09
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          E ++  +  LYD+  +      + ++  E+  L+  +   WW+V   +G   YVP+SY+ 
Sbjct: 16 EPEETVVIALYDYQTNDPQE--LALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLV 73

Query: 62 VYKKLS 67
               +
Sbjct: 74 EKSPNN 79

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 48.1 bits (115), Expect = 9e-09
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+  +      + ++  E+ +L+  +   WW+V   +G   Y P+SY+ 
Sbjct: 24 IALYDYQTNDPQE--LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 74

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 47.7 bits (114), Expect = 1e-08
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEV 62
          +D   +  YDF  S    + + +++G+ +F+ +     W    +    K  +VP +Y+  
Sbjct: 1  KDPKFEAAYDFPGSGSSSE-LPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTP 59

Query: 63 YK 64
          YK
Sbjct: 60 YK 61

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          ++V +   +D+    +    + I++ E+L+L+  + K WW+V  S  K  +VP++YVE  
Sbjct: 6  EEVVVVAKFDYVAQQEQE--LDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVERK 62

Query: 64 KKLSNGNRNN 73
                  ++
Sbjct: 63 NSARAAANSS 72

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K+LYDF     +   + + + E L +++   + WW++   SG+  YVP + +      S+
Sbjct: 11 KILYDFTARNANE--LSVLKDEVLEVLED-GRQWWKLRSRSGQAGYVPCNILGEASGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 47.1 bits (112), Expect = 3e-08
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF---YVPASYVEVYKK 65
            + D++   +       QEG  + ++++    WW      G      +VP++Y+E    
Sbjct: 14 VSIADYEGDEET---AGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS 70

Query: 66 LSN 68
            +
Sbjct: 71 GPS 73

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 46.5 bits (111), Expect = 3e-08
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y    +
Sbjct: 7  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHHHHH 64

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 46.5 bits (111), Expect = 3e-08
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          +YDF  +      +R++ G++  +++K +  WW+     G   Y+P++YV   K  +
Sbjct: 8  MYDFQATEAHD--LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            LYD+     +   +++++G++ F+++++N  WW+    +G+  Y+P++YV   + 
Sbjct: 12 VALYDYMPMNAND--LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED 66

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +VLY+F+        + + +GEKL ++   +K WW V   +G+  Y+P++ +E     S+
Sbjct: 11 QVLYEFEARNPRE--LTVVQGEKLEVLDH-SKRWWLVKNEAGRSGYIPSNILEPLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 45.7 bits (109), Expect = 6e-08
 Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          ++V +   +D+         + I++ E+L+L+  + K WW+V  ++ +  YVP++YVE  
Sbjct: 3  EEVIVIAKWDYTAQQDQE--LDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERK 59

Query: 64 KKLSN 68
           +  +
Sbjct: 60 LEHHH 64

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 45.3 bits (108), Expect = 7e-08
 Identities = 9/58 (15%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVY 63
            +  YDF   +     + +++G+ +++ ++    W    +    K  +VP +Y++ +
Sbjct: 2  MFEAAYDFP-GSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKPH 58

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 46.7 bits (111), Expect = 8e-08
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWW--QVIRSSGKPFYVPASYVEVYKKL 66
           VLYDF     D   +    GE LF+    N +W+  + I   G P  VP  +V +    
Sbjct: 9  IVLYDFKAEKADE--LTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIA 66

Query: 67 SN 68
          + 
Sbjct: 67 TG 68

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y
Sbjct: 5  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
          T + + D  Y    G  + +  G+ + +++K+   WW   +   K  ++PAS++E     
Sbjct: 13 TYRAIAD--YEKTSGSEMALSTGDVVEVVEKSESGWWFC-QMKAKRGWIPASFLEPLDSP 69

Query: 67 SNGNRNNVENINPTMEKTRSYSEGND 92
                            ++Y+    
Sbjct: 70 DETEDPEPNYAGEPYVAIKAYTAVEG 95

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK-KLS 67
             +  +     D   V + EGE + +I K    WW + R      Y P+ Y++     +S
Sbjct: 85  VAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQKSGQDVS 141

Query: 68  NGNRNNVENINPTMEKTRS 86
              R       P     R+
Sbjct: 142 QAQRQIKRGAPPRRSSIRN 160

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           VLYD+   +     + +++G+ L L+  TNKDWW++   +G+  +VPA+Y++ 
Sbjct: 10 LVLYDYQEKSPRE--LTVKKGDILTLLNSTNKDWWKI-EVNGRQGFVPAAYLKK 60

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 45.0 bits (107), Expect = 1e-07
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
           V+ ++         + +Q GE + +I+K    WW V  +S +  +VPA+Y+E    
Sbjct: 12 VVVSNYKKQENSE--LSLQAGEVVDVIEKNESGWWFV-STSEEQGWVPATYLEAQNS 65

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K  YDF    ++   + + + + L ++    + WW+V  +SG   +VP + +++ +
Sbjct: 5  KSKYDFV--ARNSSELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 4   QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPA 57
             + L  + D+         V + +G++  L+       W+V+ SSG    VP+
Sbjct: 197 GRLPLLAVCDYK-----QVEVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPS 245

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+      +
Sbjct: 9  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLDPAQS 65

Query: 69 GNRNNV 74
           +R N+
Sbjct: 66 ASRENL 71

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          K LY +D    D   +  ++ E L  +      WW+  R++G+   +P++YV++
Sbjct: 9  KALYPYDADDDDAYEISFEQNEILQ-VSDIEGRWWKARRANGETGIIPSNYVQL 61

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 21 LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLA 73

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          ME        LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+
Sbjct: 1  MENDPNLFVALYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYI 58

Query: 61 EVYK 64
              
Sbjct: 59 TPVN 62

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 43.5 bits (103), Expect = 6e-07
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            +  +   +KD   +  ++G  + +I+K  + WW + R  GK  + PASY++  K 
Sbjct: 12 VTVQPYTSQSKDE--IGFEKGVTVEVIRKNLEGWWYI-RYLGKEGWAPASYLKKAKD 65

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 46.4 bits (109), Expect = 6e-07
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
              + F    +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++ 
Sbjct: 151 VGTFKFTGERETD--LPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ 203

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           KV +D   +  D   +R+++G+ + + +K +   ++     G+   VP +Y+  
Sbjct: 251 KVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYK-AELDGQIGSVPHTYLRF 303

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 45.6 bits (107), Expect = 6e-07
 Identities = 17/53 (32%), Positives = 33/53 (62%)

Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++
Sbjct: 121 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 43.4 bits (103), Expect = 6e-07
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            + D+  + +    +    GEK+ ++++T  DWW     +G   Y+PA++V  +   S+
Sbjct: 11 VAIADYAATDETQ--LSFLRGEKILILRQTTADWWWG-ERAGCCGYIPANHVGKHSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 42.9 bits (102), Expect = 7e-07
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEV 62
           V YDF   ++D   + I+ G+K++++    +KDWW   +  SGK   VPA ++E 
Sbjct: 6  IVQYDFMAESQDE--LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 59

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 43.0 bits (102), Expect = 7e-07
 Identities = 13/62 (20%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
             ++F+  T+    +  ++GE++ L+++ +++W++  I  + +    P +YV+V    S
Sbjct: 11 IAKFNFNGDTQVE--MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 43.7 bits (103), Expect = 7e-07
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          ++V +   +D+         + I++ E+L+L+   +K WW+V  ++ +  YVP++YVE
Sbjct: 30 EEVIVIAKWDYTAQQDQE--LDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVE 84

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 43.6 bits (103), Expect = 8e-07
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
             Y F    +    +  ++GE + LI+K N++W++  I  +G+    PASYV+V ++  
Sbjct: 21 VAQYTFKGDLEVE--LSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPR 78

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 14/60 (23%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
          ++D+ +  LYD+   + D   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV 
Sbjct: 1  MEDIIVVALYDYVSWSPDD--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVA 57

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 42.9 bits (101), Expect = 1e-06
 Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
               +         +    G ++ +++K    WW V R      + P+ Y+ + +
Sbjct: 12 MTCSAYQKVQDSE--ISFPAGVEVQVLEKQESGWWYV-RFGELEGWAPSHYLVLDE 64

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-------IRSSGKPFYVPASYVE 61
            LYD+   +     V +++G+ L L+  TNKDWW+V        ++  +  +VPA+YV+
Sbjct: 5  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEVYKKL 66
           V YDF   ++D   + I+ G+K++++    +KDWW   +  SGK   VPA ++E  +  
Sbjct: 10 IVQYDFMAESQDE--LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDK 67

Query: 67 S 67
           
Sbjct: 68 K 68

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
             YDF         + +++ + L ++   ++ WW+V   +G+  YVP + +  Y 
Sbjct: 12 LCNYDFQARNSSE--LSVKQRDVLEVLDD-SRKWWKVRDPAGQEGYVPYNILTPYP 64

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 6/62 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEVY 63
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+ 
Sbjct: 18 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 76

Query: 64 KK 65
          K+
Sbjct: 77 KR 78

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 17/80 (21%), Positives = 34/80 (42%)

Query: 12  YDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNR 71
             +D+   D + +  ++GE L +I+K  + WW      G+   +P  YVE   + S   +
Sbjct: 130 TLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGK 189

Query: 72  NNVENINPTMEKTRSYSEGN 91
           +   N N       +++   
Sbjct: 190 HGNRNSNSYGIPEPAHAYAQ 209

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
           L    L VL D+            + GEKL +I      WW+ I  S+G+  Y+P   V
Sbjct: 14 GLDSDFLAVLSDYPSPDISP--PIFRRGEKLRVISDEG-GWWKAISLSTGRESYIPGICV 70

Query: 61 EVYKKLSNG 69
                S+G
Sbjct: 71 ARVSGPSSG 79

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 5/61 (8%)

Query: 2   ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
             + + L+ L D+           + +G++  L     +  W V    G    VP+  + 
Sbjct: 280 SNKPIILRALCDYK-----QDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLI 334

Query: 62  V 62
           +
Sbjct: 335 I 335

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 26 IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 10 MKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD 47

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 41.9 bits (99), Expect = 2e-06
 Identities = 12/58 (20%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKK 65
             ++F+  T+    +  ++GE++ L+++ +++W++  I  + +    P +YV+V K+
Sbjct: 10 IAKFNFNGDTQVE--MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR 65

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+
Sbjct: 49 LYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYI 96

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          + LY F   T++   +  ++GE + +I+K   D  WW+   + G+   VP +YV V    
Sbjct: 10 QTLYPFSSVTEEE--LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 67

Query: 67 SNGN 70
             +
Sbjct: 68 PALH 71

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 42.1 bits (99), Expect = 3e-06
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          + LY F   T++   +  ++GE + +I+K   D  WW+   + G+   VP +YV V    
Sbjct: 21 QTLYPFSSVTEEE--LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 78

Query: 67 S 67
           
Sbjct: 79 P 79

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          LQD  +  L+ ++ S      +  ++GE+L +++++  +WW+    ++G+  ++P ++V 
Sbjct: 4  LQDNLVIALHSYEPSHDGD--LGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVA 60

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 26 IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 8  MKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD 45

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 41.6 bits (98), Expect = 3e-06
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASY 59
          M       + LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P+ Y
Sbjct: 1  MVQISTLFEALYDYEARTEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIY 58

Query: 60 VEVYKKLS 67
          +    +L 
Sbjct: 59 LAPVDRLD 66

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 41.2 bits (97), Expect = 4e-06
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF----YVPASYVEVYK 64
          L+DF   T +   +  + G+   + +K  + WW  +           YVP +Y+   +
Sbjct: 16 LWDFKSRTDEE--LSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE 71

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 41.2 bits (97), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          +V  DF  S  D   +++++G+ + +I K     W     + K       YV+V
Sbjct: 13 RVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMG-LLNNKVGTFKFIYVDV 65

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 41.1 bits (97), Expect = 5e-06
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYK 64
            LYDF+    D + +R+ EG+ +F+  K  + W      S  K   VP  +V   +
Sbjct: 9  VALYDFE-PENDNE-LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 40.8 bits (96), Expect = 6e-06
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+
Sbjct: 11 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 68

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +VL+ F   TK+   +++  G  +F++KK N +W  V+  +G+   VP +Y+E     S+
Sbjct: 11 RVLFGFVPETKEE--LQVMPGNIVFVLKKGNDNWATVMF-NGQKGLVPCNYLEPVSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 40.3 bits (95), Expect = 7e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
               YD+D +  +   +   E +K+  I+  + DWW   +   G     P++YV +
Sbjct: 2  WATAEYDYDAAEDNE--LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL 56

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYV 60
                    Y+F  + +    +   +G+ L ++  T   +W++     G+   +PA+YV
Sbjct: 8  WPSGTECIAKYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYV 65

Query: 61 EVYKKLSNGNRNNVEN 76
          +  + +  G + ++  
Sbjct: 66 QKREGVKAGTKLSLMP 81

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 43.0 bits (100), Expect = 9e-06
 Identities = 17/76 (22%), Positives = 29/76 (38%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNN 73
           FD++  D + +  ++G+ L +  K  + WW    S GK   +P  YVE Y+  S      
Sbjct: 141 FDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSAL 200

Query: 74  VENINPTMEKTRSYSE 89
           +               
Sbjct: 201 IGGNQEGSHPQPLGGP 216

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 37.3 bits (85), Expect = 9e-04
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 1   MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
           ++   +  +V+     +  D   + ++ GE + + K      W+    +GK  + P ++V
Sbjct: 233 LQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-ECNGKRGHFPFTHV 291

Query: 61  EV 62
            +
Sbjct: 292 RL 293

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             +D+   +     +  ++G  L L  + ++DWW+  R +G    VP  Y+ V
Sbjct: 10 IAKFDYVGRSARE--LSFKKGASLLLYHRASEDWWEG-RHNGIDGLVPHQYIVV 60

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF--------YVPASYVEV 62
          L+D+   T +   +  + G+KL ++  +++ WW       K          Y+P++YV  
Sbjct: 13 LFDYQARTAED--LSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAE 70

Query: 63 YKKLSNG 69
              S+G
Sbjct: 71 DSGPSSG 77

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEVY 63
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+ 
Sbjct: 18 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 76

Query: 64 KKLSN 68
          K+   
Sbjct: 77 KRRKK 81

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 7/57 (12%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKK----TNKDWWQVIRSSGKPFYVPASYVE 61
            +Y F     +   + +   +KL +++      N +WW     +GK  YVP++Y+ 
Sbjct: 17 FAVYTFKARNPNE--LSVSANQKLKILEFKDVTGNTEWWLA-EVNGKKGYVPSNYIR 70

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYK 64
            LYDF+    D + +R+ EG+ +F+  K  + W      S  K   VP  +V   +
Sbjct: 5  VALYDFE-PENDNE-LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          K +        D   + ++ G+ + + +      W+    +G+    P ++V++
Sbjct: 5  KAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKI 57

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
             +D+   T     +  ++G  L L ++ + DWW+  R +G    +P  Y+ V  
Sbjct: 13 IAKFDYVGRTARE--LSFKKGASLLLYQRASDDWWEG-RHNGIDGLIPHQYIVVQD 65

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
           FD++  D + +  ++G+ L +  K  + WW    S GK   +P  YVE Y+  S 
Sbjct: 143 FDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASA 197

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LYD+     D   + +  G+ L +I +    WW V   +G+  +VP SY+E     S+
Sbjct: 12 RALYDYTAQNPDE--LDLSAGDILEVILEGEDGWWTV-ERNGQRGFVPGSYLEKLSGPSS 68

Query: 69 G 69
          G
Sbjct: 69 G 69

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVYKKL 66
          LYD++ +      +   +GEK  +++    DWW+    ++G+  Y+P++YV     +
Sbjct: 12 LYDYNATRWTD--LSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSI 66

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKL 66
           Y+F   T +   +   +G+ L ++  T + +W++     G+   +PA+YV+  + +
Sbjct: 17 KYNFH-GTAEQD-LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV 71

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 6  VTLKV-LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVY 63
          VT  V LYD++  T+    +  ++GE+L ++  T  DWW     S+G+  Y+P++YV   
Sbjct: 2  VTTFVALYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59

Query: 64 KKLS 67
            + 
Sbjct: 60 DSIQ 63

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 39.4 bits (92), Expect = 3e-05
 Identities = 7/65 (10%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K +        D   + ++ G+ + + +      W+    +G+    P ++V+++   + 
Sbjct: 20 KAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKIFDPQNP 78

Query: 69 GNRNN 73
              +
Sbjct: 79 DENES 83

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 39.0 bits (91), Expect = 3e-05
 Identities = 14/64 (21%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEV 62
          +D+ +  LYD++    +   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV  
Sbjct: 24 EDIIVVALYDYEAIHHED--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVAR 80

Query: 63 YKKL 66
             L
Sbjct: 81 VDSL 84

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 38.9 bits (91), Expect = 4e-05
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEVYKKLSN 68
            +          +  ++G+ + +++   NK W++V   +SG+   + A  +      S+
Sbjct: 23 KCEHTRPKPGE--LAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERSGPSS 80

Query: 69 G 69
          G
Sbjct: 81 G 81

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 38.3 bits (90), Expect = 4e-05
 Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
            L+ +     +   + +Q+GE + ++ K    W + +   +G+    P+ YV      S
Sbjct: 11 VALHTYSAHRPEE--LDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          T+  LYD+  +  D   + I  G+ + +  K N+DWW      G+  Y PA++V 
Sbjct: 8  TVVALYDYTANRSDE--LTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVA 60

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 39.4 bits (92), Expect = 4e-05
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL 66
            LYD++  T +   +  ++GE+  +I  T  DWW+    ++GK  Y+P++YV     +
Sbjct: 31 VALYDYEARTTED--LSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADSI 87

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 38.1 bits (89), Expect = 6e-05
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV 
Sbjct: 21 LYDYEAITEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 70

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            LY F     +   + ++ G+ + L++ +N+DWW+  +   +  + PA++V+     S+
Sbjct: 11 VALYKFVPQENED--LEMRPGDIITLLEDSNEDWWKG-KIQDRIGFFPANFVQRLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVYKKLS 67
          + +  +     D   +   +G+   +  +    W  V    + +   +    VE     S
Sbjct: 11 RAILPYT-KVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSGPS 69

Query: 68 NG 69
          +G
Sbjct: 70 SG 71

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 37.7 bits (88), Expect = 9e-05
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          +V+     +  D   + ++ GE + + K      W+    +GK  + P ++V +
Sbjct: 10 RVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-ECNGKRGHFPFTHVRL 62

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
           FD++      +  + G+ +FL+ + NKDW +     G     P S+V++ K   
Sbjct: 181 FDFTGNSKLELNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILKDFP 233

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          + L+DF  ++K    +  + G+ +FL+ + NKDW +     G     P S+V++ K   
Sbjct: 22 EALFDFTGNSKLE--LNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILKDFP 77

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             + +   T     +  + G+ L L ++ + DWW+    +G    +P  Y+ +
Sbjct: 14 VACFAYTGRTAQE--LSFRRGDVLRLHERASSDWWRG-EHNGMRGLIPHKYITL 64

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
          + +Y +    +D   + ++EG+++ ++++ +  W+  V R + K    P +YV      S
Sbjct: 11 RAMYQYRPQNEDE--LELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LY F+  T D   +  +EG+ +++   ++ +WW+   S G+   +P++YV      S+
Sbjct: 11 RALYTFEPRTPDE--LYFEEGDIIYITDMSDTNWWKG-TSKGRTGLIPSNYVAEQSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K L ++         ++  +G+ + L ++ +++W+Q    +G     PAS VEV    S+
Sbjct: 11 KALCNYRGKNPGD--LKFNKGDVILLRRQLDENWYQG-EINGVSGIFPASSVEVISGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVR------IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            L+D+D  T              +EG+ + +    + D +    +  +   +P + V 
Sbjct: 21 VALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVS 79

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + L D++ S      +  +  + + +  K  ++ W + + +GK    P  +VE+  
Sbjct: 14 RALKDYNVSDTSL--LPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILL 67

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 6/54 (11%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          + +  +     D   +   +G+   +  +    W  V    + +   +    VE
Sbjct: 9  RAILPYT-KVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVE 61

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
           T+K LYD+     D   +    G  +  + K    WW+    +    Y P++YVE    
Sbjct: 8  RTVKALYDYKAKRSDE--LTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG 65

Query: 66 LSNG 69
           S+G
Sbjct: 66 PSSG 69

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + ++D    T   + +  + G+ + ++  +NKDWW   +   +  + PAS+V ++ 
Sbjct: 14 EAVWDHV--TMANRELAFKAGDVIKVLDASNKDWWWG-QIDDEEGWFPASFVRLWV 66

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 36.6 bits (85), Expect = 4e-04
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +YD+  + +D   +   +G+ + ++ K + DWWQ    +G     P++YV++    S 
Sbjct: 38 IAMYDYAANNEDE--LSFSKGQLINVMNKDDPDWWQG-EINGVTGLFPSNYVKMTTDSSG 94

Query: 69 GN 70
           +
Sbjct: 95 PS 96

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 92

 Score = 36.1 bits (83), Expect = 5e-04
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 12 YDFDYSTKDGKYVRIQEGEKLFLIKKT----NKDWWQVIRSSGKPFYVPASYVEVY 63
           + +++      V + EG+ + +IKK     +++ W +  +     +V +S+++ Y
Sbjct: 22 AERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLI-DNGVTKGFVYSSFLKPY 76

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LYDF+   +    +  +EG+ + L  + +++W++     G+  + P +YVEV   L +
Sbjct: 7  RGLYDFEPENQGE--LGFKEGDIITLTNQIDENWYEG-MIHGESGFFPINYVEVIVPLEH 63

Query: 69 GNRNN 73
           + ++
Sbjct: 64 HHHHH 68

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + L+DF  ++K    +  + G+ +FL+ + NKDW +     G     P S+V++ K
Sbjct: 8  EALFDFTGNSKLE--LNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILK 60

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 35.3 bits (82), Expect = 6e-04
 Identities = 10/55 (18%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
          + +YD+  +  + + V  ++G+ +  ++  +  W    ++ +G+   +PA+Y+E 
Sbjct: 10 RAMYDYS-AQDEDE-VSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEF 62

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +YD+    K+ + +  QEG  +++IKK +  W++    +G     P +YVE     S+
Sbjct: 21 VAIYDYT-KDKEDE-LSFQEGAIIYVIKKNDDGWYEG-VMNGVTGLFPGNYVESISGPSS 77

Query: 69 G 69
          G
Sbjct: 78 G 78

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 34.9 bits (81), Expect = 8e-04
 Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +  +DF   T     + +Q+G+ +++ K+ +++W++     G+    P +Y+E+    S+
Sbjct: 11 RAKFDFKAQTLKE--LPLQKGDIVYIYKQIDQNWYEG-EHHGRVGIFPRTYIELLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 35.6 bits (82), Expect = 8e-04
 Identities = 8/58 (13%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 9  KVLYDFDYSTKDGKY----VRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVE 61
             Y ++      +     + +  G+ L++    ++D +++     G+   VP+++V+
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVD 78

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 37.4 bits (87), Expect = 9e-04
 Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL 66
          LYD++    +   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV     L
Sbjct: 14 LYDYEAIHHED--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVARVDSL 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.85
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.81
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.78
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.77
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.76
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.73
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.72
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.7
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.7
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.67
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.67
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.66
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.66
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.66
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.66
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.65
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.65
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.65
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.65
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.64
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.64
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.64
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.64
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.64
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.64
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.64
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.64
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.64
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.64
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.64
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.64
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.64
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.63
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.63
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.63
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.63
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.63
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.63
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.63
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.63
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.63
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.63
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.63
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.63
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.63
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.63
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.63
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.63
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.63
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.63
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.63
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.62
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.62
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.62
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.62
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.62
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.62
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.62
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.62
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.62
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.62
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.62
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.62
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.62
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.62
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.62
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.62
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.61
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.61
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.61
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.61
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.61
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.61
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.61
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.61
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.61
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.61
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.61
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.61
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.61
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.61
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.61
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.61
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.61
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.61
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.61
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.61
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.61
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.6
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.6
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.6
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.6
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.6
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.6
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.6
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.6
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.6
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.6
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.6
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.6
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.6
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.6
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.6
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.6
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.6
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.6
3u23_A	65	CD2-associated protein; structural genomics, struc	99.6
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.6
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.59
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.59
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.59
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.59
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.59
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.59
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.59
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.59
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.59
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.59
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.59
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.59
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.59
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.58
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.58
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.58
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.58
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.58
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.58
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.58
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.58
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.58
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.58
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.58
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.58
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.57
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.57
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.57
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.57
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.57
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.57
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.57
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.57
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.56
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.56
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.56
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.56
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.56
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.56
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.56
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.56
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.56
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.55
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.55
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.55
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.55
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.55
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.55
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.55
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.54
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.54
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.54
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.54
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.53
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.53
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.52
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.52
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.51
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.51
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.5
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.49
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.48
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.46
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.46
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.45
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.45
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.44
1u3o_A	82	Huntingtin-associated protein-interacting protein;	99.43
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.41
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.4
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.38
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.37
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.36
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.35
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.33
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.32
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.27
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.26
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.26
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.26
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	99.26
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	99.26
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	99.24
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.22
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.22
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.8
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.79
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	99.17
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.13
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	99.1
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.06
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	99.04
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	99.03
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.03
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.9
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	98.89
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	98.86
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	98.84
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	98.82
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	98.76
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.73
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	98.7
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.63
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	98.46
2dly_A	121	FYN-related kinase; BRK family kinase, structural	98.37
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	98.27
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	98.13
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	97.94
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	97.94
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	97.92
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	97.83
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	97.52
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	97.48
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.43
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	97.43
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	97.41
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	97.37
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	97.29
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.27
2dm0_A	125	Tyrosine-protein kinase TXK; TEC family kinase, st	97.23
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	97.22
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	97.21
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	97.15
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	97.02
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	96.79
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	96.75
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	96.45
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	96.45
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	96.42
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	96.41
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	96.37
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	96.25
2kt8_A	76	Probable surface protein; SH3 family, structural g	96.22
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	96.15
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	96.06
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	96.01
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	95.98
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	95.77
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	95.76
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	95.76
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	95.73
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	95.72
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	95.71
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	95.57
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	95.56
2kno_A	131	Tensin-like C1 domain-containing phosphatase; SH2	95.54
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	95.5
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	95.46
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	95.38
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	95.37
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	95.36
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	95.24
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	95.12
2eo6_A	141	B-cell linker protein; SH2, cytoplasmic adapter pr	95.12
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	95.11
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	95.02
3hhm_B	373	NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil	95.01
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	94.97
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	94.88
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	94.81
2bbu_A	164	Suppressor of cytokine signaling 3; SH2 domain, ex	94.78
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	94.63
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	94.55
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	94.47
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	94.43
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	94.25
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	94.23
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	94.2
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	94.08
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	94.05
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	93.91
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	93.65
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	93.49
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	93.34
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	93.22
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	93.16
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	93.07
2shp_A	525	SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin	93.03
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	92.72
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	92.26
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	91.63
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	91.41
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	91.37
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	90.98
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	88.67

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.85  E-value=5.6e-22  Score=146.36  Aligned_cols=122  Identities=20%  Similarity=0.402  Sum_probs=94.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeeeccCCCCCCcccCCCccccc
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEK   83 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e   83 (143)
                      ...++|+|||+++..+  ||+|++||++.|+++ +++||+++.. .|++|+||+|||++....... .||.+.|+|.+||
T Consensus        12 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~~l~~~-~w~~g~isr~~ae   87 (175)
T 4d8k_A           12 DNLVIALHSYEPSHDG--DLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKANSLEPE-PWFFKNLSRKDAE   87 (175)
T ss_dssp             -CEEEESSCBCCCSSS--BCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETTCSTTC-TTBCSSCCHHHHH
T ss_pred             CcEEEEccCcCCcCCc--ccccccCCEEEEEcc-CCCEEEEEECCCCceeeecccccccccccccc-ceecCcccHHHHH
Confidence            3579999999977766  999999999999998 6799999984 789999999999987554433 5999999999999


Q ss_pred             cccCcCCCCCCceE-------------EEeceecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         84 TRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        84 ~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      ++|+..|+..|+||             ||.....  .+++.++     .+..    +.+...|+||++||.
T Consensus        88 ~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~--~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~  156 (175)
T 4d8k_A           88 RQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQ--NQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVR  156 (175)
T ss_dssp             HHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECT--TSCEEEEEEEEEECSSSCEESSTTSEESSHHHHHH
T ss_pred             HHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcc--cCCCceEEEEEEECCCCCEEECCCCccCCHHHHHH
Confidence            99998887679998             3332100  1122232     2221    677889999999884

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.81  E-value=4.6e-20  Score=126.40  Aligned_cols=81  Identities=22%  Similarity=0.473  Sum_probs=71.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCCCCCCcccCCCccccc
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEK   83 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e   83 (143)
                      ...++|+|||.+...+  +|+|++||+|.|+++.+++||++++ .+|+.|+||++||+.+...... .||.++|+|.+||
T Consensus        27 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~~-~w~~g~isR~~Ae  103 (109)
T 2yt6_A           27 VTIFVALYDYEARTTE--DLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADSIQAE-EWYFGKMGRKDAE  103 (109)
T ss_dssp             CCEEEESSCCCCSSTT--SCCCCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESSSCTTT-HHHHHCCCSCCCC
T ss_pred             CEEEEECccCCCCCCC--ccCCCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECCccccc-ccccCCcCHHHHH
Confidence            3578999999977666  9999999999999998899999997 6899999999999988654333 5999999999999


Q ss_pred             cccCc
Q psy11791         84 TRSYS   88 (143)
Q Consensus        84 ~ll~~   88 (143)
                      ++|++
T Consensus       104 ~lL~~  108 (109)
T 2yt6_A          104 SGPSS  108 (109)
T ss_dssp             CCSCC
T ss_pred             HHhhC
Confidence            99974

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.78  E-value=7.3e-20  Score=151.23  Aligned_cols=89  Identities=24%  Similarity=0.493  Sum_probs=78.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeeeccCCCCCCcccCCCcccccc
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKT   84 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~   84 (143)
                      ..++|+|||+++..+  ||+|++||++.|+++.+++||+++.. +|++|+||+|||++....... .||.+.|+|..|++
T Consensus         3 ~~~~al~~~~~~~~~--el~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~le~~-~w~~g~~~r~~ae~   79 (452)
T 1fmk_A            3 TTFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAE-EWYFGKITRRESER   79 (452)
T ss_dssp             EEEEESSCBCCCSSS--BCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTSGGGS-TTEEETCCHHHHHH
T ss_pred             eEEEECCccCCCCCC--CCCccCCCEEEEeccCCCCceEEEEcCCCcccccCccccccccccccc-ccccCCccHHHHHH
Confidence            368999999977777  99999999999999988999999986 689999999999986544333 59999999999999


Q ss_pred             ccCcCCCCCCceE
Q psy11791         85 RSYSEGNDKGGFV   97 (143)
Q Consensus        85 ll~~~g~~~G~F~   97 (143)
                      +|+..|++.|.|+
T Consensus        80 ~L~~~~~~~G~FL   92 (452)
T 1fmk_A           80 LLLNAENPRGTFL   92 (452)
T ss_dssp             HHTCTTSCTTEEE
T ss_pred             HhccCCCCCceEE
Confidence            9999988889998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.77  E-value=1.7e-19  Score=152.20  Aligned_cols=88  Identities=24%  Similarity=0.505  Sum_probs=78.3

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeeeccCCCCCCcccCCCccccccc
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTR   85 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~l   85 (143)
                      .++|||||+++..+  ||+|++||++.|+++.+++||.++.. +|+.|+||+|||+....... ..||.+.|+|..|+++
T Consensus        87 ~~~alyd~~~~~~~--el~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~l~~-~~wy~g~i~r~~ae~~  163 (535)
T 2h8h_A           87 TFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQA-EEWYFGKITRRESERL  163 (535)
T ss_dssp             CEEESSCBCCCSSS--BCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETTSGGG-STTBCCSCCHHHHHHH
T ss_pred             EEEEccccCCcCCC--cCCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccccccc-cceeccccCHHHHHHH
Confidence            58999999977776  99999999999999988999999986 68999999999998654433 3599999999999999


Q ss_pred             cCcCCCCCCceE
Q psy11791         86 SYSEGNDKGGFV   97 (143)
Q Consensus        86 l~~~g~~~G~F~   97 (143)
                      |+..|+..|.||
T Consensus       164 L~~~~~~~G~FL  175 (535)
T 2h8h_A          164 LLNAENPRGTFL  175 (535)
T ss_dssp             HTCTTCCTTEEE
T ss_pred             hccCCCCCCeEE
Confidence            999998889998

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.76  E-value=8.4e-19  Score=108.88  Aligned_cols=57  Identities=26%  Similarity=0.560  Sum_probs=50.8

Q ss_pred             ceEEEEeeccCCCCCCCCc-eecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKY-VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~e-Ls~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...|+|||||+++..+  + |+|++||+|.|+++.+++||.++..+|+.|+||+|||+.+
T Consensus         3 g~~~rAlydy~~~~~~--e~Ls~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            3 GARCRTLYPFSGERHG--QGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             SCEEEESCCCCSCCCS--SCCCCCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred             CCEEEECcccCCCCCC--CCccCCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence            4578999999977665  6 9999999999999988999999987899999999999863

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.73  E-value=8.7e-18  Score=111.48  Aligned_cols=79  Identities=19%  Similarity=0.406  Sum_probs=51.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCCCCCCcccCCCccccc
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEK   83 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e   83 (143)
                      ..+++|+|||.++..+  +|+|++||++.|+++ +++||+++. .+|+.|+||++||+.+......  ++.++|+|.+|+
T Consensus         3 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~~--~~~~~~~r~~ae   77 (90)
T 3reb_B            3 DIIVVALYDYVSWSPD--DLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSGGGT--SGGGRHRRRQAE   77 (90)
T ss_dssp             CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEC-SSSEEEEEETTTCCEEEEEGGGEEEECC------------------
T ss_pred             cEEEEECCccCcCCcC--cCCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEehhheEECCCCCCc--ccccCcCHHHHH
Confidence            3468999999877666  999999999999998 468999998 5789999999999988654333  389999999999


Q ss_pred             cccCc
Q psy11791         84 TRSYS   88 (143)
Q Consensus        84 ~ll~~   88 (143)
                      ++|..
T Consensus        78 ~lL~~   82 (90)
T 3reb_B           78 RMSQI   82 (90)
T ss_dssp             -----
T ss_pred             HHHhH
Confidence            98743

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.72  E-value=6.3e-18  Score=139.54  Aligned_cols=88  Identities=20%  Similarity=0.503  Sum_probs=76.6

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCCCCCCcccCCCcccccc
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKT   84 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~   84 (143)
                      .+++|+|||+++..+  ||+|++||++.|+++ +++||++++ .+|+.|+||+|||........ ..||.+.|+|..|++
T Consensus         9 ~~~~al~~~~~~~~~--el~~~~gd~~~v~~~-~~~W~~~~~~~~g~~G~~P~~yv~~~~~le~-~~W~~g~i~r~~ae~   84 (454)
T 1qcf_A            9 IIVVALYDYEAIHHE--DLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSLET-EEWFFKGISRKDAER   84 (454)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETTCGGG-STTEETTCCHHHHHH
T ss_pred             eEEEECcccCCcCCC--cCcccCCCEEEEEec-CCCCeEEEECCCCceEEecchhccccccccc-ccccccccchhhhhh
Confidence            468999999977777  999999999999998 478999997 588999999999997654433 359999999999999


Q ss_pred             ccCcCCCCCCceE
Q psy11791         85 RSYSEGNDKGGFV   97 (143)
Q Consensus        85 ll~~~g~~~G~F~   97 (143)
                      +|+..|+..|.|+
T Consensus        85 ~L~~~~~~~G~FL   97 (454)
T 1qcf_A           85 QLLAPGNMLGSFM   97 (454)
T ss_dssp             HHHSTTCCTTCEE
T ss_pred             hhhcCCCCCceEE
Confidence            9988887779998

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.70  E-value=4.2e-17  Score=102.64  Aligned_cols=57  Identities=16%  Similarity=0.354  Sum_probs=50.8

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      ...++|||||+++..+  ||+|++||+|.|+++.+++||.++.. +|+.|+||+|||+++
T Consensus         6 ~~~~~Alydy~a~~~~--ELs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A            6 LFSYQALYSYIPQNDD--ELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             SCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             CEEEEEceeECCCCcC--CcCCCCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEE
Confidence            3468999999977777  99999999999999989999999874 689999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.70  E-value=3.2e-17  Score=135.29  Aligned_cols=125  Identities=13%  Similarity=0.247  Sum_probs=89.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec-CCCCceEEEeCCCceEEEcCCceeeeeccCC-----CCCCcccCC
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKKLSN-----GNRNNVENI   77 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~-----~~~w~~~~i   77 (143)
                      ....++|+|||+++..+  ||+|++||++.|+++ .+++||+++...|+.|+||+|||++......     ...||.+.|
T Consensus        10 ~~~~~~aly~~~~~~~~--el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~wyhg~i   87 (450)
T 1k9a_A           10 SGTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKI   87 (450)
T ss_dssp             TTCEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCCCCCCTTEESCTTBCTTC
T ss_pred             CCCEEEECCCcCccCCC--cCCCCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccccccccccccccccccCc
Confidence            34579999999977776  999999999999998 5779999998679999999999998654321     126999999


Q ss_pred             CccccccccCcCCCCCCceEEEec------eecccCCCceec-----c-Ccc--cccccCCCCCCCCcc
Q psy11791         78 NPTMEKTRSYSEGNDKGGFVSVKD------RAISIDNNSSIK-----Q-KPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        78 ~r~~~e~ll~~~g~~~G~F~sv~~------~~~~~~~~~~vk-----~-~~~--l~e~~~f~~ip~li~  132 (143)
                      +|.+||++|+.. . .|.|+--.+      -.+.+.-.+.++     . ...  +.+++.|.++++|+.
T Consensus        88 ~r~~ae~~L~~~-~-~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv~  154 (450)
T 1k9a_A           88 TREQAERLLYPP-E-TGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVE  154 (450)
T ss_dssp             CHHHHHHHTCSC-C-TTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHH
T ss_pred             CHHHhhhhhccC-C-CceEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHHHHHh
Confidence            999999999653 2 388882111      111111111221     1 111  678888988887664

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.67  E-value=1.3e-16  Score=100.93  Aligned_cols=59  Identities=27%  Similarity=0.636  Sum_probs=51.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|+|||+++..+  +|+|++||+|.|++++ ++||++++.+|+.|+||+|||+....
T Consensus         3 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~-~~Ww~~~~~~g~~G~~Psnyv~~~~~   61 (67)
T 2b86_A            3 EEVIVIAKWDYTAQQDQ--ELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERKLE   61 (67)
T ss_dssp             CCEEEEESSCBCCSSTT--SCCBCTTCEEEEEECS-SSSCEEECTTSCEEECCCCSEEEC--
T ss_pred             CCeEEEEeeeECCCCCC--ccccCCCCEEEEEecC-CCeEEEEeCCCCEEEeChHHEeEcCC
Confidence            34679999999977766  9999999999999984 79999998789999999999997653

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.67  E-value=1.7e-16  Score=99.55  Aligned_cols=57  Identities=28%  Similarity=0.623  Sum_probs=51.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++.+++||++++.+|+.|+||++||+...
T Consensus         4 ~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   60 (65)
T 1b07_A            4 EYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYH   60 (65)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEECC
T ss_pred             eEEEECCcCCCCCCC--ccCCcCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeecC
Confidence            568999999977766  999999999999999889999999778999999999998764

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.66  E-value=1.7e-16  Score=99.77  Aligned_cols=56  Identities=23%  Similarity=0.613  Sum_probs=51.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||.++..+  +|+|++||+|.|+.+.+++||++++.+|+.|+||++||+..
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYDFQATEAH--DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSCBCCSSSS--BCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred             eEEEECccCCCCCCC--eecCCcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence            458999999977666  99999999999999988999999977899999999999976

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.66  E-value=1.8e-16  Score=96.51  Aligned_cols=54  Identities=28%  Similarity=0.617  Sum_probs=49.5

