Psyllid ID: psy12185


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
MFDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
cccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccEEccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccEEEEEEEEcccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccccccccEEcccccccccccEEcccccccccccEccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcHcccccccccHHHHHHHHHHHcccccccccccccEccccccccccccccEEEEccEEEEcccccHHHHHHHHHccccEEEEEEccccEEEcccEEEccccccccccccEEEEEEccccccEcc
MFDVKNVLFIVALIALCFLAipvkvskpnlEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNknrqspesarygitefsdlseeEFKTRHLRHSVNkhvlmshhkhhdhhhnhvkkrsittgitiptgipvkkdwreagiigkvrnqqtcgacwafsTVETAESMHALKNGTLSLLSVQEVIdcagngnmgcsggdfcalldwmdvnkvvlepeseypllLKDAAckrkatspngvkiksytcdtlipsessiltdiathgpVIAAVNALTWQYYLGGViqyncdgslaninhavqivgydnysrtwc
MFDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKsysksehdirfKNFEKSLDIIEElnknrqspesaryGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKhhdhhhnhvkkrsittgitiptgipvkkdwREAGIIgkvrnqqtcgACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACkrkatspngvkiksytcdTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
MFDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNkhvlmshhkhhdhhhnhvkkRSittgitiptgipVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
***VKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFS*********************************************************************VL***********NHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTW*
****KNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSV*************************TGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
MFDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLM****************SITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
*FDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSV*********************RSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFDVKNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTWC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query317 2.2.26 [Sep-21-2011]
P43234321 Cathepsin O OS=Homo sapie yes N/A 0.747 0.738 0.383 1e-40
Q8BM88312 Cathepsin O OS=Mus muscul yes N/A 0.750 0.762 0.335 1e-35
Q54TR1531 Counting factor associate yes N/A 0.817 0.487 0.331 2e-33
Q9R014334 Cathepsin J OS=Mus muscul no N/A 0.864 0.820 0.325 1e-30
O65493355 Xylem cysteine proteinase yes N/A 0.807 0.721 0.313 2e-30
Q9LM66356 Xylem cysteine proteinase no N/A 0.804 0.716 0.311 3e-30
O97397324 Cathepsin L-like proteina N/A N/A 0.873 0.854 0.306 5e-30
P25804363 Cysteine proteinase 15A O N/A N/A 0.785 0.685 0.321 5e-30
P04988343 Cysteine proteinase 1 OS= no N/A 0.876 0.810 0.287 8e-29
Q63088334 Cathepsin J OS=Rattus nor no N/A 0.861 0.817 0.321 1e-28
>sp|P43234|CATO_HUMAN Cathepsin O OS=Homo sapiens GN=CTSO PE=2 SV=1 Back     alignment and function desciption
 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 21/258 (8%)

Query: 60  FEKSLDIIEELNKNRQSPES-ARYGITEFSDLSEEEFKTRHLRHSVNKHVLMSHHKHHDH 118
           F +SL+    LN    S  S A YGI +FS L  EEFK  +LR   +K    S   H   
Sbjct: 44  FRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVH--- 100

Query: 119 HHNHVKKRSITTGITIP-TGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHAL 177
                        ++IP   +P++ DWR+  ++ +VRNQQ CG CWAFS V   ES +A+
Sbjct: 101 -------------MSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAI 147

Query: 178 KNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKR 237
           K   L  LSVQ+VIDC+ N N GC+GG     L+W++  +V L  +SEYP   ++  C  
Sbjct: 148 KGKPLEDLSVQQVIDCSYN-NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHY 206

Query: 238 KATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSL 297
            + S +G  IK Y+       E  +   + T GP++  V+A++WQ YLGG+IQ++C  S 
Sbjct: 207 FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHC--SS 264