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      +++|+|||.++..+  +|+|++||++.|+++.+++||.+++.+|+.|+||++||++
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~   56 (57)
T 1cka_A            3 YVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             EEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             EEEECCcCCCCCCC--CCCCCCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEE
Confidence            58999999977666  9999999999999998899999997789999999999975

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.66  E-value=2.2e-16  Score=97.67  Aligned_cols=61  Identities=28%  Similarity=0.457  Sum_probs=53.2

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      |+.+...++|+|||.++..+  +|+|++||++.|+.+. +.+||+++. .|+.|+||++||+++.
T Consensus         1 ~~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            1 MENDPNLFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSAYITPVN   62 (63)
T ss_dssp             CCCCTTEEEESSCBCCCSSS--BCCBCTTCEEEEEEECTTSSEEEEEE-TTEEEEEEGGGEEESC
T ss_pred             CCCCCEEEEEcceECCCCCC--ccCCCCCCEEEEEEeCCCCCeEEEEE-CCCeEEEehHHeEECC
Confidence            67777889999999877666  9999999999999954 567999998 8999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.66  E-value=8.7e-17  Score=134.36  Aligned_cols=86  Identities=23%  Similarity=0.362  Sum_probs=73.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCcccccc
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKT   84 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~   84 (143)
                      ..++|+|||++...+  ||+|++||++.|+++. +.+||.++. .|..|+||+|||+........ .||.+.|+|.+|++
T Consensus        44 ~~~~alyd~~~~~~~--els~~~gd~~~v~~~~~~~~w~~~~~-~~~~G~~P~~yv~~~~~le~~-~wyhg~i~r~~ae~  119 (495)
T 1opk_A           44 NLFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPVNSLEKH-SWYHGPVSRNAAEY  119 (495)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEESSSGGGS-TTEEEECCHHHHHH
T ss_pred             cEEEEeCCcCCCCCC--CCCccCCCEEEEeecCCCCCceeeee-cCCcceeccccccccccccch-hhhccCCCHHHHHH
Confidence            468999999977776  9999999999999987 779999997 688899999999987554433 59999999999999


Q ss_pred             ccCcCCCCCCceE
Q psy11791         85 RSYSEGNDKGGFV   97 (143)
Q Consensus        85 ll~~~g~~~G~F~   97 (143)
                      +|.. +.+ |.||
T Consensus       120 ll~~-~~~-G~fL  130 (495)
T 1opk_A          120 LLSS-GIN-GSFL  130 (495)
T ss_dssp             HGGG-CCT-TEEE
T ss_pred             HhhC-CCC-ceEE
Confidence            8854 444 9998

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.65  E-value=3.4e-16  Score=99.38  Aligned_cols=58  Identities=17%  Similarity=0.423  Sum_probs=50.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEe-cCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-KTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~-~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|++ ..+++||++++.+|+.|+||++||++..
T Consensus        11 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           11 GTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred             CCEEEEceeECcCCCC--cCCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence            4568999999977766  99999999999999 6788999999779999999999998754

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.65  E-value=3.6e-16  Score=95.83  Aligned_cols=56  Identities=16%  Similarity=0.544  Sum_probs=50.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+++
T Consensus         4 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            4 GSVVRAKFNFQQTNED--ELSFSKGDVIHVTRVEEGGWWEGTH-NGRTGWFPSNYVREI   59 (59)
T ss_dssp             CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECceeCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEEC
Confidence            4578999999977666  9999999999999998899999998 899999999999753

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.65  E-value=3.6e-16  Score=96.25  Aligned_cols=56  Identities=27%  Similarity=0.544  Sum_probs=50.7

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         4 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            4 HMRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKIL   59 (60)
T ss_dssp             SCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCcCCCC--CccCCCCCEEEEEEeCCCCeEEEEE-CCCEEEechHHEEEC
Confidence            4579999999977666  9999999999999998899999997 899999999999865

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.65  E-value=3.5e-16  Score=96.82  Aligned_cols=57  Identities=16%  Similarity=0.320  Sum_probs=50.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.++..+  +|+|++||+|.|+.+.+++||.+++ ..|+.|+||++||+++.
T Consensus         4 ~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A            4 QTHRAIFRFVPRHED--ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CCEEECSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECccCCccCcC--cCcCCCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEECc
Confidence            468999999977776  9999999999999998899999996 68999999999998753

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=6.9e-16  Score=97.28  Aligned_cols=59  Identities=22%  Similarity=0.492  Sum_probs=52.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 2dl4_A            6 SGNTYVALYKFVPQENE--DLEMRPGDIITLLEDSNEDWWKGKI-QDRIGFFPANFVQRLSG   64 (68)
T ss_dssp             CCCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCCSSEEEEEC-SSCEEEEETTTEEECCC
T ss_pred             CCCEEEEeeeECCCCcC--CcCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHeEECCC
Confidence            34578999999977666  9999999999999998899999995 89999999999998753

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.64  E-value=3.2e-16  Score=97.02  Aligned_cols=58  Identities=21%  Similarity=0.468  Sum_probs=51.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            4 KGSQVEALFSYEATQPE--DLEFQEGDIILVLSKVNEEWLEGES-KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CCEEEECCSCBCCCSSS--BCCBCSSCEEEEEEESSSSCEEEEC-SSCEEEECGGGCCCSC
T ss_pred             CCeEEEECCCCCcCCCC--CccCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEeHHHEEECC
Confidence            44679999999977666  9999999999999998889999995 8999999999998653

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.64  E-value=4.7e-16  Score=98.35  Aligned_cols=57  Identities=25%  Similarity=0.544  Sum_probs=51.7

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+...
T Consensus         3 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   59 (68)
T 2ew3_A            3 QPCCRGLYDFEPENQG--ELGFKEGDIITLTNQIDENWYEGMI-HGESGFFPINYVEVIV   59 (68)
T ss_dssp             CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEESSSSEEEEEE-TTEEEEEEGGGEEESC
T ss_pred             CCEEEEeeeECCCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEeeHHHEEEcC
Confidence            4578999999977666  9999999999999998889999998 8999999999999765

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.64  E-value=8.3e-16  Score=98.49  Aligned_cols=62  Identities=24%  Similarity=0.474  Sum_probs=54.3

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      |-.....++|+|||+++..+  +|+|++||+|.|+++.+++||.++.. .|+.|+||++||+.+.
T Consensus         1 m~~~~~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~   63 (73)
T 2lcs_A            1 MAIVNQRAVALYDFEPENDN--ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ   63 (73)
T ss_dssp             CCCCCEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECC
T ss_pred             CcccCCEEEECccCCCCCCC--ccCCcCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECC
Confidence            44556789999999977666  99999999999999988899999986 4899999999999875

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.64  E-value=1.5e-16  Score=120.11  Aligned_cols=82  Identities=18%  Similarity=0.400  Sum_probs=65.8

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCccccccc
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTR   85 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~l   85 (143)
                      .++|+|||.++..+  +|+|++||++.|+++. +.+||+++. +|+.|+||++||+...     ..||.+.|+|.+|+++
T Consensus         2 ~~~al~~~~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~~P~~yv~~~~-----~~w~~g~isr~~ae~l   73 (217)
T 1gri_A            2 EAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEMKP-----HPWFFGKIPRAKAEEM   73 (217)
T ss_dssp             EEEECSCBCCCSSS--CCCBCTTCEEEC------CCEEEEES-SSCEEEEEGGGEECCC-----CSSBCTTCCHHHHHHH
T ss_pred             EEEEeeccCCcCCC--cCCCCCCCEEEEEeccCCCCeEeecc-CCccceECCccccccc-----chhhcccCCHHHHHHH
Confidence            58999999977766  9999999999999886 678999985 8999999999998543     3599999999999998


Q ss_pred             cCcCCCCCCceE
Q psy11791         86 SYSEGNDKGGFV   97 (143)
Q Consensus        86 l~~~g~~~G~F~   97 (143)
                      |.. ++..|+|+
T Consensus        74 L~~-~~~~G~fL   84 (217)
T 1gri_A           74 LSK-QRHDGAFL   84 (217)
T ss_dssp             HHT-CSSTTCEE
T ss_pred             Hhc-cCCCceEE
Confidence            843 44458887

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.64  E-value=4.8e-16  Score=94.89  Aligned_cols=55  Identities=27%  Similarity=0.477  Sum_probs=49.9

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +++|+|||.++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            3 WARALYDFEALEED--ELGFRSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECccCCCCCcC--CCCCCCCCEEEEEEECCCCEEEEEE-CCeEEEeeHHHeEEcc
Confidence            68999999977666  9999999999999998899999998 8999999999998653

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.64  E-value=3.7e-16  Score=101.60  Aligned_cols=66  Identities=26%  Similarity=0.623  Sum_probs=51.9

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCC
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSN   68 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~   68 (143)
                      |......++|+|||+++..+  +|+|++||+|.|+++.+++||.++. .+|+.|+||++||+.+...+.
T Consensus         1 m~~~~~~~~Alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~   67 (79)
T 3cqt_A            1 MVQISTLFEALYDYEARTED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRLDY   67 (79)
T ss_dssp             ----CCCEEESSCBCCCSTT--BCCBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC-----
T ss_pred             CCccCcEEEECccCCCCCcC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCcccc
Confidence            44455679999999977666  9999999999999998899999998 578999999999998865433

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.64  E-value=3.5e-16  Score=96.22  Aligned_cols=56  Identities=21%  Similarity=0.521  Sum_probs=50.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||.++..+  +|+|++||++.|+++ +++||.+++.+|+.|+||++||+.+.
T Consensus         2 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~   57 (60)
T 1i07_A            2 KYAKSKYDFVARNSS--ELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR   57 (60)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEECccCCCCCCC--cccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEcc
Confidence            368999999977666  999999999999999 88999999878999999999999875

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.64  E-value=4.7e-16  Score=95.00  Aligned_cols=55  Identities=25%  Similarity=0.510  Sum_probs=49.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDPQQDG--DLGLKPGDKVQLLEKLSPEWYKGSC-NGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCcEEEeeHHHEEEc
Confidence            468999999876666  9999999999999998899999998 899999999999853

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.64  E-value=7.2e-16  Score=97.82  Aligned_cols=56  Identities=25%  Similarity=0.539  Sum_probs=50.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||+++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+...
T Consensus         3 ~~~~Alydy~a~~~~--eLs~~~Gd~i~vl~~~~~~~gWw~g~~-~g~~G~~P~~yV~~~~   60 (69)
T 2ydl_A            3 DYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLP   60 (69)
T ss_dssp             EEEEESSCBCCCSTT--BCCBCTTCEEEEEESCCSSTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             cEEEEcccCCCCCCC--ccccCCCCEEEEEEcCCCCCCEEEEEE-CCcEEEecHHHEEECC
Confidence            578999999977766  9999999999999986  789999997 8999999999999875

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.64  E-value=4.2e-16  Score=95.23  Aligned_cols=55  Identities=24%  Similarity=0.450  Sum_probs=49.2

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      .++|+|||.++..+  +|+|++||+|.|+++.+++||.++.. .|+.|+||++||+.+
T Consensus         2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            2 WATAEYDYDAAEDN--ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEECceECCCCCC--CcccCCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEEC
Confidence            47899999977666  99999999999999988899999985 399999999999864

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.64  E-value=5.5e-16  Score=95.32  Aligned_cols=57  Identities=25%  Similarity=0.444  Sum_probs=50.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ....++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            4 GSPQCKALYAYDAQDTD--ELSFNANDIIDIIKEDPSGWWTGRL-RGKQGLFPNNYVTKI   60 (60)
T ss_dssp             CSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCcEEEECccCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCEEEEEcHHHEEEC
Confidence            34578999999977666  9999999999999998899999999 899999999999753

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.64  E-value=1.2e-15  Score=97.62  Aligned_cols=59  Identities=22%  Similarity=0.271  Sum_probs=51.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|||||.+.+.+..+|+|++||+|.|+++.+.+||+++. +|+.|+||+|||+.+..
T Consensus        10 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A           10 GRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLL-NNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             EEEEECSCBCCCTTCCSBCCBCSSCEEEEEECCSSSCEEEEC-SSCEEEECSTTEEECCC
T ss_pred             eEEEEeeccCCCCCCCCccCCCCCCEEEEEEeCCCCeEEEEE-CCCEEEEeHHHEEECCC
Confidence            468999999976334459999999999999998889999987 89999999999998753

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=7.5e-16  Score=101.18  Aligned_cols=59  Identities=24%  Similarity=0.571  Sum_probs=52.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|+++.+.+||+++..+|+.|+||++||++..
T Consensus        18 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           18 EETVVIALYDYQTNDPQ--ELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             SSCEEEESSCCCCSCSS--BCCCCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred             CCeEEEECcCCCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence            34579999999977666  999999999999999888999999888999999999999863

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.63  E-value=1e-15  Score=96.10  Aligned_cols=61  Identities=18%  Similarity=0.403  Sum_probs=53.1

Q ss_pred             CCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcCCceeeee
Q psy11791          2 ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYK   64 (143)
Q Consensus         2 ~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPsnyv~~~~   64 (143)
                      ++....++|+|||+++..+  +|+|++||++.|+++.+++||+++... |+.|+||++||+.+.
T Consensus         3 ~p~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (67)
T 2o9s_A            3 DPFTGEAIAKFNFNGDTQV--EMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK   64 (67)
T ss_dssp             STTSEEEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred             CCCCEEEEECccCCcCCcC--ccCCCCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECC
Confidence            3455679999999977666  999999999999999888999999854 699999999999875

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.63  E-value=5.4e-16  Score=94.74  Aligned_cols=55  Identities=25%  Similarity=0.475  Sum_probs=49.9

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|+|||+++..+  +|+|++||++.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            3 EAIVEFDYQAQHDD--ELTISVGEIITNIRKEDGGWWEGQI-NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECcccCCCCcC--EeeECCCCEEEEEEeCCCCEEEEEE-CCeEEEEehHHeEEcC
Confidence            48899999877666  9999999999999998899999998 8999999999998763

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.63  E-value=5.6e-16  Score=98.69  Aligned_cols=61  Identities=33%  Similarity=0.618  Sum_probs=51.9

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      |......++|+|||.++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+++.
T Consensus         1 m~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   61 (73)
T 3thk_A            1 MGTGKELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLD   61 (73)
T ss_dssp             ----CCEEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCCCCEEEEECcCCCcCCCC--ccCCCCCCEEEEEECCCCCeEEEEE-CCcEEEEehHHeEECC
Confidence            44566789999999877666  9999999999999998889999996 7999999999999875

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=1.3e-15  Score=95.95  Aligned_cols=59  Identities=22%  Similarity=0.580  Sum_probs=52.5

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .....++|+|||+++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+.
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1x2k_A            5 SSGKVFRALYTFEPRTPD--ELYFEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAEQS   63 (68)
T ss_dssp             CCSEEEEESSCCCCCSTT--BCCCCSSCEEEEEECSCSSEEEEES-SSCEEEEETTTEEECC
T ss_pred             CCcEEEEECceECCCCCC--cccCCCCCEEEEEEcCCCCEEEEEE-CCcEEEEehHHeEEcC
Confidence            345678999999977666  9999999999999998889999997 8999999999999764

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.63  E-value=7.1e-16  Score=94.05  Aligned_cols=55  Identities=24%  Similarity=0.539  Sum_probs=50.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+++|+|||.++..+  +|+|++||++.|+.+.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            3 KFVQALFDFNPQESG--ELAFKRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECcCCCCCCCC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEechHHeEEC
Confidence            468999999977666  9999999999999998889999999 899999999999864

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.63  E-value=8.3e-16  Score=93.74  Aligned_cols=55  Identities=35%  Similarity=0.697  Sum_probs=50.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~   57 (58)
T 2drm_A            3 GIQVKALYDYDAQTGD--ELTFKEGDTIIVHQKDPAGWWEGEL-NGKRGWVPANYVQD   57 (58)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             CcEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEE
Confidence            3578999999977666  9999999999999998899999998 89999999999975

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.63  E-value=7.5e-16  Score=95.79  Aligned_cols=58  Identities=17%  Similarity=0.566  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A            5 SQLVVRAKFNFQQTNED--ELSFSKGDVIHVTRVEEGGWWEGTH-NGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCEEEEEccccCCcCcC--cccCCCCCEEEEeEecCCCEEEEEE-CCCEEEEehHHeEEcC
Confidence            44679999999877666  9999999999999998899999998 8999999999998764

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.63  E-value=7.4e-16  Score=96.63  Aligned_cols=55  Identities=25%  Similarity=0.549  Sum_probs=50.1

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|+|||.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||+|||+...
T Consensus         3 ~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~   57 (65)
T 2nwm_A            3 AARLKFDFQAQSPK--ELTLQKGDIVYIHKEVDKNWLEGEH-HGRLGIFPANYVEVLP   57 (65)
T ss_dssp             EEEECSCBCCCSTT--BCCBCTTCEEEEEECCTTTCEEEEE-TTEEEEECGGGEEECC
T ss_pred             EEEEeeeECCCCcC--ccCCcCCCEEEEEEecCCCEEEEEE-CCcEEEEehhhEEEcC
Confidence            58999999977666  9999999999999998899999996 8999999999999765

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.63  E-value=8.9e-16  Score=97.88  Aligned_cols=59  Identities=29%  Similarity=0.624  Sum_probs=52.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++ +++||++++.+|+.|+||++||+....
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (72)
T 2jw4_A            6 EEVVVVAKFDYVAQQEQ--ELDIKKNERLWLLDD-SKSWWRVRNSMNKTGFVPSNYVERKNS   64 (72)
T ss_dssp             CCEEEECSSCCCCSSTT--SCCCCTTCEEEEEEC-SSSSEEEECTTSCEEEECTTSCEECCC
T ss_pred             CCeEEEECcCCCcCCCC--cccCCCCCEEEEEEC-CCCEEEEEECCCCEEEEEhhHEEEcCC
Confidence            44679999999977766  999999999999997 569999997789999999999998754

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.63  E-value=9.8e-16  Score=95.28  Aligned_cols=58  Identities=22%  Similarity=0.422  Sum_probs=50.8

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ....+++|+|||+++..+  +|+|++||+|.|+.+.  +++||+++. +|+.|+||++||+.+
T Consensus         4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            4 GAKEYCRTLFPYTGTNED--ELTFREGEIIHLISKETGEAGWWKGEL-NGKEGVFPDNFAVQI   63 (64)
T ss_dssp             CSSEEEEESSCBCCSSSS--BCCBCTTCEEEEEESCSSSTTEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCCEEEEECccCCccCCC--ccCCCCCCEEEEEECCCCCCCEEEEEE-CCeEEEEeHHHEEEC
Confidence            345679999999977666  9999999999999885  678999997 899999999999865

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.63  E-value=7.6e-16  Score=97.64  Aligned_cols=57  Identities=28%  Similarity=0.616  Sum_probs=51.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEec--CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~--~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.+...+  +|+|++||+|.|+.+  .+++||.+++.+|+.|+||++||+.+.
T Consensus         7 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (71)
T 1u5s_A            7 HVVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             SEEEESSCCCCCSSS--BCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECC
T ss_pred             EEEEEcccCCCCCCC--cccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECC
Confidence            468999999877666  999999999999998  578999999779999999999999875

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.63  E-value=6.7e-16  Score=94.15  Aligned_cols=55  Identities=20%  Similarity=0.543  Sum_probs=50.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+++|+|||+++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            3 TYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCcC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCcEEEEchHHeEEC
Confidence            468999999977666  9999999999999998889999999 999999999999864

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.63  E-value=7.6e-16  Score=97.20  Aligned_cols=58  Identities=21%  Similarity=0.435  Sum_probs=51.8

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC---CCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~---~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+.+.   +++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   63 (69)
T 1wyx_A            3 NVLAKALYDNVAESPD--ELSFRKGDIMTVLEQDTQGLDGWWLCSL-HGRQGIVPGNRLKILVG   63 (69)
T ss_dssp             EEEEEESSCBCCSSTT--BCCBCTTCEEEEEETTGGGCTTEEEEEE-TTEEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCcCCCC--ccCCcCCCEEEEeECCCCCCCCcEEEEE-CCcEEEechhhEEECCC
Confidence            4578999999977666  9999999999999997   689999996 89999999999998753

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.63  E-value=8.8e-16  Score=96.85  Aligned_cols=57  Identities=21%  Similarity=0.472  Sum_probs=50.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||+++..+  +|+|++||+|.|++++ ++||+++..+|+.|+||++||+...
T Consensus         8 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~   64 (68)
T 2k2m_A            8 LKWVLCNYDFQARNSS--ELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPYP   64 (68)
T ss_dssp             CCEEEESSCBCCCSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEECC
T ss_pred             CEEEEECccCCCCCCC--cccCCCCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEcC
Confidence            4578999999977666  9999999999999985 7999999888999999999998764

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1.1e-15  Score=96.38  Aligned_cols=58  Identities=29%  Similarity=0.541  Sum_probs=51.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||+++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 2dmo_A            6 SGEAHRVLFGFVPETKE--ELQVMPGNIVFVLKKGNDNWATVMF-NGQKGLVPCNYLEPVS   63 (68)
T ss_dssp             CSEEEEECSSCCCCSSS--SCCCCTTCEEEECEECSSSCEEEEE-TTEEEEECSTTEEECC
T ss_pred             CCCEEEECcCCCcCCcC--CCCCCCCCEEEEEEeCCCCEEEEEe-CCCEEEeehHHeEECC
Confidence            34578999999977666  9999999999999998889999976 8999999999999875

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.63  E-value=1e-15  Score=94.73  Aligned_cols=56  Identities=21%  Similarity=0.557  Sum_probs=49.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~   62 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|++++ ++||++++ .+|+.|+||++||++
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~   61 (62)
T 2iim_A            5 QDNLVIALHSYEPSHDG--DLGFEKGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TTCEEEESSCBCCCSTT--BCCBCTTCEEEEEECC-SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCcEEEEcccCCCCCCC--CcCCCCCCEEEEEEcC-CCEEEEEECCCCCEEEEEHHHEEE
Confidence            44579999999876666  9999999999999985 49999997 589999999999975

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=1.1e-15  Score=96.26  Aligned_cols=58  Identities=28%  Similarity=0.660  Sum_probs=51.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|++++ ++||++++.+|+.|+||++||+.+.
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxt_A            6 SGLKMQVLYEFEARNPR--ELTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEPLS   63 (68)
T ss_dssp             CCEEEEESSCBCCCSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEEGGGEECCC
T ss_pred             CCeEEEECceECCCCcC--cCCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEhHHcEECC
Confidence            34579999999977666  9999999999999995 8999999779999999999998765

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.63  E-value=6.3e-16  Score=98.19  Aligned_cols=59  Identities=15%  Similarity=0.331  Sum_probs=52.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+.+++||.+++ ..|+.|+||++||+++.
T Consensus         5 ~~~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~   64 (71)
T 2fpf_A            5 HEQTHRAIFRFVPRHED--ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   64 (71)
T ss_dssp             CCCCEEECSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cCeEEEECeeECccCCC--cccCcCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECC
Confidence            34568999999977776  9999999999999998899999996 58999999999998875

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.62  E-value=3.1e-16  Score=98.95  Aligned_cols=58  Identities=29%  Similarity=0.505  Sum_probs=52.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.+...+  +|+|++||+|.|+++.+++||+++...|+.|+||++||++..
T Consensus         6 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            6 APTVVALYDYTANRSD--ELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             cCEEEECccCCCCCcC--cCCCCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            3468999999877666  999999999999999888999999878999999999999865

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.62  E-value=8.5e-16  Score=94.73  Aligned_cols=56  Identities=32%  Similarity=0.704  Sum_probs=50.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...++|+|||.++..+  +|+|++|+++.|+++.+++||+++. .|+.|+||++||+++
T Consensus         6 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~-~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            6 KELVLVLYDYQEKSPR--ELTVKKGDILTLLNSTNKDWWKIEV-NGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CCEEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CEEEEECcCCCCCCCC--CccCCCCCEEEEeEecCCCeEEEEE-CCEEEEEEHHHEEEC
Confidence            4578999999877666  9999999999999998899999997 899999999999864

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.1e-15  Score=96.81  Aligned_cols=60  Identities=23%  Similarity=0.483  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+..+|+|++||+|.|++. +.+||+++..+|+.|+||++||+.+.
T Consensus         4 ~~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (70)
T 2vkn_A            4 FIYKAKALYPYDADDDDAYEISFEQNEILQVSDI-EGRWWKARRANGETGIIPSNYVQLID   63 (70)
T ss_dssp             CEEEEEESSCBCCCSSSTTBCCBCTTCEEEEECT-TSSEEEEECTTSCEEEEEGGGEEEEE
T ss_pred             cCEEEEECccCCCCCCCCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEehHHEEECC
Confidence            3457899999997665556999999999999987 67999999879999999999999875

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=93.40  Aligned_cols=54  Identities=24%  Similarity=0.655  Sum_probs=49.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..++|+|||.+...+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||++
T Consensus         4 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            4 KVFRALYTFEPRTPD--ELYFEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAE   57 (58)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             EEEEECccCCCCCCC--CccCCCCCEEEEEEeCCCCEEEEEE-CCCEEEEehHHEEe
Confidence            468999999977666  9999999999999998889999998 89999999999975

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.62  E-value=8.1e-16  Score=94.03  Aligned_cols=56  Identities=27%  Similarity=0.480  Sum_probs=50.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||.++..+  +|+|++||++.|+++.+++||.++... |+.|+||++||+.+
T Consensus         2 ~~~~al~d~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            2 QRAVALYDFEPENDN--ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEEECSCBCCCSTT--BCCBCTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CEEEECccCCCCCCC--CcCCCCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            468999999877666  999999999999999888999999865 89999999999864

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.2e-15  Score=98.64  Aligned_cols=60  Identities=30%  Similarity=0.477  Sum_probs=52.7

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .....++|+|||+++..+  +|+|++||+|.|+++.+ ++||+++...|+.|+||++||+.+.
T Consensus        11 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   71 (78)
T 2dl5_A           11 NYPLTCKVVYSYKASQPD--ELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPT   71 (78)
T ss_dssp             TSSEEEEECSCBCCCSTT--BCCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSC
T ss_pred             cCCcEEEEceeECCCCCC--CCCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECC
Confidence            345679999999977666  99999999999999974 8999999966999999999998765

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.62  E-value=1.1e-15  Score=100.45  Aligned_cols=58  Identities=33%  Similarity=0.633  Sum_probs=51.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus        16 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   73 (83)
T 1neg_A           16 GKELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLA   73 (83)
T ss_dssp             -CCEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CceEEEEccccCCCCCC--ccccCCCCEEEEEEecCCCEEEEEE-CCeEEEEEHHHEEECC
Confidence            34578999999977666  9999999999999998889999965 8999999999999875

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.62  E-value=8.2e-16  Score=96.74  Aligned_cols=60  Identities=17%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +..+++|||||.++..+..+|+|++||+|.|+.+.+++||+++. +|+.|+||++||+.+.
T Consensus         5 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~   64 (67)
T 2eyx_A            5 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGEC-NGKRGHFPFTHVRLLD   64 (67)
T ss_dssp             CSCBEEECCCBCCCTTCSSBCCBCSSEEEEEEEECTTSEEEEEE-TTEEEEEEGGGBCCBC
T ss_pred             CCEEEEEeEEECCCCCCCCccccCCCCEEEEEEecCCCEEEEEE-CCCEEEEehHhEEEcC
Confidence            44578999999977335559999999999999998889999987 8999999999998764

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.62  E-value=6.6e-16  Score=95.03  Aligned_cols=55  Identities=20%  Similarity=0.437  Sum_probs=49.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCcee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~   59 (60)
T 2gnc_A            5 SPEFAIAKFDYVGRSAR--ELSFKKGASLLLYHRASEDWWEGRH-NGIDGLVPHQYIV   59 (60)
T ss_dssp             -CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEEEGGGEE
T ss_pred             CCEEEEECCCCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCeEEEEeHhhEE
Confidence            45679999999977666  9999999999999998889999998 8999999999996

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.62  E-value=7.9e-16  Score=95.81  Aligned_cols=57  Identities=25%  Similarity=0.508  Sum_probs=50.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+.+
T Consensus         8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B            8 LGITAIALYDYQAAGDD--EISFDPDDIITNIEMIDDGWWRGVC-KGRYGLFPANYVELR   64 (65)
T ss_dssp             CCSCEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CceEEEEEeeECCCCcC--EeeEecCCEEEEEEecCCCEEEEEE-CCcEEEEehHHeEEC
Confidence            34568999999877666  9999999999999998889999996 899999999999864

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.62  E-value=1.2e-15  Score=97.18  Aligned_cols=57  Identities=28%  Similarity=0.649  Sum_probs=51.1

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+++.+.+||+++.. .|+.|+||++||+++
T Consensus        15 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           15 VTLFVALYDYEAITED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             TCEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEEECccCCCCCCC--cceEeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEEC
Confidence            3578999999877766  99999999999999988899999985 789999999999864

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=1.3e-15  Score=96.96  Aligned_cols=58  Identities=21%  Similarity=0.481  Sum_probs=52.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+.+.+||+++. +|+.|+||++||+.+.
T Consensus         8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   65 (72)
T 2dl8_A            8 EPIEAIAKFDYVGRTAR--ELSFKKGASLLLYQRASDDWWEGRH-NGIDGLIPHQYIVVQD   65 (72)
T ss_dssp             SCEEEEESSCBCCSSSS--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEECSSSEEECC
T ss_pred             CCEEEEECccCCcCCCC--EeccCCCCEEEEEeecCCCEEEEEE-CCEEEEEchHHeEEcC
Confidence            44679999999977666  9999999999999998889999999 8999999999999765

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.62  E-value=1.3e-15  Score=93.32  Aligned_cols=56  Identities=34%  Similarity=0.634  Sum_probs=49.5

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEe-CCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIR-SSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~-~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||.++..+  +|+|++||++.|+++. +++||+++. .+|+.|+||++||+.
T Consensus         2 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~   59 (60)
T 2v1q_A            2 MERGIVQYDFMAESQD--ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP   59 (60)
T ss_dssp             CCEEEECSCBCCCSTT--BCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEEeeeECCCCCC--CccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEE
Confidence            3578999999877666  9999999999999984 889999998 478999999999975

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.62  E-value=8.7e-16  Score=100.89  Aligned_cols=63  Identities=22%  Similarity=0.534  Sum_probs=53.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCC
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSN   68 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~   68 (143)
                      +...++|+|||.++..+  +|+|++||+|.|+.+.+.+||+++. .+|+.|+||++||+.+.....
T Consensus         5 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~   68 (84)
T 4ag1_C            5 GVTLFVALYDYNATRWT--DLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSIQG   68 (84)
T ss_dssp             -CCEEEESSCBCCSBTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTTCC-
T ss_pred             CCEEEEEcccCCCCCCC--cccccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCCccc
Confidence            34578999999877666  9999999999999998889999998 488999999999998765443

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.62  E-value=1.4e-15  Score=97.09  Aligned_cols=59  Identities=25%  Similarity=0.556  Sum_probs=52.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus        12 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~   70 (73)
T 3c0c_A           12 DQPSCKALYDFEPENDG--ELGFREGDLITLTNQIDENWYEGML-HGQSGFFPLSYVQVLVP   70 (73)
T ss_dssp             CSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             CCeEEEECccCCCCCCC--CccCcCCCEEEEEEecCCCEEEEEE-CCCEEEeChHHEEECCC
Confidence            34578999999977666  9999999999999998899999998 89999999999998764

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.62  E-value=1.1e-15  Score=94.65  Aligned_cols=57  Identities=19%  Similarity=0.478  Sum_probs=50.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+..
T Consensus         4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   60 (62)
T 1uj0_A            4 MARRVRALYDFEAVEDN--ELTFKHGELITVLDDSDANWWQGEN-HRGTGLFPSNFVTTD   60 (62)
T ss_dssp             CCEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEESC
T ss_pred             CCeEEEECccCCCCCcC--CcCCCCCCEEEEEEeCCCCEEEEEE-CCCEEEechhHEEEe
Confidence            45678999999977666  9999999999999998889999998 688999999999753

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.61  E-value=1.2e-15  Score=93.74  Aligned_cols=54  Identities=28%  Similarity=0.572  Sum_probs=48.6

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..++|+|||.++..+  +|+|++||+|.|+++.  +++||.++. +|+.|+||++||+.
T Consensus         4 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   59 (60)
T 1oot_A            4 PKAVALYSFAGEESG--DLPFRKGDVITILKKSDSQNDWWTGRV-NGREGIFPANYVEL   59 (60)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSCTTSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             cEEEECccCCcCCcC--EeeEcCCCEEEEEEeCCCCCCeEEEEE-CCEEEEEeHHHEEE
Confidence            468999999876666  9999999999999986  679999998 89999999999975

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.61  E-value=4.4e-16  Score=97.71  Aligned_cols=55  Identities=18%  Similarity=0.437  Sum_probs=50.1

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|+|||+++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+...
T Consensus         3 ~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~   57 (65)
T 2fei_A            3 QCKVLFEYIPQNED--ELELKVGDIIDINEEVEEGWWSGTL-NNKLGLFPSNFVKELE   57 (65)
T ss_dssp             EEECSSCCCCCSTT--BCCCCTTCEEECCCCSSSSEEEEES-SSCEEEEETTTSCBCC
T ss_pred             EEEECccCCcCCcC--ccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEecHHHEEEcC
Confidence            68999999977666  9999999999999998899999986 8999999999998765

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.61  E-value=9.7e-16  Score=96.37  Aligned_cols=58  Identities=26%  Similarity=0.500  Sum_probs=51.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+.+.+++||++++.+|+.|+||++||+.+.
T Consensus        10 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           10 GEEYIAVGDFTAQQVG--DLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CEEEEECSCBCCSSSS--CCCBCSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             CCEEEEcccCCCCCCC--cCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            4568999999877666  999999999999999888999999778999999999998753

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.61  E-value=1.2e-15  Score=95.89  Aligned_cols=58  Identities=14%  Similarity=0.197  Sum_probs=50.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||.+++.+..+|+|++||+|.|+.+.+.+||+++. +|+.|+||++||+.+.
T Consensus         2 ~~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~   59 (67)
T 2bzy_A            2 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFD   59 (67)
T ss_dssp             EEEEECSCBCSEEECTTBCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             cEEEEeeeECCCCCCCCccccCCCCEEEEEEecCCCeEEEEe-CCcEEEEehHHeEECC
Confidence            468999999877223349999999999999998889999987 8999999999999875

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.61  E-value=1.6e-15  Score=95.40  Aligned_cols=58  Identities=22%  Similarity=0.387  Sum_probs=51.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||++...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 2djq_A            6 SGPRAKALCNYRGKNPG--DLKFNKGDVILLRRQLDENWYQGEI-NGVSGIFPASSVEVIS   63 (68)
T ss_dssp             SCCEEEECSCCCSCCTT--CCCCCTTCEEEEEECCCSSEEEEEE-TTEEEEEESSSEETTC
T ss_pred             CceEEEECCCCCCCCcC--CccCCCCCEEEEEEecCCCEEEEEE-CCcEEEeehHHEEEcC
Confidence            34578999999876666  9999999999999998899999996 8999999999998765

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.61  E-value=1.6e-15  Score=97.43  Aligned_cols=60  Identities=22%  Similarity=0.517  Sum_probs=52.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC--Cce------EEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS--GKP------FYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~--g~~------G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|+++.+++||+++...  |+.      |+||++||+++..
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~   73 (77)
T 2d8j_A            6 SGQYFVALFDYQARTAE--DLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSG   73 (77)
T ss_dssp             CCEEEEESSCBCCSSSS--BCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCC
T ss_pred             CCCEEEEccCCCCCCCC--ccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcCC
Confidence            34679999999977766  999999999999999889999999865  888      9999999998764

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.61  E-value=1.5e-15  Score=92.38  Aligned_cols=55  Identities=16%  Similarity=0.424  Sum_probs=49.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||.++..+  +|+|++||++.|+++.+.+||+++. .|+.|+||++||++.
T Consensus         2 ~~a~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            2 IPAFVXFAYVAERED--ELSLVXGSRVTVMEXCSDGWWRGSY-NGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEEECSCBCCCSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECccCCCCCCC--EeeEeCCCEEEEeEcCCCCEEEEEE-CCcEEEEehHHEEEC
Confidence            468999999877666  9999999999999998889999965 899999999999865

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.61  E-value=1.5e-15  Score=95.71  Aligned_cols=57  Identities=12%  Similarity=0.274  Sum_probs=49.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CC---ceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SG---KPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g---~~G~vPsnyv~~~   63 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++.+++||+++.. .|   +.|+||+|||+..
T Consensus         7 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFPYKSDYED--DLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSCBCCSCTT--BCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECeeECcCCcC--CCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            3478999999977666  99999999999999888999999973 34   8999999999864

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.3e-15  Score=98.08  Aligned_cols=58  Identities=19%  Similarity=0.401  Sum_probs=52.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+.+||+++. +|+.|+||++||+.+.
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (76)
T 2epd_A            9 GVVEAVACFAYTGRTAQ--ELSFRRGDVLRLHERASSDWWRGEH-NGMRGLIPHKYITLPA   66 (76)
T ss_dssp             CCEEEEESSCEECSSTT--BCEECTTCEEEEEEEEETTEEEEEE-TTEEEEEESSSEECCS
T ss_pred             CCEEEEECcCCCCCCCC--ccCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHEEEcC
Confidence            44679999999977666  9999999999999998889999998 8999999999999775

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=3.2e-15  Score=98.82  Aligned_cols=61  Identities=13%  Similarity=0.175  Sum_probs=52.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||++.+.+..+|+|++||+|.|+++.+.+||+++. +|+.|+||++||+.+..
T Consensus        15 ~~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~~   75 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFDP   75 (88)
T ss_dssp             CCEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEECTTSCEEEEC-SSCEEEECTTTEEECCS
T ss_pred             CCEEEEEcccccCCCCCCCcccCCCCCEEEEEEecCCCEEEEEe-CCCEEEEehHHeEECCC
Confidence            44579999999855334449999999999999998889999976 89999999999998753

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.61  E-value=2e-15  Score=95.27  Aligned_cols=57  Identities=21%  Similarity=0.466  Sum_probs=50.6

Q ss_pred             eEEEEeeccC-CCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFD-YSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~-~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||+ +...+  +|+|++||++.|+++.+++||.++... |+.|+||++||+.+.
T Consensus         3 ~~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   61 (69)
T 1ruw_A            3 PKFEAAYDFPGSGSSS--ELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYK   61 (69)
T ss_dssp             SEEEESSCBCCCSCTT--BCCBCTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCCCCCC--cccCCCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcC
Confidence            4689999995 76666  999999999999999888999999864 899999999998765

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.61  E-value=2.9e-15  Score=94.17  Aligned_cols=58  Identities=19%  Similarity=0.496  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 2dl3_A            6 SGRPARAKFDFKAQTLK--ELPLQKGDIVYIYKQIDQNWYEGEH-HGRVGIFPRTYIELLS   63 (68)
T ss_dssp             CSEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSTTEEEEEC-SSCEEEEETTTEEECC
T ss_pred             CCcEEEECccCCCCCcC--CccCCCCCEEEEeEecCCCEEEEEE-CCCEEEEchHHEEECC
Confidence            34679999999977666  9999999999999998889999995 8999999999999875

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=1.1e-15  Score=96.37  Aligned_cols=58  Identities=24%  Similarity=0.527  Sum_probs=51.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||.++..+  +|+|++||+|.|++++ ++||++++.+|+.|+||++||+.+.
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A            6 SGKYVKILYDFTARNAN--ELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             SCCCEECSSCBCCSSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCC
T ss_pred             CCEEEEECccCCCCCCC--ccCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECC
Confidence            34468999999977666  9999999999999985 8899999878999999999998764

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.61  E-value=1.6e-15  Score=98.56  Aligned_cols=59  Identities=17%  Similarity=0.278  Sum_probs=51.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCC-ceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~-WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|||||+++..+  +|+|++||+|.|+++.+.+ ||+++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   68 (80)
T 2i0n_A            9 FAKYARALKDYNVSDTS--LLPFKRNDIITITFKDQENKWFMGQL-NGKEGSFPVDHVEILLS   68 (80)
T ss_dssp             CCCEEEESSCBCCCSSS--SCCBCSSEEEEEEEESSSSSEEEEEE-TTEEEEEEGGGEEEESS
T ss_pred             CCeEEEECCCCCcCCCC--CcCCCCCCEEEEEEecCCCCEEEEEE-CCcEEEechHHEEECCC
Confidence            34578999999977666  9999999999999998777 999996 89999999999998753

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=2.1e-15  Score=94.86  Aligned_cols=57  Identities=25%  Similarity=0.489  Sum_probs=51.1

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+.
T Consensus         7 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1x2p_A            7 GEEFVAIADYAATDET--QLSFLRGEKILILRQTTADWWWGER-AGCCGYIPANHVGKHS   63 (68)
T ss_dssp             CCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEC-TTCCEEEESSSEECCC
T ss_pred             CCEEEECceECCCCcC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCeEEEEehHHeEECC
Confidence            4578999999877666  9999999999999998899999996 7999999999998764

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.61  E-value=4.7e-16  Score=101.35  Aligned_cols=59  Identities=27%  Similarity=0.513  Sum_probs=52.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||+.+..
T Consensus        17 ~~~~~~Alydy~a~~~~--eLsf~~Gd~I~Vl~~~~~gWw~g~~-~g~~G~fP~nyV~~~~~   75 (79)
T 1z9q_A           17 AAPRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKILKD   75 (79)
T ss_dssp             SCCCEEESSCCCCSSTT--BCCCCTTCCBCCCEESSSSEEEEEE-TTEEEEEEGGGEEESSC
T ss_pred             CceEEEEcCccCCCCCC--cccccCCCEEEEeEecCCCEEEEEE-CCeEEEecHHHEEECCC
Confidence            34568999999977666  9999999999999998899999997 89999999999998753

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.61  E-value=1.5e-15  Score=94.07  Aligned_cols=55  Identities=27%  Similarity=0.431  Sum_probs=49.8

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEec-CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|+|||.++..+  +|+|++||+|.|+.+ .+++||.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   58 (62)
T 2j6f_A            3 DYIVEYDYDAVHDD--ELTIRVGEIIRNVKKLQEEGWLEGEL-NGRRGMFPDNFVKEIK   58 (62)
T ss_dssp             CEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECccCCcCCcC--CcCCcCCCEEEEEEecCCCCEEEEEE-CCcEEEechHHEEECC
Confidence            48999999977666  999999999999998 7889999997 8999999999999765

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.61  E-value=3.1e-15  Score=94.72  Aligned_cols=59  Identities=32%  Similarity=0.625  Sum_probs=52.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+. +++||+++.. +|+.|+||++||+.+.
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (71)
T 2jt4_A            5 SKKRGIVQYDFMAESQD--ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVR   65 (71)
T ss_dssp             CCEEEEECSCBCCSSTT--BCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCCEEEEcccCCCCCCC--cccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECC
Confidence            34678999999877666  9999999999999987 8899999984 7899999999999765

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.61  E-value=2.8e-15  Score=96.48  Aligned_cols=58  Identities=24%  Similarity=0.496  Sum_probs=51.7

Q ss_pred             eEEEEeeccCCC-CCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYS-TKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~-~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||+++ ..+  +|+|++||+|.|+.++ +.+||++++.+|+.|+||++||+.+..
T Consensus        10 ~~~~al~dy~~~~~~~--eLs~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~   69 (77)
T 2enm_A           10 TKARVMYDFAAEPGNN--ELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPN   69 (77)
T ss_dssp             EEEEESSCCCCCTTSS--BCCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECC
T ss_pred             cEEEECccCCCCCCCC--eecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCC
Confidence            578999999976 555  9999999999999986 789999997799999999999998753

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=3.2e-15  Score=95.36  Aligned_cols=58  Identities=24%  Similarity=0.413  Sum_probs=51.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec---CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~---~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++   .+.+||+++. .|+.|+||++||+.+.
T Consensus         7 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   67 (73)
T 2dl7_A            7 GVCFVKALYDYEGQTDD--ELSFPEGAIIRILNKENQDDDGFWEGEF-NGRIGVFPSVLVEELS   67 (73)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCCSSSSSCEEEEE-TTEEEEECSSSEEECC
T ss_pred             CCEEEEECccCCcCCCC--cCCCCCCCEEEEEECCCCCCCCcEEEEE-CCCEEEEChHHEEECC
Confidence            34578999999977766  999999999999998   3679999995 8999999999999875

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.60  E-value=1.1e-15  Score=93.73  Aligned_cols=56  Identities=29%  Similarity=0.533  Sum_probs=48.3

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||+++..+  +|+|++||++.|+++.+ ++||.++...|+.|+||++||+.
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~   59 (60)
T 2x3w_D            3 GVRVRALYDYDGQEQD--ELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA   59 (60)
T ss_dssp             -CEEEECSCBCCSSSS--BCCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC
T ss_pred             CCEEEECcccCccCCC--cccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEE
Confidence            3568999999977666  99999999999998854 58999998669999999999975

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.60  E-value=1.3e-15  Score=94.81  Aligned_cols=56  Identities=34%  Similarity=0.656  Sum_probs=49.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC---C----CceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS---S----GKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~---~----g~~G~vPsnyv~~~   63 (143)
                      .+++|+|||.++..+  +|+|++||+|.|+.+.+++||.++..   +    |+.|+||++||+.+
T Consensus         2 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEcccCCccCCC--CCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            468999999977666  99999999999999988999999874   1    78999999999864

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.2e-15  Score=95.38  Aligned_cols=58  Identities=19%  Similarity=0.482  Sum_probs=51.6

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC---CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~---~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++.   +.+||+++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (71)
T 2cre_A            6 SGLLARALYDNCPDCSD--ELAFSRGDILTILEQHVPESEGWWKCLL-HGRQGLAPANRLQILS   66 (71)
T ss_dssp             CCEEEEESSCCCCSSSS--BCCCCSSCCEEEEESCCTTSTTEEEEES-SSCCEEEETTTEEECC
T ss_pred             CcEEEEECcccCcCCCC--CCCCCCCCEEEEeEcCCCCCCCcEEEEE-CCCEEEEehHHEEECC
Confidence            44679999999877666  9999999999999997   789999994 8999999999999875

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.60  E-value=1.8e-15  Score=96.57  Aligned_cols=59  Identities=22%  Similarity=0.537  Sum_probs=52.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|+.+.+.+||+++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (73)
T 2dbm_A            6 SGPCCRALYDFEPENEG--ELGFKEGDIITLTNQIDENWYEGML-HGHSGFFPINYVEILVA   64 (73)
T ss_dssp             CCCEEEESSCBCCCSTT--CCCBCTTCEEECCBCSSSSEEEEEE-TTEEEEEESSSEEESSC
T ss_pred             CCCEEEEccccCCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCCEEEechHHEEEccC
Confidence            45679999999977666  9999999999999998889999998 89999999999998753

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=97.45  Aligned_cols=58  Identities=12%  Similarity=0.301  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+.
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   64 (80)
T 2ekh_A            7 GATSYMTCSAYQKVQDS--EISFPAGVEVQVLEKQESGWWYVRF-GELEGWAPSHYLVLDE   64 (80)
T ss_dssp             SCEEEEECSCBCCSSTT--SCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEETTTEECCC
T ss_pred             CCCEEEECCCCCCCCCC--ccCcCCCCEEEEEEeCCCCeEEEEE-CCCEEEEEhHHeEECC
Confidence            34578999999877666  9999999999999998889999997 7999999999999765

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.60  E-value=2e-15  Score=94.27  Aligned_cols=57  Identities=11%  Similarity=0.246  Sum_probs=50.0

Q ss_pred             eEEEEeeccCC-CCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~-~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.+ +..+  +|+|++||+|.|+.+.+++||++++ .+|+.|+||++||+.+.
T Consensus         6 ~~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            6 RRVRAILPYTKVPDTD--EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             CEEEESSCBCCCTTSS--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCCCCCC--cCcCCCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            46899999987 6666  9999999999999998889999994 47899999999998653

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.60  E-value=1e-15  Score=96.59  Aligned_cols=59  Identities=25%  Similarity=0.469  Sum_probs=51.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+.+||+++...+..|+||++||+.+.
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~   64 (69)
T 2eqi_A            6 SGRTVKALYDYKAKRSD--ELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDIS   64 (69)
T ss_dssp             CCCEEEESSCBCCCSSS--CCCBCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECC
T ss_pred             CCcEEEECeeECCCCcC--ccCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECc
Confidence            34579999999877666  999999999999998888999999865556999999999875

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.60  E-value=9e-16  Score=93.60  Aligned_cols=53  Identities=26%  Similarity=0.560  Sum_probs=47.9

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeC-CCceEEEcCCcee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRS-SGKPFYVPASYVE   61 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~-~g~~G~vPsnyv~   61 (143)
                      .++|+|||.++..+  +|+|++||++.|+.+.+ ++||+++.. +|+.|+||++||+
T Consensus         3 ~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            3 ENKVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CCEECSCBCCCSTT--BCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             EEEEeeeECCcCCC--cccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            47899999977666  99999999999999886 799999987 7899999999996

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=2.7e-15  Score=96.41  Aligned_cols=58  Identities=14%  Similarity=0.259  Sum_probs=50.8

Q ss_pred             CceEEEEeeccCCCC-------CCCCceecCCCCEEEEEe-cCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYST-------KDGKYVRIQEGEKLFLIK-KTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~-------~~~~eLs~~~Gd~l~vl~-~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++.       .+  +|+|++||+|.|+. ..+++||.++. +|+.|+||+|||+.+.
T Consensus         6 ~~~~~~Alydy~~~~~~~~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A            6 SGKIMIAALDYDPGDGQMGGQGKG--RLALRAGDVVMVYGPMDDQGFYYGEL-GGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             CSEEEEESSCBCTTTTCCCSSSCC--BCCBCTTCEEEEESCCCTTCEEEEES-SSCEEEEETTTEEECC
T ss_pred             CCcEEEECCCCCCCccccCCCCCC--cceECCCCEEEEeEccCCCCEEEEEE-CCcEEEEChHHeEEcc
Confidence            345789999999777       55  99999999999997 46889999998 8999999999999764

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=1.8e-15  Score=96.85  Aligned_cols=55  Identities=16%  Similarity=0.496  Sum_probs=49.3

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+.+.+++||+++. .|+.|+||++||++
T Consensus        17 ~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           17 ARKVRAIYDFEAAEDN--ELTFKAGEIITVLDDSDPNWWKGET-HQGIGLFPSNFVTA   71 (72)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEC-SSCEEECTTCCEEE
T ss_pred             CeEEEECCccCCCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCCEEEechhhCcc
Confidence            3568999999977666  9999999999999988889999998 78899999999974

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.60  E-value=3.2e-15  Score=99.15  Aligned_cols=58  Identities=28%  Similarity=0.608  Sum_probs=51.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEec--CCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~--~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++  .+.+||++++.+|+.|+||++||+.+..
T Consensus        18 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   77 (91)
T 1wx6_A           18 HVVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   77 (91)
T ss_dssp             EEEEESSCCCCSSSS--BCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEE
T ss_pred             EEEEEeecCCcCCCC--cccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCC
Confidence            468999999977666  999999999999998  5789999997789999999999998764

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.60  E-value=2.3e-15  Score=91.67  Aligned_cols=54  Identities=17%  Similarity=0.428  Sum_probs=48.2

Q ss_pred             EEEEeecc-CCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcCCceee
Q psy11791          7 TLKVLYDF-DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf-~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPsnyv~~   62 (143)
                      .++|+||| .+...+  +|+|++||+|.|+.+.+++||.++... |+.|+||++||++
T Consensus         2 ~~~al~d~~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGSGSPS--ELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCCSCTT--BCCBCTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            58999999 766666  999999999999999888999999854 8999999999974

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=3.3e-15  Score=97.35  Aligned_cols=58  Identities=10%  Similarity=0.229  Sum_probs=50.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCC-CceEEEeC-CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ...|+|||||++...+  +|+|++||+|.|+++.++ +||++++. .|+.|+||++||++..
T Consensus        17 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           17 GTQCITKCEHTRPKPG--ELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             TCEEEESSCBSSCCTT--CCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCEEEECCCCCcCCCC--CCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            3468999999877666  999999999999998765 89999974 7999999999998765

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.60  E-value=1.5e-15  Score=91.45  Aligned_cols=52  Identities=19%  Similarity=0.428  Sum_probs=47.0

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCcee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      .++|+|||+++..+  +|+|++||+|.|+.+.+ ++||+++. +|+.|+||++||+
T Consensus         2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEAQGDD--EISIDPGDIITVIRGDDGSGWTYGEC-DGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCCCSTT--BCCBCTTCEEEEEECCCSSSEEEEEE-TTEEEEEEGGGBC
T ss_pred             EEEECccCCcCCCC--CccCCCCCEEEEEEecCCCCEEEEEE-CCeEEEeeHHHcC
Confidence            47899999977666  99999999999999985 79999999 9999999999984

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.60  E-value=3.3e-15  Score=94.50  Aligned_cols=58  Identities=24%  Similarity=0.527  Sum_probs=51.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++.  +++||+++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   65 (70)
T 2da9_A            6 SGDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLS   65 (70)
T ss_dssp             SSEEEEECSCCCCSSTT--BCCCCTTEEEEEEECCCSSTTEEEEEC-SSCEEEEEGGGEEECC
T ss_pred             CCcEEEECcCCCCCCcC--EeeEcCCCEEEEEECCCCCCCeEEEEE-CCcEEEechHHeEECC
Confidence            45679999999977666  9999999999999985  789999996 8999999999999775

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=99.03  Aligned_cols=58  Identities=17%  Similarity=0.474  Sum_probs=51.8

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...++|||||+++..+  +|+|++||+|.|+++.+.+||+++. .|+.|+||++||+....
T Consensus        17 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   74 (88)
T 1x2q_A           17 ARKVRALYDFEAVEDN--ELTFKHGEIIIVLDDSDANWWKGEN-HRGIGLFPSNFVTTNLN   74 (88)
T ss_dssp             CEEEEESSCCCCCSSS--CCCCCSSCEEEEEECSCSSSEEEEE-TTEEEEECGGGEESCSS
T ss_pred             CeEEEEcccCCCCCcC--ccCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHEEEcCC
Confidence            4578999999977666  9999999999999998889999998 68899999999997654

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.60  E-value=1.9e-15  Score=93.13  Aligned_cols=57  Identities=23%  Similarity=0.504  Sum_probs=49.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceE-EEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF-YVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G-~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+.+.+++||.++. .|+.| +||++||+.+.
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            3 KSAVKALFDYKAQRED--ELTFTKSAIIQNVEKQDGGWWRGDY-GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCCEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEEGGGEEECC
T ss_pred             CCEEEECcCCCcCCCC--CcCCcCCCEEEEEEecCCCEEEEEE-CCeEEEEEChHHcEECC
Confidence            3468999999877666  9999999999999998889999998 67665 99999998764

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.60  E-value=1.6e-15  Score=94.25  Aligned_cols=58  Identities=17%  Similarity=0.414  Sum_probs=50.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.+...+  +|+|++||+|.|+++.+++||.++. .|+.|+||++||+++.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            6 KKRQCKVLFEYIPQNED--ELELKVGDIIDINEEVEEGWWSGTL-NNKLGLFPSNFVKELE   63 (65)
T ss_dssp             --CEEEECSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCeEEEEeeeeCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCCEEEeehHHEEECc
Confidence            34579999999877666  9999999999999998889999996 8999999999998764

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.8e-15  Score=99.14  Aligned_cols=59  Identities=19%  Similarity=0.435  Sum_probs=53.0

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +....++|+|||+++..+  +|+|++||+|.|+++.+++||+++. .|+.|+||++||+.+.
T Consensus        15 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   73 (88)
T 2cub_A           15 DLNMPAYVKFNYMAERED--ELSLIKGTKVIVMEKCSDGWWRGSY-NGQVGWFPSNYVTEEG   73 (88)
T ss_dssp             CCCEEEEESSCCCCCSTT--BCCCCTTEEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCCCEEEEccccCCCCCC--CcCCCCCCEEEEEEccCCCeEEEEE-CCcEEEEehHHEEECC
Confidence            345679999999977666  9999999999999998889999998 8999999999999875

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=3.6e-15  Score=94.13  Aligned_cols=59  Identities=15%  Similarity=0.426  Sum_probs=52.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||++++. .|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct3_A            6 SGTPYRAMYQYRPQNED--ELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVS   65 (70)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETT
T ss_pred             CCcEEEECccCCcCCcC--CccCCCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECC
Confidence            45678999999977666  99999999999999988899999986 5899999999998764

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=3e-15  Score=96.13  Aligned_cols=57  Identities=18%  Similarity=0.367  Sum_probs=50.5

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC---CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS---SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~---~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++ .+  +|+|++||+|.|+++.+.+||+++..   .|+.|+||++||+++.
T Consensus        10 ~~~~~alydy~~~-~~--eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~   69 (75)
T 2egc_A           10 KDVYVSIADYEGD-EE--TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKN   69 (75)
T ss_dssp             CEEEEECSCBCCC-SS--SCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECC
T ss_pred             CeEEEECCCcCCC-CC--cCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECC
Confidence            4578999999876 55  99999999999999988899999986   3689999999999875

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.59  E-value=3.7e-15  Score=94.98  Aligned_cols=58  Identities=24%  Similarity=0.525  Sum_probs=51.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+.
T Consensus         8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   67 (73)
T 2k9g_A            8 SKDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLP   67 (73)
T ss_dssp             SCEEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CccEEEECccCCCCCCC--eeeECCCCEEEEEECCCCCCCEEEEEE-CCeEEEEchHHEEECC
Confidence            45679999999977666  9999999999999985  789999997 8999999999999875

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.59  E-value=2.6e-15  Score=96.53  Aligned_cols=59  Identities=20%  Similarity=0.445  Sum_probs=51.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC--CceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS--GKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~--g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||.++..+  +|+|++||+|.|+++.+++||+++...  |+.|+||++||+.+.
T Consensus         9 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~   69 (76)
T 2ed1_A            9 KVRRVKTIYDCQADNDD--ELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILS   69 (76)
T ss_dssp             CCEEEEESSCCCCSSSS--BCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECC
T ss_pred             CCeEEEECccCCCCCcC--CcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECC
Confidence            34579999999977766  999999999999998888999999733  599999999999875

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.59  E-value=3e-16  Score=98.57  Aligned_cols=59  Identities=22%  Similarity=0.600  Sum_probs=52.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+.+.+||++++.+|+.|+||++||++..
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A            7 ELKKVVALYDYMPMNAN--DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCCEEEBSSCCCCSSSS--SCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCeEEEECccCCCCCCC--CccCCCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEcC
Confidence            34578999999877666  999999999999999888999999778999999999998653

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.59  E-value=2.7e-15  Score=97.17  Aligned_cols=57  Identities=21%  Similarity=0.515  Sum_probs=50.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC----CCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~----~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||+++..+  +|+|++||+|.|+.+.+    .+||+++. .|+.|+||++||+.+.
T Consensus        13 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   73 (79)
T 1uhc_A           13 NQVYFAVYTFKARNPN--ELSVSANQKLKILEFKDVTGNTEWWLAEV-NGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             SCCEEESSCBCCCSSS--BCCBCTTCEEEEEESCCTTSCTTEEEEES-SSCEEEEEGGGEEECC
T ss_pred             CeEEEECccCCCCCCC--ccCCCCCCEEEEEECCCCCCCCCeEEEEe-CCCEEEEchHHeEECC
Confidence            3468999999977766  99999999999999876    79999984 8999999999999865

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=3e-15  Score=97.10  Aligned_cols=58  Identities=28%  Similarity=0.482  Sum_probs=50.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||+++..+  +|+|++||+|.|++. +.+||++++. +|+.|+||+|||+++.
T Consensus        16 ~~~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~~P~~yv~~~~   74 (79)
T 2cud_A           16 DSDFLAVLSDYPSPDIS--PPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVARVS   74 (79)
T ss_dssp             CCCEEEESSCSSCTTTS--CCSSCTTCEEEEEEE-ETTEEEEEETTTCCEEEEEGGGEEEEC
T ss_pred             CCeEEEEccCCCCCCCC--cCCCCCCCEEEEEec-CCCeEEEEECCCCCEEEeeHHHeEEcc
Confidence            34579999999977766  999999999999984 6789999975 5899999999998764

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=4e-15  Score=96.77  Aligned_cols=59  Identities=20%  Similarity=0.438  Sum_probs=52.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|+++.+.+||+++. .|+.|+||++||+.+..
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   67 (81)
T 2ysq_A            9 SIVSAEAVWDHVTMANR--ELAFKAGDVIKVLDASNKDWWWGQI-DDEEGWFPASFVRLWVN   67 (81)
T ss_dssp             CCEEEEESSCCCCSSSS--SCCCCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEESSC
T ss_pred             CceEEEEeeeECCCCCC--cCCCCCCCEEEEEEEcCcCEEEEEE-CCCEEEechHHEEEcCC
Confidence            34578999999877666  9999999999999998899999997 79999999999998753

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.59  E-value=2.4e-15  Score=93.14  Aligned_cols=56  Identities=21%  Similarity=0.504  Sum_probs=49.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||.++..+  +|+|++||+|.|+.+.+++||+++.. .|+.|+||++||+.+
T Consensus         7 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            7 RTYRAMYDYSAQDED--EVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             -CEEESSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEEECeeeCCcCCC--cCCCCCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEEC
Confidence            358999999876666  99999999999999988899999987 789999999999864

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.59  E-value=1.5e-15  Score=97.33  Aligned_cols=58  Identities=21%  Similarity=0.532  Sum_probs=50.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++. +.+||.++. +|+.|+||++||+...
T Consensus         8 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A            8 GSMEAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             --CEEEESSCBCCSSTT--BCCBCTTCEEECCBCSSCSSEEEEEE-TTEEEEEEGGGEEEEC
T ss_pred             CCeEEEECccCCCCCCC--eeeEcCCCEEEEeEecCCCCEEEEEE-CCCEEEEehHhEEEcC
Confidence            34579999999977766  9999999999999987 668999997 8999999999999764

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.59  E-value=2.1e-15  Score=99.35  Aligned_cols=55  Identities=29%  Similarity=0.686  Sum_probs=49.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++ +++||++++.+|+.|+||++||++
T Consensus        31 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           31 EVIVIAKWDYTAQQDQ--ELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CEEEEESSCCCCCSSS--BCCCCTTEEEEEEEC-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             ceEEEECccCCCCCCC--EeccCCCCEEEEEec-CCCeEEEEECCCCEEEeehHHEEe
Confidence            3679999999977666  999999999999998 679999997789999999999974

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.59  E-value=4.8e-15  Score=95.67  Aligned_cols=58  Identities=22%  Similarity=0.407  Sum_probs=52.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+.+||.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (78)
T 2yuo_A            6 SGRRAKALLDFERHDDD--ELGFRKNDIITIISQKDEHCWVGEL-NGLRGWFPAKFVEVLD   63 (78)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEEC
T ss_pred             CceEEEECccCCCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCCEEEEehHHEEECC
Confidence            34579999999977666  9999999999999988899999997 8999999999999875

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.59  E-value=2.8e-15  Score=99.64  Aligned_cols=56  Identities=16%  Similarity=0.516  Sum_probs=50.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-----CCCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-----~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||+++..+  ||+|++||+|.|+++.     +++||+++..+|+.|+||++||+.
T Consensus        29 ~~~~~Alydy~a~~~~--ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           29 GPVWTAVFDYEAAGDE--ELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             CCEEEECSCBCCSSTT--BCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC
T ss_pred             CcEEEECCccCCCCCC--ccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCcC
Confidence            3578999999977776  9999999999999985     789999998789999999999963

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=5e-15  Score=93.65  Aligned_cols=57  Identities=32%  Similarity=0.558  Sum_probs=50.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-CCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|||||+++..+  +|+|++||+|.|+++.+ ++||+++...|+.|+||++||+...
T Consensus         8 ~~~~alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct4_A            8 GHCVAIYHFEGSSEG--TISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS   65 (70)
T ss_dssp             CEEEESSCBCCCSTT--CCCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECC
T ss_pred             CEEEEcccCCCCCCC--cCCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcC
Confidence            468999999977666  99999999999999864 4699999866999999999998765

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.58  E-value=2e-15  Score=95.92  Aligned_cols=59  Identities=20%  Similarity=0.456  Sum_probs=51.0

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC--CCce---EEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKP---FYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~---G~vPsnyv~~~~   64 (143)
                      .....++|+|||.++..+  +|+|++||+|.| ++.+++||.++..  +|+.   |+||++||++..
T Consensus         8 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A            8 HLGPKYVGLWDFKSRTDE--ELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             SCCCEEECCTTCBCSSTT--SCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CCCcEEEEcccCCCCCcC--CcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            345579999999877666  999999999999 8888899999986  6899   999999998753

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=3.5e-15  Score=96.62  Aligned_cols=58  Identities=24%  Similarity=0.510  Sum_probs=51.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|||||.++..+  +|+|++||+|.|+++.+.+||+++. +|+.|+||++||+.+.
T Consensus        16 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   73 (79)
T 1x69_A           16 LGITAVALYDYQAAGDD--EISFDPDDIITNIEMIDDGWWRGVC-KGRYGLFPANYVELRQ   73 (79)
T ss_dssp             CCCCEEESSCCCCSSSS--BCCCCTTCEEEEEEECSSSEEEEEE-TTEEEEEETTSEEECC
T ss_pred             CCeEEEECccCCCCCCC--CcCcCCCCEEEEeEecCCCeEEEEE-CCcEEEechHHEEECC
Confidence            34568999999877666  9999999999999998889999996 8999999999999875

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=3.5e-15  Score=97.95  Aligned_cols=58  Identities=14%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec--CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~--~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||+++..+  +|+|++||+|.|+.+  .+.+||+++. .|+.|+||++||+.+.
T Consensus         7 ~~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~   66 (85)
T 2dlp_A            7 GSGYVIALRSYITDNCS--LLSFHRGDLIKLLPVATLEPGWQFGSA-GGRSGLFPADIVQPAA   66 (85)
T ss_dssp             CCCEEEESSCBCCSSSS--BCCBCTTCEEEECCCSCCCTTEEEEES-SSCEEEEETTSEEECC
T ss_pred             CCEEEEECCCCCccCcC--CccCcCCCEEEEEEccCCCCCeEEEEE-CCEEEEechHHeEECC
Confidence            34579999999977666  999999999999987  7889999998 8999999999999875

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=5.1e-15  Score=95.70  Aligned_cols=56  Identities=27%  Similarity=0.586  Sum_probs=50.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+.+.
T Consensus        18 ~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   73 (78)
T 2ed0_A           18 EKVVAIYDYTKDKED--ELSFQEGAIIYVIKKNDDGWYEGVM-NGVTGLFPGNYVESIS   73 (78)
T ss_dssp             EEEEECSCBCCSSTT--BCCBCSSCEEEEEEECSSSEEEEEE-TTEEEEEETTSEEECS
T ss_pred             EEEEECccCCccCcC--cccccCCCEEEEEEeCCCCEEEEEE-CCcEEEeChHHEEEcC
Confidence            468999999977666  9999999999999998889999996 9999999999999764

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=7.3e-15  Score=95.04  Aligned_cols=58  Identities=28%  Similarity=0.512  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||.++. .|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (79)
T 2yun_A            6 SGRLCKALYSFQARQDD--ELNLEKGDIVIIHEKKEEGWWFGSL-NGKKGHFPAAYVEELP   63 (79)
T ss_dssp             CSEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSCEEEES-SSCEEEECSTTEEEES
T ss_pred             CCCEEEECccCCcCCCC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCCEEEEEhHHeEECC
Confidence            34679999999977666  9999999999999998889999995 8999999999999875

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.58  E-value=5.4e-15  Score=96.94  Aligned_cols=59  Identities=22%  Similarity=0.653  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~   65 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++. ++||+++. .+|+.|+||++||+.+..
T Consensus        24 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~   83 (86)
T 2oi3_A           24 EDIIVVALYDYEAIHHE--DLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   83 (86)
T ss_dssp             TSEEEEESSCCCCSSSS--CCCCCTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred             CCcEEEECccCCCCCCC--cCcCCCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEccc
Confidence            34679999999977766  9999999999999997 59999998 578999999999998754

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.58  E-value=9.4e-15  Score=94.65  Aligned_cols=60  Identities=20%  Similarity=0.359  Sum_probs=52.2

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC----CceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS----GKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~----g~~G~vPsnyv~~~~   64 (143)
                      +...+++|+|||.++..+  +|+|++||+|.|+++.+++||+++...    |+.|+||++||+.+.
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~   68 (80)
T 1ue9_A            5 SSGEIAQVTSAYVASGSE--QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG   68 (80)
T ss_dssp             SCCEEEEECSCCCCCSTT--BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECC
T ss_pred             CCCeEEEECcccCCCCCC--CCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECC
Confidence            345679999999876666  999999999999999889999999853    499999999999875

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.58  E-value=2.2e-15  Score=95.81  Aligned_cols=54  Identities=30%  Similarity=0.706  Sum_probs=47.1

Q ss_pred             EEEEeeccCCCCCCCC-ceecCCCCEEEEEecCC-----CCceEEEeCCCceEEEcCCceee
Q psy11791          7 TLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTN-----KDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf~~~~~~~~-eLs~~~Gd~l~vl~~~~-----~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      .++|+|+|.++  +.+ ||+|++||+|.|+++.+     ++||+++..+|++|+||+|||+.
T Consensus         9 ~~~aly~y~a~--~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~   68 (69)
T 1nm7_A            9 FARALYDFVPE--NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI   68 (69)
T ss_dssp             CEEECSCCCCS--STTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEE
T ss_pred             EEEEEecccCC--CCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEE
Confidence            47999998854  445 99999999999999875     49999999889999999999975

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.58  E-value=4e-15  Score=94.24  Aligned_cols=56  Identities=16%  Similarity=0.318  Sum_probs=50.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||.++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||++||+.+.
T Consensus        14 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   69 (72)
T 4glm_A           14 TYGVALYRFQALEPN--ELDFEVGDKIRILATLEDGWLEGSL-KGRTGIFPYRFVKLCP   69 (72)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEECSTTEEEEEE-TTEEEEEEGGGEEEEC
T ss_pred             eEEEECccCCCCCCC--cCCCCCCCEEEEEEccCCCEEEEEE-CCcEEEEChHHeEECC
Confidence            468999999877666  9999999999999998889999996 8999999999999875

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.58  E-value=4e-15  Score=93.85  Aligned_cols=57  Identities=30%  Similarity=0.624  Sum_probs=51.1

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++.+++||.++. .|+.|+||++||+.+.
T Consensus         8 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   64 (69)
T 2dil_A            8 AQEYRALYDYTAQNPD--ELDLSAGDILEVILEGEDGWWTVER-NGQRGFVPGSYLEKLS   64 (69)
T ss_dssp             CCEEECCSCBCCSSSS--SCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CcEEEECccCCccCcC--ccCCCCCCEEEEEECCCCCEEEEEE-CCCEEEEehHHeEEcC
Confidence            3468999999977666  9999999999999998889999998 6999999999998764

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.58  E-value=2.5e-15  Score=96.60  Aligned_cols=59  Identities=19%  Similarity=0.555  Sum_probs=52.6

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....+++|+|||+++..+  +|+|++||+|.|+++.+.+||.++. +|+.|+||++||+.+.
T Consensus         8 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (76)
T 1ujy_A            8 SHQLIVKARFNFKQTNED--ELSVCKGDIIYVTRVEEGGWWEGTL-NGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CCCEEEECCSCBCCSSTT--SCCBCSSCCEEESSCCSSSCEEEEE-TTEEEEECTTTSEECC
T ss_pred             CCCEEEEECccCCcCCCC--cccCCCCCEEEEEEecCCCEEEEEE-CCCEEEechHHEEECC
Confidence            345679999999977666  9999999999999988889999997 8999999999999875

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.57  E-value=3.4e-15  Score=93.68  Aligned_cols=59  Identities=17%  Similarity=0.356  Sum_probs=50.3

Q ss_pred             CceEEEEeeccCC-CCCCCCceecCCCCEEEEEec-CCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~-~~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.+ +..+  +|+|++||+|.|+.+ .+++||.++.. .|+.|+||++||+.+.
T Consensus         5 ~~~~~~al~dy~a~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            5 KKQKVKTIFPHTAGSNKT--LLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCCEEEESSCBCCSSCSS--BCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CCEEEEEeecCCCCCCCC--CCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            3457899999985 6665  999999999999986 68899999985 4899999999998753

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=3e-15  Score=94.64  Aligned_cols=59  Identities=17%  Similarity=0.414  Sum_probs=51.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-CceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+++.+++||+++... |+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ecz_A            6 SGGEAIAKFNFNGDTQV--EMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIS   65 (70)
T ss_dssp             CCBCEEESSCCCCCSTT--BCCCCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESS
T ss_pred             CCCEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECC
Confidence            34568999999977666  999999999999998888999999854 699999999999775

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.57  E-value=3.8e-15  Score=93.44  Aligned_cols=58  Identities=16%  Similarity=0.313  Sum_probs=48.8

Q ss_pred             CceEEEEeeccCCCCCCCCc-eecCCCCEEEEEec-CCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKY-VRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~e-Ls~~~Gd~l~vl~~-~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      ....++|+|||++...+  + |+|++||+|.|+.+ .+++||++++. +|+.|+||+|||+.+
T Consensus         6 ~~~~~~al~dy~~~~~~--e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            6 GRMRVKAIFSHAAGDNS--TLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CCCEEEESSCBCCCSCT--TBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCeEEEEccccCCCCCC--CCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            34579999999866544  6 99999999999965 57799999964 899999999999865

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=5.5e-15  Score=94.33  Aligned_cols=58  Identities=21%  Similarity=0.448  Sum_probs=50.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|+++.  +.+||+++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   65 (73)
T 2dm1_A            6 SGGTAVARYNFAARDMR--ELSLREGDVVRIYSRIGGDQGWWKGET-NGRIGWFPSTYVEEEG   65 (73)
T ss_dssp             SSSEEEESSCBCCCSTT--BCCBCTTCEEECCBSSSSSSSCEEEEE-TTEEEEECSSSEEECC
T ss_pred             CCCEEEECccCCcCCCC--cCCCCCCCEEEEEEecCCCCCeEEEEE-CCeEEEeehHHEEEcC
Confidence            34579999999977666  9999999999999987  449999997 8999999999999865

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=95.76  Aligned_cols=58  Identities=10%  Similarity=0.249  Sum_probs=50.9

Q ss_pred             ceEEEEeeccCC-CCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~-~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|||||.+ +..+  +|+|++||+|.|+.+.+++||++++ ..|+.|+||+|||+.+.
T Consensus         7 ~~~~~Alydy~~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~   66 (71)
T 2gqi_A            7 GRRVRAILPYTKVPDTD--EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVS   66 (71)
T ss_dssp             CCCEEESSCCCCCTTSS--CCCCCTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEECC
T ss_pred             CCEEEECcccCCCCCCC--CCCCCCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEECC
Confidence            346899999987 6666  9999999999999998889999994 47899999999999764

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=4.9e-15  Score=93.88  Aligned_cols=58  Identities=24%  Similarity=0.466  Sum_probs=51.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+++||.++.. |+.|+||++||+.+.
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~-g~~G~~P~~yv~~~~   64 (71)
T 2dnu_A            7 GEEKYVTVQPYTSQSKD--EIGFEKGVTVEVIRKNLEGWWYIRYL-GKEGWAPASYLKKAK   64 (71)
T ss_dssp             CSEEEECSSCBCCSSTT--BCCBCTTCEEEECCCCSSSEEEEEET-TEEEEEEGGGCEECC
T ss_pred             CCCEEEECCccCCCCCC--CCcCCCCCEEEEeECCCCCeEEEEEC-CcEEEEEHHHeEEcc
Confidence            34578999999877666  99999999999999888899999995 999999999999875

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.57  E-value=2.9e-15  Score=94.74  Aligned_cols=58  Identities=19%  Similarity=0.432  Sum_probs=50.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++ +++||+++. +|+.|+||++||+.+..
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (69)
T 1uhf_A            7 GGEEYIALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTGSI-GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             CSEEEECSSCBCCSSSS--BCCBCTTCEEEECEE-ETTEEEECS-TTCCEEECGGGCEECCC
T ss_pred             CCCEEEEeeeECCCCcC--ccCCCCCCEEEEEEe-CCCEEEEEe-CCcEEEEchHHeEECCC
Confidence            34578999999877666  999999999999988 789999985 89999999999997753

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.57  E-value=1.5e-15  Score=95.52  Aligned_cols=57  Identities=14%  Similarity=0.441  Sum_probs=51.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+.+.+++||+++. +|+.|+||++||+.+.
T Consensus         7 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   63 (68)
T 1wi7_A            7 GRRCQVAFSYLPQNDD--ELELKVGDIIEVVGEVEEGWWEGVL-NGKTGMFPSNFIKELS   63 (68)
T ss_dssp             CCCEEESSCBCCSSTT--BCCBCTTCEECCCEEEETTEEEECS-TTCCEEEETTSEEECC
T ss_pred             CCEEEECccCCcCCCC--CccCcCCCEEEEEEcCCCCeEEEEE-CCcEEEEchHHEEECC
Confidence            3468999999977666  9999999999999988889999986 8999999999999875

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.56  E-value=8.2e-15  Score=95.28  Aligned_cols=58  Identities=22%  Similarity=0.436  Sum_probs=51.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+.++  +.+||+++. .|+.|+||++||+.+.
T Consensus        16 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   75 (81)
T 1x43_A           16 NNRKARVLYDYDAANST--ELSLLADEVITVFSVVGMDSDWLMGER-GNQKGKVPITYLELLN   75 (81)
T ss_dssp             CCEEEEESSCCCCSSTT--BCCCCTTCEEEEECCTTCCTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCeEEEEcccCCCCCCC--cCCCCCCCEEEEEEcCCCCCCcEEEEE-CCCEEEEehHHEEECC
Confidence            34578999999977776  9999999999999984  589999996 8999999999999875

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.56  E-value=2.7e-15  Score=95.59  Aligned_cols=56  Identities=20%  Similarity=0.323  Sum_probs=49.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEec-CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|||||+++..+  +|+|++||+|.|+.+ .+.+||+++. +|+.|+||++||+.+.
T Consensus        11 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   67 (72)
T 1ugv_A           11 RKAKALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTL-NGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSCBCCCSSS--BCCBCTTCEEBSCCBCSSTTEEEEES-SSCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCcCCC--EeCCcCCCEEEEEEecCCCCeEEEEE-CCcEEEecHHHEEECC
Confidence            468999999977666  999999999999984 5779999985 8999999999999875

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.56  E-value=4.7e-15  Score=93.60  Aligned_cols=58  Identities=17%  Similarity=0.330  Sum_probs=51.3

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||.++..+  +|+|++||+|.|+++.+++||++++ ..|+.|+||++||+.+.
T Consensus         7 ~~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2cuc_A            7 GNMFVALHTYSAHRPE--ELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVS   65 (70)
T ss_dssp             SCCEECCSCBCCCSTT--BCCBCTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECC
T ss_pred             CcEEEECeeECcCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECc
Confidence            4568999999877666  9999999999999998889999994 58899999999999765

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=8.3e-15  Score=94.90  Aligned_cols=57  Identities=14%  Similarity=0.308  Sum_probs=51.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+++ +++||+++.. .|+.|+||++||+.+.
T Consensus        17 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~gW~~g~~~~~g~~G~fP~~yv~~~~   74 (79)
T 1x6b_A           17 LPQVEITKAFFAKQAD--EVTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFIS   74 (79)
T ss_dssp             CCEEEESSCCCCCSSS--BCCCCTTEEEEEEEE-ETTEEEEEETTTCCEEEECGGGCEEEE
T ss_pred             CCEEEECeeECCCCcC--CcCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEchHHEEECC
Confidence            3568999999877666  999999999999999 8899999986 7899999999999875

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.56  E-value=5.7e-15  Score=93.87  Aligned_cols=59  Identities=15%  Similarity=0.335  Sum_probs=50.9

Q ss_pred             CceEEEEeeccCC-CCCCCCceecCCCCEEEEEec-CCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~-~~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ....++|||||.+ +..+  +|+|++||+|.|+.+ .+.+||+++.. .|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~a~~~~~--eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   67 (72)
T 1spk_A            6 SGQKVKTIFPHTAGNNKT--LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             CSCEEECSSCBCCSSCSS--BCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             CceEEEEeeeeCCCCCCC--CCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            3457899999985 5666  999999999999987 68899999985 3899999999999875