Query: 298 ANINHAVQIVGYDNYSRT 315
              NHAV I G+D    T
Sbjct: 265 GEANHAVLITGFDKTGST 282




Proteolytic enzyme possibly involved in normal cellular protein degradation and turnover.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 4EC: 2
>sp|Q8BM88|CATO_MOUSE Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1 Back     alignment and function description
>sp|Q54TR1|CFAD_DICDI Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1 Back     alignment and function description
>sp|Q9R014|CATJ_MOUSE Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|O97397|CATLL_PHACE Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1 Back     alignment and function description
>sp|P25804|CYSP_PEA Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|P04988|CYSP1_DICDI Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2 Back     alignment and function description
>sp|Q63088|CATJ_RAT Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
350415610355 PREDICTED: cathepsin O-like [Bombus impa 0.936 0.836 0.515 1e-83
328789602368 PREDICTED: cathepsin O-like [Apis mellif 0.933 0.804 0.5 1e-81
380026170368 PREDICTED: cathepsin O-like [Apis florea 0.946 0.815 0.503 2e-81
383852175370 PREDICTED: cathepsin O-like [Megachile r 0.952 0.816 0.471 1e-78
340710428355 PREDICTED: cathepsin O-like [Bombus terr 0.899 0.802 0.503 2e-77
307206026353 Cathepsin O [Harpegnathos saltator] 0.917 0.824 0.476 6e-76
332024588356 Cathepsin O [Acromyrmex echinatior] 0.921 0.820 0.473 7e-75
307169691358 Cathepsin O [Camponotus floridanus] 0.914 0.810 0.490 3e-73
156553312345 PREDICTED: cathepsin O-like [Nasonia vit 0.858 0.788 0.486 3e-69
401758202368 cathepsin O2-like protease [Chilo suppre 0.974 0.839 0.422 4e-68
>gi|350415610|ref|XP_003490694.1| PREDICTED: cathepsin O-like [Bombus impatiens] Back     alignment and taxonomy information
 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/316 (51%), Positives = 210/316 (66%), Gaps = 19/316 (6%)

Query: 5   KNVLFIVALIALCFLAIPVKVSKPNLEQKLELFSSFQQRYKKSYSK--SEHDIRFKNFEK 62
           + V  IV +++LCFLAIP++VS       L+LF ++  RY KSY    +E++ RFK F K
Sbjct: 4   RTVAVIVLVVSLCFLAIPIRVSPNTSNGDLKLFQNYVMRYNKSYRNDPTEYEERFKRFLK 63

Query: 63  SLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSV----NKHVLMSHHKHHD- 117
           SL  IE++N  R S ESA YG+TEFSD+SE+EF +  L   +     KHV  S+H+ H  
Sbjct: 64  SLRHIEKMNGLRPSQESAYYGLTEFSDMSEDEFLSLTLLPDLPARGEKHVNESYHRRHHL 123

Query: 118 -HHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHA 176
               N VKK            IP++ DWR+ G+I  VRNQ +CGACWAFSTVE  ESM+A
Sbjct: 124 LQSTNRVKK---------SVSIPLRFDWRDKGVITPVRNQGSCGACWAFSTVEVVESMYA 174

Query: 177 LKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACK 236
           +KNGTL +LSVQE+IDCA N N GC GGD C+LL W+  +KV +  ES YPL+ K + CK
Sbjct: 175 IKNGTLHMLSVQEMIDCAKNSNFGCEGGDICSLLSWLLASKVQIFQESTYPLVGKTSMCK 234

Query: 237 --RKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPVIAAVNALTWQYYLGGVIQYNCD 294
             +     +GVKI+ + CD  + +E  +L  +ATHGPV AAVNAL+WQ YLGGVIQY+CD
Sbjct: 235 LGKMIDKASGVKIRDFNCDNFVDAEDELLITVATHGPVAAAVNALSWQNYLGGVIQYHCD 294