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=5.8e-15  Score=95.74  Aligned_cols=58  Identities=29%  Similarity=0.590  Sum_probs=51.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC--CCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~--~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+++.+  ++||+++. +|+.|+||++||+...
T Consensus        16 ~~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   75 (80)
T 2d8h_A           16 QPIEVTALYSFEGQQPG--DLNFQAGDRITVISKTDSHFDWWEGKL-RGQTGIFPANYVTMNS   75 (80)
T ss_dssp             SCEEEECSSCEECSSTT--BCEECTTCEEEEEECCSCSSSEEEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CCEEEEECccCCcCCCC--eeeEcCCCEEEEeECcCCCCCeEEEEE-CCEEEEEchhHeEEcC
Confidence            34578999999977766  99999999999999875  79999999 8999999999998764

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.56  E-value=3.2e-15  Score=100.40  Aligned_cols=57  Identities=12%  Similarity=0.269  Sum_probs=50.6

Q ss_pred             eEEEEeeccCCCC------CCCCceecCCCCEEEEE-ecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYST------KDGKYVRIQEGEKLFLI-KKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~------~~~~eLs~~~Gd~l~vl-~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|||||+++.      .+  +|+|++||+|.|+ .+.+++||+++..+|+.|+||+|||+.+.
T Consensus        18 ~~~~Alydy~~~~~~~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~   81 (96)
T 1wie_A           18 HLCVARYSYNPFDGPNENPEA--ELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             EEEEESSCCCGGGSSCSCTTT--BCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             cEEEECCccCCCcccCCCCCC--eeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcC
Confidence            4689999998765      55  9999999999999 76788999999878999999999999775

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.56  E-value=7.6e-15  Score=100.93  Aligned_cols=59  Identities=19%  Similarity=0.339  Sum_probs=49.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEec-C--CCCceEEEeCC-------CceEEEcCCceeeeecc
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-T--NKDWWQVIRSS-------GKPFYVPASYVEVYKKL   66 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~-~--~~~WW~~r~~~-------g~~G~vPsnyv~~~~~~   66 (143)
                      ..++|||||.++..+  +|+|++||+|.|+.+ .  +++||.++...       |+.|+||+|||++....
T Consensus        23 ~~~~Alydy~a~~~~--ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~~~   91 (108)
T 1i1j_A           23 SMAVALQDYMAPDCR--FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTL   91 (108)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEEC
T ss_pred             eEEEECCccCCCCCC--ccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcccc
Confidence            468999999977666  999999999999998 2  33599999743       89999999999987643

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.56  E-value=5.6e-15  Score=96.92  Aligned_cols=58  Identities=17%  Similarity=0.389  Sum_probs=50.1

Q ss_pred             ceEEEEeecc-CCCCCCCCceecCCCCEEEEEecCCCCceEEEeCC-----CceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDF-DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf-~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-----g~~G~vPsnyv~~~~   64 (143)
                      ...++|+||| .++..+  +|+|++||+|.|+++.+++||+++...     |+.|+||++||+.+.
T Consensus        18 ~~~~~Alydy~~a~~~~--eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           18 SLKVRALKDFWNLHDPT--ALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             CEEEEESSCBCCCSCTT--BCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CeEEEEccccCCCCCCC--cccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            3468999999 666555  999999999999999888999999853     699999999998764

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.55  E-value=6.5e-15  Score=98.25  Aligned_cols=58  Identities=22%  Similarity=0.383  Sum_probs=51.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..+++|||||+++..+  ||+|++||+|.|+++.  +.+||+++. +|+.|+||++||+.+..
T Consensus         5 ~~~~~Alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   64 (93)
T 1uff_A            5 SSGYRALYPFEARNHD--EMSFNSGDIIQVDEKTVGEPGWLYGSF-QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CCCEEESSCBCCCSSS--CCCBCTTCEEEECSSCCCSSSEEEEEE-TTEEEEEETTTEEECCS
T ss_pred             CEEEEECccCCCCCCC--CcCCCCCCEEEEeEccCCCCCEEEEEE-CCCEEEechHHeEEcCC
Confidence            3468999999977666  9999999999999886  679999996 89999999999998764

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=4.9e-15  Score=93.69  Aligned_cols=56  Identities=27%  Similarity=0.504  Sum_probs=50.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++.+++||.++. .|+.|+||++||+.+.
T Consensus         9 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   64 (70)
T 2ega_A            9 EQYVVVSNYKKQENS--ELSLQAGEVVDVIEKNESGWWFVST-SEEQGWVPATYLEAQN   64 (70)
T ss_dssp             BCEECCSCCCCCSSS--SCCCCTTCBCEEEEECTTSEEEEEC-SSCEEEEEGGGCEESC
T ss_pred             cEEEECceECCCCCC--cccCCCCCEEEEEEccCCCeEEEEE-CCCEEEEehHHcEECC
Confidence            358999999877666  9999999999999998899999997 7899999999999765

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.55  E-value=1.8e-16  Score=102.26  Aligned_cols=57  Identities=23%  Similarity=0.568  Sum_probs=50.7

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..+++|+|||+++..+  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||++.
T Consensus        20 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~   76 (77)
T 1awj_A           20 ETLVIALYDYQTNDPQ--ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVEK   76 (77)
T ss_dssp             SSCCCCCCCBCCCCTT--SCCBCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCCC
T ss_pred             ceEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEEc
Confidence            3468999999977666  99999999999999988899999977899999999999753

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=8.4e-15  Score=97.10  Aligned_cols=57  Identities=28%  Similarity=0.498  Sum_probs=50.8

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++.+++||+++.. .|+.|+||++||+.+.
T Consensus        18 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   75 (90)
T 2yup_A           18 GEAVAQYTFKGDLEV--ELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSR   75 (90)
T ss_dssp             EEEEECSCCCCCSSS--BCCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEE
T ss_pred             eEEEEeecCCcCCcC--cCCCCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcC
Confidence            468999999876666  99999999999999888899999983 3899999999999875

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.55  E-value=4e-15  Score=97.22  Aligned_cols=62  Identities=21%  Similarity=0.396  Sum_probs=51.1

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEec---------------CCCCceEEEeCC-CceEEEcCCceeeee
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---------------TNKDWWQVIRSS-GKPFYVPASYVEVYK   64 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~---------------~~~~WW~~r~~~-g~~G~vPsnyv~~~~   64 (143)
                      |......++|+|||.++..+  +|+|++||+|.|+.+               ++.+||++++.. |+.|+||++||+.+.
T Consensus         1 ~s~~~~~~~Alydy~~~~~~--eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A            1 MSAEGYQYRALYDYKKEREE--DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             -CCEEEEEEECSCBCCCSTT--BCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CCCCCcEEEEccccCCCCCC--ccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECC
Confidence            44556789999999877666  999999999999954               234899998764 899999999999875

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=9.1e-15  Score=94.06  Aligned_cols=60  Identities=15%  Similarity=0.284  Sum_probs=50.3

Q ss_pred             CceEEEEeeccCCCCC-----CCCceecCCCCEEEEEecCCC-CceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTK-----DGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~-----~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..     ...+|+|++||+|.|+.+.+. +||.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   71 (76)
T 2csi_A            6 SGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGEL-NGQKGLVPSNFLEEVS   71 (76)
T ss_dssp             CSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEE-TTEEEEEEGGGCCBCC
T ss_pred             CccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEE-CCcEEEEehHHEEECC
Confidence            3457899999997761     034999999999999998764 7999998 8999999999998764

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.55  E-value=1.2e-14  Score=92.90  Aligned_cols=57  Identities=14%  Similarity=0.423  Sum_probs=50.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.+...+  +|+|++||+|.|++++ ++||+++. +|+.|+||++||+.+.
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~-~g~~G~~P~~yv~~~~   65 (74)
T 1j3t_A            9 ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQ-ENWWFGEV-HGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEEEC-SSEEEEES-TTCCCEEEGGGEEECC
T ss_pred             CCeEEEECCCCCCCCCC--ccCCCCCCEEEEEecC-CCEEEEEE-CCcEEEEchHHeEECC
Confidence            34579999999877666  9999999999999984 78999997 8999999999999875

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.9e-14  Score=95.98  Aligned_cols=58  Identities=19%  Similarity=0.410  Sum_probs=50.8

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC--C--CCceEEEe-CCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--N--KDWWQVIR-SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~--~~WW~~r~-~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  ||+|++||+|.|+.+.  +  ++||++++ ..|+.|+||+|||+.+.
T Consensus        16 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   78 (94)
T 2e5k_A           16 HETLQVIYPYTPQNDD--ELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKAD   78 (94)
T ss_dssp             CEEEEECSCBCCSSSS--BCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECC
T ss_pred             CeEEEECCcCCCCCCC--CcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcc
Confidence            4578999999977766  9999999999999883  4  89999996 58999999999999875

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.54  E-value=1.1e-14  Score=94.17  Aligned_cols=58  Identities=29%  Similarity=0.639  Sum_probs=50.0

Q ss_pred             ceEEEEeeccCCCCCCCC-ceecCCCCEEEEEecCCC-----CceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTNK-----DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~-eLs~~~Gd~l~vl~~~~~-----~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||++  .+.. +|+|++||+|.|+.+.+.     +||+++..+|+.|+||++||+.+.
T Consensus        14 ~~~~~alydy~~--~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           14 LEFARALYDFVP--ENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             CEEEEESSCBCC--SSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC-
T ss_pred             CEEEEECccCCC--CCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcC
Confidence            357899999874  4556 999999999999999876     899999878999999999998764

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.54  E-value=5.7e-15  Score=94.26  Aligned_cols=53  Identities=32%  Similarity=0.578  Sum_probs=47.8

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ++|+|||.+ ..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         3 a~alydy~~-~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   55 (73)
T 2kxd_A            3 APPLPPYSA-GGR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLD   55 (73)
T ss_dssp             CCCCCSSCC-CSC--CCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEeeeeCC-CCC--EeeEcCCCEEEEEEecCCCEEEEEE-CCCEEEEehHHeEEcC
Confidence            689999985 444  9999999999999998899999986 8999999999999875

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.54  E-value=3.3e-15  Score=99.86  Aligned_cols=58  Identities=14%  Similarity=0.440  Sum_probs=51.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||+|||+.+.
T Consensus        17 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~V~~~~~~gWw~g~~-~g~~G~fPsnyV~~~~   74 (92)
T 2o2o_A           17 RRRRCQVAFSYLPQNDD--ELELKVGDIIEVVGEVEEGWWEGVL-NGKTGMFPSNFIKELS   74 (92)
T ss_dssp             SSCEEEECSCBCCCSSS--CCCBCSSCEEECCCGGGSSCBCCEE-TTEECCBCSSSEECCS
T ss_pred             CCeEEEEccccCCCCCc--cccccCCCEEEEeEecCCCEEEEEE-CCeEEEeehHHEEECC
Confidence            34578999999977666  9999999999999998889999997 8999999999999875

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.53  E-value=3.1e-15  Score=102.91  Aligned_cols=59  Identities=29%  Similarity=0.498  Sum_probs=50.7

Q ss_pred             CCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCce---EEEcCCceeeee
Q psy11791          3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKP---FYVPASYVEVYK   64 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~---G~vPsnyv~~~~   64 (143)
                      .+..+++|+|||+++..+  ||+|++||+|.|+++.+++||.++. .|+.   |+||+|||+...
T Consensus         3 ~~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~~~~Ww~g~~-~g~~g~~G~fPsnYV~~~~   64 (108)
T 2rqv_A            3 LGSLYAIVLYDFKAEKAD--ELTTYVGENLFICAHHNCEWFIAKP-IGRLGGPGLVPVGFVSIID   64 (108)
T ss_dssp             CSCCCEEESSCCCCCSSS--BCCCCSSEEECCCCEETTTEEEECC-SSSSCCCEEEESTTCBCCC
T ss_pred             CCCeEEEECCCcCCCCCC--cCCcCCCCEEEEeEecCCCEEEEEE-CCccCCeeEeecceEEEec
Confidence            345679999999977776  9999999999999988899999987 5544   999999998764

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.53  E-value=1e-14  Score=101.82  Aligned_cols=59  Identities=25%  Similarity=0.474  Sum_probs=52.5

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe--CCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~--~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|||||.++..+  +|+|++||+|.|+.+.+++||+++.  ..|+.|+||+|||+.+.
T Consensus         2 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~   62 (120)
T 2kym_A            2 APLFAVTLYEFKAERDD--ELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIID   62 (120)
T ss_dssp             CCCEEEECSCBCCCSTT--CCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEEC
T ss_pred             CCEEEEEcccCCCCCCC--ccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEcc
Confidence            34679999999977776  9999999999999998899999996  57899999999999875

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.52  E-value=1.6e-14  Score=92.13  Aligned_cols=57  Identities=19%  Similarity=0.410  Sum_probs=49.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||.++..+  +|+|++||+|.|++++ ++||+++..  +|+.|+||++||+...
T Consensus        11 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~~~   69 (74)
T 2m0y_A           11 EKYGVAFYNYDARGAD--ELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHLKE   69 (74)
T ss_dssp             CSCEEECSEECCCSSS--BCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEECC
T ss_pred             CeEEEEceeeCCCCcC--cccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEEec
Confidence            4468999999877666  9999999999999985 789999985  6899999999998765

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.9e-14  Score=96.68  Aligned_cols=57  Identities=12%  Similarity=0.261  Sum_probs=49.1

Q ss_pred             ceEEEEeeccCCC--------CCCCCceecCCCCEEEEEec-CCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYS--------TKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~--------~~~~~eLs~~~Gd~l~vl~~-~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|||||+++        ..+  +|+|++||+|.|+.+ ++.+||+++. +|+.|+||++||+.+.
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~--eLsf~~Gd~i~vl~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   82 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEE--ELPFKEGQIIKVYGDKDADGFYRGET-CARLGLIPCNMVSEIQ   82 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTT--BCCBCTTCEEEEEEEECTTCEEEEEE-TTEEEEEETTTSEECC
T ss_pred             ceEEEEccccCCCcccccCCCCCC--ccCCCCCCEEEEEEecCCCCeEEEEE-CCcEEEEehHHeEECC
Confidence            3468999999976        345  999999999999976 4567999998 8999999999999875

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.51  E-value=3.2e-14  Score=94.51  Aligned_cols=58  Identities=29%  Similarity=0.639  Sum_probs=50.7

Q ss_pred             ceEEEEeeccCCCCCCCC-ceecCCCCEEEEEecCCC-----CceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTNK-----DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~-eLs~~~Gd~l~vl~~~~~-----~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||.+  .+.. +|+|++||+|.|+.+.+.     +||+++..+|+.|+||++||+.+.
T Consensus        14 ~~~~~alydy~~--~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~   77 (92)
T 1jqq_A           14 LEFARALYDFVP--ENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (92)
T ss_dssp             CEEEEESSBBCC--SSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECC
T ss_pred             CEEEEECccCCC--CCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECC
Confidence            457899999874  4556 999999999999999776     899999878999999999999875

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.51  E-value=1.9e-14  Score=95.94  Aligned_cols=59  Identities=22%  Similarity=0.409  Sum_probs=50.3

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC----CCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~----~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|||||.+...+  +|+|++||+|.|+.+.+    .+||.++...++.|+||++||+.+.
T Consensus        16 ~~~~~~alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~   78 (93)
T 1wxu_A           16 DHVVARAEYDFVAVSDE--EISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILG   78 (93)
T ss_dssp             CBBCEEESSCBCCSSSS--BCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECC
T ss_pred             CCEEEEECccCCCCCCC--ccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcC
Confidence            44578999999977766  99999999999999876    5999998743349999999999875

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.50  E-value=3.3e-14  Score=94.43  Aligned_cols=59  Identities=17%  Similarity=0.370  Sum_probs=49.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec-------------C--CCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-------------T--NKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~-------------~--~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||.++..+  ||+|++||+|.|+.+             .  +.+||.+++. .|+.|+||+|||+.+.
T Consensus        10 ~~~~~~Alydy~a~~~~--ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~   84 (90)
T 3o5z_A           10 EGFQYRALYPFRRERPE--DLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLG   84 (90)
T ss_dssp             SEEEEEECSCBCCCSTT--BCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEE
T ss_pred             CCcEEEEeeeECCCCCC--ccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEec
Confidence            44578999999977666  999999999999943             1  2389999875 4899999999999875

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.49  E-value=1.4e-15  Score=96.51  Aligned_cols=61  Identities=21%  Similarity=0.430  Sum_probs=52.3

Q ss_pred             CCCCceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceE-EEcCCceeeee
Q psy11791          1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF-YVPASYVEVYK   64 (143)
Q Consensus         1 ~~~~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G-~vPsnyv~~~~   64 (143)
                      |......++|+|||+++..+  +|+|++||+|.|+.+.+++||.++. .|+.| +||++||+.+.
T Consensus         2 ~p~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~gG~~P~~yv~~~~   63 (71)
T 1hsq_A            2 SPTFKCAVKALFDYKAQRED--ELTFIKSAIIQNVEKQEGGWWRGDY-GGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             CCCSSSCCCCSSCCCCSSSS--SCCCCTTCCCBSCCCBTTTEECCBC-SSSCSCCEETTTCCSCS
T ss_pred             CCCCCeEEEECCCCCcCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCeEEeEEChHHcEECC
Confidence            44556678999999977766  9999999999999998889999998 66665 99999998765

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.48  E-value=3e-14  Score=95.80  Aligned_cols=57  Identities=23%  Similarity=0.522  Sum_probs=51.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus        34 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   90 (98)
T 1udl_A           34 VCQVIAMYDYAANNED--ELSFSKGQLINVMNKDDPDWWQGEI-NGVTGLFPSNYVKMTT   90 (98)
T ss_dssp             SEEEEESSCCCCSSTT--SCCCCTTCEEEECBCCSSSEEBCBS-SSCBCCEETTSEEECC
T ss_pred             ceEEEECCCCCCCCCC--ccCCcCCCEEEEEEecCCCEEEEEE-CCcEEEEehHHeEEcC
Confidence            4568999999977666  9999999999999998889999985 8999999999999765

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.46  E-value=9.1e-14  Score=96.89  Aligned_cols=58  Identities=16%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||+++..+  +|+|++||+|.|++++ ++||+++..  +|+.|+||+|||+...
T Consensus        58 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           58 KERHGVAIYNFQGSGAP--QLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             CCEEEEBCSCBCCCSTT--BCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             CceEEEEccccCCCCCC--cccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            34679999999977776  9999999999999986 599999984  5899999999998653

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.46  E-value=1.1e-13  Score=101.60  Aligned_cols=56  Identities=29%  Similarity=0.569  Sum_probs=50.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ...++|+|||++...+  +|+|++||+|.|+++.+++||++++.+|+.|+||+|||+.
T Consensus       118 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          118 IEVVVGTFKFTGERET--DLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             SEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             ccEEEEecCcccCCCC--ccccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence            3478999999977666  9999999999999998899999997789999999999974

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.45  E-value=1.4e-13  Score=98.68  Aligned_cols=57  Identities=26%  Similarity=0.469  Sum_probs=50.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  +|+|++||+|.|+.+. +++||.++. .|+.|+||++||+...
T Consensus         5 ~~~~~Alydy~a~~~~--ELsf~~Gd~i~Vl~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~   62 (142)
T 2kbt_A            5 FGTAKARYDFCARDRS--ELSLKEGDIIKILNKKGQQGWWRGEI-YGRIGWFPSNYVEEDY   62 (142)
T ss_dssp             CCEEEESSCCCCSSSS--BCCCCTTCEEEEEECCCSSSEEEEEE-TTEEEEEETTSEEESS
T ss_pred             CeEEEECCccCCCCCC--cCCCCCCCEEEEEEecCCCCeEEEEE-CCeeEEechHHEEEcc
Confidence            3478999999977666  9999999999999984 789999997 8999999999999874

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.45  E-value=6.7e-14  Score=97.10  Aligned_cols=56  Identities=13%  Similarity=0.349  Sum_probs=48.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEe-----cCCCCceEEEeC---------CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-----KTNKDWWQVIRS---------SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~-----~~~~~WW~~r~~---------~g~~G~vPsnyv~~~   63 (143)
                      ..++|||||+++..+  +|+|++||+|.|+.     ..+++||++++.         +|+.|+||++||+.+
T Consensus        45 ~~~~Alydy~a~~~d--ELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           45 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             eEEEECCccCCCCCC--ccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            468999999977766  99999999999999     678899999863         378999999999865

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.44  E-value=2.5e-13  Score=85.65  Aligned_cols=58  Identities=19%  Similarity=0.477  Sum_probs=45.2

Q ss_pred             EEEEeeccCCCCCC----CCceecCCCCEEEEEec-CCCCceEEE-eCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKD----GKYVRIQEGEKLFLIKK-TNKDWWQVI-RSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~----~~eLs~~~Gd~l~vl~~-~~~~WW~~r-~~~g~~G~vPsnyv~~~~   64 (143)
                      .++|++.|.+....    .++|+|++||+|.|+++ .+.+||+++ ..+|+.|+||+|||++..
T Consensus         6 ~~~~~~~y~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C            6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             EEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cceEEEEEEecCCCCCCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            44566555544433    34999999999999999 578999998 457899999999998653

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=99.43  E-value=9.5e-14  Score=90.69  Aligned_cols=53  Identities=25%  Similarity=0.335  Sum_probs=45.7

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC--CCCceEEEeC---CCceEEEcCCcee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRS---SGKPFYVPASYVE   61 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~--~~~WW~~r~~---~g~~G~vPsnyv~   61 (143)
                      .++|+|||.++..+  ||+|++|+.+.||++.  +++||.+|..   .+++||||+|||.
T Consensus        19 ~~valydF~Ar~~~--ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl~   76 (82)
T 1u3o_A           19 LTVVLQDFSAAHSS--ELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLC   76 (82)
T ss_dssp             EEECSSCBCCCSTT--CCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGSC
T ss_pred             EEEEEeeecCCCCC--eeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEEe
Confidence            47899999987776  9999999999999886  4799999973   3478999999993

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.41  E-value=6.7e-13  Score=85.47  Aligned_cols=56  Identities=20%  Similarity=0.479  Sum_probs=43.8

Q ss_pred             EEEeeccCCCC-CCCCceecCCCCEEEEEecC-CCCceEEEe-CCCceEEEcCCceeee
Q psy11791          8 LKVLYDFDYST-KDGKYVRIQEGEKLFLIKKT-NKDWWQVIR-SSGKPFYVPASYVEVY   63 (143)
Q Consensus         8 ~~alydf~~~~-~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~-~~g~~G~vPsnyv~~~   63 (143)
                      ++++|+|.+.. .+..+|+|++||+|.|+++. +.+||++++ ..|+.|+||+|||+..
T Consensus        18 ~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~   76 (78)
T 1k1z_A           18 FQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   76 (78)
T ss_dssp             CSCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEES
T ss_pred             EEECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            34455554321 12359999999999999995 889999997 5899999999999865

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.40  E-value=2.2e-13  Score=103.72  Aligned_cols=56  Identities=13%  Similarity=0.349  Sum_probs=49.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEe-----cCCCCceEEEeC---------CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-----KTNKDWWQVIRS---------SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~-----~~~~~WW~~r~~---------~g~~G~vPsnyv~~~   63 (143)
                      ..|+|||||.++..+  +|+|++||+|.|+.     ..+.+||+++..         +|+.|+||+|||+.+
T Consensus       143 ~~~rALYdY~a~~~d--ELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          143 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             EEEEESSCBCCCSTT--CCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             eEEEECCCcCCCCCC--cCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            468999999977777  99999999999999     678899999963         589999999999865

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.38  E-value=8.1e-13  Score=102.81  Aligned_cols=58  Identities=22%  Similarity=0.520  Sum_probs=52.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...++|+|||.+...+  +|+|++||++.|+++.+++||.|+. +|+.|+||++||+....
T Consensus         2 ~~~~~a~~~~~~~~~~--el~~~~gd~i~v~~~~~~~w~~~~~-~g~~G~~P~~~v~~~~~   59 (283)
T 3jv3_A            2 SCQVIGMYDYTAQNDD--ELAFSKGQIINVLNKEDPDWWKGEV-SGQVGLFPSNYVKLTTD   59 (283)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSTTEEEEEE-TTEEEEEEGGGEEEGGG
T ss_pred             CeEEEEccccCCCCCC--cCCCCCCCEEEEEecCCCCEEEEEE-CCCCCcCCCccccccCc
Confidence            4679999999877666  9999999999999999899999986 89999999999998653

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.37  E-value=9.5e-13  Score=99.20  Aligned_cols=58  Identities=21%  Similarity=0.520  Sum_probs=52.2

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus       157 ~~~~~~al~~y~~~~~~--eL~~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~  214 (217)
T 1gri_A          157 QPTYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTPVN  214 (217)
T ss_dssp             CCCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEEEC
T ss_pred             CceEEEecCCccCCCCC--cCCCCCCCEEEEEEeCCCCeEEEEE-CCeEEEEeHHHeEECC
Confidence            34579999999977666  9999999999999998889999998 8999999999999875

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.36  E-value=2.8e-13  Score=103.76  Aligned_cols=58  Identities=28%  Similarity=0.621  Sum_probs=52.2

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||++...+  ||+|++||+|.|+++.+++||++++.+|+.|+||+|||+++..
T Consensus       137 ~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~  194 (230)
T 2dvj_A          137 EYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRP  194 (230)
T ss_dssp             CCCBCCSCCCCSSSS--SCCCCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCS
T ss_pred             eeEEEeeeecCCCCC--CccCcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCC
Confidence            458999999977666  9999999999999998899999997799999999999998753

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.35  E-value=1.6e-12  Score=97.12  Aligned_cols=57  Identities=21%  Similarity=0.395  Sum_probs=51.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||.++..+  +|+|.+||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus        81 ~~~~~al~dy~a~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~  137 (193)
T 1ng2_A           81 GEPYVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKSG  137 (193)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEETT
T ss_pred             ceeeeeccccCCCCCC--cccccCCCEEEEEEecCCCeEEEEE-CCCEEEEehHHeEECC
Confidence            3568999999977776  9999999999999998889999997 8999999999999864

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.33  E-value=2.5e-12  Score=102.20  Aligned_cols=59  Identities=27%  Similarity=0.621  Sum_probs=53.1

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||.++..+  +|+|++||+|.|+++.+++||++++.+|+.|+||++||+.+.
T Consensus       133 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~  191 (304)
T 2eyz_A          133 EAEYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYR  191 (304)
T ss_dssp             CCCEEEECSCCCCSCSS--SCCCCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECC
T ss_pred             cceeEEEEeeecCCCCC--cCcccCCCEEEEEEecCCCcEEEEeCCCceeccchhcccccc
Confidence            34579999999977766  999999999999999889999999778999999999999864

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.27  E-value=3.7e-12  Score=94.74  Aligned_cols=57  Identities=16%  Similarity=0.278  Sum_probs=49.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~~~   64 (143)
                      ..+++|+|||.++..+  +|+|++||++.|+++.+ +||+++..  +|+.|+||+|||+...
T Consensus        17 ~~~~~Alydf~~~~~~--eLs~~~Gd~i~v~~~~~-~W~~g~~~~~~g~~G~fP~nyV~~~~   75 (184)
T 3a98_A           17 ERHGVAIYNFQGSGAP--QLSLQIGDVVRIQETCG-DWYRGYLIKHKMLQGIFPKSFIHIKE   75 (184)
T ss_dssp             CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEEET-TEEEEEETTEEEEEEEEEGGGEEEEC
T ss_pred             ceEEEEeeeeCCCCCC--CCCcCCCCEEEEEecCC-CEEEEEEecCCCceEEECcceEEEec
Confidence            4579999999977666  99999999999999876 59999973  5789999999999875

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.26  E-value=8.8e-12  Score=100.42  Aligned_cols=57  Identities=28%  Similarity=0.534  Sum_probs=51.7

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++.+++||+++. +|+.|+||+|||+.+..
T Consensus       175 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~  231 (341)
T 2dyb_A          175 PRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKILKD  231 (341)
T ss_dssp             CEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             cEEEEEEeeCCCCCC--cCCccCCCEEEEEEecCCCEEEEEE-CCcEEEechHHeEEcCC
Confidence            468999999977776  9999999999999998899999996 89999999999998754

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.26  E-value=7.2e-12  Score=99.54  Aligned_cols=57  Identities=28%  Similarity=0.549  Sum_probs=51.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...++|+|||+++..+  +|+|++||+|.|+++.+++||++++.+|+.|+||++||+..
T Consensus       147 ~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~  203 (308)
T 3qwy_A          147 IEVVVGTFKFTGERET--DLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ  203 (308)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred             ceeEEEeceEcCCCCC--cCcCCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccccc
Confidence            3478999999977666  99999999999999988999999987899999999999943

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.26  E-value=2.9e-12  Score=95.67  Aligned_cols=56  Identities=20%  Similarity=0.503  Sum_probs=50.5

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.+...+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus        12 ~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   67 (193)
T 1ng2_A           12 QTYRAIADYEKTSGS--EMALSTGDVVEVVEKSESGWWFCQM-KAKRGWIPASFLEPLD   67 (193)
T ss_dssp             EEEECSSCBCCSSTT--CCCBCTTCEEEEEECCTTSCCEEEE-CCCCCCCCGGGCCCSS
T ss_pred             cEEEEcCCcCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEE-CCeeeEechheEEeec
Confidence            468999999877666  9999999999999998889999995 8999999999999864

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=99.26  E-value=7.7e-12  Score=106.23  Aligned_cols=66  Identities=11%  Similarity=0.067  Sum_probs=55.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceeeeeccCCCCCCcc
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLSNGNRNNV   74 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~~~~~w~~   74 (143)
                      ..++|+|||.++..+  ||+|++||+|.|+++.+++||++++ ..|+.|+||+|||++.......+ ||.
T Consensus       443 ~~~~aly~y~a~~~d--ELs~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~~~~~~p-~y~  509 (526)
T 2de0_X          443 HNQIAIYAHQPRTAD--EIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYP-TYP  509 (526)
T ss_dssp             CEEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECCCEECCC-CCC
T ss_pred             cceEEeecCCCCCCC--cCCcCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEcccCCCCC-Chh
Confidence            458999999977777  9999999999999998899999996 47899999999999875443333 653

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.26  E-value=2.8e-12  Score=86.58  Aligned_cols=57  Identities=23%  Similarity=0.213  Sum_probs=47.7

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ++|+|+|.-...+..+|+|++|+.|.||+..+.+||.+|+..|+.||||.+||....
T Consensus        42 ~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d   98 (102)
T 1ri9_A           42 TKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADND   98 (102)
T ss_dssp             CBCCTTSCSSCCCTTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC--
T ss_pred             EEEeeccccccCCcccCCcCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhcccc
Confidence            567888733344456999999999999999988999999999999999999998653

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=99.24  E-value=1.3e-11  Score=102.57  Aligned_cols=58  Identities=21%  Similarity=0.392  Sum_probs=52.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...++|+|||.+...+  +|+|++||++.|++..+++||.|+. +|+.|+||++||+.+..
T Consensus        30 ~~~~~al~~~~~~~~~--eL~~~~gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   87 (466)
T 2pz1_A           30 VVCAEALWDHVTMDDQ--ELGFKAGDVIEVMDATNREWWWGRV-ADGEGWFPASFVRLRVN   87 (466)
T ss_dssp             CEEEEESSCBCCCCTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECSC
T ss_pred             ccEEEEccccCCCCCC--cCCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEehhHeeeccC
Confidence            4678999999977666  9999999999999998999999997 79999999999998653

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.22  E-value=1.5e-11  Score=76.14  Aligned_cols=42  Identities=38%  Similarity=0.770  Sum_probs=38.9

Q ss_pred             CceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         22 KYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        22 ~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+|+|++||++.|+++.+++||+++. +|+.|+||++||+.+.
T Consensus         4 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   45 (63)
T 1tuc_A            4 REVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLD   45 (63)
T ss_dssp             CCCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECS
T ss_pred             cccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEEcC
Confidence            49999999999999998899999985 8999999999999775

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.22  E-value=4.7e-12  Score=100.56  Aligned_cols=58  Identities=17%  Similarity=0.167  Sum_probs=50.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||...+.+.+||+|++||+|.|+.+.+++||.++. +|+.|+||+|||+.+.
T Consensus       238 ~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~  295 (304)
T 2eyz_A          238 IYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGEC-NGKRGHFPFTHVRLLD  295 (304)
T ss_dssp             CCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEEEEE-TTEEEECCCTTSCCCS
T ss_pred             EEEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEEEEE-CCceEEechHHEEECC
Confidence            468899999844334459999999999999998899999997 8999999999999875

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.80  E-value=2.2e-12  Score=102.42  Aligned_cols=58  Identities=28%  Similarity=0.607  Sum_probs=52.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||+++..+  +|+|++||+|.|+++.+.+||.+++.+|+.|+||++||+.+..
T Consensus       126 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~  183 (303)
T 2lqn_A          126 EYVRTLYDFPGNDAE--DLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVR  183 (303)
Confidence            468999999977666  9999999999999998889999997789999999999998753

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.79  E-value=2.5e-12  Score=102.08  Aligned_cols=58  Identities=14%  Similarity=0.197  Sum_probs=51.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|||||.+++.+..||+|++||+|.|+.+.+++||.++. +|+.|+||+|||+.+.
T Consensus       238 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~  295 (303)
T 2lqn_A          238 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFD  295 (303)
Confidence            468999999877755669999999999999998889999987 8999999999999875

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=99.17  E-value=6.8e-12  Score=99.51  Aligned_cols=59  Identities=19%  Similarity=0.464  Sum_probs=49.3

Q ss_pred             eEEEEeeccCCCCCC---CCceecCCCCEEEEEecCCCCceEEEeCC-----CceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~---~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-----g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||++..++   ..+|+|++||++.|+++.+++||+++..+     |+.|+||+||+.+..
T Consensus         2 ~~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~~   68 (295)
T 1kjw_A            2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR   68 (295)
T ss_dssp             EEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHH
T ss_pred             EEEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHHH
Confidence            578999999865433   34999999999999999889999999853     378999999998753

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.13  E-value=2.2e-11  Score=78.28  Aligned_cols=43  Identities=37%  Similarity=0.740  Sum_probs=39.3

Q ss_pred             CCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         21 GKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        21 ~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+|+|++||+|.|+++.+.+||+++. +|+.|+||++||+.+.
T Consensus         5 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   47 (77)
T 2jmc_A            5 PREVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLD   47 (77)
T ss_dssp             SCCCCCCTTCEEECCCCCCSSCCCEEE-TTEEECCCGGGEEECC
T ss_pred             CCccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEEeeEEEEcC
Confidence            349999999999999998899999986 8999999999999875

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=99.10  E-value=5.9e-11  Score=79.36  Aligned_cols=54  Identities=22%  Similarity=0.322  Sum_probs=45.9

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCC--CCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~--~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .++|+|+. ....  .+|+|.+|+.|.||...+  ++||.+|+..|+.||||.+||+.-
T Consensus        30 ~a~a~~~~-k~g~--~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~vd   85 (96)
T 2gtj_A           30 LAKACCDV-KGGK--NELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEID   85 (96)
T ss_dssp             EEEESSCE-ECTT--SCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEEC
T ss_pred             EEEEeecC-CCCc--ccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEEE
Confidence            57899983 2333  499999999999999975  579999999999999999999853

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.06  E-value=3e-10  Score=69.87  Aligned_cols=41  Identities=34%  Similarity=0.673  Sum_probs=36.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR   47 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~   47 (143)
                      ...++|||||+++..+  +|+|++||+|.|+++.+++||.++.
T Consensus        21 ~~~~~alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~   61 (62)
T 1g2b_A           21 KELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV   61 (62)
T ss_dssp             SCEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             ceEEEEeeeECCCCCC--ccCCCCCCEEEEEEecCCCEEEEEe
Confidence            4578999999977776  9999999999999998899999975

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=99.04  E-value=1.9e-11  Score=102.61  Aligned_cols=57  Identities=25%  Similarity=0.514  Sum_probs=0.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ...++|||||.+...+  +|+|++||+|.|+.+. +++||.++...|+.|+||+|||+.+
T Consensus       428 ~~~~~alydy~~~~~~--eLsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEGQEHD--ELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             ------------------------------------------------------------
T ss_pred             CeEEEEccccCCCCCC--cCccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            3468999999877766  9999999999999887 4589999985599999999999864

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=99.03  E-value=1.9e-10  Score=92.67  Aligned_cols=58  Identities=14%  Similarity=0.269  Sum_probs=48.2

Q ss_pred             CceEEEEeeccCCCCCCC-----CceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCcee
Q psy11791          4 QDVTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVE   61 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~-----~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~   61 (143)
                      ...+++|+|||++..++.     .+|+|++||+|.|+++.+++||+++..  +|..|+||+++..
T Consensus        37 ~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~~~  101 (337)
T 4dey_A           37 VAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKL  101 (337)
T ss_dssp             CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHH
T ss_pred             ccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHHHH
Confidence            346899999999766541     259999999999999999999999984  4689999998843

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.03  E-value=2.3e-11  Score=96.58  Aligned_cols=58  Identities=19%  Similarity=0.321  Sum_probs=0.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|+|||.+.+.+.+||+|++||+|.|+.+.+++||.++. +|+.|+||+|||+.+.
T Consensus       248 ~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~g~~-~g~~G~fP~~yv~~~~  305 (308)
T 3qwy_A          248 AKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAEL-DGQIGSVPHTYLRFTA  305 (308)
T ss_dssp             -----------------------------------------------------------
T ss_pred             cccccccccccccCCcccceeCCCCEEEEEEEcCCCcEEEEE-CCeeEEechHHeEEec
Confidence            357999999665664459999999999999998889998887 8999999999999765

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.90  E-value=7.9e-10  Score=96.03  Aligned_cols=64  Identities=16%  Similarity=0.249  Sum_probs=51.4

Q ss_pred             CceEEEEeeccCCC-CCCCCceecCCCCEEEEEec-----CCCCceEEEe-CCCceEEEcCCceeeeeccC
Q psy11791          4 QDVTLKVLYDFDYS-TKDGKYVRIQEGEKLFLIKK-----TNKDWWQVIR-SSGKPFYVPASYVEVYKKLS   67 (143)
Q Consensus         4 ~~~~~~alydf~~~-~~~~~eLs~~~Gd~l~vl~~-----~~~~WW~~r~-~~g~~G~vPsnyv~~~~~~~   67 (143)
                      +..+++|+|||... ..++.+|+|++||+|.|+.+     .+++||.|++ .+|+.|+||++||..++.+.
T Consensus       572 rs~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl~  642 (655)
T 3pvl_A          572 RSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTVT  642 (655)
T ss_dssp             HCCEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCSS
T ss_pred             cchhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCCC
Confidence            45689999999743 45566999999999999888     4679999996 47999999999999887543

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=98.89  E-value=2.5e-09  Score=84.31  Aligned_cols=55  Identities=24%  Similarity=0.390  Sum_probs=46.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||..   .  ++++.+|+.+++++.++.+||+++..+|.+|+||++|+...+
T Consensus       198 ~~~v~al~dy~~---~--e~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~ip~  252 (283)
T 3pe0_A          198 RLPLLAVCDYKQ---V--EVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLVPP  252 (283)
T ss_dssp             CEEEEECSCEEC---S--SCEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEECCS
T ss_pred             CceEEeecCccC---C--cccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEeeCC
Confidence            467999999863   2  799999999999999888999999999999999999998764

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=98.86  E-value=1.5e-09  Score=89.14  Aligned_cols=58  Identities=10%  Similarity=0.233  Sum_probs=48.6

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec---CCCCceEEEeCCC-----ceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSG-----KPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~---~~~~WW~~r~~~g-----~~G~vPsnyv~~~   63 (143)
                      ...+++|+|||++...  .+|+|++||++.|++.   .+.+||+++...+     ..|+||++|+.+.
T Consensus       105 ~~~~vral~dy~~~~~--~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~  170 (391)
T 3tsz_A          105 DSFYIRTHFEYEKESP--YGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ  170 (391)
T ss_dssp             CCEEEEECSCBCCSST--TBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHH
T ss_pred             cccccccccccCCCCC--CcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHH
Confidence            4568899999987544  4999999999999998   5778999997543     4899999999875

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=98.84  E-value=2.4e-09  Score=93.72  Aligned_cols=61  Identities=20%  Similarity=0.491  Sum_probs=49.8

Q ss_pred             CceEEEEeeccCCCCCCC---CceecCCCCEEEEEecCCCCceEEEeCC-----CceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDG---KYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~---~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-----g~~G~vPsnyv~~~~   64 (143)
                      ...+++|+|||++..++.   ..|+|++||+|.|++..+.+||.++...     +..|+||++|+.+..
T Consensus       426 ~~~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~  494 (721)
T 2xkx_A          426 RGFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR  494 (721)
T ss_pred             cceeEEEeeccCcCCCCCCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHHH
Confidence            456789999999876661   2299999999999999889999999752     356999999997643

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=98.82  E-value=2.5e-09  Score=85.32  Aligned_cols=58  Identities=9%  Similarity=0.245  Sum_probs=45.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCC---------ceEEEeCC-----CceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---------WWQVIRSS-----GKPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~---------WW~~r~~~-----g~~G~vPsnyv~~~   63 (143)
                      +..+++|+|||++....  +|+|++||++.|++..+++         ||.+++..     +..|+||++|+.+.
T Consensus         3 dsfyVRalfdy~~~~~~--eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq   74 (308)
T 3kfv_A            3 DSFYIRTHFELEPSPPS--GLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQ   74 (308)
T ss_dssp             CCEEEEECSCBCCCSSS--BCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHH
T ss_pred             ccEEEEEecCcCCCCcc--cCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHH
Confidence            35688999999876655  9999999999999987665         99998743     26799999999763

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=98.76  E-value=6.3e-09  Score=87.23  Aligned_cols=58  Identities=10%  Similarity=0.229  Sum_probs=48.6

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEec---CCCCceEEEeCCC-----ceEEEcCCceeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSG-----KPFYVPASYVEVY   63 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~---~~~~WW~~r~~~g-----~~G~vPsnyv~~~   63 (143)
                      ...+++|+|||++....  +|+|++||++.|++.   .+.+||+++...+     ..|+||++|+.+.
T Consensus        97 ~s~yVralfdy~~~~~~--~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e~  162 (468)
T 3shw_A           97 DSFYIRTHFEYEKESPY--GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ  162 (468)
T ss_dssp             CCEEEEECSCBCCSSTT--BCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHHH
T ss_pred             cccccccccCcCCCCCC--CceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHHH
Confidence            45688999999876655  999999999999998   5678999997432     5899999999864

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.73  E-value=4.9e-08  Score=64.49  Aligned_cols=48  Identities=21%  Similarity=0.322  Sum_probs=39.1

Q ss_pred             CCCCceecCCCCEEEEEecCCC----CceEEEeCCCceEEEcCCceeeeeccC
Q psy11791         19 KDGKYVRIQEGEKLFLIKKTNK----DWWQVIRSSGKPFYVPASYVEVYKKLS   67 (143)
Q Consensus        19 ~~~~eLs~~~Gd~l~vl~~~~~----~WW~~r~~~g~~G~vPsnyv~~~~~~~   67 (143)
                      ....||++++||++.||.+.|+    .||.++. +|..||||++|++.+....
T Consensus        29 tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdt-gg~~GyvPs~yLe~~~~~~   80 (92)
T 1ug1_A           29 AQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN-GVTKGFVYSSFLKPYNPRR   80 (92)
T ss_dssp             CSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC-SSSEEEEEGGGEEECCCCS
T ss_pred             CCceeeeecCCCEEEEEecCCCCCCCcceEEEC-CCcEEeeEhhhceEcccCC
Confidence            3445999999999999999744    5666777 8999999999999886433

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=98.70  E-value=1.4e-08  Score=80.41  Aligned_cols=60  Identities=20%  Similarity=0.435  Sum_probs=41.9

Q ss_pred             CCceEEEEeeccCCCCCC---CCceecCCCCEEEEEecCCCCceEEEeCC-----CceEEEcCCceee
Q psy11791          3 LQDVTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEV   62 (143)
Q Consensus         3 ~~~~~~~alydf~~~~~~---~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~-----g~~G~vPsnyv~~   62 (143)
                      ++..+++|+|||++..++   ...|+|++||+|.|++..+.+||.++...     +..|+||+....+
T Consensus         3 ~~s~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~~~e   70 (292)
T 3tvt_A            3 KRSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWE   70 (292)
T ss_dssp             --CCEEEECSCBCC---------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHHHHH
T ss_pred             CceEEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChHHHH
Confidence            456789999999876543   23699999999999999999999999742     2479999965543

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.63  E-value=3.7e-08  Score=73.96  Aligned_cols=55  Identities=25%  Similarity=0.631  Sum_probs=47.6

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCC---ceEEEeCCCceEEEcCCceeeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---WWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~---WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+.++|+|......  +|.+++|+.+.++.+.+.+   ||.++. .|+.|+||.+||+..+
T Consensus       172 ~~~al~d~~~~~~~--eLa~~~G~~i~vl~~~~~~~~~Ww~~~~-~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          172 VIYALWDYEPQNDD--ELPMKEGDCMTIIHREDEDEIEWWWARL-NDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             EEEESSCBCCSSTT--BCCBCSSCEEEECCCCTTSCSSEEEEEE-TTEEEEEEGGGEECCC
T ss_pred             eEEEEeccCCCCCC--cccccCCCEEEEEEecCCCCCCEEEEEE-CCcEEEeehHHeeECC
Confidence            46799998866666  9999999999999887655   999986 8999999999998764

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=98.46  E-value=1.9e-07  Score=77.88  Aligned_cols=56  Identities=20%  Similarity=0.421  Sum_probs=49.9

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +...|+|||||.   ..  ++++.+||.+++++.++.+||+|+..+|.+|+||+.|+...+
T Consensus       282 ~~~~V~alcdy~---~~--e~~i~kge~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ipp  337 (450)
T 3r6n_A          282 KPIILRALCDYK---QD--QKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPP  337 (450)
T ss_dssp             SCCEEEESSCEE---ET--TEEECTTCEEEEEECSSSSEEEEECSSSCCEEEEGGGEECCS
T ss_pred             CCceEEEecccc---CC--eeeEecCCEEEEecCCCCCceEEecCCCCeeccceeEEecCC
Confidence            456799999987   23  899999999999999999999999988999999999998654

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.37  E-value=3.7e-08  Score=68.22  Aligned_cols=77  Identities=14%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             EcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceEEEec------eeccc-CCCcee----ccCcc----cc
Q psy11791         55 VPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFVSVKD------RAISI-DNNSSI----KQKPK----VA  119 (143)
Q Consensus        55 vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~------~~~~~-~~~~~v----k~~~~----l~  119 (143)
                      +|+|||++...+... .||.+.|+|.+||++|+..|+..|.||-=.+      -++.+ .++...    ..+..    +.
T Consensus         2 ~psnyv~~~~~l~~~-~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~   80 (121)
T 2dly_A            2 SSGSSGAEDRSLQAE-PWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLT   80 (121)
T ss_dssp             CSCCCCCSSGGGGGC-SSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEE
T ss_pred             CCccccccccccCcC-CccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEEC
Confidence            599999976444333 5999999999999999988777799991100      01111 111111    12111    66


Q ss_pred             cccCCCCCCCCcc
Q psy11791        120 KRTIFPVIPSYEN  132 (143)
Q Consensus       120 e~~~f~~ip~li~  132 (143)
                      +...|+||++||.
T Consensus        81 ~~~~F~sl~eLV~   93 (121)
T 2dly_A           81 RRKVFSTLNEFVN   93 (121)
T ss_dssp             TTEEESSHHHHHH
T ss_pred             CCCccCCHHHHHH
Confidence            7889999998875

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=98.27  E-value=9.9e-07  Score=64.92  Aligned_cols=55  Identities=25%  Similarity=0.651  Sum_probs=49.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|+|+++..+  +|+|++|+++.+++..+.+||.+.. .|+.|++|.+|+...
T Consensus        15 ~~~~al~d~~~~~~~--el~~~~Gd~~~v~~~~~~~w~~~~~-~g~~gl~p~~~v~~~   69 (222)
T 3ehr_A           15 KVFRALYTFEPRTPD--ELYIEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAEQ   69 (222)
T ss_dssp             EEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEE-TTEEEEEEHHHHHHH
T ss_pred             eEEEEeCCcCCCCCC--cccccCCCEEEEeccccchhHhccc-CCcceeechhhcccc
Confidence            467999999977777  9999999999999998899999987 899999999998754

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=98.13  E-value=5.1e-10  Score=89.12  Aligned_cols=86  Identities=15%  Similarity=0.110  Sum_probs=48.7

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEE---EecCCCC-------------ceEEEe-CCCceEEEcC--Cceeeee----
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFL---IKKTNKD-------------WWQVIR-SSGKPFYVPA--SYVEVYK----   64 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~v---l~~~~~~-------------WW~~r~-~~g~~G~vPs--nyv~~~~----   64 (143)
                      ++|||+|.....+  +|+|++||.+.|   +...+++             ||.++. ..|..+.+|.  +|+....    
T Consensus       106 l~aL~~~~~~~~~--eLsf~kgd~~~ier~ln~~~pdw~~l~k~rd~~~~wl~~~gl~~~~~~~~~~~~~~~~~~~~l~~  183 (302)
T 2y3a_B          106 IAEIHESRTKLEQ--DLRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQRKINEWLGIKNETEDQYSLME  183 (302)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCSCC----------------------------
T ss_pred             HHHHHhhhhcchh--hhhhhhhHHHhHHhhhccCChHHHHHhhcccchhHHHHhcCCCcccccccccccCCCCCcccccc
Confidence            5689998866666  999999999988   4433444             555543 2344444442  4443211    


Q ss_pred             -----ccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         65 -----KLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        65 -----~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                           .......||.+.|+|..|+++|.  ++..|+||
T Consensus       184 ~~~~~~~l~~~~WyhG~IsR~eAE~lL~--~~~~GtFL  219 (302)
T 2y3a_B          184 DEDALPHHEERTWYVGKINRTQAEEMLS--GKRDGTFL  219 (302)
T ss_dssp             ----CGGGSSTTTBCCSCCHHHHHHHHT--TSCTTBEE
T ss_pred             cccccccccCCCccCCCCCHHHHHHHhc--CCCCCcEE
Confidence                 11122369999999999999994  55669999

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=97.94  E-value=2.4e-07  Score=77.27  Aligned_cols=57  Identities=11%  Similarity=0.083  Sum_probs=40.6

Q ss_pred             cCCCCceEEEeCC-CceEEEcCCceeeeeccCCCC----CCcccCCCccccccccCcCCCCCCceE
Q psy11791         37 KTNKDWWQVIRSS-GKPFYVPASYVEVYKKLSNGN----RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        37 ~~~~~WW~~r~~~-g~~G~vPsnyv~~~~~~~~~~----~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      ..+++||+++... |++|+||++||.... ....+    +||.+.|+|.+||++|..  .+ |+||
T Consensus        14 ~~~~~ww~~~~~~~~~~g~~P~~~v~~~~-~~~~~wy~~~w~hg~i~r~~ae~lL~~--~~-G~FL   75 (463)
T 3cxl_A           14 LYFQGVWKSYLYQLQQEAPHPRRITCTCE-VENRPKYYGREFHGMISREAADQLLIV--AE-GSYL   75 (463)
T ss_dssp             ----CCSCCHHHHHHHHSCCCEECCCCCC-CTTCCTTCCTTBCCSCCHHHHHHHHTT--ST-TEEE
T ss_pred             CCCCCEEEEEecCcCccCCCCcCccCCcc-ccCCCCccccccccCCCHHHHHHHHcC--CC-CeEE
Confidence            4467899999754 489999999998653 22222    455999999999998863  33 8888

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.94  E-value=4.8e-07  Score=61.60  Aligned_cols=42  Identities=19%  Similarity=0.220  Sum_probs=34.6

Q ss_pred             CCceEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         49 SGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        49 ~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .|++||||+||+....     ..||.+.|+|.+||++|.  ++..|.||
T Consensus         3 ~g~~G~ip~n~v~~~~-----~~Wyhg~isR~~Ae~lL~--~~~~G~FL   44 (111)
T 2eo3_A            3 SGSSGMSSARFDSSDR-----SAWYMGPVSRQEAQTRLQ--GQRHGMFL   44 (111)
T ss_dssp             CCCCCSCSCCCCTTCH-----HHHEEESCCHHHHHHHHS--SCCTTCEE
T ss_pred             CCccccccccccccCC-----CCcccCCCCHHHHHHHhc--CCCCceEE
Confidence            6789999999986422     359999999999999995  45569999

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=97.92  E-value=8e-07  Score=62.90  Aligned_cols=75  Identities=20%  Similarity=0.332  Sum_probs=46.6

Q ss_pred             CCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCcee
Q psy11791         39 NKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSI  112 (143)
Q Consensus        39 ~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~v  112 (143)
                      +.+||++        | |.++.        ...||.+.|+|.+||++|+.  ...|.||   |-..   -+|.+--++.|
T Consensus        12 ~~~Ww~~--------~-p~~~~--------~~~WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~~~~v   72 (138)
T 2crh_A           12 EQNWWEG--------P-PQDLS--------VHLWYAGPMERAGAESILAN--RSDGTFLVRQRVKDAAEFAISIKYNVEV   72 (138)
T ss_dssp             CCCCSCC--------C-SSCGG--------GSSSBCCSCCHHHHHHHTTT--SCTTEEEEECCSSTTCCCEEEEEETTEE
T ss_pred             CCCEeee--------c-CCCCC--------cCCcccCCCCHHHHHHHhcC--CCCCEEEEEECCCCCCCEEEEEEECCeE
Confidence            5689998        4 77762        23599999999999999975  3458998   1000   01111001112


Q ss_pred             c------cCcc--cccccCCCCCCCCcc
Q psy11791        113 K------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus       113 k------~~~~--l~e~~~f~~ip~li~  132 (143)
                      +      ..-.  +.+...|+||++||.
T Consensus        73 ~H~~I~~~~g~~~l~~~~~F~sl~eLV~  100 (138)
T 2crh_A           73 KHIKIMTAEGLYRITEKKAFRGLTELVE  100 (138)
T ss_dssp             EEEECEEETTEEESSTTCCBSSHHHHHH
T ss_pred             EEEEEEeCCCEEEECCCCccCCHHHHHH
Confidence            1      1111  667789999999885

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=97.83  E-value=1.8e-06  Score=58.75  Aligned_cols=70  Identities=20%  Similarity=0.268  Sum_probs=45.3

Q ss_pred             ceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cC--cc-
Q psy11791         59 YVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QK--PK-  117 (143)
Q Consensus        59 yv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~--~~-  117 (143)
                      ||.+...+.. ..||.+.|+|.+||++|+..|+..|.||             ||....   .+++.++     .+  -. 
T Consensus         2 yva~~~~l~~-~~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~---~~~~~v~H~~I~~~~~g~~   77 (114)
T 1blj_A            2 SVAPVETLEV-EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDIT---TQGEVVKHYKIRSLDNGGY   77 (114)
T ss_dssp             CCCSSCCSCC-SSSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCC---TTTCBCCCEEEEEETTTEE
T ss_pred             ccCccCcccc-CCccCCCCCHHHHHHHHhhCCCCCceEEEEeCCCCCCCEEEEEEEec---CCCCcEEEEEEEEcCCCCE
Confidence            4444333332 3599999999999999998887779999             333210   0122221     21  11 


Q ss_pred             -cccccCCCCCCCCcc
Q psy11791        118 -VAKRTIFPVIPSYEN  132 (143)
Q Consensus       118 -l~e~~~f~~ip~li~  132 (143)
                       +.+...|+||++||+
T Consensus        78 ~l~~~~~F~sl~~LV~   93 (114)
T 1blj_A           78 YISPRITFPTLQALVQ   93 (114)
T ss_dssp             EEETTEEESSHHHHHH
T ss_pred             EECCCcccCCHHHHHH
Confidence             667889999999885

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.52  E-value=1.3e-06  Score=61.07  Aligned_cols=72  Identities=17%  Similarity=0.243  Sum_probs=43.2

Q ss_pred             CCCCceEEEeCCCceEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCC-CCceE------------EEeceec
Q psy11791         38 TNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGND-KGGFV------------SVKDRAI  104 (143)
Q Consensus        38 ~~~~WW~~r~~~g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~-~G~F~------------sv~~~~~  104 (143)
                      ++++||++       ++||+|||.....+... .||.          +|++.|+. .|+||            ||...  
T Consensus         6 ~~~~~~~~-------~~iPsnyv~~~~~l~~~-~Wyh----------~Ll~~g~~~dG~FLVR~S~~~g~y~LSv~~~--   65 (126)
T 2cr4_A            6 SGEDYEKV-------PLPNSVFVNTTESCEVE-RLFK----------ATSPRGEPQDGLYCIRNSSTKSGKVLVVWDE--   65 (126)
T ss_dssp             CCCCCCSC-------SSCTTTBCSCCCHHHHH-HHHH----------HHSTTSCCCTTCEEEEECSSTTCEEEEEEET--
T ss_pred             CCCCeEEc-------CCCCHhhcCcccccccC-CCHH----------HHhhCCCCCCCeEEEEecCCCCCEEEEEEeC--
Confidence            46689977       46999999865433222 5887          34444544 27777            33221  


Q ss_pred             ccCCCceec-----cCc-c--cccccCCCCCCCCcc
Q psy11791        105 SIDNNSSIK-----QKP-K--VAKRTIFPVIPSYEN  132 (143)
Q Consensus       105 ~~~~~~~vk-----~~~-~--l~e~~~f~~ip~li~  132 (143)
                         .++.|+     ... .  +.++..|+||++||+
T Consensus        66 ---~~~~vkH~rI~~~~~~~~i~~~~~F~sL~eLV~   98 (126)
T 2cr4_A           66 ---TSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVE   98 (126)
T ss_dssp             ---TTTEECCEECEEETTEEESSSSCEESSHHHHHH
T ss_pred             ---CCCCEEEEEEEECCCeEEEcCCccCCCHHHHHH
Confidence               112232     111 2  678889999999875

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=97.48  E-value=1.4e-05  Score=53.37  Aligned_cols=60  Identities=20%  Similarity=0.319  Sum_probs=41.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCc--c--cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKP--K--VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~--~--l~e~~~f~~ip  128 (143)
                      .||.+.|+|.+||++|++.|+..|+||             ||....-  .+++.++     .+.  .  +.+...|+||+
T Consensus         5 ~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~~~LSv~~~~~--~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~   82 (105)
T 1lkk_A            5 PWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQ--NQGEVVKHYKIRNLDNGGFYISPRITFPGLH   82 (105)
T ss_dssp             TTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEET--TTEEEEEEEEEEECTTSCEESSTTSCBSSHH
T ss_pred             ceecCCCCHHHHHHHHHhcCCCCceEEEEECCCCCCcEEEEEEEccc--CCCCcEEEEEEEECCCCCEEECCCceeCCHH
Confidence            599999999999999998887779999             3432100  0112222     211  2  66778999999


Q ss_pred             CCcc
Q psy11791        129 SYEN  132 (143)
Q Consensus       129 ~li~  132 (143)
                      +||+
T Consensus        83 ~LI~   86 (105)
T 1lkk_A           83 ELVR   86 (105)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9885

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.43  E-value=1.1e-06  Score=70.46  Aligned_cols=56  Identities=11%  Similarity=0.102  Sum_probs=41.4

Q ss_pred             EEeeccCCCC--CCCCceec--CCCCEEEEEecCCCCceEEEe--CCCceEEEcCC-ceeeee
Q psy11791          9 KVLYDFDYST--KDGKYVRI--QEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPAS-YVEVYK   64 (143)
Q Consensus         9 ~alydf~~~~--~~~~eLs~--~~Gd~l~vl~~~~~~WW~~r~--~~g~~G~vPsn-yv~~~~   64 (143)
                      +|+|+|.+..  .+..+|+|  .+||+|.|+++.+.+||.++.  ..|+.|+||.+ ||+...
T Consensus       270 ~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~~~v~~~~  332 (341)
T 2dyb_A          270 KDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQKD  332 (341)
T ss_dssp             HHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSCEEEEECC
T ss_pred             hhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecceeEEEecC
Confidence            4677776432  44346666  799999999998889999975  34667799998 776543

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=97.43  E-value=2.7e-05  Score=53.47  Aligned_cols=59  Identities=7%  Similarity=0.103  Sum_probs=39.5

Q ss_pred             CCCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCc-c--cccccCC--CC
Q psy11791         70 NRNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKP-K--VAKRTIF--PV  126 (143)
Q Consensus        70 ~~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~-~--l~e~~~f--~~  126 (143)
                      ..||.++|+|.+||++|+..+. .|.||             ||....   +.++.|+     ... .  +.+...|  +|
T Consensus        21 ~~WyhG~isR~eAe~lL~~~~~-~G~FLVR~S~~~~g~y~LSv~~~~---~~~~~v~H~~I~~~~g~~~i~~~~~F~~~s   96 (118)
T 2el8_A           21 TPSCFLKVSRLEAQLLLERYPE-CGNLLLRPSGDGADGVSVTTRQMH---NGTHVVRHYKVKREGPKYVIDVEQPFSCTS   96 (118)
T ss_dssp             SCTTCCCCCHHHHHHHHHHSST-TCSBEEEECCSSSSSEEEEECCCB---TTBCCCEEECBCCBTTBCCBSSSSCCCCSS
T ss_pred             CCceecCCCHHHHHHHHhhCCC-CcEEEEeeCCCCCCceEEEEEEec---CCCCcEEEEEEEEcCCEEEEeCCCeECCCC
Confidence            3699999999999999987774 49999             222210   0122232     111 1  6677889  99


Q ss_pred             CCCCcc
Q psy11791        127 IPSYEN  132 (143)
Q Consensus       127 ip~li~  132 (143)
                      |++||+
T Consensus        97 L~eLV~  102 (118)
T 2el8_A           97 LDAVVN  102 (118)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999885

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=97.41  E-value=1.7e-05  Score=53.60  Aligned_cols=60  Identities=23%  Similarity=0.392  Sum_probs=40.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE------------EEeceecccCCCceec-----cCc--c--cccccCCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV------------SVKDRAISIDNNSSIK-----QKP--K--VAKRTIFPVIPS  129 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~------------sv~~~~~~~~~~~~vk-----~~~--~--l~e~~~f~~ip~  129 (143)
                      .||.+.|+|.+||++|+..|.+ |+||            ||..+... +..+.++     .+.  .  +.+...|+||++
T Consensus        12 ~Wyhg~isR~~Ae~lL~~~~~~-G~FLVR~S~~~g~y~LSv~~~~~~-~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~   89 (110)
T 2ekx_A           12 DWFAGNISRSQSEQLLRQKGKE-GAFMVRNSSQVGMYTVSLFSKAVN-DKKGTVKHYHVHTNAENKLYLAENYCFDSIPK   89 (110)
T ss_dssp             SSBCCSCCHHHHHHHHHHTCCT-TEEEEEECSSTTCEEEEECCCCSS-CSSCCCEEEECEECTTCCEESSTTCCCSCHHH
T ss_pred             CeecCCCCHHHHHHHHhccCCC-ceEEEEecCCCCCEEEEEEecccc-CCCCcEEEEEEEECCCCCEEECCCCccCCHHH
Confidence            6999999999999999887755 9999            33221000 0122232     222  1  677889999999


Q ss_pred             Ccc
Q psy11791        130 YEN  132 (143)
Q Consensus       130 li~  132 (143)
                      ||+
T Consensus        90 LV~   92 (110)
T 2ekx_A           90 LIH   92 (110)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.37  E-value=2.4e-05  Score=53.73  Aligned_cols=73  Identities=10%  Similarity=0.043  Sum_probs=45.6

Q ss_pred             cCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE---EE-----eceecccCCCceec----cCcc----cc
Q psy11791         56 PASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV---SV-----KDRAISIDNNSSIK----QKPK----VA  119 (143)
Q Consensus        56 Psnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv-----~~~~~~~~~~~~vk----~~~~----l~  119 (143)
                      |.+||++...+... .||.+.|+|.+||++|.  +...|.||   |-     +.-++. .++...+    .+..    +.
T Consensus         3 ~~~~vap~~~l~~~-~WyhG~isR~~Ae~lL~--~~~~G~FLVR~S~~~~g~y~LSv~-~~~~v~H~~I~~~~~g~~~l~   78 (119)
T 2ecd_A            3 SGSSGTPVNSLEKH-SWYHGPVSRSAAEYLLS--SLINGSFLVRESESSPGQLSISLR-YEGRVYHYRINTTADGKVYVT   78 (119)
T ss_dssp             CCCCCCSSCCCCCS-SSEEEECCHHHHHHHHH--TSCTTBEEEEEESSSTTEEEEEEE-CSSCEEEECCCCCSSSCCCCC
T ss_pred             CCcccccccccccC-ccccCCCCHHHHHHHhc--CCCCCeEEEEeCCCCCCCEEEEEE-ECCeEEEEEEEEcCCCCEEEc
Confidence            56788776655433 59999999999999885  33459999   21     111111 1111111    1111    56


Q ss_pred             cccCCCCCCCCcc
Q psy11791        120 KRTIFPVIPSYEN  132 (143)
Q Consensus       120 e~~~f~~ip~li~  132 (143)
                      +...|+||++||+
T Consensus        79 ~~~~F~sl~~LV~   91 (119)
T 2ecd_A           79 AESRFSTLAELVH   91 (119)
T ss_dssp             SSCCCSSHHHHHH
T ss_pred             CCCcCCCHHHHHH
Confidence            7889999999874

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=97.29  E-value=1.8e-05  Score=54.81  Aligned_cols=60  Identities=23%  Similarity=0.449  Sum_probs=40.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE------------EEeceecccCCCceec-----cC--cc--cccccCCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV------------SVKDRAISIDNNSSIK-----QK--PK--VAKRTIFPVIPS  129 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~------------sv~~~~~~~~~~~~vk-----~~--~~--l~e~~~f~~ip~  129 (143)
                      .||.++|+|.+||++|...|.+ |.||            ||..+..+ +.++.|+     .+  -.  +.+...|+||++
T Consensus        12 ~WyhG~isR~eAe~lL~~~g~~-G~FLVR~Ss~~g~y~LSv~~~~~~-~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~e   89 (125)
T 2ge9_A           12 EWYSKHMTRSQAEQLLKQEGKE-GGFIVRDSSKAGKYTVSVFAKSTG-DPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPE   89 (125)
T ss_dssp             SSEETTCCHHHHHHHHHHHTCT-TEEEEEECSSSCCEEEEEEESSSS-STTCEEEEEECEEETTTEEESSTTSCBSSHHH
T ss_pred             CccccCCCHHHHHHHHhhcCCC-ceEEEEecCCCCCEEEEEEecccc-CCCCeEEEEEEEEcCCCCEEECCCCcCCCHHH
Confidence            6999999999999999887755 9998            33321100 0123332     21  11  677889999999


Q ss_pred             Ccc
Q psy11791        130 YEN  132 (143)
Q Consensus       130 li~  132 (143)
                      ||.
T Consensus        90 LV~   92 (125)
T 2ge9_A           90 LIN   92 (125)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=97.27  E-value=1.9e-05  Score=53.84  Aligned_cols=74  Identities=14%  Similarity=0.027  Sum_probs=44.6

Q ss_pred             CceEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE---EEe--ceecccCCCceec-----cCc-c-
Q psy11791         50 GKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV---SVK--DRAISIDNNSSIK-----QKP-K-  117 (143)
Q Consensus        50 g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~--~~~~~~~~~~~vk-----~~~-~-  117 (143)
                      |++|+||...-..     ....||.+.|+|.+||++|..    .|.||   |-.  .-++++-.++.++     ... . 
T Consensus         1 ~~~g~vp~~~~~l-----~~~~WyhG~isR~eAe~lL~~----~G~FLVR~S~~~~~y~LSv~~~~~v~H~~I~~~~g~~   71 (114)
T 1wqu_A            1 GSSGSSGEVQKPL-----HEQLWYHGAIPRAEVAELLVH----SGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLY   71 (114)
T ss_dssp             CCCCCCCGGGSCG-----GGCTTEEESCCHHHHHTTCCS----TTEEEEEECSSSCCEEEEEEETTEEEEEECEECSSSE
T ss_pred             CCccccCCccccc-----ccCCcEeeCCCHHHHHHHhcc----CCeEEEEEcCCCCCEEEEEEECCEEEEEEEEecCCEE
Confidence            5778888854322     113599999999999999973    48898   100  1111111111221     111 1 


Q ss_pred             cccccCCCCCCCCcc
Q psy11791        118 VAKRTIFPVIPSYEN  132 (143)
Q Consensus       118 l~e~~~f~~ip~li~  132 (143)
                      ..+...|+||++||+
T Consensus        72 ~~~~~~F~sl~~LV~   86 (114)
T 1wqu_A           72 RLEGEGFPSIPLLID   86 (114)
T ss_dssp             ESSSCCBSSHHHHHH
T ss_pred             EECCCCCCCHHHHHH
Confidence            456789999999885

>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.23  E-value=4.5e-05  Score=52.65  Aligned_cols=61  Identities=23%  Similarity=0.312  Sum_probs=40.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---E----EeceecccC----CCceec-----cCc--c--cccccCCCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---S----VKDRAISID----NNSSIK-----QKP--K--VAKRTIFPVIPSY  130 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---s----v~~~~~~~~----~~~~vk-----~~~--~--l~e~~~f~~ip~l  130 (143)
                      .||.+.|+|.+||++|+..+.+ |.||   |    .+.-++...    ..+.++     .+.  .  +.+...|+||++|
T Consensus        17 ~WyhG~isR~eAe~lL~~~~~~-G~FLVR~S~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eL   95 (125)
T 2dm0_A           17 EWYHRNITRNQAEHLLRQESKE-GAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPEL   95 (125)
T ss_dssp             SSBCCSCCHHHHHHHHHHHCST-TCBCEEEETTEEEEEEEEECCCSSSSSCCEEEEEEEECTTCCEESSSSCCCSSHHHH
T ss_pred             CcccCCCCHHHHHHHHhhcCCC-CEEEEEecCCCCCEEEEEEeccccCCCCcEEEEEEEEcCCCCEEECCCCccCCHHHH
Confidence            6999999999999999877755 9999   2    111111111    122332     221  1  6778899999998


Q ss_pred             cc
Q psy11791        131 EN  132 (143)
Q Consensus       131 i~  132 (143)
                      |+
T Consensus        96 V~   97 (125)
T 2dm0_A           96 IW   97 (125)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=97.22  E-value=2.5e-05  Score=54.57  Aligned_cols=62  Identities=11%  Similarity=0.055  Sum_probs=38.9

Q ss_pred             CCCcccCCCccccccccCcCCCCCCceE---E----Eeceeccc-CCCceec-----cC-cc--cc--cccCCCCCCCCc
Q psy11791         70 NRNNVENINPTMEKTRSYSEGNDKGGFV---S----VKDRAISI-DNNSSIK-----QK-PK--VA--KRTIFPVIPSYE  131 (143)
Q Consensus        70 ~~w~~~~i~r~~~e~ll~~~g~~~G~F~---s----v~~~~~~~-~~~~~vk-----~~-~~--l~--e~~~f~~ip~li  131 (143)
                      ..||+++|+|.+||++|. .++..|+||   |    -++-+++- ..+..||     .. -.  +.  ++..|+||++||
T Consensus        15 epWff~~isR~eAE~lL~-~~~~~GaFLVR~Se~~~~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV   93 (125)
T 3maz_A           15 MPACFYTVSRKEATEMLQ-KNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVI   93 (125)
T ss_dssp             CCTTBCCCCHHHHHHHHH-HCGGGCSEEEEECTTSSSEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHH
T ss_pred             CCCCcCCCCHHHHHHHHh-ccCCCCcEEEEeCCCCCCEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHH
Confidence            369999999999998774 466679999   1    01111110 1134453     22 11  45  678899999887


Q ss_pred             c
Q psy11791        132 N  132 (143)
Q Consensus       132 ~  132 (143)
                      +
T Consensus        94 ~   94 (125)
T 3maz_A           94 D   94 (125)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=97.21  E-value=1.8e-05  Score=52.90  Aligned_cols=60  Identities=17%  Similarity=0.247  Sum_probs=41.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cC--cc--cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QK--PK--VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~--~~--l~e~~~f~~ip  128 (143)
                      .||.+.|+|.+||++|+..|+..|.||             ||....-  ..++.++     .+  -.  +.+...|+||+
T Consensus         6 ~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~--~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~   83 (106)
T 1aot_F            6 EWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDD--MKGDHVKHYKIRKLDNGGYYITTRAQFETLQ   83 (106)
T ss_dssp             SSCCBSCCHHHHHHHHHTTTCCTTEECCBCBSSSSSBBCCEEECCBT--TTBCCEEECCBEEETTTEEEEETTEEESSHH
T ss_pred             ccCCCCCCHHHHHHHHhhCCCCCcEEEEEeCCCCCCCEEEEEEeccc--CCCCcEEEEEEEEeCCCCEEECCCCccCCHH
Confidence            599999999999999988887779999             3432100  0122232     11  11  66788999999


Q ss_pred             CCcc
Q psy11791        129 SYEN  132 (143)
Q Consensus       129 ~li~  132 (143)
                      +||+
T Consensus        84 ~LV~   87 (106)
T 1aot_F           84 QLVQ   87 (106)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9885

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=97.15  E-value=2.1e-05  Score=52.25  Aligned_cols=62  Identities=21%  Similarity=0.334  Sum_probs=40.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|...|+..|.||   |-..   -++++-.++.++     .+..    +.+...|+||++||+
T Consensus         3 ~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   79 (100)
T 1rja_A            3 PWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVN   79 (100)
T ss_dssp             CCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHH
T ss_pred             CcccCCCCHHHHHHHHhccCCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHH
Confidence            599999999999999998887779999   1100   111211112221     2111    667789999998875

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=97.02  E-value=8e-05  Score=50.59  Aligned_cols=60  Identities=27%  Similarity=0.366  Sum_probs=39.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE------------EEeceecccCCCceec---c----Ccc----cccccCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV------------SVKDRAISIDNNSSIK---Q----KPK----VAKRTIFPVI  127 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~------------sv~~~~~~~~~~~~vk---~----~~~----l~e~~~f~~i  127 (143)
                      .||.+.|+|.+||++|...+.+ |+||            ||...... ..++.++   -    ...    +.++..|+||
T Consensus        10 ~Wyhg~isR~~Ae~lL~~~~~~-G~FLVR~S~~~g~y~LSv~~~~~~-~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl   87 (118)
T 3s9k_A           10 EWYNKSISRDKAEKLLLDTGKE-GAFMVRDSRTPGTYTVSVFTKAII-SENPCIKHYHIKETNDSPKRYYVAEKYVFDSI   87 (118)
T ss_dssp             TTBCTTCCHHHHHHHHHHHCCT-TCEEEEECSSTTCEEEEEEECCSC-SSSCEEEEEEEEECSCSSCCEEEECSCCCSCH
T ss_pred             ceecCCCCHHHHHHHHHhcCCC-CeEEEEeeCCCCCEEEEEEecccc-cCCCceEEEEEeEEECCCCCEEECCCcccCCH
Confidence            5999999999999999876644 9888            33222100 0112232   1    122    6778899999


Q ss_pred             CCCcc
Q psy11791        128 PSYEN  132 (143)
Q Consensus       128 p~li~  132 (143)
                      ++||+
T Consensus        88 ~~LV~   92 (118)
T 3s9k_A           88 PLLIQ   92 (118)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99885

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=96.79  E-value=2.9e-05  Score=54.82  Aligned_cols=43  Identities=19%  Similarity=0.041  Sum_probs=27.6

Q ss_pred             eEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         52 PFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        52 ~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .+..|++|+.+...+... .||.+.|+|.+||++|.. . ..|.||
T Consensus         7 ~~~~~~~~v~~~~~l~~~-~WyhG~isR~eAe~lL~~-~-~~G~FL   49 (141)
T 2vif_A            7 GPMDVTSLTEELKKLAKQ-GWYWGPITRWEAEGKLAN-V-PDGSFL   49 (141)
T ss_dssp             -------HHHHHHHHHHH-TCBCCSCCHHHHHHHTTT-S-CTTCEE
T ss_pred             CCCchhhhhcchhhhccC-CCcccCCCHHHHHHHhcC-C-CCceEE
Confidence            355688999876543332 599999999999999965 2 449998

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=96.75  E-value=6.8e-05  Score=50.42  Aligned_cols=61  Identities=16%  Similarity=0.262  Sum_probs=38.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEece------ecccCCCceec-----cCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKDR------AISIDNNSSIK-----QKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~~------~~~~~~~~~vk-----~~~~---l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|+..+.+ |.||-=.+.      ++++-.++.++     .+..   +.+...|+||++||+
T Consensus         8 ~Wyhg~isr~~Ae~lL~~~~~~-G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~   82 (109)
T 3tkz_A            8 RWFHPNITGVEAENLLLTRGVD-GSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQ   82 (109)
T ss_dssp             CSBCTTCCHHHHHHHHHHHCCT-TEEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHH
T ss_pred             CceecCCCHHHHHHHHhcCCCC-CEEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHHH
Confidence            5999999999999999877744 999810000      11111111221     1111   566778999999885

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=96.45  E-value=0.00036  Score=53.61  Aligned_cols=62  Identities=13%  Similarity=0.088  Sum_probs=40.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEe---ceecccCCCceec-----c--Ccc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVK---DRAISIDNNSSIK-----Q--KPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~---~~~~~~~~~~~vk-----~--~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|++.|+..|.||   |-.   .-++.+-.++.++     .  +-.  +.+...|+||++||.
T Consensus         6 ~Wy~g~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~   82 (254)
T 1a81_A            6 PFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCH   82 (254)
T ss_dssp             TTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             ccccCCCCHHHHHHHHhcCCCCCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHH
Confidence            599999999999999998887779999   100   0011111111221     1  111  667889999998885

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=96.45  E-value=0.00045  Score=45.35  Aligned_cols=60  Identities=7%  Similarity=0.060  Sum_probs=36.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEec------eecccCCCceec------cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKD------RAISIDNNSSIK------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~------~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|..  ...|.|+-=.+      -++.+-.++.++      ....  +.+...|+||++||+
T Consensus         6 ~Wyhg~isr~~Ae~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~   79 (98)
T 3us4_A            6 PWFHGKISGQEAVQQLQP--PEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVE   79 (98)
T ss_dssp             TTBCCSCCHHHHHHHTCS--CCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHHH
T ss_pred             cccCCCCCHHHHHHHccC--CCCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHHH
Confidence            599999999999999963  34599991000      011111111221      1111  667789999999886

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=96.42  E-value=0.00032  Score=46.79  Aligned_cols=59  Identities=10%  Similarity=0.192  Sum_probs=36.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEec------eecccCCCceec------cCcc--cccccCCCCCCCCc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKD------RAISIDNNSSIK------QKPK--VAKRTIFPVIPSYE  131 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~------~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li  131 (143)
                      .||.+.|+|.+||++|..  ...|.||-=.+      -++++-.++.++      ....  +.+...|+||++||
T Consensus         9 ~Wyhg~isr~~Ae~lL~~--~~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv   81 (106)
T 3eaz_A            9 PWFHGKITREQAERLLYP--PETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLV   81 (106)
T ss_dssp             TTBCCSCCHHHHHHHTCS--CCTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHH
T ss_pred             CCcCCCCCHHHHHHHhCC--CCCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHH
Confidence            599999999999999974  34599991100      011111111221      1111  66788999999988

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=96.41  E-value=0.00049  Score=46.33  Aligned_cols=60  Identities=13%  Similarity=0.167  Sum_probs=36.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEec------eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKD------RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~------~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|..  +..|+||-=.+      -++++-.++.++     .+..    +.....|+||++||+
T Consensus         6 ~Wyhg~isR~~Ae~lL~~--~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~   80 (112)
T 3k2m_A            6 SWYHGPVSRNAAEYLLSS--GINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVH   80 (112)
T ss_dssp             TTEEESCCHHHHHHHTTT--CCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHH
T ss_pred             cceeeCCCHHHHHHHhcc--CCCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHH
Confidence            599999999999998853  34599991000      011111111221     2121    567789999998874