Query: 295 GSLANINHAVQIVGYD 310
            S  N+NHAVQIVGYD
Sbjct: 295 SSFDNLNHAVQIVGYD 310




Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789602|ref|XP_623690.2| PREDICTED: cathepsin O-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380026170|ref|XP_003696831.1| PREDICTED: cathepsin O-like [Apis florea] Back     alignment and taxonomy information
>gi|383852175|ref|XP_003701604.1| PREDICTED: cathepsin O-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340710428|ref|XP_003393792.1| PREDICTED: cathepsin O-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|307206026|gb|EFN84119.1| Cathepsin O [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332024588|gb|EGI64786.1| Cathepsin O [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307169691|gb|EFN62267.1| Cathepsin O [Camponotus floridanus] Back     alignment and taxonomy information
>gi|156553312|ref|XP_001599758.1| PREDICTED: cathepsin O-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|401758202|gb|AFQ01136.1| cathepsin O2-like protease [Chilo suppressalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
ZFIN|ZDB-GENE-080724-8334 ctso "cathepsin O" [Danio reri 0.520 0.494 0.416 4.6e-40
UNIPROTKB|P43234321 CTSO "Cathepsin O" [Homo sapie 0.536 0.529 0.421 2.5e-39
UNIPROTKB|F1P0K2320 CTSO "Uncharacterized protein" 0.526 0.521 0.435 1.5e-37
MGI|MGI:2139628312 Ctso "cathepsin O" [Mus muscul 0.533 0.541 0.396 1e-36
UNIPROTKB|F1PGK4316 CTSO "Uncharacterized protein" 0.750 0.753 0.365 1.7e-36
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.507 0.453 0.355 4.9e-33
UNIPROTKB|E1BPI9313 CTSO "Uncharacterized protein" 0.520 0.527 0.416 6.7e-33
DICTYBASE|DDB_G0291191352 DDB_G0291191 "cysteine proteas 0.470 0.423 0.353 5.5e-32
MGI|MGI:1349426334 Ctsj "cathepsin J" [Mus muscul 0.511 0.485 0.377 6.9e-32
RGD|69241334 Ctsj "cathepsin J" [Rattus nor 0.511 0.485 0.377 1.8e-31
ZFIN|ZDB-GENE-080724-8 ctso "cathepsin O" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 356 (130.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
 Identities = 70/168 (41%), Positives = 100/168 (59%)

Query:   143 DWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCS 202
             DWR+ G++G V NQ +CG CWAFS VE  ES+ A     L  LSVQ+VIDC+   N GC+
Sbjct:   126 DWRDHGVVGPVHNQGSCGGCWAFSIVEAIESVSAKGGEKLQQLSVQQVIDCSYQ-NQGCN 184

Query:   203 GGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSI 262
             GG     L W+  +K+ L  E+EYP    D  C+    +  GV +++Y+       E  +
Sbjct:   185 GGSPVEALYWLTQSKLKLVSEAEYPFKGADGVCQFFPQAHAGVAVRNYSAYDFSGQEEVM 244

Query:   263 LTDIATHGPVIAAVNALTWQYYLGGVIQYNCDGSLANINHAVQIVGYD 310
             ++ +   GP++  V+A++WQ YLGG+IQ++C    AN  HAV I GYD
Sbjct:   245 MSALVDFGPLVVIVDAISWQDYLGGIIQHHCSSHKAN--HAVLITGYD 290


GO:0008234 "cysteine-type peptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
UNIPROTKB|P43234 CTSO "Cathepsin O" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0K2 CTSO "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2139628 Ctso "cathepsin O" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PGK4 CTSO "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPI9 CTSO "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291191 DDB_G0291191 "cysteine protease" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1349426 Ctsj "cathepsin J" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|69241 Ctsj "cathepsin J" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8BM88CATO_MOUSE3, ., 4, ., 2, 2, ., 4, 20.33590.75070.7628yesN/A
P43234CATO_HUMAN3, ., 4, ., 2, 2, ., 4, 20.38370.74760.7383yesN/A
O65493XCP1_ARATH3, ., 4, ., 2, 2, ., -0.31350.80750.7211yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.22LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-55
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 9e-47
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 8e-40
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 2e-34
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 6e-28
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-24
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-19
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 4e-14
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 6e-14
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 7e-14
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 4e-13
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 4e-13
PTZ00364 548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-06
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 0.002
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
 Score =  179 bits (457), Expect = 1e-55
 Identities = 66/169 (39%), Positives = 99/169 (58%), Gaps = 6/169 (3%)

Query: 143 DWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCS 202
           DWRE G +  V++Q +CG+CWAFSTV   E  +A+K G L  LS Q+++DC+ +GN GC+
Sbjct: 5   DWREKGAVTPVKDQGSCGSCWAFSTVGALEGAYAIKTGKLVSLSEQQLVDCSTSGNNGCN 64

Query: 203 GGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSI 262
           GG+     +++    +    ES+YP   KD  CK   +S  G KI  Y  +     E ++
Sbjct: 65  GGNPDNAFEYVKNGGLAS--ESDYPYTGKDGTCKYN-SSKVGAKITGY-SNVPPGDEEAL 120

Query: 263 LTDIATHGPVIAAVNA-LTWQYYLGGVIQYNCDGSLANINHAVQIVGYD 310
              +A +GPV  A++A  ++Q+Y GG+    C  S  N+NHAV +VGY 
Sbjct: 121 KAALANYGPVSVAIDASSSFQFYKGGIYSGPC-CSNTNLNHAVLLVGYG 168


Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to hatch or to evade the host immune system. Mammalian CPs are primarily lysosomal enzymes with the exception of cathepsin W, which is retained in the endoplasmic reticulum. They are responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. In addition to its inhibitory role, the propeptide is required for proper folding of the newly synthesized enzyme and its stabilization in denaturing pH conditions. Residues within the propeptide region also play a role in the transport of the proenzyme to lysosomes or acidified vesicles. Also included in this subfamily are proteins classified as non-peptidase homologs, which lack peptidase activity or have missing active site residues. Length = 210

>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 317
KOG1542|consensus372 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543|consensus325 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364 548 dipeptidyl-peptidase I precursor; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544|consensus470 99.97
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.71
COG4870372 Cysteine protease [Posttranslational modification, 99.67
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.55
cd00585 437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.36
PF03051 438 Peptidase_C1_2: Peptidase C1-like family This fami 97.56
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 95.64
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 93.91
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 92.09
KOG4128|consensus 457 87.28
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 86.99
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 86.65
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 81.64
>KOG1542|consensus Back     alignment and domain information
Probab=100.00  E-value=1.8e-70  Score=487.16  Aligned_cols=260  Identities=35%  Similarity=0.588  Sum_probs=227.0

Q ss_pred             HHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhccccc-ccccc
Q psy12185         33 KLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVN-KHVLM  110 (317)
Q Consensus        33 ~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~-~~~~~  110 (317)
                      ....|..|+.+|+|+|.+. |...|+.||+.|+..+++++..  ...+..+|+|+|||||+|||+++++..... .+.+.
T Consensus        67 ~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~--d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~~  144 (372)
T KOG1542|consen   67 LEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQEN--DPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLPG  144 (372)
T ss_pred             hHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhc--CccccccCccchhhcCHHHHHHHhhccccccccCcc
Confidence            4789999999999999998 9999999999999999998852  445899999999999999998765532211 00111


Q ss_pred             cCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHH
Q psy12185        111 SHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEV  190 (317)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l  190 (317)
                      ..               ......+...||++||||++|+||||||||.||||||||+++++|++++|++|++++||||||
T Consensus       145 ~~---------------~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeL  209 (372)
T KOG1542|consen  145 DA---------------AEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQEL  209 (372)
T ss_pred             cc---------------ccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhh
Confidence            00               000123456899999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCC-cccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhC
Q psy12185        191 IDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDA-ACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATH  269 (317)
Q Consensus       191 ~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~-~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~  269 (317)
                      +||+. .++||+||.+..||+|+++. .||..|.+|||++..+ .|..++.. ..+.|++|..+.  .||++|...|+++
T Consensus       210 vDCD~-~d~gC~GGl~~nA~~~~~~~-gGL~~E~dYPY~g~~~~~C~~~~~~-~~v~I~~f~~l~--~nE~~ia~wLv~~  284 (372)
T KOG1542|consen  210 VDCDS-CDNGCNGGLMDNAFKYIKKA-GGLEKEKDYPYTGKKGNQCHFDKSK-IVVSIKDFSMLS--NNEDQIAAWLVTF  284 (372)
T ss_pred             hcccC-cCCcCCCCChhHHHHHHHHh-CCccccccCCccccCCCccccchhh-ceEEEeccEecC--CCHHHHHHHHHhc
Confidence            99998 89999999999999997664 8999999999999988 89998877 889999998765  6999999999999