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=96.37  E-value=0.00092  Score=50.55  Aligned_cols=38  Identities=8%  Similarity=-0.009  Sum_probs=28.5

Q ss_pred             EEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         53 FYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        53 G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      |+||+||....     ...||.+.|+|.+||++|.  ++..|.||
T Consensus         1 g~i~~~~~~l~-----~~~WyhG~isR~eAe~lL~--~~~~G~FL   38 (230)
T 2dvj_A            1 GAMAGNFDSEE-----RSSWYWGRLSRQEAVALLQ--GQRHGVFL   38 (230)
T ss_dssp             --CCSCCCSSS-----SSSSCCSSCCTTHHHHHHT--TSSSSCBE
T ss_pred             CCcCccccccc-----CCCcccCCCCHHHHHHHhc--CCCCceEE
Confidence            78999998532     2369999999999999985  34459999

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=96.25  E-value=0.00068  Score=52.02  Aligned_cols=61  Identities=16%  Similarity=0.230  Sum_probs=41.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|+..|+..|+||   | ..   -++++-.++.++     .++.    +.+...|+||++||.
T Consensus       160 ~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~  235 (254)
T 2oq1_A          160 PWYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE  235 (254)
T ss_dssp             TTBCSSCCHHHHHHHHHSSCCCTTEEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHH
T ss_pred             cccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCCEEECCCceECCHHHHHH
Confidence            699999999999999998887779999   2 10   011111111221     2222    667899999999883

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=96.22  E-value=0.0077  Score=37.94  Aligned_cols=39  Identities=15%  Similarity=0.323  Sum_probs=33.9

Q ss_pred             eecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        24 Ls~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      -.+.+|+.+.|+.+. .+|++++. +|..|||.+.|+....
T Consensus        27 ~~l~~G~~v~vl~~~-~~W~kV~~-~g~~GwV~~~yl~~~~   65 (76)
T 2kt8_A           27 GSLSGNTKVTIVGEE-GAFYKIEY-KGSHGYVAKEYIKDIK   65 (76)
T ss_dssp             EEECTTCEEEEEEEE-TTEEEEEE-TTEEEEEEGGGEEEEE
T ss_pred             EEECCCCEEEEEEEe-CCEEEEEE-CCEEEEEEhHHhCcCC
Confidence            467899999999874 57999998 8999999999998765

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=96.15  E-value=0.00076  Score=46.38  Aligned_cols=58  Identities=16%  Similarity=0.129  Sum_probs=37.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---E-----EeceecccCCCceec------cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---S-----VKDRAISIDNNSSIK------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---s-----v~~~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|.. + ..|.||   |     .+.  +++-.++.++      ....  +.+...|+||++||.
T Consensus        23 ~WyhG~isR~eAe~lL~~-~-~~G~FLVR~S~~~~g~y~--LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~   96 (122)
T 2lnw_A           23 PWFAGNMERQQTDNLLKS-H-ASGTYLIRERPAEAERFA--ISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE   96 (122)
T ss_dssp             TTBCCSCCHHHHHHHHHH-S-CTTBEEEEECCCSSEEEE--EEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHHH
T ss_pred             cCCCcCCCHHHHHHHhcC-C-CCCeEEEEeCCCCCCcEE--EEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHHH
Confidence            699999999999999975 2 349999   1     111  1111112222      1111  677899999999875

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=96.06  E-value=0.01  Score=37.10  Aligned_cols=40  Identities=23%  Similarity=0.517  Sum_probs=33.6

Q ss_pred             ceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        23 eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      --.+.+|+.+.|+++. .+|++++. .|..|||.+.|+....
T Consensus        24 i~~l~~G~~v~v~~~~-~~W~kV~~-~g~~GwV~~~yl~~~~   63 (74)
T 2krs_A           24 IGTLRNNDKVEIIKEV-DGWYEIRF-NGKVGYASKSYITIVN   63 (74)
T ss_dssp             EEEEETTCEEEEEEEE-TTEEEEEE-TTEEEEECSSSEEESS
T ss_pred             HEEECCCCEEEEEEEe-CCEEEEEE-CCeEEEEEhHHcCCCC
Confidence            3467899999999874 57999998 5999999999998654

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=96.01  E-value=0.00089  Score=51.36  Aligned_cols=62  Identities=10%  Similarity=0.058  Sum_probs=39.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----c--Ccc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----Q--KPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~--~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|++.|+..|.||   |-..   -++.+-.++.++     .  +-.  +.+...|+||++||.
T Consensus         7 ~Wyhg~isR~~Ae~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   83 (254)
T 2oq1_A            7 PFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE   83 (254)
T ss_dssp             TTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHhccCCCCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHH
Confidence            699999999999999988887779999   1000   011111111221     1  111  566788999998875

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=95.98  E-value=0.00083  Score=51.54  Aligned_cols=61  Identities=8%  Similarity=0.105  Sum_probs=41.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|+..|+..|.||   | ..   -++++-.++.++     .++.    +.+...|+||++||.
T Consensus       159 ~Wyhg~isR~~Ae~lL~~~g~~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~  234 (254)
T 1a81_A          159 PWFHGKISREESEQIVLIGSKTNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVE  234 (254)
T ss_dssp             TTEEEECCHHHHHHHHHSSCCCTTCEEEEEC-SSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHH
T ss_pred             CccccCCCHHHHHHHHHhcCCCCceEEEEec-CCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHHH
Confidence            699999999999999998887779999   2 10   011111111221     2222    667899999999884

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=95.77  E-value=0.0031  Score=39.06  Aligned_cols=39  Identities=21%  Similarity=0.480  Sum_probs=33.1

Q ss_pred             eecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        24 Ls~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      -.+.+|+.+.|+++ ..+|++++. +|..|||.+.|+...+
T Consensus        26 ~~l~~G~~v~v~~~-~~~W~~V~~-~G~~GwV~~~~l~~~~   64 (70)
T 2kq8_A           26 GALPQGQKVQVISE-NSGWSKINY-NGQTGYIGTRYLSKLE   64 (70)
T ss_dssp             CCCCSSSSCCCCEE-ETTEEEEEE-TTEEEEEETTSCSCCC
T ss_pred             EEECCCCEEEEEEe-cCCEEEEEE-CCEEEEEEhHHccchh
Confidence            35778999999987 468999998 8999999999998654

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=95.76  E-value=0.00055  Score=46.82  Aligned_cols=60  Identities=12%  Similarity=0.168  Sum_probs=37.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec----eecccCCCceec------cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD----RAISIDNNSSIK------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~----~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|..  ...|.||   |-..    -++++-.++.++      ..-.  +.+...|+||++||+
T Consensus        12 ~WyhG~isR~eAe~lL~~--~~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~   86 (120)
T 2iug_A           12 EWYWGDISREEVNEKLRD--TADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN   86 (120)
T ss_dssp             TTBCCSCCHHHHHHHHTT--CCTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHHH
T ss_pred             CccccCCCHHHHHHHhcC--CCCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHHH
Confidence            599999999999999864  3458888   2111    112221111221      1111  667889999999885

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.76  E-value=0.00059  Score=46.55  Aligned_cols=60  Identities=17%  Similarity=0.147  Sum_probs=37.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEe---ceecccCCCceec------cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVK---DRAISIDNNSSIK------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~---~~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|...  ..|.||   |-.   .-++.+--++.++      ....  +.+...|+||++||.
T Consensus        17 ~WyhG~isR~~Ae~lL~~~--~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~   90 (118)
T 2dlz_A           17 PWFAGNMERQQTDNLLKSH--ASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE   90 (118)
T ss_dssp             TTEEESCCHHHHHHHHHHS--CTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHHH
T ss_pred             CceecCCCHHHHHHHhcCC--CCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHHH
Confidence            6999999999999999764  448888   110   0011111111221      2112  677799999998875

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=95.73  E-value=0.0015  Score=43.37  Aligned_cols=27  Identities=15%  Similarity=0.024  Sum_probs=24.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|...|+..|+||
T Consensus         6 ~Wyhg~isR~~Ae~lL~~~g~~~G~FL   32 (105)
T 1nrv_A            6 HWFHGRISREESHRIIKQQGLVDGLFL   32 (105)
T ss_dssp             TTBCTTCCHHHHHHHHHHTTCCTTEEE
T ss_pred             cccCCCCCHHHHHHHHHhcCCCCceEE
Confidence            699999999999999998887779999

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=95.72  E-value=0.0017  Score=44.68  Aligned_cols=38  Identities=11%  Similarity=0.042  Sum_probs=28.0

Q ss_pred             CceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         58 SYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        58 nyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      +||.....+.. ..||.+.|+|.+||++|...+++ |.||
T Consensus         8 ~~Va~~~~l~~-~~WyhG~isR~eAe~lL~~~~~~-G~FL   45 (124)
T 2eob_A            8 DPVPNPNPHES-KPWYYDRLSRGEAEDMLMRIPRD-GAFL   45 (124)
T ss_dssp             CCSCCSCSTTT-STTEESSCCHHHHHHHHHHCCSS-SEEE
T ss_pred             CCcCCccccCc-CCCeecCCCHHHHHHHHhcCCCC-CEEE
Confidence            45544333333 36999999999999999877655 9998

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=95.71  E-value=0.00096  Score=57.22  Aligned_cols=61  Identities=10%  Similarity=0.033  Sum_probs=40.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---E-----EeceecccCCCcee--c--cC--cc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---S-----VKDRAISIDNNSSI--K--QK--PK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---s-----v~~~~~~~~~~~~v--k--~~--~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|+..|+..|+||   |     .++-+++ .++...  +  ..  -.  +.+...|+|+++||+
T Consensus        14 ~Wy~g~isr~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~-~~~~v~h~~i~~~~~g~~~~~~~~~f~sl~~Lv~   90 (635)
T 4fl3_A           14 PFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVA-HGRKAHHYTIERELNGTYAIAGGRTHASPADLCH   90 (635)
T ss_dssp             TTBCBSCCHHHHHHHHHHTTCCTTEEEEEECTTSSSCEEEEEE-ETTEEEEEEEEECTTSCEESTTCCCBSSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHhcCCCCCceEEEeecccCCCCEEEEEE-eCCEEEeEEEEEcCCCCEEeCCCCccCCHHHHHH
Confidence            599999999999999998887679999   1     1111111 122211  1  12  11  778889999999883

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=95.57  E-value=0.00088  Score=44.60  Aligned_cols=58  Identities=12%  Similarity=0.082  Sum_probs=34.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEe---ceecccCCCceec----cCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVK---DRAISIDNNSSIK----QKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~---~~~~~~~~~~~vk----~~~~---l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|.   . .|+||   |-.   .-++++-.++.++    ....   ..+...|+||++||.
T Consensus         8 ~Wyhg~isR~~Ae~lL~---~-~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LI~   78 (104)
T 1mil_A            8 PWFHGKLSRREAEALLQ---L-NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLIS   78 (104)
T ss_dssp             TTBCSSCCHHHHHTTCC---S-TTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHH
T ss_pred             CcCCCCCCHHHHHHHhc---c-CCcEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEECCceeCCHHHHHH
Confidence            69999999999999997   2 38888   110   0011110011121    1111   345789999999885

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=95.56  E-value=0.00093  Score=45.62  Aligned_cols=60  Identities=10%  Similarity=0.018  Sum_probs=36.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEec-----eecccCCCceec-----cCc--c--cc-cccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKD-----RAISIDNNSSIK-----QKP--K--VA-KRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~-----~~~~~~~~~~vk-----~~~--~--l~-e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|.  +...|.||-=.+     -++.+-.++.++     .+.  .  +. +...|+||++||+
T Consensus        17 ~WyhG~isR~~Ae~lL~--~~~~G~FLVR~S~~~~~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~   91 (119)
T 2cs0_A           17 EWFHGAISREDAENLLE--SQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVT   91 (119)
T ss_dssp             SSBCSSCCHHHHHHHHH--TSCTTCEEEEECSSSSSEEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHH
T ss_pred             CccccCCCHHHHHHHhc--CCCCCEEEEEecCCCCCEEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHH
Confidence            69999999999999994  444599991110     111111111221     221  2  43 6789999998875

>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A

Probab=95.54  E-value=0.0012  Score=45.83  Aligned_cols=25  Identities=12%  Similarity=0.082  Sum_probs=21.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|+.  +..|+||
T Consensus        21 ~Wyhg~isR~eAe~lL~~--~~~G~FL   45 (131)
T 2kno_A           21 FWYKPHLSRDQAIALLKD--KDPGAFL   45 (131)
T ss_dssp             HHBCTTCCHHHHHHHHTT--SCTTBEE
T ss_pred             CceecCCCHHHHHHHhcC--CCCCeEE
Confidence            699999999999999965  3459999

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=95.50  E-value=0.0016  Score=55.85  Aligned_cols=61  Identities=10%  Similarity=0.137  Sum_probs=39.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEe-ce----eccc-CCCcee--c--cCcc----cccccCCCCCCCCc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVK-DR----AISI-DNNSSI--K--QKPK----VAKRTIFPVIPSYE  131 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~-~~----~~~~-~~~~~v--k--~~~~----l~e~~~f~~ip~li  131 (143)
                      .||.++|+|.+||++|+..|+..|+||-=- +.    ++++ .++...  +  .+..    +.+...|+||++||
T Consensus       167 ~Wy~g~isr~~ae~~L~~~~~~~G~FLvR~s~~~g~y~lsv~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~~Lv  241 (635)
T 4fl3_A          167 PWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLV  241 (635)
T ss_dssp             TTBCCSCCHHHHHHHHHSSSCCTTCEEEEESSSSSCEEEEEEETTEEEEEEEEECTTSCEESTTCCCBSSHHHHH
T ss_pred             CceeccCCHHHHHHHHHcCCCCCceEEEEecCCCCCEEEEEEECCEEEEEEEEECCCCCEEeCCCCccCCHHHHH
Confidence            599999999999999998887779999100 00    0111 111211  1  1122    67778999999887

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=95.46  E-value=0.00092  Score=47.74  Aligned_cols=25  Identities=8%  Similarity=-0.008  Sum_probs=21.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|..  +..|.||
T Consensus        35 ~WyhG~isR~eAe~lL~~--~~~G~FL   59 (152)
T 2hmh_A           35 GFYWSAVTGGEANLLLSA--EPAGTFL   59 (152)
T ss_dssp             SSEETTCCHHHHHHHHHT--SCTTEEE
T ss_pred             CCcCCCCCHHHHHHHhcC--CCCCcEE
Confidence            699999999999999864  3449998

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=95.38  E-value=0.0024  Score=44.08  Aligned_cols=27  Identities=15%  Similarity=0.069  Sum_probs=25.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|++.|+..|+||
T Consensus        27 ~WyhG~isR~eAe~lL~~~g~~~G~FL   53 (126)
T 2aug_A           27 PWFHHKISRDEAQRLIIQQGLVDGVFL   53 (126)
T ss_dssp             TTEETTCCHHHHHHHHHTTTCCTTEEE
T ss_pred             CcccCCCCHHHHHHHHhccCCCCCEEE
Confidence            699999999999999998888779999

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=95.37  E-value=0.0024  Score=43.07  Aligned_cols=27  Identities=15%  Similarity=-0.021  Sum_probs=24.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|+..|+..|.||
T Consensus        15 ~Wyhg~isR~~Ae~lL~~~g~~~G~FL   41 (117)
T 3pqz_A           15 LWFHGRISREESQRLIGQQGLVDGLFL   41 (117)
T ss_dssp             TTBCCSCCHHHHHHHHHHTTCCTTEEE
T ss_pred             ccccCCCCHHHHHHHHhcCCCCCCEEE
Confidence            599999999999999998888779999

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=95.36  E-value=0.0014  Score=47.50  Aligned_cols=25  Identities=12%  Similarity=0.089  Sum_probs=21.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|.  ++..|.||
T Consensus        18 ~WyhG~isR~eAe~lL~--~~~~G~FL   42 (169)
T 2c9w_A           18 GWYWGSMTVNEAKEKLK--EAPEGTFL   42 (169)
T ss_dssp             SCBCTTCCHHHHHHHHT--TSCTTCEE
T ss_pred             CccccCCCHHHHHHHcC--CCCCcEEE
Confidence            69999999999999985  34459999

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=95.24  E-value=0.00048  Score=52.90  Aligned_cols=61  Identities=18%  Similarity=0.198  Sum_probs=38.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEe-c----eecccCCCceec-----cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVK-D----RAISIDNNSSIK-----QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~-~----~~~~~~~~~~vk-----~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|+..+++ |.|+-=. +    =++++-..+.++     ....  +.+...|+||++||.
T Consensus       123 ~Wyhg~isr~~Ae~lL~~~~~~-G~FLVR~s~~~g~y~Lsv~~~~~v~H~~I~~~~~~~~~~~~~F~sL~~Lv~  195 (246)
T 4fbn_A          123 EWYHASLTRAQAEHMLMRVPRD-GAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLIS  195 (246)
T ss_dssp             TTEESSCCHHHHHHHHHTSCCT-TEEEEEECSSTTEEEEEEEETTEEEEEEEEEETTEEEETTEEESCHHHHHH
T ss_pred             CeeecCccHHHHHHHHhhCCCC-CeEEEEecCCCCCEEEEEEeCCCeEEEEEEeCCCEEEeCCCccCCHHHHHH
Confidence            7999999999999999888776 9998100 0    011111112221     2222  556677999998874

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=95.12  E-value=0.0016  Score=55.66  Aligned_cols=61  Identities=13%  Similarity=0.042  Sum_probs=40.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecc-cC-CCceec----cCcc----cccccCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAIS-ID-NNSSIK----QKPK----VAKRTIFPVI  127 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~-~~-~~~~vk----~~~~----l~e~~~f~~i  127 (143)
                      .||.+.|+|.+||++|+..|.+ |+||             ||...... .+ ....++    ....    +.++..|+||
T Consensus       109 ~Wy~g~~~r~eAe~lL~~~~~~-G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~v~H~~I~~~~~~~~~~~~~~F~sl  187 (595)
T 3ps5_A          109 RWYHGHMSGGQAETLLQAKGEP-WTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSL  187 (595)
T ss_dssp             TTEEESCCHHHHHHHHHHHCCT-TEEEEEECSSSTTCEEEEEEEEEESSSTTSCEEEEEEEEBCGGGCBBSSSSCCBSSH
T ss_pred             ccccccCCHHHHHHHHhccCCC-ceEEEEecCCCCCcEEEEEEECCccccccCCCceEEEEEEEeCCEEEEcCCcCCCCH
Confidence            6999999999999999887865 8998             44333210 00 000221    1111    7788899999


Q ss_pred             CCCcc
Q psy11791        128 PSYEN  132 (143)
Q Consensus       128 p~li~  132 (143)
                      ++||.
T Consensus       188 ~~LV~  192 (595)
T 3ps5_A          188 TDLVE  192 (595)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98874

>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell adapter containing SH2 domain protein; NMR {Mus musculus}

Probab=95.12  E-value=0.001  Score=46.78  Aligned_cols=26  Identities=12%  Similarity=0.129  Sum_probs=22.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|++.+.+ |.||
T Consensus        24 ~WyhG~isR~eAe~lL~~~~~~-G~FL   49 (141)
T 2eo6_A           24 PWYAGACDRKSAEEALHRSNKD-GSFL   49 (141)
T ss_dssp             SSEEESCCHHHHHHHHHHHCCT-TCBC
T ss_pred             CeEecCCCHHHHHHHhhccCCC-ceEE
Confidence            6999999999999999765554 8888

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=95.11  E-value=0.004  Score=40.76  Aligned_cols=26  Identities=12%  Similarity=0.105  Sum_probs=23.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|...++ .|+||
T Consensus         4 ~Wyhg~isR~~Ae~lL~~~~~-~G~FL   29 (96)
T 1jyr_A            4 AWFFGKIPRAKAEEMLSKQRH-DGAFL   29 (96)
T ss_dssp             TTBCCSCCHHHHHHHHHTCCS-TTBEE
T ss_pred             ceeccCCCHHHHHHHHhcCCC-CcEEE
Confidence            599999999999999988775 49999

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=95.02  E-value=0.004  Score=50.67  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=0.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEece---ecccCCCceec-----cCcc----cccccCCCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKDR---AISIDNNSSIK-----QKPK----VAKRTIFPVIPSY  130 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~~---~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~l  130 (143)
                      .||.++|+|.+||.+|..  +..|+||   | -..   ++++--++.|+     .++.    +.++..|+|||+|
T Consensus       302 ~WyhG~isR~~AE~LL~~--~~~G~FLVR~S-s~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~SL~eL  373 (373)
T 3hhm_B          302 TWNVGSSNRNKAENLLRG--KRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL  373 (373)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             CCcCCCCCHHHHHHHhcc--CCCCcEEEEec-CCCCCEEEEEEECCeEEEEEEEEcCCCcEEeCCCCCCCChhhC
Confidence            599999999999998853  3459999   3 111   12221122232     2221    4566899999986

>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A

Probab=95.01  E-value=0.0033  Score=51.15  Aligned_cols=60  Identities=13%  Similarity=0.183  Sum_probs=38.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EE----eceecccCCCceec------cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SV----KDRAISIDNNSSIK------QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv----~~~~~~~~~~~~vk------~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+|+.+|+  ++..|+||   |-    -.-++++-.++.++      ....  +.+...|+||++||+
T Consensus        11 ~WYhG~IsR~eAE~lL~--~~~dG~FLVR~S~s~~~g~y~LSvr~~~~v~H~rI~~~~g~y~l~~~~~F~SL~eLV~   85 (373)
T 3hhm_B           11 EWYWGDISREEVNEKLR--DTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN   85 (373)
T ss_dssp             TTEEESCCHHHHHHHTT--TCCTTEEEEEECSCC--CCEEEEEEETTEEEEEEECCSSSCBCSSSSCCBSSSHHHHH
T ss_pred             CccCCCCCHHHHHHHhc--CCCCCCEEEeccCCCCCCCEEEEEEECCeeEEEEEEecCCeEEeCCCCCcCCHHHHHH
Confidence            59999999999999996  33459998   11    11122221122221      1111  777789999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=94.97  E-value=0.0041  Score=53.00  Aligned_cols=61  Identities=16%  Similarity=0.230  Sum_probs=40.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|.+||++|+..|+..|.||   | ..   =++++--++.++     .+..    +.+...|+||++||+
T Consensus       162 ~wyhg~i~r~~ae~~L~~~~~~~G~FLvR~s-~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~~Lv~  237 (613)
T 2ozo_A          162 PWYHSSLTREEAERKLYSGAQTDGKFLLRPR-KEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE  237 (613)
T ss_dssp             TTBCTTCCHHHHHHHHSSSCCCTTCEEEEEC-SSTTEEEEEEEETTEEEEEEEEECTTCCEECTTSCEESSHHHHHH
T ss_pred             CccccCCCHHHHHHHHhhcCCCCceEEEEec-CCCCCEEEEEEECCeEEEEEEEECCCCCEEECCCCCcCCHHHHHH
Confidence            699999999999999998887779999   2 00   011111111221     1221    667889999998874

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=94.88  E-value=0.0019  Score=55.23  Aligned_cols=61  Identities=13%  Similarity=0.189  Sum_probs=39.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEece------ecccCCCceec-----cCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKDR------AISIDNNSSIK-----QKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~~------~~~~~~~~~vk-----~~~~---l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|+..|.+ |+||-=.+.      +|++-.++.++     ....   +.+...|+||++||+
T Consensus         3 ~Wy~g~isr~~Ae~lL~~~~~~-G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~   77 (595)
T 3ps5_A            3 RWFHRDLSGLDAETLLKGRGVH-GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVE   77 (595)
T ss_dssp             SCCCSSCCHHHHHHHHHHHCCT-TCEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHhhCCCC-CEEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhhh
Confidence            5999999999999999888765 999911110      11111112221     1111   678888999998875

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=94.81  E-value=0.0034  Score=41.49  Aligned_cols=26  Identities=15%  Similarity=0.213  Sum_probs=23.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|++.+.+ |+||
T Consensus         5 ~Wyhg~isR~~Ae~lL~~~~~~-G~FL   30 (104)
T 1d4t_A            5 AVYHGKISRETGEKLLLATGLD-GSYL   30 (104)
T ss_dssp             TTBCCSCCHHHHHHHHHHHCCT-TEEE
T ss_pred             ceEccCCCHHHHHHHHHhcCCC-CEEE
Confidence            5999999999999999877755 9999

>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2 subdomain, PEST motif, protein complex, cytokine regulator; HET: PTR; NMR {Mus musculus}

Probab=94.78  E-value=0.0022  Score=46.39  Aligned_cols=25  Identities=8%  Similarity=-0.008  Sum_probs=20.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|..  +..|.||
T Consensus        24 ~WyhG~IsR~eAe~lL~~--~~~GtFL   48 (164)
T 2bbu_A           24 GFYWSAVTGGEANLLLSA--EPAGTFL   48 (164)
T ss_dssp             SCCCTTSCHHHHHHHHHH--SSTTCCE
T ss_pred             CccCCCCCHHHHHHHhcC--CCCCCEE
Confidence            699999999999998853  3348888

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=94.63  E-value=0.004  Score=41.13  Aligned_cols=26  Identities=15%  Similarity=0.239  Sum_probs=22.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|++.+.+ |+||
T Consensus         6 ~Wyhg~isR~~Ae~lL~~~~~~-G~FL   31 (102)
T 2cia_A            6 EWYYGNVTRHQAECALNERGVE-GDFL   31 (102)
T ss_dssp             TTBCCSCCHHHHHHHHHHHCCT-TEEE
T ss_pred             ccccCCCCHHHHHHHHhhCCCC-cEEE
Confidence            5999999999999999766655 9999

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=94.55  E-value=0.0054  Score=40.41  Aligned_cols=26  Identities=15%  Similarity=0.142  Sum_probs=22.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|.+.+.+ |+||
T Consensus         4 ~Wyhg~isR~~Ae~lL~~~~~~-G~FL   29 (103)
T 1i3z_A            4 PYYHGCLTKRECEALLLKGGVD-GNFL   29 (103)
T ss_dssp             TTEESSCCHHHHHHHHHTTCST-TEEE
T ss_pred             ccccCCCCHHHHHHHHhhcCCC-ceEE
Confidence            5999999999999999876644 9999

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.47  E-value=0.006  Score=41.53  Aligned_cols=26  Identities=12%  Similarity=-0.045  Sum_probs=23.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|+..|.+ |.||
T Consensus        17 ~WyhG~isR~~Ae~lL~~~g~~-G~FL   42 (119)
T 2gsb_A           17 IWFHGKISKQEAYNLLMTVGQV-CSFL   42 (119)
T ss_dssp             SSBCCSSCHHHHHHHHHHTCCS-SEEE
T ss_pred             CcccCCCCHHHHHHHHhhcCCC-CeEE
Confidence            6999999999999999888876 9999

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=94.43  E-value=0.0088  Score=39.37  Aligned_cols=26  Identities=15%  Similarity=0.120  Sum_probs=22.1

Q ss_pred             CCCcccCCCccccccccCcCCCCCCceE
Q psy11791         70 NRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        70 ~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      ..||.+.|+|.+||++|...  ..|+||
T Consensus         9 ~~Wyhg~isR~~Ae~lL~~~--~~G~FL   34 (100)
T 1r1p_A            9 PEWFHEGLSRHQAENLLMGK--DIGFFI   34 (100)
T ss_dssp             TTTSCTTCCHHHHHHHHHTS--CTTBEE
T ss_pred             CCccccCCCHHHHHHHhcCC--CCCEEE
Confidence            36999999999999999765  359998

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=94.25  E-value=0.0067  Score=43.64  Aligned_cols=27  Identities=7%  Similarity=-0.031  Sum_probs=24.9

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|+..++..|.||
T Consensus        13 ~Wyhg~isR~~Ae~lL~~~~~~~G~FL   39 (174)
T 3qwx_X           13 SFYFPGMSREEAHKLLGEPQVSIGTFL   39 (174)
T ss_dssp             GGEETTCCHHHHHHHHHSTTCCTTEEE
T ss_pred             CCccCCCCHHHHHHHHhccCCCCCeEE
Confidence            599999999999999998888779999

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=94.23  E-value=0.0013  Score=50.40  Aligned_cols=62  Identities=13%  Similarity=0.186  Sum_probs=37.9

Q ss_pred             CCcccCC-----CccccccccCc----CCCCCCceE---EEec---eecccCCCceec-----cCc-----c--cccccC
Q psy11791         71 RNNVENI-----NPTMEKTRSYS----EGNDKGGFV---SVKD---RAISIDNNSSIK-----QKP-----K--VAKRTI  123 (143)
Q Consensus        71 ~w~~~~i-----~r~~~e~ll~~----~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~-----~--l~e~~~  123 (143)
                      .||.+.|     +|.+||++|++    .|+..|.||   |-..   =+|++--++.++     .+.     .  +.+...
T Consensus         5 ~WfhG~i~~~~~sR~~AE~lL~~~~~~~~~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~   84 (246)
T 4fbn_A            5 KWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLV   84 (246)
T ss_dssp             TTBCCCCSCC-CHHHHHHHHHHHHHHHHTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTEE
T ss_pred             CCcCCccccccCCHHHHHHHHHHhhhccCCCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCcc
Confidence            5999999     69999999964    466669999   1100   011111111221     111     1  577888


Q ss_pred             CCCCCCCcc
Q psy11791        124 FPVIPSYEN  132 (143)
Q Consensus       124 f~~ip~li~  132 (143)
                      |+||++||+
T Consensus        85 F~sl~~LV~   93 (246)
T 4fbn_A           85 FDSLYDLIT   93 (246)
T ss_dssp             ESSHHHHHH
T ss_pred             cCCHHHHHH
Confidence            999999884

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=94.20  E-value=0.009  Score=40.56  Aligned_cols=26  Identities=15%  Similarity=0.155  Sum_probs=22.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|...+.+ |.||
T Consensus         7 ~WyhG~isR~eAe~lL~~~~~~-G~FL   32 (117)
T 3ov1_A            7 PWFFGKIPRAKAEEMLSKQRHD-GAFL   32 (117)
T ss_dssp             TTBCCSCCHHHHHHHHHTCCST-TBEE
T ss_pred             CcccCCCCHHHHHHHHhCCCCC-CcEE
Confidence            5999999999999999874344 9999

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=94.08  E-value=0.0036  Score=53.36  Aligned_cols=27  Identities=15%  Similarity=0.070  Sum_probs=25.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|++.|+..|.||
T Consensus         9 ~W~~g~i~r~~ae~~L~~~~~~~G~fL   35 (613)
T 2ozo_A            9 PFFYGSISRAEAEEHLKLAGMADGLFL   35 (613)
T ss_dssp             TTBCBSCCHHHHHHHHHTTTCCTTEEE
T ss_pred             CCcCccCCHHHHHHHHhccCCCCCeEE
Confidence            599999999999999998888779999

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=94.05  E-value=0.0072  Score=41.60  Aligned_cols=26  Identities=15%  Similarity=0.213  Sum_probs=23.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|++.+.+ |.||
T Consensus         5 ~WyhG~isR~eAe~lL~~~~~~-G~FL   30 (128)
T 1ka6_A            5 AVYHGKISRETGEKLLLATGLD-GSYL   30 (128)
T ss_dssp             SSBCCSCCHHHHHHHHHHHCCT-TCEE
T ss_pred             cccCCCCCHHHHHHHHhcCCCC-CEEE
Confidence            5999999999999999876755 9999

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=93.91  E-value=0.0042  Score=52.28  Aligned_cols=60  Identities=13%  Similarity=0.187  Sum_probs=38.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEece------ecccCCCceec-----cCcc---cccccCCCCCCCCc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKDR------AISIDNNSSIK-----QKPK---VAKRTIFPVIPSYE  131 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~~------~~~~~~~~~vk-----~~~~---l~e~~~f~~ip~li  131 (143)
                      .||.+.|+|.+||++|+..|.+ |.||-=.+.      ++++-.++.++     ....   +.+...|+||++||
T Consensus         3 ~Wyhg~i~r~~Ae~lL~~~~~~-G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv   76 (532)
T 2b3o_A            3 RWFHRDLSGLDAETLLKGRGVH-GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELV   76 (532)
T ss_dssp             TTBCSSCCHHHHHHHHHHHCCT-TEEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHH
T ss_pred             CceeCCCCHHHHHHHHHhcCCC-CCEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHH
Confidence            5999999999999999888855 999911110      11111112221     2111   56778899999988

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=93.65  E-value=0.0036  Score=52.60  Aligned_cols=60  Identities=17%  Similarity=0.263  Sum_probs=38.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEece------ecccCCCceec-----cCcc---cccccCCCCCCCCc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKDR------AISIDNNSSIK-----QKPK---VAKRTIFPVIPSYE  131 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~~------~~~~~~~~~vk-----~~~~---l~e~~~f~~ip~li  131 (143)
                      .||.++|+|.+||++|+..|.+ |+||-=.+.      ++++-.++.++     .+..   +.+...|+||++||
T Consensus         5 ~Wyhg~i~r~~Ae~lL~~~~~~-G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLv   78 (525)
T 2shp_A            5 RWFHPNITGVEAENLLLTRGVD-GSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELV   78 (525)
T ss_dssp             TTBCSSCCHHHHHHHHHHHCCT-TEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHH
T ss_pred             CcccCCCCHHHHHHHHHhCCCC-CcEEeeccCCCCCcEEEEEEECCEEEEEEEEecCCeEEECCCCeECCHHHHH
Confidence            5999999999999999887755 999911000      11111112221     2222   66778899999886

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=93.49  E-value=0.0067  Score=51.03  Aligned_cols=26  Identities=15%  Similarity=0.109  Sum_probs=23.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||.+|++.+++ |+||
T Consensus       109 ~w~~g~i~r~~Ae~lL~~~~~~-G~FL  134 (532)
T 2b3o_A          109 RWYHGHMSGGQAETLLQAKGEP-WTFL  134 (532)
T ss_dssp             TTBCTTCCHHHHHHHHHHHCCT-TEEE
T ss_pred             cccccccchHHHHHHHhcCCCC-ceEE
Confidence            6999999999999999888876 9998

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=93.34  E-value=0.0044  Score=45.78  Aligned_cols=44  Identities=9%  Similarity=0.118  Sum_probs=29.1

Q ss_pred             CceEEEcCCceeeeeccCCCCCCcccCCCccccccccCcCCCCCCceE
Q psy11791         50 GKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        50 g~~G~vPsnyv~~~~~~~~~~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      ++.++++ +||.+...+... .||.++|+|.+||++|..  +..|+||
T Consensus        16 ~~~~~~~-~~v~~~~~l~~~-~WYhG~isR~eAE~lL~~--~~dGtFL   59 (187)
T 2izv_A           16 ENLYFQS-MLVPDLLQINNN-PCYWGVMDKYAAEALLEG--KPEGTFL   59 (187)
T ss_dssp             -CCSCEE-EECTTHHHHHHC-TTEEEECCHHHHHHHHTT--CCTTEEE
T ss_pred             Ccccccc-ccccchhhcccC-CccccCCCHHHHHHHhcC--CCCCcEE
Confidence            3555553 355544333322 599999999999999853  3459999

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=93.22  E-value=0.018  Score=38.58  Aligned_cols=25  Identities=24%  Similarity=0.284  Sum_probs=21.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|.  ++..|+||
T Consensus        11 ~Wyhg~isR~~Ae~lL~--~~~~G~FL   35 (112)
T 1h9o_A           11 TWNVGSSNRNKAENLLR--GKRDGTFL   35 (112)
T ss_dssp             GTBCCSCCHHHHHHHHT--TCCTTEEE
T ss_pred             CcccCCCCHHHHHHHhc--CCCCceEE
Confidence            69999999999999996  44569999

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=93.16  E-value=0.0074  Score=40.48  Aligned_cols=27  Identities=11%  Similarity=0.047  Sum_probs=23.9

Q ss_pred             CCcccCCCccccccccCcCCC-CCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGN-DKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~-~~G~F~   97 (143)
                      .||.+.|+|.+||++|++.|+ ..|.||
T Consensus        10 ~WyhG~isR~~Ae~lL~~~g~~~~G~FL   37 (111)
T 2hdv_A           10 PWFHGMLSRLKAAQLVLEGGTGSHGVFL   37 (111)
T ss_dssp             TTEEEECCHHHHHHHHHTTGGGGTTEEE
T ss_pred             CCcCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence            599999999999999998873 559999

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=93.07  E-value=0.0096  Score=40.37  Aligned_cols=26  Identities=27%  Similarity=0.325  Sum_probs=22.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|...+.+ |.||
T Consensus        11 ~WyhG~isR~eAe~lL~~~~~~-G~FL   36 (119)
T 2ysx_A           11 CWNHGNITRSKAEELLSRTGKD-GSFL   36 (119)
T ss_dssp             SSEEESCCHHHHHHHHHHHCCT-TEEE
T ss_pred             ccccCCCCHHHHHHHHhhcCCC-CEEE
Confidence            6999999999999999765655 9999

>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1

Probab=93.03  E-value=0.014  Score=48.99  Aligned_cols=61  Identities=18%  Similarity=0.189  Sum_probs=40.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceec---ccCCCceec-----cCcc---cccccCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAI---SIDNNSSIK-----QKPK---VAKRTIFPV  126 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~---~~~~~~~vk-----~~~~---l~e~~~f~~  126 (143)
                      .||.++|+|.+||++|+.++++ |.||             ||.....   ..++...++     ....   +.+...|+|
T Consensus       111 ~w~~g~~~r~~Ae~lL~~~~~~-G~FLVR~S~~~~g~y~LSv~~~~~~~~~~~~~~~v~H~~I~~~~g~~~l~~~~~F~s  189 (525)
T 2shp_A          111 RWFHGHLSGKEAEKLLTEKGKH-GSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDS  189 (525)
T ss_dssp             TTBCCSCCHHHHHHHHHHTCCT-TEEEEEECSSSTTCEEEEEEECC-----CCCCCEEEEEEEEEETTEEESSSSCCBSS
T ss_pred             eeecccCCHHHHHHHHhccCCC-ceEEEEecCCCCCCEEEEEEECCccccccccccceEEEEEEecCCeEEECCCceeCc
Confidence            6999999999999999887765 9998             3332210   001111222     2222   666789999


Q ss_pred             CCCCcc
Q psy11791        127 IPSYEN  132 (143)
Q Consensus       127 ip~li~  132 (143)
                      |++||.
T Consensus       190 L~eLV~  195 (525)
T 2shp_A          190 LTDLVE  195 (525)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=92.72  E-value=0.016  Score=40.37  Aligned_cols=63  Identities=14%  Similarity=0.132  Sum_probs=39.5

Q ss_pred             CCcccCC-CccccccccCcC----CCCCCceE---EEe---ceecccCCCceec-----cC-------cccccccCCCCC
Q psy11791         71 RNNVENI-NPTMEKTRSYSE----GNDKGGFV---SVK---DRAISIDNNSSIK-----QK-------PKVAKRTIFPVI  127 (143)
Q Consensus        71 ~w~~~~i-~r~~~e~ll~~~----g~~~G~F~---sv~---~~~~~~~~~~~vk-----~~-------~~l~e~~~f~~i  127 (143)
                      .||.+.| +|.+||++|+..    |+..|.||   |-.   .-++++-.++.|+     ..       =-+.+...|+||
T Consensus        23 ~WyhG~i~sR~eAe~lL~~~c~~~g~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl  102 (138)
T 2dx0_A           23 KWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSI  102 (138)
T ss_dssp             TTBCTTCCCHHHHHHHHHHHHTTTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSSH
T ss_pred             CcccCCCCCHHHHHHHHHhhccccCCCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCCH
Confidence            6999999 899999999864    56669999   100   0011111111221     11       126778999999


Q ss_pred             CCCccC
Q psy11791        128 PSYENI  133 (143)
Q Consensus       128 p~li~~  133 (143)
                      ++||+-
T Consensus       103 ~eLI~~  108 (138)
T 2dx0_A          103 YALIQH  108 (138)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998753

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=92.26  E-value=0.18  Score=39.32  Aligned_cols=40  Identities=10%  Similarity=0.202  Sum_probs=33.8