Q ss_pred             CCeEEEEecccccccCCCeEeC---CCCCCCCCCCeEEEEEEeecCC---Cee
Q psy12185        270 GPVIAAVNALTWQYYLGGVIQY---NCDGSLANINHAVQIVGYDNYS---RTW  316 (317)
Q Consensus       270 gPv~v~i~~~~f~~Y~~GIy~~---~c~~~~~~~~Hav~iVGyg~~~---~~W  316 (317)
                      |||+|+|++..+|+|.+||+.+   .|.+..  +||||+|||||.++   .||
T Consensus       285 GPi~vgiNa~~mQ~YrgGV~~P~~~~Cs~~~--~~HaVLlvGyG~~g~~~PYW  335 (372)
T KOG1542|consen  285 GPLSVGINAKPMQFYRGGVSCPSKYICSPKL--LNHAVLLVGYGSSGYEKPYW  335 (372)
T ss_pred             CCeEEEEchHHHHHhcccccCCCcccCCccc--cCceEEEEeecCCCCCCceE
Confidence            9999999999999999999998   698876  89999999999876   477



>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
1pci_A322 Procaricain Length = 322 6e-22
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 3e-21
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-19
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-19
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-19
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 4e-19
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 4e-19
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 4e-19
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 5e-19
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 5e-19
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 5e-19
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 5e-19
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 7e-19
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 2e-18
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-18
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 3e-18
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 5e-18
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 5e-18
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 6e-18
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 6e-18
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 7e-18
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 7e-18
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 7e-18
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 8e-18
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 9e-18
3of8_A221 Structural Basis For Reversible And Irreversible In 9e-18
3h89_A220 A Combined Crystallographic And Molecular Dynamics 9e-18
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 1e-17
1ppo_A216 Determination Of The Structure Of Papaya Protease O 1e-17
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-17
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 2e-17
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-17
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 2e-17
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 3e-17
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 3e-17
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 4e-17
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 4e-17
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 6e-17
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 6e-17
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 7e-17
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 8e-17
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 9e-17
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 1e-16
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-16
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-16
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 1e-16
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 1e-16
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 1e-16
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 3e-16
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 4e-16
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 4e-16
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 5e-16
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 8e-16
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 1e-15
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-15
2vhs_A217 Cathsilicatein, A Chimera Length = 217 3e-15
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 3e-15
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 6e-15
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 9e-15
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 1e-14
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-14
2act_A220 Crystallographic Refinement Of The Structure Of Act 1e-14
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 3e-14
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 3e-14
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 4e-14
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 4e-14
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 7e-14
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-13
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 2e-13
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 2e-13
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 3e-13
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 5e-13
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 6e-13
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 1e-12
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 2e-12
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 3e-12
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 3e-12
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 5e-12
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 8e-12
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 1e-11
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 2e-11
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 1e-10
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-08
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 3e-07
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 3e-06
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 4e-06
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 4e-06
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 5e-06
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-05
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-05
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 4e-05
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 9e-05
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 1e-04
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 1e-04
1mir_A322 Rat Procathepsin B Length = 322 2e-04
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure

Iteration: 1

Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 29/277 (10%) Query: 31 EQKLELFSSFQQRYKKSYSKSEHDI-RFKNFEKSLDIIEELNKNRQSPESARYGITEFSD 89 E+ ++LF+S+ + K Y + + RF+ F+ +L+ I+E NK S G+ EF+D Sbjct: 16 ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNS---YWLGLNEFAD 72 Query: 90 LSEEEFKTRHLRHSVNXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXVKKDWREAGI 149 LS +EF +++ ++ + DWR+ G Sbjct: 73 LSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENV--------------DWRKKGA 118 Query: 150 IGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNGNMGCSGGDFCAL 209 + VR+Q +CG+CWAFS V T E ++ ++ G L LS QE++DC + GC GG Sbjct: 119 VTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCE-RRSHGCKGGYPPYA 177 Query: 210 LDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATH 269 L+++ N + L S+YP K C+ K G +K+ + P+ L + Sbjct: 178 LEYVAKNGIHL--RSKYPYKAKQGTCRAKQVG--GPIVKTSGVGRVQPNNEGNLLNAIAK 233 Query: 270 GPVIAAVNA--LTWQYYLGGVIQYNC----DGSLANI 300 PV V + +Q Y GG+ + C DG++ + Sbjct: 234 QPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAV 270
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-65
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 2e-62
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 5e-62
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 7e-62
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 2e-61
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 2e-60
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 3e-60
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 7e-59
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-45
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 7e-45
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 5e-44
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-42
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 2e-42
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 2e-42
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 2e-42
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 2e-42
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 2e-42
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 3e-42
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 3e-42
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 3e-42
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 4e-42
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 4e-42
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 5e-42
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 6e-42
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 9e-42
1cqd_A221 Protein (protease II); cysteine protease, glycopro 2e-41
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 4e-41
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-40
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 2e-40
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 3e-40
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 6e-40
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 4e-39
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 4e-37
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 1e-33
3u8e_A222 Papain-like cysteine protease; papain-like cystein 2e-32
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 1e-31
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 1e-31
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 4e-31
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 2e-30
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 2e-14
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 4e-14
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 1e-04
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
 Score =  207 bits (530), Expect = 1e-65
 Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 37/285 (12%)