Q ss_pred             ceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791         23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus        23 eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .-.+..|+.+.|+++ + +|++++..+|..|||+..++....
T Consensus        34 ~~~l~~G~~v~Vl~~-~-gW~~V~~~dG~~GwV~~~~l~~~~   73 (306)
T 3npf_A           34 STQALLGMPVKVLQY-N-GWYEIQTPDDYTGWVHRMVITPMS   73 (306)
T ss_dssp             EEEEETTCEEEEEEE-S-SEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEcCCCEEEEEEE-C-CEEEEEcCCCCEEEEEhHHeeecC
Confidence            456678999999997 3 599999878999999999998653

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=91.63  E-value=0.034  Score=37.00  Aligned_cols=25  Identities=12%  Similarity=0.070  Sum_probs=21.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|.  ++..|.||
T Consensus         1 ~Wyhg~isr~~Ae~lL~--~~~~G~FL   25 (109)
T 1ju5_A            1 SWYWGRLSRQEAVALLQ--GQRHGVFL   25 (109)
T ss_dssp             CCEETTCCHHHHHHHHT--TCCTTEEE
T ss_pred             CccccCCCHHHHHHHhc--CCCCCEEE
Confidence            49999999999999985  34459999

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=91.41  E-value=0.61  Score=28.99  Aligned_cols=51  Identities=16%  Similarity=0.307  Sum_probs=38.7

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCC-----ceEEEcCCce
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-----KPFYVPASYV   60 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g-----~~G~vPsnyv   60 (143)
                      +.+.-||.+...+  ++++.+|+++.++.-...+...+-+...     .+||+|..-+
T Consensus        10 m~V~~dY~A~ke~--eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~vL   65 (74)
T 1wfw_A           10 MTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSIL   65 (74)
T ss_dssp             EECCSCBCCCSSS--CCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGC
T ss_pred             EEEEeeeeeeccc--eeccccCcEEEEEEecCcceEEEEeecCCCCccccCcccccEe
Confidence            4557788766666  9999999999999887777777665332     6899998543

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=91.37  E-value=0.1  Score=32.36  Aligned_cols=22  Identities=18%  Similarity=0.205  Sum_probs=18.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCC
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEG   29 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~G   29 (143)
                      ..++|+|||+++..+  ||+|.+.
T Consensus        53 ~~~~alydy~a~~~d--Elsf~~~   74 (77)
T 2jmc_A           53 ELVLALYDYQESGDN--APSYSPP   74 (77)
T ss_dssp             CEEEESSCCCCSSCC--CCCSCCC
T ss_pred             ceEEECCCcCCCCCC--ccccCCC
Confidence            468999999988777  9999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=90.98  E-value=0.03  Score=44.27  Aligned_cols=58  Identities=14%  Similarity=0.060  Sum_probs=30.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEe-----ceecccCCCceec-----cCc-c-cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVK-----DRAISIDNNSSIK-----QKP-K-VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~-----~~~~~~~~~~~vk-----~~~-~-l~e~~~f~~ip~li~  132 (143)
                      .||.+.|+|..||++|+   + .|.||-=-     .-.+++--++.++     ... . ..+...|++||+||+
T Consensus        14 ~wyhg~i~r~~a~~lL~---~-~G~flvR~s~~~~~~~lsv~~~~~~~h~~i~~~~~~~~~~~~~F~sl~~LI~   83 (377)
T 3cbl_A           14 LWYHGAIPRAEVAELLV---H-SGDFLVRESQGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLID   83 (377)
T ss_dssp             TTBCTTCCHHHHHHHCC---S-TTEEEEEECC--CCEEEEC-----CCEEEC----CCCCC----CCSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHh---c-CCCEEEEEeCCCCcEEEEEEECCCccchhhccccceEEecceeccchHHHHH
Confidence            69999999999999987   2 38898110     1111211111121     111 1 456778999998774

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=88.67  E-value=0.095  Score=35.39  Aligned_cols=23  Identities=13%  Similarity=0.050  Sum_probs=20.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||++|..    .|.||
T Consensus        18 ~WyhG~isR~eAe~lL~~----~G~FL   40 (116)
T 2kk6_A           18 DWYHGAIPRIEAQELLKK----QGDFL   40 (116)
T ss_dssp             TTEEESCCHHHHHHTCCS----TTCEE
T ss_pred             CCccCCCCHHHHHHHhcc----CCcEE
Confidence            699999999999999972    38888

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	3e-09
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	6e-09
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	1e-08
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	2e-08
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	3e-08
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	5e-08
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	6e-08
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-07
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	1e-07
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	1e-07
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	1e-07
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	2e-07
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	2e-07
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	2e-07
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	2e-07
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	3e-07
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	3e-07
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	3e-07
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	3e-07
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	3e-07
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	5e-07
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	5e-07
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	7e-07
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	8e-07
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	8e-07
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	9e-07
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	9e-07
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	1e-06
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	3e-06
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	3e-06
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	9e-06
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	1e-05
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	2e-05
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-05
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	3e-05
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	4e-05
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	5e-05
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	1e-04
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	2e-04
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	8e-04
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	0.001
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	0.002
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	0.004

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (115), Expect = 3e-09
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y
Sbjct: 5  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.5 bits (113), Expect = 6e-09
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
           +  +YDF  +      +R++ G++  +++K +  WW+     G   Y+P++YV   K  
Sbjct: 4  IVVAMYDFQATEAHD--LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61

Query: 67 S 67
          +
Sbjct: 62 N 62

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 1e-08
 Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+     +   +++++G++ F+++++N  WW+    +G+  Y+P++YV 
Sbjct: 12 VALYDYMPMNAND--LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVT 62

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 2e-08
 Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K LY           +    G     +  + +  W     +GK   +P +YVE     S+
Sbjct: 14 KALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGPSS 71

Query: 69 G 69
          G
Sbjct: 72 G 72

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 3e-08
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K L+D+    +D   +   +   +  ++K    WW+      K  + P++YVE   
Sbjct: 10 KALFDYKAQREDE--LTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 44.5 bits (105), Expect = 5e-08
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+  +      + ++  E+ +L+  +   WW+V   +G   Y P+SY+ 
Sbjct: 2  IALYDYQTNDPQE--LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (106), Expect = 6e-08
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF+   +D   +  + GE + ++  +N  WW   R   K    PA+YV  
Sbjct: 5  RALYDFEALEEDE--LGFRSGEVVEVLDSSNPSWWTG-RLHNKLGLFPANYVAP 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 1e-07
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + L+DFD        +  + G+ + ++  ++ +WW+     G+    P +YV 
Sbjct: 5  QALFDFDPQEDGE--LGFRRGDFIHVMDNSDPNWWKG-ACHGQTGMFPRNYVT 54

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 43.9 bits (104), Expect = 1e-07
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+        +  + G+ + LI K + +WW+  + + +    P++YV  Y
Sbjct: 6  QALFDFNPQESGE--LAFKRGDVITLINKDDPNWWEG-QLNNRRGIFPSNYVCPY 57

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (103), Expect = 1e-07
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + LYDF+    +   +  + GE + ++  ++ +WWQ   +       P+++V 
Sbjct: 6  RALYDFEAVEDNE--LTFKHGELITVLDDSDANWWQG-ENHRGTGLFPSNFVT 55

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 1e-07
 Identities = 11/61 (18%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
            + +K  ++F  + +D   + + +G+ +++ +     WW+    +G+  + P++YV   
Sbjct: 9  HQLIVKARFNFKQTNEDE--LSVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVREI 65

Query: 64 K 64
          K
Sbjct: 66 K 66

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (103), Expect = 2e-07
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
             YD+D +  +   +   E +K+  I+  + DWW   +   G     P++YV +
Sbjct: 4  TAEYDYDAAEDNE--LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL 56

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.1 bits (102), Expect = 2e-07
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+ 
Sbjct: 4  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 54

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 2e-07
 Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK 64
                Y+F  + +    +   +G+ L ++  T + +W++     G+   +PA+YV+  +
Sbjct: 7  TECIAKYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64

Query: 65 KLSNG 69
           +  G
Sbjct: 65 GVKAG 69

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (102), Expect = 2e-07
 Identities = 12/59 (20%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          LQD  +  L+ ++ S      +  ++GE+L +++++ + W     ++G+  ++P ++V 
Sbjct: 4  LQDNLVIALHSYEPSHDGD--LGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 3e-07
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
          + +YD+  +  D   V  ++G+ +  ++  ++ W    ++ +G+   +PA+YVE 
Sbjct: 7  RAMYDYMAADADE--VSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-07
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
            +YD+  + +D   +   +G+ + ++ K + DWWQ    +G     P++YV++    S
Sbjct: 38 IAMYDYAANNEDE--LSFSKGQLINVMNKDDPDWWQG-EINGVTGLFPSNYVKMTTDSS 93

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (101), Expect = 3e-07
 Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYVE 61
          T+ V+ D+    ++   + + +GE + ++    ++   V +     S     +VP S + 
Sbjct: 9  TMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA 66

Query: 62 VYKKLSNG 69
           +   S+G
Sbjct: 67 PFSGPSSG 74

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (101), Expect = 3e-07
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK 65
          T   LYD++  T+    +  ++GE+L ++  T  DWW     S+G+  Y+P++YV     
Sbjct: 4  TFVALYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61

Query: 66 L 66
          +
Sbjct: 62 I 62

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 3e-07
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + L+ ++ +  +   +  QEG+ + ++ K N++W +   S GK    P  +VE
Sbjct: 9  EALFSYEATQPED--LEFQEGDIILVLSKVNEEWLEG-ESKGKVGIFPKVFVE 58

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 5e-07
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEV 62
           ++ LY F   T++   +  ++GE + +I+K     +WW+   + G+   VP +YV V
Sbjct: 8  VVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 5e-07
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             YDF  +  D   +  + G+ L ++ +     W     +GK  ++P +Y+E+
Sbjct: 4  IAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (99), Expect = 7e-07
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+
Sbjct: 9  RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 66

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.7 bits (98), Expect = 8e-07
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEV 62
            LY F         +  ++G+ + ++KK++  + W   R +G+    PA+YVE+
Sbjct: 5  VALYSFAGEESGD--LPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 57

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (98), Expect = 8e-07
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          K ++    +  +   +   +G+ L L+    KD   +    ++    + P+SY ++    
Sbjct: 11 KTIFPHT-AGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGP 69

Query: 67 SNG 69
          S+G
Sbjct: 70 SSG 72

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 9e-07
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +  +     D   V + EGE + +I K    WW + R      Y P+ Y++   +  +
Sbjct: 18 VAIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQKSGQDVS 74

Query: 69 GNRNNVENINPTMEKTRS 86
            +  ++   P    +  
Sbjct: 75 QAQRQIKRGAPPRRSSIR 92

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (97), Expect = 9e-07
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+ 
Sbjct: 5  ALYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYIT 54

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 1e-06
 Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
          + +  LYD++    +   +  Q+G+++ +++++ + W     ++ K  Y+P++YV     
Sbjct: 5  IIVVALYDYEAIHHED--LSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS 62

Query: 66 L 66
          L
Sbjct: 63 L 63

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (93), Expect = 3e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDW--WQVIRSSGKPFYVPASYVEV 62
          KVLY +     D   + I  G+K+ L+ +            ++G+   VP +Y+ +
Sbjct: 3  KVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
           LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV 
Sbjct: 5  ALYDYEAITEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (90), Expect = 9e-06
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K  YDF         + + + + L ++    + WW+V  +SG   +VP + +++ +
Sbjct: 5  KSKYDFVARNSSE--LSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (90), Expect = 1e-05
 Identities = 11/56 (19%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          T + + D++ ++     + +  G+ + +++K+   WW   +   K  ++PAS++E 
Sbjct: 4  TYRAIADYEKTSGSE--MALSTGDVVEVVEKSESGWWFC-QMKAKRGWIPASFLEP 56

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 1e-05
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVI----RSSGKPFYVPASYVEVYK 64
          +V   +  S  +   + +  G+ + ++KK    WWQ          +  + PAS+V++  
Sbjct: 11 QVTSAYVASGSEQ--LSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG 68

Query: 65 KLS 67
            S
Sbjct: 69 PSS 71

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (89), Expect = 2e-05
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSGKPFYVPASYVEVYK 64
            +Y F     +   + +   +KL +++    T    W +   +GK  YVP++Y+   +
Sbjct: 17 FAVYTFKARNPNE--LSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV 62
          + LY F+    D   +    G+ + + +KT  +  W      G   + P +YVE 
Sbjct: 9  RALYPFEARNHDE--MSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEK 61

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 3e-05
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            LY +         +   EGE++ + +K + +WW       +    P++YV+ 
Sbjct: 12 IALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTG-SIGDRSGIFPSNYVKP 61

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 4e-05
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---WWQVIRSSGKPFYVPASYVEVY 63
            L+D++    D   + ++EG+ + +I + ++D   WW   R + K  YVP + + +Y
Sbjct: 8  YALWDYEPQNDDE--LPMKEGDCMTIIHREDEDEIEWWWA-RLNDKEGYVPRNLLGLY 62

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 5e-05
 Identities = 8/66 (12%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          +++  + L  +     +  ++   + + + ++++    W+  +   G   + P SYV++ 
Sbjct: 9  ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQENWWFGEVH--GGRGWFPKSYVKII 64

Query: 64 KKLSNG 69
              +G
Sbjct: 65 PGSESG 70

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (83), Expect = 1e-04
 Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 7  TLKVLYDF----DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYV 60
           ++V  ++          G ++R+  G+ + L K   +  W      ++ +  + P + V
Sbjct: 6  KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRV 65

Query: 61 EVY 63
            Y
Sbjct: 66 HPY 68

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 2e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           +  +     D   V + EGE + +I K    WW + R      Y P+ Y++
Sbjct: 5  AIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQ 53

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.3 bits (78), Expect = 8e-04
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 9  KVLYDFDYSTKDGKYVR---IQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYV 60
          + L+D+D +   G   +    + G+ L +I   +++WWQ  R      +    ++P+   
Sbjct: 5  RALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRR 64

Query: 61 EVYKKLS 67
             ++ S
Sbjct: 65 VERREWS 71

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 6  VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQ--VIRSSGKPFYVPAS 58
            ++    +  + +D     G  +  +  + L + +K N DWW   +++   +  ++P+ 
Sbjct: 22 FAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSP 81

Query: 59 YVEVYKKLSNGNR 71
                +L +  R
Sbjct: 82 VKLENMRLQHEQR 94

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (76), Expect = 0.002
 Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  KVLYDFDYSTKDGKY----VRIQEGEKLFLIKKTNKDW-WQVIRSSGKPFYVPASYVEV 62
             Y ++      +     + +  G+ L++    ++D  ++     G+   VP+++V+ 
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDF 79

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 32.3 bits (73), Expect = 0.004
 Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 16/70 (22%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--------------WWQVIRSSGKPFY 54
          +  +D+  +  D   ++++ G+ + +I   N +              W Q          
Sbjct: 16 QAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGV 73

Query: 55 VPASYVEVYK 64
           P ++ E  +
Sbjct: 74 FPENFTERVQ 83

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.75
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.73
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.73
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.71
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.71
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.71
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.7
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.69
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.68
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.67
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.67
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.67
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.66
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.66
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.65
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.65
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.65
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.64
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.64
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.64
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.63
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.63
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.62
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.62
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.62
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.61
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.61
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.6
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.6
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.6
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.59
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.59
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.59
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.57
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.57
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.55
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.55
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.54
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.53
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.53
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.52
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.48
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.48
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.45
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.38
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	99.26
d1lkka_	105	p56-lck tyrosine kinase {Human (Homo sapiens) [Tax	97.87
d1blja_	114	P55 Blk protein tyrosine kinase {Mouse (Mus muscul	97.84
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	97.78
d1luia_	108	Itk/tsk protein tyrosine kinase {Mouse (Mus muscul	97.7
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	97.6
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	97.58
d1g83a2	104	Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId:	97.53
d1o48a_	106	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.53
d2shpa3	108	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	97.43
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	97.18
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	97.15
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	97.11
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	97.07
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	97.03
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	97.0
d1fu6a_	111	Phosphatidylinositol 3-kinase, p85-alpha subunit {	96.97
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	96.94
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	96.91
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	96.91
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	96.86
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	96.67
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	96.64
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.39
d2cs0a1	106	Hematopoietic SH2 domain containing protein HSH2D	96.33
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	96.24
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	96.18
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	96.09
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	96.01
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	95.71
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	95.6
d1xa6a2	141	Beta-chimaerin, N-terminal domain {Human (Homo sap	94.94
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	94.79
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	94.66
d1uura3	131	STAT homologue {Dictyostelium discoideum [TaxId: 4	86.48
d1bg1a3	141	STAT3b {Mouse (Mus musculus) [TaxId: 10090]}	83.82

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.75  E-value=8.8e-19  Score=104.75  Aligned_cols=53  Identities=25%  Similarity=0.615  Sum_probs=48.7

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      |+|||||.++..+  +|+|++||.+.|+++.+++||.+++.+|+.|+||+|||++
T Consensus         1 V~Alydy~a~~~~--eLs~~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQTNDPQ--ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCCSSTT--BCCCCTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECCCCCC--eeeECCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            6899999977666  9999999999999998999999998889999999999975

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.5e-18  Score=102.71  Aligned_cols=55  Identities=20%  Similarity=0.532  Sum_probs=50.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+|+|||||.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+++
T Consensus         2 tyv~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           2 TYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCeEEEEEHhHEEEC
Confidence            578999999977666  9999999999999998899999998 899999999999863

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=4.4e-18  Score=103.07  Aligned_cols=55  Identities=27%  Similarity=0.594  Sum_probs=50.5

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      .+++|||||+++..+  +|+|++||+|.|+++.+++||.++..+|+.|+||++||++
T Consensus         2 ~~v~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CEEEECCCCCcCCcC--CcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            368999999977766  9999999999999999999999998889999999999985

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.2e-18  Score=104.40  Aligned_cols=58  Identities=21%  Similarity=0.468  Sum_probs=51.7

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|||||+++..+  +|+|++||+|.|++..+++||.++. +|+.|+||++||++..
T Consensus         4 ~g~~v~Aly~y~a~~~~--eLsf~~Gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           4 KGSQVEALFSYEATQPE--DLEFQEGDIILVLSKVNEEWLEGES-KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CCEEEECCSCBCCCSSS--BCCBCSSCEEEEEEESSSSCEEEEC-SSCEEEECGGGCCCSC
T ss_pred             CCCEEEECCCCCCCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHeEECC
Confidence            45678999999977666  9999999999999999999999987 8999999999998653

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.71  E-value=9.6e-18  Score=101.91  Aligned_cols=55  Identities=24%  Similarity=0.539  Sum_probs=50.3

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+|+|||||.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+++
T Consensus         3 ~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yvep~   57 (58)
T d1sema_           3 KFVQALFDFNPQESG--ELAFKRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECCCCCcCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCeEEEEEhhhEEEC
Confidence            578999999977766  9999999999999999999999997 899999999999864

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=9.3e-18  Score=101.63  Aligned_cols=55  Identities=27%  Similarity=0.474  Sum_probs=50.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+|+|||||.++..+  +|+|++||.+.|++..+++||.++. +|+.|+||++||+++
T Consensus         2 ~yarAlydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yve~i   56 (57)
T d1utia_           2 RWARALYDFEALEED--ELGFRSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAPM   56 (57)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCCCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEEHHHEEEc
Confidence            378999999977666  9999999999999999999999997 899999999999864

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=1.1e-17  Score=104.45  Aligned_cols=58  Identities=24%  Similarity=0.613  Sum_probs=52.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|||||.++..+  +|+|++||+|.|+++.+.+||.++..+|+.|+||++||++..
T Consensus         2 ~~~v~Alydf~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~   59 (67)
T d1gl5a_           2 SEIVVAMYDFQATEAH--DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             CSCEEECSCBCCSSSS--BCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESST
T ss_pred             CEEEEECCCCCCCCcC--CcCCCCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEec
Confidence            3468999999977776  999999999999999888999999888999999999998765

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.70  E-value=1.5e-17  Score=100.01  Aligned_cols=54  Identities=35%  Similarity=0.696  Sum_probs=49.2

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .++|+|||.++..+  +|+|++||.+.|+++.+++||.++. .|+.|+||+|||+.+
T Consensus         2 ~~vAl~dy~~~~~~--eLs~~~Gd~v~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCCCcC--CccCCCCCEEEEeEEcCCCEEEEEE-CCeEEEEeHHHEEEC
Confidence            57899999977766  9999999999999999999999997 899999999999863

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=2e-17  Score=100.49  Aligned_cols=54  Identities=20%  Similarity=0.530  Sum_probs=49.2

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      ..|+|+|||.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.
T Consensus         3 rr~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           3 RRVRALYDFEAVEDN--ELTFKHGELITVLDDSDANWWQGEN-HRGTGLFPSNFVTT   56 (58)
T ss_dssp             EEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEES
T ss_pred             CEEEECCCCCCCCcC--CcCCCCCCEEEEeEEeCCCEEEEEE-CCeEEEEehHhEee
Confidence            468999999977666  9999999999999998899999998 79999999999973

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=2.6e-17  Score=100.28  Aligned_cols=56  Identities=21%  Similarity=0.518  Sum_probs=50.1

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+++|+|||.++..+  +|+|++||+|.|+++. ++||.++..+|+.|+||+|||+.+.
T Consensus         2 ~~a~alydf~a~~~~--ELs~~~Gd~i~v~~~~-~~ww~~~~~~g~~G~~P~nyve~i~   57 (59)
T d1i07a_           2 KYAKSKYDFVARNSS--ELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEECGGG-CCEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEEccCCCCCCCC--eeeEcCCCEEEEEEEc-CCcEEEEEcCCCEEEECHHHeEECC
Confidence            468999999977777  9999999999999874 5899999989999999999999875

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=4.3e-17  Score=98.90  Aligned_cols=55  Identities=24%  Similarity=0.450  Sum_probs=49.2

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      +|+|+|||.++..+  +|+|++||.|.|+++.+++||.++.. .|++|+||+|||+.+
T Consensus         2 ~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           2 WATAEYDYDAAEDN--ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEccCCCCCCcC--CcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEEc
Confidence            68999999977766  99999999999999999999999864 579999999999864

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=9.9e-18  Score=111.24  Aligned_cols=60  Identities=18%  Similarity=0.473  Sum_probs=50.3

Q ss_pred             ceEEEEeeccCCCCCC---CCceecCCCCEEEEEecCCCCceEEEe-----CCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~---~~eLs~~~Gd~l~vl~~~~~~WW~~r~-----~~g~~G~vPsnyv~~~~   64 (143)
                      +.+|+|||||++..++   ..+|+|++||+|.|+++.+++||+++.     ..|+.|+||+|||.+..
T Consensus         1 ~~~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~~   68 (96)
T d1kjwa1           1 GFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR   68 (96)
T ss_dssp             CEEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHH
T ss_pred             CEEEEEcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceeeeh
Confidence            3689999999875432   348999999999999999999999985     35789999999998643

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.1e-16  Score=100.84  Aligned_cols=59  Identities=19%  Similarity=0.414  Sum_probs=51.1

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ...|+|||||+++..+  ||+|++||+|.|+++. +.+||.++...|+.|+||++||++...
T Consensus         6 g~~~~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~~   65 (71)
T d1k9aa1           6 GTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG   65 (71)
T ss_dssp             TCEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CCEEEEccCCCCCCCC--CccCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEccc
Confidence            4579999999977766  9999999999999875 557999998779999999999998753

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.3e-16  Score=95.14  Aligned_cols=51  Identities=24%  Similarity=0.483  Sum_probs=46.9

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCcee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      ++|+|+|.++..+  +|+|++||++.|+++.+++||.++. +|+.|+||++||+
T Consensus         3 yval~~y~a~~~~--eLs~~~Gd~v~vl~~~~~gWw~g~~-~g~~G~~P~~yve   53 (53)
T d1wlpb1           3 YVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEECSCBCCCSSS--BCCBCTTCEEEEEECCTTSSEEEES-SSCEEEECSTTEE
T ss_pred             EEEeeeECCCCCC--EecCCCCCEEEEEeecCCceEEEEE-CCcEeEecHHhCC
Confidence            4799999977777  9999999999999999999999996 8999999999985

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.4e-17  Score=99.38  Aligned_cols=55  Identities=20%  Similarity=0.509  Sum_probs=49.5

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..++|+|||.++..+  +|+|++||++.|+++.+.+||.++. +|+.|+||++||+++
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~~~~-~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           3 QTYRAIADYEKTSGS--EMALSTGDVVEVVEKSESGWWFCQM-KAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEEECSSCBCCSSTT--CCCBCTTCEEEEEECCTTSCCEEEE-CCCCCCCCGGGCCCS
T ss_pred             eEEEECccCcCCCCC--CcCCCCCCEEEEEEecCCCeEEEEE-CCCCcEEcHhHEEEC
Confidence            357999999877666  9999999999999999999999997 799999999999764

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.4e-16  Score=100.40  Aligned_cols=57  Identities=28%  Similarity=0.606  Sum_probs=50.6

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC--CCceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~--~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..++|||||+++..+  ||+|++||+|.|+++.+  ++||.+++.+|+.|+||+|||+.+.
T Consensus         7 ~~~~Alydf~~~~~~--eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~   65 (71)
T d1u5sa1           7 HVVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             SEEEESSCCCCCSSS--BCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECC
T ss_pred             EEEEECccCCCCCCC--EeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECC
Confidence            368999999987777  99999999999998753  4799999888999999999999875

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.5e-17  Score=103.78  Aligned_cols=58  Identities=22%  Similarity=0.600  Sum_probs=51.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...|+|+|||+++..+  +|+|++||+|.|+++.+.+||.++..+|+.|+||++||+++.
T Consensus         8 ~~~v~Alydy~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_           8 LKKVVALYDYMPMNAN--DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCEEEBSSCCCCSSSS--SCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CEEEEECcCCCCCCcC--CcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEECc
Confidence            3468999999977777  999999999999999888999998878999999999998764

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=1.1e-16  Score=99.78  Aligned_cols=58  Identities=28%  Similarity=0.616  Sum_probs=48.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-----CCceEEEeCCCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-----KDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-----~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      ..+|+|||||.++..+ .||+|++||+|.|+++.+     .+||+++..+|+.|+||+|||+.+
T Consensus         5 ~~~~~Alydy~~~~~~-~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           5 LEFARALYDFVPENPE-MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             CEEEEESSCBCCSSTT-TBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             CEEEEECccCCCCCCC-CEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            4579999999865431 389999999999998764     479999988899999999999853

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.7e-16  Score=95.73  Aligned_cols=53  Identities=30%  Similarity=0.753  Sum_probs=47.6

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~   62 (143)
                      ++|+|||+++..+  ||+|++||.+.|+++++++||.++. .+|+.|+||+|||++
T Consensus         3 ~vAl~dy~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~p   56 (57)
T d1efna_           3 FVALYDYEAITED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAP   56 (57)
T ss_dssp             EEESSCBCCSSTT--BCCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEE
T ss_pred             EEECCCCCCCCcC--CcCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEE
Confidence            5799999977776  9999999999999998889999986 457999999999975

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1e-16  Score=98.83  Aligned_cols=54  Identities=24%  Similarity=0.613  Sum_probs=47.3

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCC---CCceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN---KDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~---~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .|+|||||+++..+  ||+|++||+|.|+++.+   .+||.++. +|+.|+||+|||+.+
T Consensus         6 ~v~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~~gW~~g~~-~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2           6 VIYALWDYEPQNDD--ELPMKEGDCMTIIHREDEDEIEWWWARL-NDKEGYVPRNLLGLY   62 (63)
T ss_dssp             EEEESSCBCCSSTT--BCCBCSSCEEEECCCCTTSCSSEEEEEE-TTEEEEEEGGGEECC
T ss_pred             EEEEeeCCCCCCCC--CcCCCCCCEEEEEEecCCCCCCEEEEEE-CCeEEEEchHHhEeC
Confidence            57899999977777  99999999999997753   36999998 899999999999864

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.6e-17  Score=107.59  Aligned_cols=57  Identities=23%  Similarity=0.542  Sum_probs=51.5

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|||||+++..+  ||+|++||+|.|+++.+++||+++. +|+.|+||+|||+.+..
T Consensus        35 ~~~~Alydy~a~~~~--ELsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~nyVe~~~~   91 (98)
T d1udla_          35 CQVIAMYDYAANNED--ELSFSKGQLINVMNKDDPDWWQGEI-NGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             EEEEESSCCCCSSTT--SCCCCTTCEEEECBCCSSSEEBCBS-SSCBCCEETTSEEECCC
T ss_pred             cEEEEccCCCCCCCC--EeeEcCCCEEEEeEecCCCeEEEEE-CCeEEEEchHHEEECCC
Confidence            468999999977777  9999999999999998899999986 89999999999987753

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=9.4e-17  Score=102.40  Aligned_cols=57  Identities=19%  Similarity=0.580  Sum_probs=51.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|+|||+++..+  ||+|++||+|.|+++.+++||+++. +|+.|+||++||+.+.
T Consensus        10 ~~~~rAlydy~a~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~i~   66 (76)
T d1ujya_          10 QLIVKARFNFKQTNED--ELSVCKGDIIYVTRVEEGGWWEGTL-NGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CEEEECCSCBCCSSTT--SCCBCSSCCEEESSCCSSSCEEEEE-TTEEEEECTTTSEECC
T ss_pred             CEEEEECccCCCCCCC--CccCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHEEECC
Confidence            4578999999977666  9999999999999998889999997 7999999999999875

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.7e-16  Score=97.96  Aligned_cols=57  Identities=30%  Similarity=0.676  Sum_probs=49.8

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeeec
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~~   65 (143)
                      .++|+|||+++..+  ||+|++||.|.|+++.+++||.++.. .|+.|+||++||++...
T Consensus         4 ~~vAlydf~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~s   61 (64)
T d1fmka1           4 TFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS   61 (64)
T ss_dssp             EEEESSCBCCCSSS--BCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EEEECccCCCcCcC--CcCCCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECcc
Confidence            46899999977766  99999999999999888899999874 57999999999987653

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.4e-17  Score=98.46  Aligned_cols=57  Identities=21%  Similarity=0.491  Sum_probs=49.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      +..++|+|||.++..+  ||+|++||++.|+++.+++||.++.. .|+.|+||+|||+.+
T Consensus         3 G~~~rAl~df~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           3 GKIFRAMYDYMAADAD--EVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCCEECCSCCCCSSSS--BCCCCTTCEECCSEECSSSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             CcEEEECccCCCCCCC--CcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEEEC
Confidence            3468999999977666  99999999999999999999999874 689999999999853

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=3e-16  Score=95.17  Aligned_cols=55  Identities=27%  Similarity=0.564  Sum_probs=47.4

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC--CCceEEEeCCCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~--~~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .+|+|+|||.++..+  ||+|++||.+.|+++.+  .+||.++. +|++|+||+|||+.+
T Consensus         2 P~~~Alydy~a~~~~--ELs~~~Gd~v~vl~~~~~~~~W~~~~~-~g~~G~vP~~yve~i   58 (58)
T d1oota_           2 PKAVALYSFAGEESG--DLPFRKGDVITILKKSDSQNDWWTGRV-NGREGIFPANYVELV   58 (58)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSCTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CeEEEccCCCCCCCC--CccCCCCCEEEEEEeecCCCCEEEEEE-CCcEEEEcHHHEEEC
Confidence            468999999877766  99999999999998864  46888886 899999999999853

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.3e-16  Score=99.35  Aligned_cols=58  Identities=14%  Similarity=0.413  Sum_probs=51.0

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ....++|||||+++..+  ||+|++||+|.|+++ +++||.++. +|+.|+||+|||+.+..
T Consensus         9 ~~~~~~alydy~a~~~~--ELs~~~Gd~i~vl~~-~~~ww~g~~-~g~~G~fP~~yve~i~~   66 (74)
T d1j3ta_           9 ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQ-QENWWFGEV-HGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEEE-CSSEEEEES-TTCCCEEEGGGEEECCC
T ss_pred             CCeEEEEccCCCCCCCC--EecCCCCCEEEEEEc-cCCeEEEEE-CCcEEEEchhhEEECCC
Confidence            34679999999977776  999999999999988 568999987 89999999999998753

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=2.9e-16  Score=99.57  Aligned_cols=58  Identities=16%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-----CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-----SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-----~g~~G~vPsnyv~~~~   64 (143)
                      ...++|||||.+...+  +|+|++||+|.|+++.+.+||.+++.     .|++|+||+|||+++.
T Consensus         7 g~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~   69 (74)
T d1wfwa_           7 GSTMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFS   69 (74)
T ss_dssp             SCEEECCSCBCCCSSS--CCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCC
T ss_pred             CCEEEEeEEECCCCCC--CccCccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEECC
Confidence            4578999999876666  99999999999999988999999874     3689999999998765

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8.5e-16  Score=98.55  Aligned_cols=58  Identities=21%  Similarity=0.376  Sum_probs=50.9

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe----CCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~----~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|||||+++..+  ||+|++||+|.|+++.+++||.++.    ..++.|+||++||+.+.
T Consensus         7 g~~~~al~~y~~~~~~--eLs~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~   68 (80)
T d1ue9a_           7 GEIAQVTSAYVASGSE--QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG   68 (80)
T ss_dssp             CEEEEECSCCCCCSTT--BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECC
T ss_pred             CCEEEECcCCCCCCCC--EeeEcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEECC
Confidence            4579999999977776  9999999999999998899999974    34679999999999875

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=9.2e-16  Score=92.63  Aligned_cols=54  Identities=26%  Similarity=0.488  Sum_probs=46.3

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecCCC-CceEEEeCCCceEEEcCCceeee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVY   63 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~~g~~G~vPsnyv~~~   63 (143)
                      .++|||||+++..+  ||+|++||++.|+.+.+. +||+++. .|++|+||++||++.
T Consensus         2 ~~vAlydy~a~~~~--eLs~~~Gd~i~vl~~~~~~~W~~~~~-~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEES
T ss_pred             EEEECccCCCCCcC--CcCCCCCCEEEEeEecCCCCEEEEEE-CCCEeEEchhheEEC
Confidence            47899999977776  999999999999988655 5777876 889999999999864

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.9e-16  Score=105.61  Aligned_cols=57  Identities=21%  Similarity=0.395  Sum_probs=51.1

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      +..++|||||.++..+  ||+|++||+|.||++.+++||.++. +|++|+||++||+.+.
T Consensus        14 g~~~~alydy~a~~~d--ELs~~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~   70 (118)
T d1ng2a2          14 GEPYVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKSG   70 (118)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEETT
T ss_pred             CcEEEECcCCCCCCCC--EecCCCCCEEEEeEecCCCeEEEEE-CCeEEEEehhhEEECC
Confidence            3567899999977777  9999999999999998999999997 8999999999998753

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.4e-16  Score=98.08  Aligned_cols=57  Identities=19%  Similarity=0.439  Sum_probs=49.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ....++|+|||+++..+  ||+|++||+|.|+++ +++||+++. +|+.|+||++||++..
T Consensus         7 ~~~~~vAl~~y~~~~~~--eLs~~~Gd~v~vl~~-~~~Ww~~~~-~g~~G~vP~~yv~~~~   63 (69)
T d1uhfa_           7 GGEEYIALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTGSI-GDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             CSEEEECSSCBCCSSSS--BCCBCTTCEEEECEE-ETTEEEECS-TTCCEEECGGGCEECC
T ss_pred             CCcEEEECccCCCCCcC--CcCCCCCCEEEEEEe-cCCEEEEEE-CCcEEEEchhhEEECC
Confidence            44678999999977766  999999999999987 468999987 8999999999999764

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=7.4e-16  Score=95.28  Aligned_cols=59  Identities=22%  Similarity=0.617  Sum_probs=49.2

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeC-CCceEEEcCCceeeeecc
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKKL   66 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~-~g~~G~vPsnyv~~~~~~   66 (143)
                      ...++|||||.++..+  ||+|++||.|.|+++ +++||.++.. +|+.|+||+|||++....
T Consensus         4 ~~~vvAlydy~~~~~~--eLs~~~Gd~i~v~~~-~~~ww~~~~~~~g~~G~vP~~yv~~~~~~   63 (65)
T d1qcfa1           4 RIIVVALYDYEAIHHE--DLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSL   63 (65)
T ss_dssp             CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETTCG
T ss_pred             cEEEEECCcCCCCCcC--ccCCCCCCEEEEEEE-CCCCEEEEEccCCCEEEEchHHeEECccC
Confidence            3568999999977666  999999999999986 4578888764 689999999999987543

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.4e-16  Score=93.34  Aligned_cols=53  Identities=23%  Similarity=0.592  Sum_probs=42.0

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeCCCceEEEcCCceee
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~~g~~G~vPsnyv~~   62 (143)
                      .|+|+|||.++..+  ||+|++||.+.|+++. +++||.++. +|+.|+||+|||+.
T Consensus         2 ~a~Alydy~a~~~~--ELs~~~Gd~v~v~~~~~~~~W~~~~~-~g~~G~vP~nyvev   55 (56)
T d1gria1           2 EAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEM   55 (56)
T ss_dssp             EEEECSCBCCCSSS--CCCBCTTCEEEC------CCEEEEES-SSCEEEEEGGGEEC
T ss_pred             EEEEeeCCCCCCCC--CcCCCCCCEEEEEeccCCCCeEEEEE-CCcEEEEehhhEEE
Confidence            58999999977777  9999999999999876 456777775 89999999999963

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-15  Score=100.45  Aligned_cols=57  Identities=19%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC----CCceEEEeCCCceEEEcCCceeeeec
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~----~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      ..++|+|||+++..+  ||+|++||+|.||++.+    .+||+++. +|++||||+|||+.+..
T Consensus        18 ~~~~a~~~f~a~~~~--eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~-~g~~G~~P~~yv~~~~~   78 (92)
T d1ug1a_          18 KLFQAERNFNAAQDL--DVSLLEGDLVGVIKKKDPMGSQNRWLIDN-GVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             GEEEESSCCCCCSSS--CCCCCTTCEEEEEESCCTTSCSSEEEEEC-SSSEEEEEGGGEEECCC
T ss_pred             eEEEEcCCcCCCCCC--eEEEecccEEEEEEcccccccCCceEEEe-cccEEEEEhhhceecCC
Confidence            468999999977777  99999999999999864    57999987 89999999999998753

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.4e-15  Score=97.57  Aligned_cols=57  Identities=23%  Similarity=0.524  Sum_probs=49.6

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC----CCCceEEEeCCCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT----NKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~----~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ...++|||||.++..+  ||+|++||+|.|+++.    +.+||+++. .|+.|+||++||+.+.
T Consensus        13 ~~~~~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~-~g~~G~vP~~yv~~~~   73 (79)
T d1uhca_          13 NQVYFAVYTFKARNPN--ELSVSANQKLKILEFKDVTGNTEWWLAEV-NGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             SCCEEESSCBCCCSSS--BCCBCTTCEEEEEESCCTTSCTTEEEEES-SSCEEEEEGGGEEECC
T ss_pred             CEEEEECccCCCCCCC--CccCCCCCEEEEEEeecCCCCCCEEEEEE-CCCEEEEehhhEEECC
Confidence            4468999999977776  9999999999999864    358999986 8999999999999875

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8.8e-17  Score=101.29  Aligned_cols=59  Identities=20%  Similarity=0.449  Sum_probs=51.4

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCceeeee
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..+.|+|||||+++..+  +|+|++||+|.|+++.+++||.++...++.|+||+|||+++.
T Consensus         5 ~~~~v~Aly~f~a~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~   63 (71)
T d2hspa_           5 FKCAVKALFDYKAQRED--ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             SSSCEECCSCCCCSSSS--SCCCCTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSCS
T ss_pred             CcEEEEEcccCCcCCcC--CccCCCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEcC
Confidence            34568999999977766  999999999999999899999998766677899999998775

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.3e-15  Score=97.10  Aligned_cols=59  Identities=22%  Similarity=0.353  Sum_probs=49.8