Query: 35  ELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELN-KNRQSPESARYGITEFSDLSEE 93
           +L+  +++ Y K Y+ ++   R   +EK++  I+E N ++     +   G+ +F+D++ E
Sbjct: 3   DLWHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFE 62

Query: 94  EFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKV 153
           EFK ++L        ++SH   ++ ++                 +P K DWRE+G + +V
Sbjct: 63  EFKAKYLTEMSRASDILSHGVPYEANN---------------RAVPDKIDWRESGYVTEV 107

Query: 154 RNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGN-GNMGCSGGDFCALLDW 212
           ++Q  CG+ WAFST  T E  +     T    S Q+++DC+   GN GC GG        
Sbjct: 108 KDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGG-------L 160

Query: 213 MD-----VNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPS--ESSILTD 265
           M+     + +  LE ES YP    +  C+         K+  +     + S  E  +   
Sbjct: 161 MENAYQYLKQFGLETESSYPYTAVEGQCRYNK-QLGVAKVTGF---YTVHSGSEVELKNL 216

Query: 266 IATHGPVIAAVNAL-TWQYYLGGVIQYNCDGSLANINHAVQIVGY 309
           +   GP   AV+    +  Y  G+   +   S   +NHAV  VGY
Sbjct: 217 VGAEGPAAVAVDVESDFMMYRSGIY-QSQTCSPLRVNHAVLAVGY 260


>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
2cb5_A 453 Protein (bleomycin hydrolase); aminopeptidase, cys 99.97
2e01_A 457 Cysteine proteinase 1; bleomycin hydrolase, thiol 99.96
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.89
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.75
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.71
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 96.44
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 95.8
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 95.79
3erv_A236 Putative C39-like peptidase; structural genomics, 80.2
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=6.1e-69  Score=499.65  Aligned_cols=262  Identities=29%  Similarity=0.486  Sum_probs=218.4

Q ss_pred             chHHHHHHHHHHHHHhCCccCch-hHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEecCcCCCCCHHHHHHhhhccccccc
Q psy12185         29 NLEQKLELFSSFQQRYKKSYSKS-EHDIRFKNFEKSLDIIEELNKNRQSPESARYGITEFSDLSEEEFKTRHLRHSVNKH  107 (317)
Q Consensus        29 ~~~~~~~~f~~~~~~~~K~Y~~~-E~~~R~~iF~~n~~~I~~~N~~~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~  107 (317)
                      +++++..+|++|+.+|+|+|.+. |+.+|++||++|+++|++||+   .+.+|++|+|+|+|||.|||+++++..... .
T Consensus        58 s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~---~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~-~  133 (363)
T 3tnx_A           58 STERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK---KNNSYWLGLNVFADMSNDEFKEKYTGSIAG-N  133 (363)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEECSCTTTTSCHHHHHHHHSCSSCS-C
T ss_pred             CHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc---CCCCeEEeccccccCCHHHHHHHhcccccc-c
Confidence            44678999999999999999998 999999999999999999994   567999999999999999997665432211 0