Q ss_pred             CceEEEEeeccCCCCCCCCceecCCCCEEEEEecCC--CCceEEEeCCCceEEEcCCceeeeec
Q psy11791          4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYKK   65 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~--~~WW~~r~~~g~~G~vPsnyv~~~~~   65 (143)
                      +...++|||||.++..+  ||+|++||+|.|+.+.+  .+||.++. +|+.|+||+|||+.+..
T Consensus         4 ~~~~~rAlydy~~~~~~--ELs~~~Gd~v~Vl~~~~~~~~w~~~~~-~g~~G~~P~~Yve~~~~   64 (93)
T d1uffa_           4 GSSGYRALYPFEARNHD--EMSFNSGDIIQVDEKTVGEPGWLYGSF-QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             SCCCEEESSCBCCCSSS--CCCBCTTCEEEECSSCCCSSSEEEEEE-TTEEEEEETTTEEECCS
T ss_pred             CCeEEEECccCCCCCCC--CccCcCCCEEEEEEeccCCCCEEEEEe-CCcEEEEchHHEEECCC
Confidence            34568999999977766  99999999999998763  45888876 89999999999998754

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.9e-15  Score=91.74  Aligned_cols=55  Identities=20%  Similarity=0.560  Sum_probs=46.4

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecCCCCceEEEe-CCCceEEEcCCceee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~WW~~r~-~~g~~G~vPsnyv~~   62 (143)
                      ...++|||||+++..+  +|+|++||+|.|+++.+ +||.++. .+|+.|+||+|||++
T Consensus         6 ~~~~~al~dy~a~~~~--eLs~~~Gd~i~v~~~~~-~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           6 DNLVIALHSYEPSHDG--DLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TCEEEESSCBCCCSTT--BCCBCTTCEEEEEECCS-SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEECCCCCcCCcC--CcCCCCCCEEEEeEEcC-CCEEEEeccCCeEeEEcHHHEEe
Confidence            3468999999977766  99999999999998864 5777665 468999999999975

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.2e-15  Score=100.03  Aligned_cols=59  Identities=12%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             eEEEEeeccCCCCC----CCCceecCCCCEEEEEecCCC-CceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTK----DGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~----~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      .+|+|+|||++...    ...||+|++||+|.|+++.+. .||.++..+|+.|+||+|||+++.
T Consensus        18 ~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~   81 (96)
T d1wiea_          18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQ   81 (96)
T ss_dssp             EEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCC
T ss_pred             eEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECC
Confidence            46899999986431    224899999999999987655 588887778999999999999775

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=2.9e-15  Score=89.96  Aligned_cols=52  Identities=25%  Similarity=0.457  Sum_probs=43.5

Q ss_pred             EEEeeccCCCCCCCCceecCCCCEEEEEecCCCCc-eEEEe-CCCceEEEcCCcee
Q psy11791          8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDW-WQVIR-SSGKPFYVPASYVE   61 (143)
Q Consensus         8 ~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~~W-W~~r~-~~g~~G~vPsnyv~   61 (143)
                      ++|||||+++..+  ||+|++||.|.|++..+.+| |.++. .+|+.|+||+|||+
T Consensus         2 aralydf~a~~~~--ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1           2 NKVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             CEECSCBCCCSTT--BCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CEEeeeeCCCCCC--EeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            5899999977777  99999999999998876654 55544 46899999999996

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=4.8e-15  Score=93.42  Aligned_cols=59  Identities=14%  Similarity=0.320  Sum_probs=47.7

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC-CCCceEEEeC-CCceEEEcCCceeeee
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRS-SGKPFYVPASYVEVYK   64 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~-~g~~G~vPsnyv~~~~   64 (143)
                      ...|+|||||++.. +.++|+|++||+|.|+.+. +++||.++.. .|+.|+||+|||+.+.
T Consensus         7 ~~~~~Alydy~~~~-~~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~   67 (72)
T d1spka_           7 GQKVKTIFPHTAGN-NKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             SCEEECSSCBCCSS-CSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             CCEEEEeeccCCCC-CCCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECC
Confidence            45789999998643 2348999999999999765 4569988863 5899999999999875

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.9e-15  Score=93.84  Aligned_cols=56  Identities=20%  Similarity=0.342  Sum_probs=48.0

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCCC-CceEEEeCCCceEEEcCCceeeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYK   64 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~~-~WW~~r~~~g~~G~vPsnyv~~~~   64 (143)
                      ..|+|||||.++..+  ||+|++||+|.|+++.++ +||+++. +|+.|+||+|||+.+.
T Consensus        11 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yve~i~   67 (72)
T d1ugva_          11 RKAKALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTL-NGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSCBCCCSSS--BCCBCTTCEEBSCCBCSSTTEEEEES-SSCEEEEEGGGEEECC
T ss_pred             EEEEEcccCCCCCCC--EecCCCCCEEEEeeccCCCCEEEEEe-CCCEEEEchHHEEECC
Confidence            368999999877666  999999999999988655 5778875 8999999999999875

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.53  E-value=4.1e-15  Score=98.57  Aligned_cols=59  Identities=14%  Similarity=0.251  Sum_probs=49.4

Q ss_pred             CceEEEEeeccCCCCCCC-----CceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceee
Q psy11791          4 QDVTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEV   62 (143)
Q Consensus         4 ~~~~~~alydf~~~~~~~-----~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~   62 (143)
                      ...+|+|+|||++..++.     .+|+|++||+|.|+++.+++||.++..  +|+.|+||++|+.+
T Consensus        20 ~~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~~~~e   85 (96)
T d1t0ha_          20 VAFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLE   85 (96)
T ss_dssp             CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             ccEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCcHHHH
Confidence            345799999999776661     139999999999999999999999984  57899999998654

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-15  Score=96.19  Aligned_cols=59  Identities=20%  Similarity=0.412  Sum_probs=50.0

Q ss_pred             ceEEEEeeccCCCCCCCCceecCCCCEEEEEecC---------------CCCceEEEeC-CCceEEEcCCceeeeec
Q psy11791          5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---------------NKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (143)
Q Consensus         5 ~~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~---------------~~~WW~~r~~-~g~~G~vPsnyv~~~~~   65 (143)
                      +..++|||||.++..+  ||+|++||+|.|+.+.               +++||.+++. .|+.|+||+|||+.+..
T Consensus         3 G~~~raly~y~~~~~~--eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           3 GYQYRALYDYKKEREE--DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEEEECSCBCCSSTT--BCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CCEEEEcCccCCCCCC--cccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCC
Confidence            4578999999977777  9999999999999753               3579999974 68999999999998753

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.2e-14  Score=95.83  Aligned_cols=58  Identities=19%  Similarity=0.352  Sum_probs=47.8

Q ss_pred             EEEEeeccCCCCCCCCceecCCCCEEEEEec---CCCCceEEEeC-------CCceEEEcCCceeeeecc
Q psy11791          7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRS-------SGKPFYVPASYVEVYKKL   66 (143)
Q Consensus         7 ~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~---~~~~WW~~r~~-------~g~~G~vPsnyv~~~~~~   66 (143)
                      .++|||||.++..+  +|+|++||+|.|+.+   .+.+||.++..       .|+.||||+|||++....
T Consensus        23 ~~~Alydy~~~~~~--eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~~   90 (106)
T d1i1ja_          23 MAVALQDYMAPDCR--FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTL   90 (106)
T ss_dssp             EEEESSCBCCSSTT--BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEEC
T ss_pred             EEEEccccCCCCCC--CccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEcccc
Confidence            58999999866555  999999999999986   35789999742       357899999999987643

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=1.2e-14  Score=93.85  Aligned_cols=56  Identities=14%  Similarity=0.332  Sum_probs=46.9

Q ss_pred             eEEEEeeccCCCCCCCCceecCCCCEEEEEecCC-----CCceEEEeC---------CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-----KDWWQVIRS---------SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~~~eLs~~~Gd~l~vl~~~~-----~~WW~~r~~---------~g~~G~vPsnyv~~~   63 (143)
                      ..|+|||||+++..+  +|+|++||+|.|+.+.+     ++||.+...         +|+.|+||+|||+.+
T Consensus        13 ~~~~Alydy~a~~~~--ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          13 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             EEEEEceeECCCCCC--EecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            368999999977777  99999999999997753     579998742         367999999999875

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=8.8e-14  Score=86.85  Aligned_cols=58  Identities=19%  Similarity=0.450  Sum_probs=46.9

Q ss_pred             eEEEEeeccCCC----CCCCCceecCCCCEEEEEecC-CCCceEEEeC-CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYS----TKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRS-SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~----~~~~~eLs~~~Gd~l~vl~~~-~~~WW~~r~~-~g~~G~vPsnyv~~~   63 (143)
                      ..++|+++|.+.    +.+.++|+|++||+|.|++.. +.+||.+++. +|+.|+||+|||++.
T Consensus         5 Pk~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             CEEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CcEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            357889888652    234459999999999999764 5689999974 689999999999864

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=1.2e-13  Score=97.71  Aligned_cols=58  Identities=16%  Similarity=0.230  Sum_probs=48.6

Q ss_pred             eEEEEeeccCCCCCC-----CCceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceeee
Q psy11791          6 VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVY   63 (143)
Q Consensus         6 ~~~~alydf~~~~~~-----~~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~~   63 (143)
                      .+|+|+|||++..++     ...|+|++||+|.|+++.+.+||.+++.  +|+.|+||++|+.+.
T Consensus        24 f~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~~~~e~   88 (145)
T d1vyva1          24 FAVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLEN   88 (145)
T ss_dssp             EEEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECHHHHHH
T ss_pred             EEEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCchhhhc
Confidence            369999999876665     1239999999999999999999999973  589999999886653

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.26  E-value=1.2e-12  Score=91.67  Aligned_cols=57  Identities=14%  Similarity=0.253  Sum_probs=47.9

Q ss_pred             eEEEEeeccCCCCCCC-----CceecCCCCEEEEEecCCCCceEEEeC--CCceEEEcCCceee
Q psy11791          6 VTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEV   62 (143)
Q Consensus         6 ~~~~alydf~~~~~~~-----~eLs~~~Gd~l~vl~~~~~~WW~~r~~--~g~~G~vPsnyv~~   62 (143)
                      ..|+|+|||++..++.     ..|+|++||+|.|+++.+.+||.+|..  .|..|+||++|+.+
T Consensus        24 ~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~~~lE   87 (136)
T d1vyua1          24 FAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLE   87 (136)
T ss_dssp             EEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEeccCCCceeccCchHHHh
Confidence            4689999999777662     239999999999999999999999963  46899999998654

>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: p56-lck tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1e-06  Score=57.71  Aligned_cols=60  Identities=20%  Similarity=0.329  Sum_probs=41.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCcc----cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKPK----VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip  128 (143)
                      .||.++|+|.+||++|+..|+..|.||             ||....  ..++..|+     ..+.    +.....|+||+
T Consensus         5 pWy~g~isR~eAe~~L~~~~~~~GtFLVR~S~~~~g~~~lsv~~~~--~~~~~~v~h~~i~~~~~~~~~~~~~~~F~sl~   82 (105)
T d1lkka_           5 PWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFD--QNQGEVVKHYKIRNLDNGGFYISPRITFPGLH   82 (105)
T ss_dssp             TTBCTTCCHHHHHHHHTSTTCCTTCEEEEECSSSTTCEEEEEEEEE--TTTEEEEEEEEEEECTTSCEESSTTSCBSSHH
T ss_pred             CccCCCCCHHHHHHHHHhcCCCCCcEEEEccCCCCCCEEEEEEEcc--cCCCccEEEEEEEEcCCCCEEecCCcccCCHH
Confidence            499999999999999998888889999             222111  01111221     2222    67788899999


Q ss_pred             CCcc
Q psy11791        129 SYEN  132 (143)
Q Consensus       129 ~li~  132 (143)
                      +||.
T Consensus        83 ~LV~   86 (105)
T d1lkka_          83 ELVR   86 (105)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9984

>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: P55 Blk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=7e-07  Score=59.41  Aligned_cols=59  Identities=20%  Similarity=0.307  Sum_probs=41.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCc--c--cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKP--K--VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~--~--l~e~~~f~~ip  128 (143)
                      .||.++|+|.+||++|+..++..|+|+             ||.+..   .++..|+     ...  .  +.++..|+||.
T Consensus        13 ~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~---~~~~~v~H~~i~~~~~g~~~l~~~~~F~sl~   89 (114)
T d1blja_          13 KWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDIT---TQGEVVKHYKIRSLDNGGYYISPRITFPTLQ   89 (114)
T ss_dssp             SSBCCSCCHHHHHHHHSSTTCCTTCEEBCBCTTCSSCEEEEECBCC---TTTCBCCCEEEEEETTTEEEEETTEEESSHH
T ss_pred             CCcCCCCCHHHHHHHHHhcCCCCceEEEeccCCCCCCeEEEEEeec---cCCCEEEEEEEEEcCCCCEEecCCceECCHH
Confidence            599999999999999888777679999             333221   2222232     211  2  67788899999


Q ss_pred             CCcc
Q psy11791        129 SYEN  132 (143)
Q Consensus       129 ~li~  132 (143)
                      +||.
T Consensus        90 eLV~   93 (114)
T d1blja_          90 ALVQ   93 (114)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9983

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.2e-06  Score=57.17  Aligned_cols=60  Identities=17%  Similarity=0.296  Sum_probs=42.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCcee-----ccCcc----cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSI-----KQKPK----VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~v-----k~~~~----l~e~~~f~~ip  128 (143)
                      +||.++|+|.+||++|+..|+..|.|+             ||.....  ..+..|     +.++.    +.+...|+||+
T Consensus         2 ~Wy~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g~~~Lsv~~~~~--~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~   79 (103)
T d1qcfa2           2 EWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDP--RQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ   79 (103)
T ss_dssp             TTEETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEET--TTEEEEEEEEEEECTTSCEESSSSSCBSSHH
T ss_pred             CccCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCCCeEEEEEecCC--CcCceEEEEEEEEcCCCceeecCCcccCCHH
Confidence            599999999999999988887779999             4432210  112223     12222    67888899999


Q ss_pred             CCcc
Q psy11791        129 SYEN  132 (143)
Q Consensus       129 ~li~  132 (143)
                      +||.
T Consensus        80 ~LV~   83 (103)
T d1qcfa2          80 ELVD   83 (103)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9983

>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Itk/tsk protein tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=1.7e-06  Score=57.06  Aligned_cols=59  Identities=29%  Similarity=0.413  Sum_probs=40.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE------------EEeceecccCCCceec-----c--Cc----ccccccCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV------------SVKDRAISIDNNSSIK-----Q--KP----KVAKRTIFPVI  127 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~------------sv~~~~~~~~~~~~vk-----~--~~----~l~e~~~f~~i  127 (143)
                      +||.++|+|.+||++|++.+.+ |+||            ||..+.. +.....++     .  +.    .+.++..|+||
T Consensus         7 ~Wy~g~isR~eAe~lL~~~~~~-G~FLVR~S~~~g~y~LSv~~~~~-~~~~~~i~h~~I~~~~~~~~~~~~~~~~~F~sl   84 (108)
T d1luia_           7 EWYNKSISRDKAEKLLLDTGKE-GAFMVRDSRTPGTYTVSVFTKAI-ISENPCIKHYHIKETNDSPKRYYVAEKYVFDSI   84 (108)
T ss_dssp             TTBCTTCCHHHHHHHHHHHCCT-TEEEEEECCTTTCEEEEEECSCC-TTTCSCEEEEECEECCCSSCCEESSSSCCBSSH
T ss_pred             CCcCCCCCHHHHHHHHHhcCCC-CeEEEEecCCCCCEEEEEEecCC-cccCCceeEEEEEEecCCCceeecCCCcccCCH
Confidence            6999999999999999877765 9999            3332211 12223332     1  11    16778899999


Q ss_pred             CCCc
Q psy11791        128 PSYE  131 (143)
Q Consensus       128 p~li  131 (143)
                      ++||
T Consensus        85 ~~LV   88 (108)
T d1luia_          85 PLLI   88 (108)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9988

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.7e-06  Score=55.31  Aligned_cols=62  Identities=23%  Similarity=0.283  Sum_probs=41.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eeccc-CCCcee----ccCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISI-DNNSSI----KQKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~-~~~~~v----k~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|++.|+..|+|+   |-..   -++.+ .++.+.    ..+..    +.+...|+||++||.
T Consensus         3 pWy~g~isR~~Ae~~L~~~~~~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~   79 (100)
T d1rjaa_           3 PWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVN   79 (100)
T ss_dssp             CCBCTTCCHHHHHHHHSSTTCSSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHH
T ss_pred             CCcCCCCCHHHHHHHHhccCCCCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHH
Confidence            499999999999999998888779999   1000   01111 122221    12222    667778999999885

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.8e-05  Score=48.13  Aligned_cols=41  Identities=27%  Similarity=0.338  Sum_probs=37.4

Q ss_pred             CCceecCCCCEEEEEecCCCCceEEEeCCCceEEEcCCcee
Q psy11791         21 GKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (143)
Q Consensus        21 ~~eLs~~~Gd~l~vl~~~~~~WW~~r~~~g~~G~vPsnyv~   61 (143)
                      ..+|++++||.|.||+..+++-|.+|+..|+-|||+..++.
T Consensus        36 ~~dL~vk~GE~ldVIr~t~~~k~LcRN~~GkYGYV~~~~l~   76 (77)
T d1ri9a_          36 TRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLA   76 (77)
T ss_dssp             TTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSC
T ss_pred             cccCCcCCCCEEEEEEeCCCCeEEEEcCCCcEEEEEeeeec
Confidence            35999999999999999888999999999999999987763

>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine kinase Fyn
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.1e-06  Score=54.06  Aligned_cols=59  Identities=17%  Similarity=0.263  Sum_probs=40.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCcc----cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKPK----VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip  128 (143)
                      .||.++|+|.+||++|+..|+..|+||             |+.....  ..++.|+     ....    +.....|+||+
T Consensus         7 ~Wy~g~i~R~eAe~~L~~~g~~~G~FLVR~S~~~~g~~~Lsv~~~~~--~~~~~v~h~~i~~~~~g~~~~~~~~~F~sl~   84 (104)
T d1g83a2           7 EWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDD--MKGDHVKHYKIRKLDNGGYYITTRAQFETLQ   84 (104)
T ss_dssp             SSBCTTCCHHHHHHHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECS--SSCEEEEEEEEEECTTSCEEETTTEEESSHH
T ss_pred             CCcCCCCCHHHHHHHHHhcCCCCCcEEEeccCCCCCCeEEEEEEeec--CcCCeEEEEEEEEcCCCCEEecCCcccCCHH
Confidence            599999999999999998888779999             3322110  1122221     1221    56777899999


Q ss_pred             CCc
Q psy11791        129 SYE  131 (143)
Q Consensus       129 ~li  131 (143)
                      +||
T Consensus        85 ~LV   87 (104)
T d1g83a2          85 QLV   87 (104)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            988

>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=6.8e-06  Score=53.72  Aligned_cols=59  Identities=19%  Similarity=0.217  Sum_probs=40.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE-------------EEeceecccCCCceec-----cCcc----cccccCCCCCC
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV-------------SVKDRAISIDNNSSIK-----QKPK----VAKRTIFPVIP  128 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~-------------sv~~~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip  128 (143)
                      +||.++|+|.+||++|+..|+..|.||             ||.....  .....|+     ....    +.+...|+||.
T Consensus         6 ~Wy~g~i~R~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~--~~~~~i~h~~i~~~~~g~~~~~~~~~F~sl~   83 (106)
T d1o48a_           6 EWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDN--AKGLNVKHYKIRKLDSGGFYITSRTQFNSLQ   83 (106)
T ss_dssp             TTEEESCCHHHHHHHHCCTTCCTTCEEEEECSSSTTCEEEEEEEEET--TTEEEEEEEEEEECTTSCEESSTTSEESSHH
T ss_pred             CccCCCCCHHHHHHHHHhcCCCCCcEEEEcccCCCCCEEEEEEeccc--CcccceEEEEEEEecCCCEEEcCCeeECCHH
Confidence            599999999999999988887779999             3322100  0111121     1111    67888999999


Q ss_pred             CCc
Q psy11791        129 SYE  131 (143)
Q Consensus       129 ~li  131 (143)
                      +||
T Consensus        84 eLV   86 (106)
T d1o48a_          84 QLV   86 (106)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            998

>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=3.5e-06  Score=54.99  Aligned_cols=26  Identities=15%  Similarity=0.216  Sum_probs=23.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      +||.+.|+|.+||++|+..+++ |+||
T Consensus         1 rWyhG~i~R~~Ae~lL~~~~~~-G~FL   26 (108)
T d2shpa3           1 RWFHGHLSGKEAEKLLTEKGKH-GSFL   26 (108)
T ss_dssp             TTBCCSCCHHHHHHHHHHTCCT-TEEE
T ss_pred             CCCcCCCCHHHHHHHHhhcCCC-CeEE
Confidence            5999999999999999876665 9998

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=2.1e-05  Score=50.74  Aligned_cols=26  Identities=15%  Similarity=0.213  Sum_probs=23.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|++.+.+ |+|+
T Consensus         5 pwyhG~isR~eAe~lL~~~~~~-G~FL   30 (104)
T d1d4ta_           5 AVYHGKISRETGEKLLLATGLD-GSYL   30 (104)
T ss_dssp             TTBCCSCCHHHHHHHHHHHCCT-TEEE
T ss_pred             CccccCCCHHHHHHHHhhCCCC-CeEE
Confidence            5999999999999999877765 9999

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=1.9e-05  Score=51.43  Aligned_cols=27  Identities=15%  Similarity=0.024  Sum_probs=25.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|...|.+.|+|+
T Consensus         6 ~Wyhg~isR~~Ae~lL~~~g~~dG~FL   32 (105)
T d1nrva_           6 HWFHGRISREESHRIIKQQGLVDGLFL   32 (105)
T ss_dssp             TTBCTTCCHHHHHHHHHHTTCCTTEEE
T ss_pred             cccCCCCCHHHHHHHHhhcCCCCceEE
Confidence            599999999999999998888779999

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=7.7e-06  Score=53.84  Aligned_cols=61  Identities=18%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eeccc-CCCceec----cCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISI-DNNSSIK----QKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~-~~~~~vk----~~~~---l~e~~~f~~ip~li~  132 (143)
                      +||.++|+|.+||++|+..+.+ |+||   |-..   -++.+ .++...+    .+..   +.....|+||++||.
T Consensus         4 ~Wy~g~isR~~Ae~lL~~~~~~-G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~   78 (109)
T d2shpa2           4 RWFHPNITGVEAENLLLTRGVD-GSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQ   78 (109)
T ss_dssp             TTBCSSCCHHHHHHHHHHHCCT-TEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHH
T ss_pred             ccccCCCCHHHHHHHHhhCCCC-CeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHH
Confidence            6999999999999999877765 9999   1100   01111 1222211    2112   566678999999876

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=1e-05  Score=55.05  Aligned_cols=62  Identities=10%  Similarity=0.065  Sum_probs=41.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCcee-----ccCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSI-----KQKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~v-----k~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|..|+++|.+.|+..|.||   |-..   -+|++-.++.+     ..+..    +.....|+||++||+
T Consensus         7 pWy~g~i~R~~Ae~~L~~~g~~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~   83 (130)
T d2oq1a1           7 PFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCE   83 (130)
T ss_dssp             TTBCBSCCHHHHHHHHHHTTCCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             CCccCCCCHHHHHHHHHhcCCCCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHH
Confidence            599999999999999998888889999   1000   01111111122     12322    566678999999985

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=2e-05  Score=53.45  Aligned_cols=62  Identities=13%  Similarity=0.071  Sum_probs=40.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCc--c--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKP--K--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~--~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|...|...|+||   |-..   =++++--++.++     .+.  .  +.....|+||.+||.
T Consensus         6 PWyhg~isR~~Ae~lL~~~g~~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~   82 (129)
T d1a81a1           6 PFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCH   82 (129)
T ss_dssp             TTBCSSCCHHHHHHHHHHTTCCTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHH
T ss_pred             CcccCCCCHHHHHHHHHhcCCCCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHH
Confidence            499999999999999998887779999   1110   011111111221     121  1  667788999999985

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=3.4e-05  Score=50.04  Aligned_cols=26  Identities=15%  Similarity=0.142  Sum_probs=22.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|++.+.+ |.|+
T Consensus         4 PWy~g~isR~~AE~lL~~~~~~-G~FL   29 (103)
T d1i3za_           4 PYYHGCLTKRECEALLLKGGVD-GNFL   29 (103)
T ss_dssp             TTEESSCCHHHHHHHHHTTCST-TEEE
T ss_pred             CcccCCCCHHHHHHHHHhCCCC-CeEE
Confidence            4999999999999998766654 9999

>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.97  E-value=7.9e-05  Score=48.63  Aligned_cols=60  Identities=10%  Similarity=0.129  Sum_probs=37.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec----eecccCCCceec----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD----RAISIDNNSSIK----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~----~~~~~~~~~~vk----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|...+  .|+|+   |-..    -.+.+..++.++    ....    +.+...|+||++||.
T Consensus        12 ~WyhG~isR~eAe~lL~~~~--~G~FLVR~S~~~~~~~~~ls~~~~~~~~H~~I~~~~~~~~~~~~~~F~sl~~LV~   86 (111)
T d1fu6a_          12 EWYWGDISREEVNEKLRDTA--DGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNSVVELIN   86 (111)
T ss_dssp             SSCCSSCCSHHHHHHSSSCS--SCCCCCBSSCCSSSCCSBCEEEETTEEEECCCCCTTTCCCTTTTSCCCCTTHHHH
T ss_pred             cCCCCCCCHHHHHHHhCcCC--CCEEEEEeccCCCCccEEEEEecCCceEEEEEEEcCCeEEECCCcccCCHHHHHH
Confidence            69999999999999997543  48998   1110    011111111221    1111    677889999999984

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=1.7e-05  Score=53.44  Aligned_cols=62  Identities=8%  Similarity=0.104  Sum_probs=40.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEe--ceeccc-CCCcee----ccCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVK--DRAISI-DNNSSI----KQKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~--~~~~~~-~~~~~v----k~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|++.|+..|+|+   |-.  +-++.+ .++.+.    ..+..    +.....|+||++||.
T Consensus        30 pWyhg~isR~~Ae~lL~~~g~~~G~FLVR~S~~~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~  105 (125)
T d1a81a2          30 PWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVE  105 (125)
T ss_dssp             TTEEEECCHHHHHHHHHSSCCCTTCEEEEECSSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHH
T ss_pred             CccCCCCCHHHHHHHHHhcCCCCceEEEEecCCCCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHHH
Confidence            499999999999999988888789999   100  001111 122211    12222    556778999999984

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=2.2e-05  Score=52.87  Aligned_cols=62  Identities=15%  Similarity=0.179  Sum_probs=40.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EE--eceecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SV--KDRAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv--~~~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|+..|+..|+|+   |-  ..-++.+-.++.++     .+..    +.....|+||.+||.
T Consensus        30 pWyhg~isR~eAe~lL~~~~~~dGtFLVR~S~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~  105 (124)
T d2oq1a2          30 PWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVE  105 (124)
T ss_dssp             TTBCSSCCHHHHHHHHHSSCCCTTEEEEEECSSTTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHH
T ss_pred             CCccCCCCHHHHHHHHhhcCCCCceEEeEecCCCCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHHH
Confidence            499999999999999998887779999   10  00112211112221     2222    567788999999984

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.91  E-value=3.7e-05  Score=50.21  Aligned_cols=60  Identities=17%  Similarity=0.185  Sum_probs=37.8

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEe--ceeccc-CCCceec-----cCcc--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVK--DRAISI-DNNSSIK-----QKPK--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~--~~~~~~-~~~~~vk-----~~~~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|+..+.+ |.||   |-.  .-++.+ .++ .++     .+..  ..+...|++|.+||.
T Consensus        10 ~Wy~g~i~R~eAe~lL~~~~~~-G~FLVR~S~~~~~yvLSv~~~~-~v~H~~I~~~~~~~~~~~~~F~sl~~LV~   82 (105)
T d2fcia1          10 EWYHASLTRAQAEHMLMRVPRD-GAFLVRKRNEPNSYAISFRAEG-KIKHCRVQQEGQTVMLGNSEFDSLVDLIS   82 (105)
T ss_dssp             CCCCSSSCSHHHHHHHHHSSSS-CCEEEEECSSTTCEEEEEEETT-EECCCEEBCCSSCEECSSSEESTTHHHHH
T ss_pred             CCccCCCCHHHHHHHHHhCCCC-CeEEEEecCCCCCEEEEEEecc-ccEEEEEEecCCeEecCCcccCCHHHHHH
Confidence            5999999999999999887765 9999   100  001111 111 221     2222  455667999998883

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=3.2e-05  Score=49.69  Aligned_cols=26  Identities=15%  Similarity=0.159  Sum_probs=22.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|...+.+ |.|+
T Consensus         4 pWy~g~isR~~Ae~lL~~~~~~-G~FL   29 (96)
T d1jyra_           4 AWFFGKIPRAKAEEMLSKQRHD-GAFL   29 (96)
T ss_dssp             TTBCCSCCHHHHHHHHHTCCST-TBEE
T ss_pred             CccCCCCCHHHHHHHHhhCCCC-CeEE
Confidence            4999999999999998665544 9999

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.67  E-value=8.9e-05  Score=47.54  Aligned_cols=59  Identities=14%  Similarity=0.136  Sum_probs=36.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---E-----EeceecccCCCceec----cCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---S-----VKDRAISIDNNSSIK----QKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---s-----v~~~~~~~~~~~~vk----~~~~---l~e~~~f~~ip~li~  132 (143)
                      +||.++|+|.+|+++|..  +..|.|+   |     .+.-++. .++...+    .++.   ..+...|+||++||.
T Consensus         7 ~Wy~g~isR~~Ae~lL~~--~~~G~FLVR~S~~~~g~~~LSv~-~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~   80 (97)
T d1r1qa_           7 EWFHEGLSRHQAENLLMG--KDIGFFIIRASQSSPGDFSISVR-HEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVD   80 (97)
T ss_dssp             TTBCTTCCHHHHHHHHHT--SCTTCEEEEECSSSTTCEEEEEE-CSSSEEEEECEECTTCCEESSSCCBSSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHhc--CCCCCEEEeecCCCCCCEEEEEE-ecCCeEEEEEEEcCCCeEEeCCCCcCCHHHHHH
Confidence            699999999999999863  4459999   1     1111111 1222211    2222   445567999998885

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00017  Score=46.42  Aligned_cols=25  Identities=12%  Similarity=0.089  Sum_probs=21.4

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+|+++|.  +...|+||
T Consensus        16 ~Wy~g~i~R~~Ae~~L~--~~~~GtFL   40 (103)
T d2c9wa2          16 GWYWGSMTVNEAKEKLK--EAPEGTFL   40 (103)
T ss_dssp             SCBCTTCCHHHHHHHHT--TSCTTCEE
T ss_pred             CCcCCCCCHHHHHHHhc--CCCCCceE
Confidence            59999999999999996  44459999

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00018  Score=46.38  Aligned_cols=60  Identities=10%  Similarity=0.092  Sum_probs=37.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eeccc-CCCcee----ccCcc---cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISI-DNNSSI----KQKPK---VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~-~~~~~v----k~~~~---l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|...  ..|+|+   |-..   =++.+ .++...    +.+..   +.+...|+||.+||+
T Consensus         5 PWy~g~isR~~Ae~lL~~~--~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~   78 (101)
T d1k9aa2           5 PWFHGKITREQAERLLYPP--ETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVE   78 (101)
T ss_dssp             TTBCTTCCHHHHHHHTCSC--CTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHH
T ss_pred             CccCCCCCHHHHHHHHcCC--CCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCHHHHHH
Confidence            4999999999999998653  349998   1000   01222 122221    12222   778889999999984

>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hematopoietic SH2 domain containing protein HSH2D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.00025  Score=45.87  Aligned_cols=26  Identities=15%  Similarity=0.018  Sum_probs=21.9

Q ss_pred             CCCcccCCCccccccccCcCCCCCCceE
Q psy11791         70 NRNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        70 ~~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      +.||.++|+|.+|+++|..  ...|+|+
T Consensus         9 ~pWy~g~isR~eAe~lL~~--~~~G~FL   34 (106)
T d2cs0a1           9 PEWFHGAISREDAENLLES--QPLGSFL   34 (106)
T ss_dssp             CSSBCSSCCHHHHHHHHHT--SCTTCEE
T ss_pred             CCCccCCCCHHHHHHHHcC--CCCCcEE
Confidence            4699999999999998863  3459999

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.24  E-value=0.00012  Score=47.08  Aligned_cols=60  Identities=15%  Similarity=0.160  Sum_probs=36.7

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eeccc-CCCceec----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISI-DNNSSIK----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~-~~~~~vk----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+||++|... . .|+|+   |-..   -++++ .++...+    ..+.    +.....|+||++||.
T Consensus         6 ~Wy~g~isR~eAe~lL~~~-~-~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~   80 (101)
T d1opka2           6 SWYHGPVSRNAAEYLLSSG-I-NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVH   80 (101)
T ss_dssp             TTEEEECCHHHHHHHGGGC-C-TTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHH
T ss_pred             cccCCCCCHHHHHHHhcCC-C-CCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHHH
Confidence            4999999999999988653 3 48898   1100   01111 1122111    2221    667778999999884

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.00023  Score=45.41  Aligned_cols=60  Identities=8%  Similarity=0.112  Sum_probs=37.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec---eecccCCCceec-----cCc-c--cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD---RAISIDNNSSIK-----QKP-K--VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~---~~~~~~~~~~vk-----~~~-~--l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+|+++|..  ...|+|+   |-..   -++++--++.++     .+. .  +.+...|+||.+||+
T Consensus         5 PWy~g~isR~eAe~~L~~--~~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI~   78 (97)
T d1jwoa_           5 PWFHGKISGQEAVQQLQP--PEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVE   78 (97)
T ss_dssp             TTEEESCCHHHHHHHTCS--CCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHHHHHH
T ss_pred             CccCCCCCHHHHHHHhcC--CCCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHHHHHH
Confidence            599999999999999853  3359999   1100   011111111221     221 1  677889999999985

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.00026  Score=45.90  Aligned_cols=23  Identities=9%  Similarity=0.017  Sum_probs=19.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|..    .|+|+
T Consensus         8 pWyhG~i~R~~Ae~lL~~----~G~FL   30 (104)
T d1mila_           8 PWFHGKLSRREAEALLQL----NGDFL   30 (104)
T ss_dssp             TTBCSSCCHHHHHTTCCS----TTEEE
T ss_pred             CCcCCCCCHHHHHHHHhc----CCcEE
Confidence            499999999999999953    37787

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.01  E-value=0.00021  Score=46.35  Aligned_cols=60  Identities=18%  Similarity=0.226  Sum_probs=36.6

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE---EEec--eecccCCCceec-----cCcc----cccccCCCCCCCCcc
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV---SVKD--RAISIDNNSSIK-----QKPK----VAKRTIFPVIPSYEN  132 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~---sv~~--~~~~~~~~~~vk-----~~~~----l~e~~~f~~ip~li~  132 (143)
                      .||.++|+|.+|+++|.  ++..|.|+   |-..  -++.+-..+.++     ..+.    +.....|+||++||.
T Consensus        10 ~Wy~g~isR~eAe~lL~--~~~~G~FLVR~S~~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~   83 (107)
T d1qada_          10 TWNVGSSNRNKAENLLR--GKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVL   83 (107)
T ss_dssp             GTEEEECCHHHHHHHHT--TCCTTEEEEEEC---CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHH
T ss_pred             cccCCCCCHHHHHHHHc--CCCCCcEEEEecCCCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHHH
Confidence            59999999999999885  44559998   1000  111221112221     2222    456678999999885

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.00057  Score=44.61  Aligned_cols=25  Identities=12%  Similarity=0.120  Sum_probs=21.2

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|.  +...|+|+
T Consensus        12 ~Wy~g~isR~~Ae~lL~--~~~~GtFL   36 (112)
T d2izva2          12 PCYWGVMDKYAAEALLE--GKPEGTFL   36 (112)
T ss_dssp             TTEEEECCHHHHHHHHT--TCCTTEEE
T ss_pred             CCcCCCCCHHHHHHHHc--cCCCCcEE
Confidence            59999999999999885  44459999

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.00053  Score=44.86  Aligned_cols=27  Identities=15%  Similarity=-0.021  Sum_probs=25.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|.+.|+..|+|+
T Consensus        11 ~Wy~g~isR~~Ae~lL~~~g~~dG~FL   37 (113)
T d2qmsa1          11 LWFHGRISREESQRLIGQQGLVDGLFL   37 (113)
T ss_dssp             TTEEEEBCHHHHHHHHHHTTCCTTEEE
T ss_pred             CccCCCCCHHHHHHHHhccCCCCccEE
Confidence            599999999999999998887779999

>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Beta-chimaerin, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.0025  Score=43.41  Aligned_cols=24  Identities=17%  Similarity=0.201  Sum_probs=20.5

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.+.|+|.+||.+|.  +++ |.||
T Consensus        36 ~wyhG~isR~eAe~lL~--~~d-GsFL   59 (141)
T d1xa6a2          36 REFHGIISREQADELLG--GVE-GAYI   59 (141)
T ss_dssp             SSEEEECCHHHHHHHHC--SCT-TBEE
T ss_pred             ceeeccCCHHHHHHHHc--CCC-CeEE
Confidence            59999999999999884  344 9999

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.79  E-value=0.0017  Score=40.16  Aligned_cols=27  Identities=15%  Similarity=0.111  Sum_probs=23.2

Q ss_pred             CCcccCCCccccccccCcCC-CCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEG-NDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g-~~~G~F~   97 (143)
                      .||.++|+|.+|+++|...+ +..|+|+
T Consensus         6 pWyhg~isR~~Ae~lL~~~~~~~dG~FL   33 (86)
T d1rpya_           6 PWFHGTLSRVKAAQLVLAGGPRSHGLFV   33 (86)
T ss_dssp             TTBCTTCCHHHHHHHHHTTGGGGTTCEE
T ss_pred             cccCCCCCHHHHHHHHHhCCCCCCceEE
Confidence            49999999999999998765 4559999

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.004  Score=39.71  Aligned_cols=25  Identities=12%  Similarity=0.070  Sum_probs=21.1

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .||.++|+|.+||++|.  +...|+|+
T Consensus         1 sWy~g~isR~~Ae~lL~--~~~~G~FL   25 (109)
T d2eyva1           1 SWYWGRLSRQEAVALLQ--GQRHGVFL   25 (109)
T ss_dssp             TSCCBCCCHHHHHHHCS--SCSTTCEE
T ss_pred             CCCCCCCCHHHHHHHhc--CCCCCeEE
Confidence            49999999999999885  34459999

>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT homologue
species: Dictyostelium discoideum [TaxId: 44689]

Probab=86.48  E-value=0.11  Score=34.25  Aligned_cols=25  Identities=12%  Similarity=0.081  Sum_probs=21.3

Q ss_pred             CCcccCCCccccccccCcCCCCCCceE
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFV   97 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~   97 (143)
                      .|+.+.|+|.+|+++|+.  +..|.||
T Consensus        10 ~~~~G~isr~~ae~~L~~--~~~GtFL   34 (131)
T d1uura3          10 GIIYGYMGRQEVNDALQN--QDPGTFI   34 (131)
T ss_dssp             TSSCBSCCHHHHHHTTSS--CCTTCEE
T ss_pred             CcEEccCCHHHHHHHHhc--CCCCeEE
Confidence            599999999999999964  3459999

>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: STAT3b
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.82  E-value=0.26  Score=32.99  Aligned_cols=29  Identities=14%  Similarity=0.052  Sum_probs=23.0

Q ss_pred             CCcccCCCccccccccCcCCCCCCceEEEec
Q psy11791         71 RNNVENINPTMEKTRSYSEGNDKGGFVSVKD  101 (143)
Q Consensus        71 ~w~~~~i~r~~~e~ll~~~g~~~G~F~sv~~  101 (143)
                      .|+.+.|+|.+|+++|+.+  ..|.||-=++
T Consensus         8 gw~~G~isr~~a~~~L~~~--~~GtFLvR~S   36 (141)
T d1bg1a3           8 GYIMGFISKERERAILSTK--PPGTFLLRFS   36 (141)
T ss_dssp             SCCCBCCCTTGGGTTTTTS--CTTCBCEEEC
T ss_pred             CeEEEeCCHHHHHHHhhCC--CCCeEEEEec
Confidence            5999999999999998643  4599994433