Q ss_pred             ccccCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCH
Q psy12185        108 VLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSV  187 (317)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~  187 (317)
                      ....   .......         ......+||++||||++|+||||||||.||||||||++++||++++|+++..+.||+
T Consensus       134 ~~~~---~~~~~~~---------~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSe  201 (363)
T 3tnx_A          134 YTTT---ELSYEEV---------LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSE  201 (363)
T ss_dssp             CCCS---SSSSSCC---------CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCH
T ss_pred             cccc---ccccccc---------cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCH
Confidence            0000   0000000         012245799999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHH
Q psy12185        188 QEVIDCAGNGNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIA  267 (317)
Q Consensus       188 q~l~dC~~~~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~  267 (317)
                      |+|+||+. .+.||+||++..||+|+.+  .||++|++|||.+.++.|..........++.+|..+. ..++..++.+|+
T Consensus       202 Q~LvdC~~-~~~GC~GG~~~~a~~yi~~--~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~e~~l~~~v~  277 (363)
T 3tnx_A          202 QELLDCDR-RSYGCNGGYPWSALQLVAQ--YGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQ-PYNEGALLYSIA  277 (363)
T ss_dssp             HHHHHHCT-TSCTTBCCCHHHHHHHHHH--TCBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEEC-SSCHHHHHHHHT
T ss_pred             HHHhcccC-CCCCCCCCChHHHHhHHHh--cCccccccCCCcCcCCCcccCCCCCceeeccceEEcc-hhhHHHHHHHHH
Confidence            99999998 7889999999999999987  6999999999999998887644432456777777665 567888888886


Q ss_pred             hCCCeEEEEec--ccccccCCCeEeCCCCCCCCCCCeEEEEEEeecCCCee
Q psy12185        268 THGPVIAAVNA--LTWQYYLGGVIQYNCDGSLANINHAVQIVGYDNYSRTW  316 (317)
Q Consensus       268 ~~gPv~v~i~~--~~f~~Y~~GIy~~~c~~~~~~~~Hav~iVGyg~~~~~W  316 (317)
                       +|||+|+|++  ++|++|++|||...|+..   +||||+|||||+  +||
T Consensus       278 -~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~---lnHaV~iVGyG~--~YW  322 (363)
T 3tnx_A          278 -NQPVSVVLEAAGKDFQLYRGGIFVGPCGNK---VDHAVAAVGYGP--NYI  322 (363)
T ss_dssp             -TSCEEEEECCCSHHHHTEEEEEECCCCCSC---CCEEEEEEEEET--TEE
T ss_pred             -cCCcEEEEEecchhhhCCCCCEECCCCCCC---CCeEEEEEEcCC--CcE
Confidence             5999999998  689999999999888754   799999999997  477



>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 317
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-33
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 5e-31
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 9e-26
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-25
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 3e-24
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 5e-24
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-23
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 4e-23
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 4e-23
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 6e-23
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 2e-22
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 2e-22
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 4e-22
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 1e-21
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-21
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-21
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 4e-21
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 2e-20
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 1e-19
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 1e-15
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  123 bits (309), Expect = 1e-33
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 24/279 (8%)

Query: 35  ELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKN-RQSPESARYGITEFSDLSEE 93
             ++ ++  + + Y  +E   R   +EK++ +IE  N+  R+   S    +  F D++ E
Sbjct: 10  AQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSE 69

Query: 94  EFKTRHLRHSVNKHVLMSHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKV 153
           EF+              +  ++       V +  +          P   DWRE G +  V
Sbjct: 70  EFRQVM-----------NGFQNRKPRKGKVFQEPLFYEA------PRSVDWREKGYVTPV 112

Query: 154 RNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEVIDCAGNG-NMGCSGGDFCALLDW 212
           +NQ  CG+CWAFS     E     K G L  LS Q ++DC+G   N GC+GG       +
Sbjct: 113 KNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY 172

Query: 213 MDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATHGPV 272
           +  N  + + E  YP    +A  +    +P            +   E +++  +AT GP+
Sbjct: 173 VQDNGGL-DSEESYP---YEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPI 228

Query: 273 IAAVNALTWQ-YYLGGVIQYNCDGSLANINHAVQIVGYD 310
             A++A      +    I +  D S  +++H V +VGY 
Sbjct: 229 SVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG 267


>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 98.58
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 97.76
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 93.98
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 89.88
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=7e-63  Score=453.60  Aligned_cols=258  Identities=27%  Similarity=0.478  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHHHhCCccCchhHHHHHHHHHHHHHHHHHHhhc-CCCCCCeEEecCcCCCCCHHHHHHhhhcccccccccc
Q psy12185         32 QKLELFSSFQQRYKKSYSKSEHDIRFKNFEKSLDIIEELNKN-RQSPESARYGITEFSDLSEEEFKTRHLRHSVNKHVLM  110 (317)
Q Consensus        32 ~~~~~f~~~~~~~~K~Y~~~E~~~R~~iF~~n~~~I~~~N~~-~~~~~~~~~g~N~fsD~t~eEf~~~~~~~~~~~~~~~  110 (317)
                      .+..+|++||++|+|+|.+.|+.+|++||.+|+++|++||++ ..++.+|+||+|+|+|||.|||.+.++.....    .
T Consensus         7 ~l~~~F~~f~~~~~K~Y~~~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~----~   82 (316)
T d1cs8a_           7 SLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNR----K   82 (316)
T ss_dssp             GGHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCC----C
T ss_pred             HHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccc----c
Confidence            467889999999999997778899999999999999999986 34678999999999999999997654322111    0


Q ss_pred             cCCCCCCCCCccccccccccCCCCCCCCCceeecccCCCCCCCcCCCCCccHHHHHHHHHHHHHHHHHcCCCccCCHHHH
Q psy12185        111 SHHKHHDHHHNHVKKRSITTGITIPTGIPVKKDWREAGIIGKVRNQQTCGACWAFSTVETAESMHALKNGTLSLLSVQEV  190 (317)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~DwR~~g~v~~v~dQg~CGsCwAfa~~~~le~~~~i~~~~~~~lS~q~l  190 (317)
                      . ......            ..+...+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|
T Consensus        83 ~-~~~~~~------------~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~l  149 (316)
T d1cs8a_          83 P-RKGKVF------------QEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNL  149 (316)
T ss_dssp             C-SCCEEC------------CCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHH
T ss_pred             c-ccCccc------------cCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhh
Confidence            0 000000            012346899999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC-CCCCCCCCchHHHHHHHHHhCCCCCCCCCCccccCCCcccCCCCCCCceEEeeeEEecCCCcHHHHHHHHHhC
Q psy12185        191 IDCAGN-GNMGCSGGDFCALLDWMDVNKVVLEPESEYPLLLKDAACKRKATSPNGVKIKSYTCDTLIPSESSILTDIATH  269 (317)
Q Consensus       191 ~dC~~~-~~~gC~GG~~~~a~~y~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~~~~~~~~~~i~~al~~~  269 (317)
                      +||+.. ++.||.||++..|++|+..+ +++..|.+|||.+....|...... ....+..+...  ..++..|+++|+.+
T Consensus       150 vdC~~~~~~~~c~gg~~~~a~~y~~~~-g~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~l~~~  225 (316)
T d1cs8a_         150 VDCSGPQGNEGCNGGLMDYAFQYVQDN-GGLDSEESYPYEATEESCKYNPKY-SVANDAGFVDI--PKQEKALMKAVATV  225 (316)
T ss_dssp             HHHCGGGTCCGGGCBCHHHHHHHHHHH-TCEEBTTTSCCCSSCCCCCCCGGG-EEECCCCEEEC--CSCHHHHHHHHHHH
T ss_pred             hhccccccCCCCCCCchHHHHHHHHhc-Cccccccccccccccccccccccc-ccccccccccc--cCcHHHHHHHHHHh
Confidence            999863 57899999999999999885 568899999999988888766554 44555555543  46789999999999


Q ss_pred             CCeEEEEec--ccccccCCCeEeC-CCCCCCCCCCeEEEEEEeecC
Q psy12185        270 GPVIAAVNA--LTWQYYLGGVIQY-NCDGSLANINHAVQIVGYDNY  312 (317)
Q Consensus       270 gPv~v~i~~--~~f~~Y~~GIy~~-~c~~~~~~~~Hav~iVGyg~~  312 (317)
                      |||+|+|++  .+|++|++|||.. .|+...  +||||+|||||.+
T Consensus       226 gpv~v~i~~~~~~f~~y~~Gi~~~~~c~~~~--~nHaV~iVGyG~d  269 (316)
T d1cs8a_         226 GPISVAIDAGHESFLFYKEGIYFEPDCSSED--MDHGVLVVGYGFE  269 (316)
T ss_dssp             CCEEEEECCCSHHHHTEEEEEECCTTCCSSC--CCEEEEEEEEEEE
T ss_pred             CCeEEEEEeccchhccccCCcccCCCCCCCc--CCEEEEEEEEccc
Confidence            999999998  6899999999987 676654  8999999999954



>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure