Psyllid ID: psy1243

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MPAAIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTPPRQV
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEEEccHHHHccccccccccccccEEcccccccccccccccccEEEEEcccccccEEEEEEccccccEEEEcccccHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEEEEEEcHHHHHHHHHccccccccEEEEccccccccccccccccEEEEccEcEEEEEEccccccccccEEEEEHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mpaaiasssaSNALTLKAARVGtlsqescrkedaygtrikdsmfcagsfqggadscqgdsggpivcdiqgcdkgaslgtdRLSRACYVLSKMIRFYASVgieatsscspgdpltttpprqv
Flexible Loop (DISEMBL)
mpaaiasssasnaltlkaarvgtlsqescrKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIeatsscspgdpltttpprqv
Low Complexity Region (SEG)
MPaaiasssasnaltlkaaRVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTPPRQV
Disordered region (IsUnstruct)
*********************************AYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIE*******************
Disordered Region (DISOPRED)
**AAI*******ALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEA******************
Disordered Region (DISEMBL)
**********SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEATSSC**************
Disordered Region (DISPRO)
*******SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEATS****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPAAIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTPPRQV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
O35453	436	Serine protease hepsin OS	yes	N/A	0.462	0.128	0.553	5e-12
Q05511	416	Serine protease hepsin OS	yes	N/A	0.867	0.252	0.394	1e-11
Q14C59	416	Transmembrane protease se	no	N/A	0.487	0.141	0.457	6e-11
Q5R5E8	417	Serine protease hepsin OS	yes	N/A	0.438	0.127	0.547	8e-11
P05981	417	Serine protease hepsin OS	yes	N/A	0.438	0.127	0.547	9e-11
Q6IE14	420	Transmembrane protease se	no	N/A	0.487	0.140	0.457	9e-11
P35041	267	Trypsin-7 OS=Anopheles ga	yes	N/A	0.487	0.220	0.540	3e-10
Q3UQ41	389	Transmembrane protease se	no	N/A	0.413	0.128	0.52	4e-10
P00748	615	Coagulation factor XII OS	no	N/A	0.512	0.100	0.467	4e-10
P36376	259	Glandular kallikrein-12,	no	N/A	0.669	0.312	0.360	9e-10

>sp|O35453|HEPS_MOUSE Serine protease hepsin OS=Mus musculus GN=Hpn PE=2 SV=3

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 324 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 379

Plays an essential role in cell growth and maintenance of cell morphology.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 1EC: 0EC: 6

>sp|Q05511|HEPS_RAT Serine protease hepsin OS=Rattus norvegicus GN=Hpn PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 9/114 (7%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQ 69
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGG  VC+  I 
Sbjct: 304 QAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGHFVCEDRIS 363

Query: 70  GCDKG-----ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
           G  +       S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct: 364 GTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 416

Plays an essential role in cell growth and maintenance of cell morphology.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 6

>sp|Q14C59|TM11L_MOUSE Transmembrane protease serine 11B-like protein OS=Mus musculus GN=Tmprss11bnl PE=2 SV=2

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           S +  + L L+ A +  +   +C  E+AYG RI D+M CAG  +G  D+CQGDSGGP+V
Sbjct: 313 SYNGKSPLLLQKASIKIIDTNTCNSEEAYGGRIVDTMLCAGYLEGSIDACQGDSGGPLV 371

Probable serine protease.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|Q5R5E8|HEPS_PONAB Serine protease hepsin OS=Pongo abelii GN=HPN PE=2 SV=1

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            L+ ARV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 308 VLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 360

Plays an essential role in cell growth and maintenance of cell morphology.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 6

>sp|P05981|HEPS_HUMAN Serine protease hepsin OS=Homo sapiens GN=HPN PE=1 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            L+ ARV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 308 VLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 360

Plays an essential role in cell growth and maintenance of cell morphology.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 1

EC: 0

EC: 6

>sp|Q6IE14|TM11L_RAT Transmembrane protease serine 11B-like protein OS=Rattus norvegicus GN=Tmprss11bnl PE=2 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           S +  + L L+ A +  +   +C  E+AYG RI D+M CAG  +G  D+CQGDSGGP+V
Sbjct: 317 SYNGKSPLLLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYMEGYVDACQGDSGGPLV 375

Probable serine protease.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P35041|TRY7_ANOGA Trypsin-7 OS=Anopheles gambiae GN=TRYP7 PE=2 SV=2

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           S++ SNA+ L+AA V T+ QE CR+  ++   I D M CAG  QGG D+CQGDSGGP+V 
Sbjct: 171 SATESNAI-LRAANVPTVDQEECREAYSHDA-ITDRMLCAGYQQGGKDACQGDSGGPLVA 228

Query: 67  D 67
           D
Sbjct: 229 D 229

Constitutive trypsin that is expressed 2 days after emergence, coinciding with host seeking behavior of the female.

Anopheles gambiae (taxid: 7165)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 4

>sp|Q3UQ41|TM11A_MOUSE Transmembrane protease serine 11A OS=Mus musculus GN=Tmprss11a PE=2 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 16  LKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           L+ ARV  +S + C+K   YG  IK  MFCAG  +G  D+C+GDSGGP+V
Sbjct: 295 LREARVQIISNDICKKRHVYGNEIKRGMFCAGFLEGNYDACRGDSGGPLV 344

Probable serine protease which may play a role in cellular senescence. Overexpression inhibits cell growth and induce G1 cell cycle arrest.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P00748|FA12_HUMAN Coagulation factor XII OS=Homo sapiens GN=F12 PE=1 SV=3

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 40/62 (64%)

Query: 16  LKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGA 75
           L+ A+V  LS E C   D +G+ I   M CAG  +GG D+CQGDSGGP+VC+ Q  ++  
Sbjct: 519 LQEAQVPFLSLERCSAPDVHGSSILPGMLCAGFLEGGTDACQGDSGGPLVCEDQAAERRL 578

Query: 76  SL 77
           +L
Sbjct: 579 TL 580

Factor XII is a serum glycoprotein that participates in the initiation of blood coagulation, fibrinolysis, and the generation of bradykinin and angiotensin. Prekallikrein is cleaved by factor XII to form kallikrein, which then cleaves factor XII first to alpha-factor XIIa and then trypsin cleaves it to beta-factor XIIa. Alpha-factor XIIa activates factor XI to factor XIa.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 3

EC: 8

>sp|P36376|KLK12_RAT Glandular kallikrein-12, submandibular/renal OS=Rattus norvegicus GN=Klk12 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 16  LKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK 73
           L+   +  LS E C K  A+   + D M CAG  +GG D+C GDSGGP++CD  +QG   
Sbjct: 169 LQCVNINILSNEKCIK--AHTQMVTDVMLCAGELEGGKDTCNGDSGGPLLCDGVLQGITS 226

Query: 74  GASLGTDRLSRACYVLSKMIRFYASV 99
            +S+     +R   + +K+I+F + +
Sbjct: 227 WSSVPCGETNRPA-IYTKLIKFTSWI 251

Glandular kallikreins cleave Met-Lys and Arg-Ser bonds in kininogen to release Lys-bradykinin.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 3

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
149056233	325	hepsin, isoform CRA_a [Rattus norvegicus	0.867	0.323	0.403	4e-11
148692006	306	hepsin, isoform CRA_b [Mus musculus]	0.462	0.183	0.553	1e-10
2606037	416	hepsin [Mus musculus]	0.462	0.134	0.553	2e-10
159110508	416	serine protease hepsin isoform 2 precurs	0.462	0.134	0.553	2e-10
443287649	445	serine protease hepsin isoform 3 precurs	0.462	0.125	0.553	2e-10
74224366	445	unnamed protein product [Mus musculus]	0.462	0.125	0.553	2e-10
159110512	436	serine protease hepsin isoform 1 precurs	0.462	0.128	0.553	2e-10
26362705	435	unnamed protein product [Mus musculus]	0.462	0.128	0.553	2e-10
317419417	473	Hyaluronan-binding protein 2, partial [D	0.429	0.109	0.596	2e-10
260830910	239	hypothetical protein BRAFLDRAFT_209243 [	0.545	0.276	0.485	3e-10

>gi|149056233|gb|EDM07664.1| hepsin, isoform CRA_a [Rattus norvegicus] gi|149056234|gb|EDM07665.1| hepsin, isoform CRA_a [Rattus norvegicus]

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 9/114 (7%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQ 69
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+  I 
Sbjct: 213 QAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRIS 272

Query: 70  GCDKG-----ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
           G  +       S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct: 273 GTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 325

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148692006|gb|EDL23953.1| hepsin, isoform CRA_b [Mus musculus]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 194 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 249

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|2606037|gb|AAB84221.1| hepsin [Mus musculus]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 304 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 359

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|159110508|ref|NP_032307.2| serine protease hepsin isoform 2 precursor [Mus musculus] gi|148692007|gb|EDL23954.1| hepsin, isoform CRA_c [Mus musculus]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 304 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 359

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443287649|ref|NP_001263198.1| serine protease hepsin isoform 3 precursor [Mus musculus]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 333 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 388

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|74224366|dbj|BAE33755.1| unnamed protein product [Mus musculus]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 333 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 388

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|159110512|ref|NP_001103722.1| serine protease hepsin isoform 1 precursor [Mus musculus] gi|341941076|sp|O35453.3|HEPS_MOUSE RecName: Full=Serine protease hepsin; Contains: RecName: Full=Serine protease hepsin non-catalytic chain; Contains: RecName: Full=Serine protease hepsin catalytic chain gi|148692005|gb|EDL23952.1| hepsin, isoform CRA_a [Mus musculus] gi|187953015|gb|AAI38810.1| Hepsin [Mus musculus] gi|219519395|gb|AAI45414.1| Hepsin [Mus musculus]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 324 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 379

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|26362705|dbj|BAB22289.2| unnamed protein product [Mus musculus]

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%)

Query: 12  NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            A+ L+ ARV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 323 QAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 378

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|317419417|emb|CBN81454.1| Hyaluronan-binding protein 2, partial [Dicentrarchus labrax]

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/52 (59%), Positives = 38/52 (73%)

Query: 19  ARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ARV  +SQE C+    YG  + DSMFCAG+ +GG DSCQGDSGGP+VC+  G
Sbjct: 383 ARVLLISQEKCKAPHVYGNSLDDSMFCAGNMKGGVDSCQGDSGGPLVCERNG 434

Source: Dicentrarchus labrax

Species: Dicentrarchus labrax

Genus: Dicentrarchus

Family: Moronidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260830910|ref|XP_002610403.1| hypothetical protein BRAFLDRAFT_209243 [Branchiostoma floridae] gi|229295768|gb|EEN66413.1| hypothetical protein BRAFLDRAFT_209243 [Branchiostoma floridae]

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 3   AAIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGG 62
           A   S     + TL+ ARV  +S+E+CR+   YG +  D+MFCAG   GG DSCQGDSGG
Sbjct: 134 AGWGSDGHGYSATLRQARVPLISRETCRRR--YGWKFLDNMFCAGVMAGGVDSCQGDSGG 191

Query: 63  PIVCDIQG 70
           P++C+  G
Sbjct: 192 PLMCEQDG 199

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
UNIPROTKB|F1LS97	416	Hpn "Serine protease hepsin" [	0.801	0.233	0.415	1.1e-11
UNIPROTKB|F1LY39	435	Hpn "Serine protease hepsin" [	0.801	0.222	0.415	1.2e-11
UNIPROTKB|F1LY41	436	Hpn "Serine protease hepsin" [	0.801	0.222	0.415	1.2e-11
MGI|MGI:1196620	436	Hpn "hepsin" [Mus musculus (ta	0.801	0.222	0.405	4.2e-11
UNIPROTKB|I3L6R5	186	HPN "Uncharacterized protein"	0.396	0.258	0.562	5.8e-11
RGD|61982	416	Hpn "hepsin" [Rattus norvegicu	0.801	0.233	0.405	1e-10
UNIPROTKB|G1NYX6	417	HPN "Uncharacterized protein"	0.396	0.115	0.562	1.7e-10
UNIPROTKB|G1U4B0	430	HPN "Uncharacterized protein"	0.396	0.111	0.583	1.8e-10
RGD|735032	188	Klk1c3 "kallikrein 1-related p	0.570	0.367	0.405	2.5e-10
UNIPROTKB|B7Z1L4	393	HPN "cDNA FLJ57261, highly sim	0.396	0.122	0.562	3.2e-10

UNIPROTKB|F1LS97 Hpn "Serine protease hepsin" [Rattus norvegicus (taxid:10116)]

 Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 44/106 (41%), Positives = 57/106 (53%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK---- 73
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+  I G  +    
Sbjct:   312 RVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRISGTSRWRLC 371

Query:    74 G-ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
             G  S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct:   372 GIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 416

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

UNIPROTKB|F1LY39 Hpn "Serine protease hepsin" [Rattus norvegicus (taxid:10116)]

 Score = 166 (63.5 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 44/106 (41%), Positives = 57/106 (53%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK---- 73
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+  I G  +    
Sbjct:   331 RVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRISGTSRWRLC 390

Query:    74 G-ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
             G  S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct:   391 GIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 435

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

UNIPROTKB|F1LY41 Hpn "Serine protease hepsin" [Rattus norvegicus (taxid:10116)]

 Score = 166 (63.5 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 44/106 (41%), Positives = 57/106 (53%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK---- 73
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+  I G  +    
Sbjct:   332 RVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDRISGTSRWRLC 391

Query:    74 G-ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
             G  S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct:   392 GIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 436

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

MGI|MGI:1196620 Hpn "hepsin" [Mus musculus (taxid:10090)]

 Score = 161 (61.7 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 43/106 (40%), Positives = 56/106 (52%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK---- 73
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+  I G  +    
Sbjct:   332 RVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISGTSRWRLC 391

Query:    74 G-ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
             G  S GT   L+R   V +K+  F   +  +A  + S    + T P
Sbjct:   392 GIVSWGTGCALARKPGVYTKVTDFREWI-FKAIKTHSEASGMVTQP 436

GO:0003824 "catalytic activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=ISO

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0005911 "cell-cell junction" evidence=IMP

GO:0006508 "proteolysis" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0008233 "peptidase activity" evidence=ISO

GO:0008236 "serine-type peptidase activity" evidence=ISO

GO:0008360 "regulation of cell shape" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0010719 "negative regulation of epithelial to mesenchymal transition" evidence=ISO

GO:0010756 "positive regulation of plasminogen activation" evidence=ISO

GO:0015269 "calcium-activated potassium channel activity" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=ISO

GO:0034769 "basement membrane disassembly" evidence=ISO

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043923 "positive regulation by host of viral transcription" evidence=ISO

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=ISO

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IMP

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IMP

GO:0090103 "cochlea morphogenesis" evidence=IMP

GO:0097066 "response to thyroid hormone stimulus" evidence=IMP

GO:0097195 "pilomotor reflex" evidence=IMP

GO:2000347 "positive regulation of hepatocyte proliferation" evidence=ISO

GO:2000611 "positive regulation of thyroid hormone generation" evidence=IMP

UNIPROTKB|I3L6R5 HPN "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 27/48 (56%), Positives = 33/48 (68%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct:    82 RVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 129

GO:0043923 "positive regulation by host of viral transcription" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0034769 "basement membrane disassembly" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0015269 "calcium-activated potassium channel activity" evidence=IEA

GO:0010756 "positive regulation of plasminogen activation" evidence=IEA

GO:0010719 "negative regulation of epithelial to mesenchymal transition" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:2000611 "positive regulation of thyroid hormone generation" evidence=IEA

GO:2000347 "positive regulation of hepatocyte proliferation" evidence=IEA

GO:0097195 "pilomotor reflex" evidence=IEA

GO:0097066 "response to thyroid hormone stimulus" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0060429 "epithelium development" evidence=IEA

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=IEA

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=IEA

RGD|61982 Hpn "hepsin" [Rattus norvegicus (taxid:10116)]

 Score = 157 (60.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 43/106 (40%), Positives = 56/106 (52%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK---- 73
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGG  VC+  I G  +    
Sbjct:   312 RVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGHFVCEDRISGTSRWRLC 371

Query:    74 G-ASLGTD-RLSRACYVLSKMIRFYASVGIEATSSCSPGDPLTTTP 117
             G  S GT   L+R   V +K+I F   +  +A  + S    + T P
Sbjct:   372 GIVSWGTGCALARKPGVYTKVIDFREWI-FQAIKTHSEATGMVTQP 416

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;ISO

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO;ISS

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0005887 "integral to plasma membrane" evidence=ISO;ISS

GO:0005911 "cell-cell junction" evidence=ISO;ISS

GO:0006508 "proteolysis" evidence=ISO;ISS

GO:0008233 "peptidase activity" evidence=ISO

GO:0008236 "serine-type peptidase activity" evidence=ISO;ISS

GO:0008360 "regulation of cell shape" evidence=ISO;ISS

GO:0009986 "cell surface" evidence=ISO;ISS

GO:0010628 "positive regulation of gene expression" evidence=ISO;ISS

GO:0010719 "negative regulation of epithelial to mesenchymal transition" evidence=ISO;ISS

GO:0010756 "positive regulation of plasminogen activation" evidence=ISO;ISS

GO:0015269 "calcium-activated potassium channel activity" evidence=ISO;ISS

GO:0016021 "integral to membrane" evidence=ISO

GO:0030307 "positive regulation of cell growth" evidence=ISO;ISS

GO:0031965 "nuclear membrane" evidence=ISO;ISS

GO:0034769 "basement membrane disassembly" evidence=ISO;ISS

GO:0043025 "neuronal cell body" evidence=ISO;ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0043923 "positive regulation by host of viral transcription" evidence=ISO;ISS

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=ISO;ISS

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=ISO;ISS

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=ISO;ISS

GO:0090103 "cochlea morphogenesis" evidence=ISO;ISS

GO:0097066 "response to thyroid hormone stimulus" evidence=ISO;ISS

GO:0097195 "pilomotor reflex" evidence=ISO;ISS

GO:2000347 "positive regulation of hepatocyte proliferation" evidence=ISO;ISS

GO:2000611 "positive regulation of thyroid hormone generation" evidence=ISO;ISS

UNIPROTKB|G1NYX6 HPN "Uncharacterized protein" [Myotis lucifugus (taxid:59463)]

 Score = 155 (59.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 27/48 (56%), Positives = 33/48 (68%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct:   313 RVPIISNDVCNGPDFYGNQIKPKMFCAGYHEGGIDACQGDSGGPFVCE 360

GO:0005737 "cytoplasm" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008236 "serine-type peptidase activity" evidence=ISS

GO:0008360 "regulation of cell shape" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0010719 "negative regulation of epithelial to mesenchymal transition" evidence=ISS

GO:0010756 "positive regulation of plasminogen activation" evidence=ISS

GO:0015269 "calcium-activated potassium channel activity" evidence=ISS

GO:0030307 "positive regulation of cell growth" evidence=ISS

GO:0034769 "basement membrane disassembly" evidence=ISS

GO:0043025 "neuronal cell body" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043923 "positive regulation by host of viral transcription" evidence=ISS

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=ISS

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=ISS

GO:0071805 "potassium ion transmembrane transport" evidence=ISS

GO:0090103 "cochlea morphogenesis" evidence=ISS

GO:0097066 "response to thyroid hormone stimulus" evidence=ISS

GO:0097195 "pilomotor reflex" evidence=ISS

GO:2000347 "positive regulation of hepatocyte proliferation" evidence=ISS

GO:2000611 "positive regulation of thyroid hormone generation" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

UNIPROTKB|G1U4B0 HPN "Uncharacterized protein" [Oryctolagus cuniculus (taxid:9986)]

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 28/48 (58%), Positives = 33/48 (68%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             RV  +S E C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct:   326 RVPIISSEVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 373

GO:0005737 "cytoplasm" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008236 "serine-type peptidase activity" evidence=ISS

GO:0008360 "regulation of cell shape" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0010628 "positive regulation of gene expression" evidence=ISS

GO:0010719 "negative regulation of epithelial to mesenchymal transition" evidence=ISS

GO:0010756 "positive regulation of plasminogen activation" evidence=ISS

GO:0015269 "calcium-activated potassium channel activity" evidence=ISS

GO:0030307 "positive regulation of cell growth" evidence=ISS

GO:0034769 "basement membrane disassembly" evidence=ISS

GO:0043025 "neuronal cell body" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

GO:0043923 "positive regulation by host of viral transcription" evidence=ISS

GO:0050680 "negative regulation of epithelial cell proliferation" evidence=ISS

GO:0050910 "detection of mechanical stimulus involved in sensory perception of sound" evidence=ISS

GO:0071805 "potassium ion transmembrane transport" evidence=ISS

GO:0090103 "cochlea morphogenesis" evidence=ISS

GO:0097066 "response to thyroid hormone stimulus" evidence=ISS

GO:0097195 "pilomotor reflex" evidence=ISS

GO:2000347 "positive regulation of hepatocyte proliferation" evidence=ISS

GO:2000611 "positive regulation of thyroid hormone generation" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

RGD|735032 Klk1c3 "kallikrein 1-related peptidase C3" [Rattus norvegicus (taxid:10116)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 30/74 (40%), Positives = 45/74 (60%)

Query:    24 LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDKGASLGTDR 81
             LS E C K  AY  ++ D M CAG  +GG D+C+GDSGGP++CD  +QG     S+    
Sbjct:   106 LSNEKCIK--AYKEKVTDLMLCAGELEGGKDTCRGDSGGPLICDGVLQGITSWGSVPCGE 163

Query:    82 LSRACYVLSKMIRF 95
              ++   + +K+I+F
Sbjct:   164 PNKPG-IYTKLIKF 176

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|B7Z1L4 HPN "cDNA FLJ57261, highly similar to Serine protease hepsin (EC 3.4.21.-)" [Homo sapiens (taxid:9606)]

 Score = 152 (58.6 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 27/48 (56%), Positives = 33/48 (68%)

Query:    20 RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct:   285 RVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 332

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070008 "serine-type exopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35041	TRY7_ANOGA	3, ., 4, ., 2, 1, ., 4	0.5409	0.4876	0.2209	yes	N/A
O35453	HEPS_MOUSE	3, ., 4, ., 2, 1, ., 1, 0, 6	0.5535	0.4628	0.1284	yes	N/A
Q5R5E8	HEPS_PONAB	3, ., 4, ., 2, 1, ., 1, 0, 6	0.5471	0.4380	0.1270	yes	N/A
P05981	HEPS_HUMAN	3, ., 4, ., 2, 1, ., 1, 0, 6	0.5471	0.4380	0.1270	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	121
cd00190	232	cd00190, Tryp_SPc, Trypsin-like serine protease; M	6e-18
smart00020	229	smart00020, Tryp_SPc, Trypsin-like serine protease	9e-18
pfam00089	218	pfam00089, Trypsin, Trypsin	5e-12

>gnl|CDD|238113 cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

 Score = 75.4 bits (186), Expect = 6e-18
 Identities = 27/65 (41%), Positives = 37/65 (56%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           S        L+   V  +S   C++  +YG  I D+M CAG  +GG D+CQGDSGGP+VC
Sbjct: 133 SEGGPLPDVLQEVNVPIVSNAECKRAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVC 192

Query: 67  DIQGC 71
           +  G 
Sbjct: 193 NDNGR 197

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues. Length = 232

>gnl|CDD|214473 smart00020, Tryp_SPc, Trypsin-like serine protease

 Score = 75.0 bits (185), Expect = 9e-18
 Identities = 27/63 (42%), Positives = 39/63 (61%)

Query: 5   IASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
            +  + S   TL+   V  +S  +CR+  + G  I D+M CAG  +GG D+CQGDSGGP+
Sbjct: 132 TSEGAGSLPDTLQEVNVPIVSNATCRRAYSGGGAITDNMLCAGGLEGGKDACQGDSGGPL 191

Query: 65  VCD 67
           VC+
Sbjct: 192 VCN 194

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues. Length = 229

>gnl|CDD|215708 pfam00089, Trypsin, Trypsin

 Score = 59.8 bits (145), Expect = 5e-12
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 4/53 (7%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           TL+   V  +S+E+CR   AYG  + D+M CAG+  GG D+CQGDSGGP+VC 
Sbjct: 137 TLQEVTVPVVSRETCRS--AYGGTVTDNMICAGA--GGKDACQGDSGGPLVCS 185

Length = 218

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
KOG3627|consensus	256		99.59
cd00190	232	Tryp_SPc Trypsin-like serine protease; Many of the	99.36
smart00020	229	Tryp_SPc Trypsin-like serine protease. Many of the	99.26
PF00089	220	Trypsin: Trypsin; InterPro: IPR001254 In the MEROP	99.06
COG5640	413	Secreted trypsin-like serine protease [Posttransla	99.02
PF03761	282	DUF316: Domain of unknown function (DUF316) ; Inte	86.67

>KOG3627|consensus

Probab=99.59  E-value=3.5e-15  Score=106.14  Aligned_cols=91  Identities=32%  Similarity=0.583  Sum_probs=76.4

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~--   87 (121)
                      ..+..||++.+++++...|+..+.....+.+.+|||+......++|+|||||||++....  .+...||++++.. |.  
T Consensus       157 ~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPLv~~~~~--~~~~~GivS~G~~~C~~~  234 (256)
T KOG3627|consen  157 PLPDTLQEVDVPIISNSECRRAYGGLGTITDTMLCAGGPEGGKDACQGDSGGPLVCEDNG--RWVLVGIVSWGSGGCGQP  234 (256)
T ss_pred             CCCceeEEEEEeEcChhHhcccccCccccCCCEEeeCccCCCCccccCCCCCeEEEeeCC--cEEEEEEEEecCCCCCCC
Confidence            568899999999999999999544332567779999965667789999999999999887  6778999999977 64  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          .|+++..|.+||...+
T Consensus       235 ~~P~vyt~V~~y~~WI~~~~  254 (256)
T KOG3627|consen  235 NYPGVYTRVSSYLDWIKENI  254 (256)
T ss_pred             CCCeEEeEhHHhHHHHHHHh
Confidence                8999999999998654

>cd00190 Tryp_SPc Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms

Probab=99.36  E-value=2e-12  Score=89.61  Aligned_cols=89  Identities=33%  Similarity=0.706  Sum_probs=72.9

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      ..+..|++..+.+++...|.+.+.....+.+.++|++......+.|.|||||||++...  ..+.+.||++++..|.   
T Consensus       137 ~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsGgpl~~~~~--~~~~lvGI~s~g~~c~~~~  214 (232)
T cd00190         137 PLPDVLQEVNVPIVSNAECKRAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVCNDN--GRGVLVGIVSWGSGCARPN  214 (232)
T ss_pred             CCCceeeEEEeeeECHHHhhhhccCcccCCCceEeeCCCCCCCccccCCCCCcEEEEeC--CEEEEEEEEehhhccCCCC
Confidence            45677999999999999999854332467899999985443678999999999999876  4567899999987554   


Q ss_pred             ---eeeeccccceecce
Q psy1243          88 ---VLSKMIRFYASVGI  101 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~  101 (121)
                         .|+++..|.+||..
T Consensus       215 ~~~~~t~v~~~~~WI~~  231 (232)
T cd00190         215 YPGVYTRVSSYLDWIQK  231 (232)
T ss_pred             CCCEEEEcHHhhHHhhc
Confidence               79999999999964

Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.

>smart00020 Tryp_SPc Trypsin-like serine protease

Probab=99.26  E-value=2.2e-11  Score=84.61  Aligned_cols=87  Identities=34%  Similarity=0.672  Sum_probs=71.5

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +.....++...+.+++.+.|...+.....+...++|++........|.||||+||++...   .+...|+++.+..|.  
T Consensus       137 ~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~---~~~l~Gi~s~g~~C~~~  213 (229)
T smart00020      137 GSLPDTLQEVNVPIVSNATCRRAYSGGGAITDNMLCAGGLEGGKDACQGDSGGPLVCNDG---RWVLVGIVSWGSGCARP  213 (229)
T ss_pred             CcCCCEeeEEEEEEeCHHHhhhhhccccccCCCcEeecCCCCCCcccCCCCCCeeEEECC---CEEEEEEEEECCCCCCC
Confidence            345668899999999999999854333357889999985444678999999999999876   678999999987554  


Q ss_pred             ----eeeeccccceec
Q psy1243          88 ----VLSKMIRFYASV   99 (121)
Q Consensus        88 ----wi~~v~~~~~wi   99 (121)
                          +|+++.+|.+||
T Consensus       214 ~~~~~~~~i~~~~~WI  229 (229)
T smart00020      214 GKPGVYTRVSSYLDWI  229 (229)
T ss_pred             CCCCEEEEeccccccC
Confidence                899999999998

Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.

>PF00089 Trypsin: Trypsin; InterPro: IPR001254 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.06  E-value=4.6e-10  Score=77.21  Aligned_cols=80  Identities=31%  Similarity=0.706  Sum_probs=66.2

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      ....++...+.+++.+.|+..  +...+.+.++|++.. ...+.|.|||||||++.+.     .+.|+.+.+..|.    
T Consensus       135 ~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~~~c~~~~-~~~~~~~g~sG~pl~~~~~-----~lvGI~s~~~~c~~~~~  206 (220)
T PF00089_consen  135 YSSNLQSVTVPVVSRKTCRSS--YNDNLTPNMICAGSS-GSGDACQGDSGGPLICNNN-----YLVGIVSFGENCGSPNY  206 (220)
T ss_dssp             BTSBEEEEEEEEEEHHHHHHH--TTTTSTTTEEEEETT-SSSBGGTTTTTSEEEETTE-----EEEEEEEEESSSSBTTS
T ss_pred             ccccccccccccccccccccc--ccccccccccccccc-cccccccccccccccccee-----eecceeeecCCCCCCCc
Confidence            456889999999999999984  444478899999853 5678999999999998776     6788887776663    


Q ss_pred             --eeeeccccceec
Q psy1243          88 --VLSKMIRFYASV   99 (121)
Q Consensus        88 --wi~~v~~~~~wi   99 (121)
                        +|+++..|.+||
T Consensus       207 ~~v~~~v~~~~~WI  220 (220)
T PF00089_consen  207 PGVYTRVSSYLDWI  220 (220)
T ss_dssp             EEEEEEGGGGHHHH
T ss_pred             CEEEEEHHHhhccC
Confidence              789999999997

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine proteases belong to the MEROPS peptidase family S1 (chymotrypsin family, clan PA(S))and to peptidase family S6 (Hap serine peptidases). The chymotrypsin family is almost totally confined to animals, although trypsin-like enzymes are found in actinomycetes of the genera Streptomyces and Saccharopolyspora, and in the fungus Fusarium oxysporum []. The enzymes are inherently secreted, being synthesised with a signal peptide that targets them to the secretory pathway. Animal enzymes are either secreted directly, packaged into vesicles for regulated secretion, or are retained in leukocyte granules []. The Hap family, 'Haemophilus adhesion and penetration', are proteins that play a role in the interaction with human epithelial cells. The serine protease activity is localized at the N-terminal domain, whereas the binding domain is in the C-terminal region. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1SPJ_A 1A5I_A 2ZGH_A 2ZKS_A 2ZGJ_A 2ZGC_A 2ODP_A 2I6Q_A 2I6S_A 2ODQ_A ....

>COG5640 Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones]

Probab=99.02  E-value=6.5e-10  Score=82.22  Aligned_cols=86  Identities=23%  Similarity=0.368  Sum_probs=67.0

Q ss_pred             cccceEEEeccChhhhcccccC----CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc-
Q psy1243          14 LTLKAARVGTLSQESCRKEDAY----GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY-   87 (121)
Q Consensus        14 ~~L~~~~l~~~~~~~C~~~~~~----~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~-   87 (121)
                      ..|+++.+..++...|...+..    .....-.-+|||  ...+++|+||||||++......  ..+.||+||+.. |. 
T Consensus       182 t~l~e~~v~fv~~stc~~~~g~an~~dg~~~lT~~cag--~~~~daCqGDSGGPi~~~g~~G--~vQ~GVvSwG~~~Cg~  257 (413)
T COG5640         182 TILHEVAVLFVPLSTCAQYKGCANASDGATGLTGFCAG--RPPKDACQGDSGGPIFHKGEEG--RVQRGVVSWGDGGCGG  257 (413)
T ss_pred             ceeeeeeeeeechHHhhhhccccccCCCCCCccceecC--CCCcccccCCCCCceEEeCCCc--cEEEeEEEecCCCCCC
Confidence            4789999999999999985421    111222239999  5558999999999999877553  468999999976 64 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       258 t~~~gVyT~vsny~~WI~a~~  278 (413)
T COG5640         258 TLIPGVYTNVSNYQDWIAAMT  278 (413)
T ss_pred             CCcceeEEehhHHHHHHHHHh
Confidence                 9999999999998766

>PF03761 DUF316: Domain of unknown function (DUF316) ; InterPro: IPR005514 This is a family of uncharacterised proteins from Caenorhabditis elegans

Probab=86.67  E-value=0.98  Score=32.60  Aligned_cols=47  Identities=26%  Similarity=0.447  Sum_probs=31.6

Q ss_pred             CCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c----ceeeecccccee
Q psy1243          50 QGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C----YVLSKMIRFYAS   98 (121)
Q Consensus        50 ~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~----~wi~~v~~~~~w   98 (121)
                      ......|.+|+||||+...++-+  ...|+..-+.+ +    .+|-++..|.+-
T Consensus       223 ~~~~~~~~~d~Gg~lv~~~~gr~--tlIGv~~~~~~~~~~~~~~f~~v~~~~~~  274 (282)
T PF03761_consen  223 CTKQYSCKGDRGGPLVKNINGRW--TLIGVGASGNYECNKNNSYFFNVSWYQDE  274 (282)
T ss_pred             ecccccCCCCccCeEEEEECCCE--EEEEEEccCCCcccccccEEEEHHHhhhh
Confidence            34467899999999999887654  45777444432 2    366666665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	121
1o5e_H	255	Dissecting And Designing Inhibitor Selectivity Dete		2e-10
1z8g_A	372	Crystal Structure Of The Extracellular Region Of Th		2e-10
3t2n_A	372	Human Hepsin Protease In Complex With The Fab Fragm		2e-10
2psx_A	227	Crystal Structure Of Human Kallikrein 5 In Complex		2e-09
1ton_A	235	Rat Submaxillary Gland Serine Protease, Tonin. Stru		7e-09
2d8w_A	223	Structure Of Hyper-Vil-Trypsin Length = 223		8e-09
1taw_A	223	Bovine Trypsin Complexed To Appi Length = 223		1e-08
1trn_A	224	Crystal Structure Of Human Trypsin 1: Unexpected Ph		1e-08
3veq_B	223	A Binary Complex Betwwen Bovine Pancreatic Trypsin		1e-08
1tab_E	223	Structure Of The Trypsin-Binding Domain Of Bowman-B		1e-08
2vnt_A	276	Urokinase-Type Plasminogen Activator Inhibitor Comp		1e-08
2fi4_E	223	Crystal Structure Of A Bpti Variant (Cys14->ser) In		1e-08
1y59_T	223	Dianhydrosugar-Based Benzamidine, Factor Xa Specifi		1e-08
1ejn_A	253	Urokinase Plasminogen Activator B-Chain Inhibitor C		1e-08
1fv9_A	245	Crystal Structure Of Human Microurokinase In Comple		1e-08
2ftm_A	224	Crystal Structure Of A Bpti Variant (Cys38->ser) In		1e-08
3otj_E	223	A Crystal Structure Of Trypsin Complexed With Bpti		1e-08
1owd_A	245	Substituted 2-naphthamidine Inhibitors Of Urokinase		1e-08
4fu7_A	246	Crystal Structure Of The Urokinase Length = 246		1e-08
3mwi_U	246	The Complex Crystal Structure Of Urokianse And 5-Ni		1e-08
1f0t_A	243	Bovine Trypsin Complexed With Rpr131247 Length = 24		1e-08
1w0z_U	247	Urokinase Type Plasminogen Activator Length = 247		1e-08
1gi8_B	245	A Novel Serine Protease Inhibition Motif Involving		1e-08
1zzz_A	237	Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes		1e-08
2nwn_A	253	New Pharmacophore For Serine Protease Inhibition Re		1e-08
1sc8_U	262	Urokinase Plasminogen Activator B-Chain-J435 Comple		1e-08
1owe_A	245	Substituted 2-Naphthamidine Inhibitors Of Urokinase		1e-08
1fxy_A	228	Coagulation Factor Xa-Trypsin Chimera Inhibited Wit		1e-08
3ig6_B	253	Low Molecular Weigth Human Urokinase Type Plasminog		1e-08
1a0j_A	223	Crystal Structure Of A Non-Psychrophilic Trypsin Fr		1e-08
1lmw_B	253	Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-A		1e-08
1gj7_B	253	Engineering Inhibitors Highly Selective For The S1		1e-08
3qk1_A	229	Crystal Structure Of Enterokinase-Like Trypsin Vari		1e-08
1g3b_A	228	Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Ba		1e-08
1tgs_Z	229	Three-Dimensional Structure Of The Complex Between		1e-08
2tbs_A	222	Cold-Adaption Of Enzymes: Structural Comparison Bet		1e-08
1ntp_A	223	Use Of The Neutron Diffraction HD EXCHANGE TECHNIQU		1e-08
2ra3_A	224	Human Cationic Trypsin Complexed With Bovine Pancre		2e-08
2o8u_A	253	Crystal Structure And Binding Epitopes Of Urokinase		2e-08
1oph_B	243	Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh		2e-08
1o5a_B	253	Dissecting And Designing Inhibitor Selectivity Dete		3e-08
1utj_A	242	Trypsin Specificity As Elucidated By Lie Calculatio		3e-08
2zps_A	222	Crystal Structure Of Anionic Trypsin Isoform 3 From		3e-08
1bzx_E	222	The Crystal Structure Of Anionic Salmon Trypsin In		3e-08
5ptp_A	223	Structure Of Hydrolase (Serine Proteinase) Length =		3e-08
2zpq_A	222	Crystal Structure Of Anionic Trypsin Isoform 1 From		3e-08
1hj8_A	222	1.00 Aa Trypsin From Atlantic Salmon Length = 222		3e-08
2eek_A	220	Crystal Structure Of Atlantic Cod Trypsin Complexed		3e-08
1bit_A	237	The Crystal Structure Of Anionic Salmon Trypsin In		3e-08
2zpr_A	222	Crystal Structure Of Anionic Trypsin Isoform 2 From		3e-08
1mbq_A	220	Anionic Trypsin From Pacific Chum Salmon Length = 2		3e-08
1h4w_A	224	Structure Of Human Trypsin Iv (Brain Trypsin) Lengt		6e-08
1anc_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Lys		7e-08
1sgf_G	237	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		8e-08
1mct_A	223	The Refined 1.6 Angstroms Resolution Crystal Struct		8e-08
1trm_A	223	The Three-Dimensional Structure Of Asn102 Mutant Of		9e-08
1anb_A	223	Anionic Trypsin Mutant With Ser 214 Replaced By Glu		9e-08
1slw_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		9e-08
1slx_B	223	Rat Anionic N143h, E151h Trypsin Complexed To A86h		9e-08
1ezs_C	223	Crystal Structure Of Ecotin Mutant M84r, W67a, G68a		9e-08
3tgi_E	223	Wild-Type Rat Anionic Trypsin Complexed With Bovine		9e-08
1co7_E	245	R117h Mutant Rat Anionic Trypsin Complexed With Bov		9e-08
1and_A	223	Anionic Trypsin Mutant With Arg 96 Replaced By His		9e-08
1ql9_A	223	Factor Xa Specific Inhibitor In Complex With Rat Tr		9e-08
1f7z_A	233	Rat Trypsinogen K15a Complexed With Bovine Pancreat		1e-07
1f5r_A	231	Rat Trypsinogen Mutant Complexed With Bovine Pancre		1e-07
1fy8_E	231	Crystal Structure Of The Deltaile16val17 Rat Anioni		1e-07
1dlk_B	230	Crystal Structure Analysis Of Delta-Chymotrypsin Bo		1e-07
4dg4_A	224	Human Mesotrypsin-S39y Complexed With Bovine Pancre		1e-07
2r9p_A	224	Human Mesotrypsin Complexed With Bovine Pancreatic		1e-07
3myw_A	223	The Bowman-Birk Type Inhibitor From Mung Bean In Te		1e-07
1ept_C	98	Refined 1.8 Angstroms Resolution Crystal Structure		1e-07
2cga_A	245	Bovine Chymotrypsinogen A. X-Ray Crystal Structure		1e-07
1mtn_C	97	Bovine Alpha-Chymotrypsin:bpti Crystallization Leng		1e-07
1afq_C	96	Crystal Structure Of Bovine Gamma-Chymotrypsin Comp		1e-07
1k9o_E	223	Crystal Structure Of Michaelis Serpin-Trypsin Compl		2e-07
3tgj_E	233	S195a Trypsinogen Complexed With Bovine Pancreatic		2e-07
2wpm_S	235	Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Le		3e-07
2wpi_S	235	Factor Ixa Superactive Double Mutant Length = 235		3e-07
2wph_S	235	Factor Ixa Superactive Triple Mutant Length = 235		3e-07
1rfn_A	235	Human Coagulation Factor Ixa In Complex With P-Amin		3e-07
1l2e_A	223	Human Kallikrein 6 (Hk6) Active Form With Benzamidi		3e-07
3tgk_E	231	Trypsinogen Mutant D194n And Deletion Of Ile 16-Val		3e-07
1xvm_A	224	Trypsin From Fusarium Oxysporum- Room Temperature T		3e-07
1gdu_A	224	Fusarium Oxysporum Trypsin At Atomic Resolution Len		3e-07
1tfx_A	223	Complex Of The Second Kunitz Domain Of Tissue Facto		3e-07
2a31_A	223	Trypsin In Complex With Borate Length = 223		3e-07
1an1_E	223	Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Len		3e-07
1gvl_A	223	Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M P		3e-07
4d8n_A	223	Human Kallikrein 6 Inhibitors With A Para-Amidobenz		4e-07
4an7_A	231	Kunitz Type Trypsin Inhibitor Complex With Porcine		4e-07
1dpo_A	223	Structure Of Rat Trypsin Length = 223		4e-07
1npm_A	225	Neuropsin, A Serine Protease Expressed In The Limbi		4e-07
1sgf_A	240	Crystal Structure Of 7s Ngf: A Complex Of Nerve Gro		4e-07
1ybw_A	283	Protease Domain Of Hgfa With No Inhibitor Length =		5e-07
1amh_A	223	Uncomplexed Rat Trypsin Mutant With Asp 189 Replace		5e-07
1hj9_A	223	Atomic Resolution Structures Of Trypsin Provide Ins		5e-07
1uhb_B	98	Crystal Structure Of Porcine Alpha Trypsin Bound Wi		5e-07
1v2j_T	223	Benzamidine In Complex With Bovine Trypsin Variant		5e-07
1v2q_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		5e-07
1v2u_T	223	Benzamidine In Complex With Bovine Trypsin Varinat		5e-07
1v2o_T	223	Trypsin Inhibitor In Complex With Bovine Trypsin Va		5e-07
2wub_A	257	Crystal Structure Of Hgfa In Complex With The Allos		6e-07
2r0l_A	248	Short Form Hgfa With Inhibitory Fab75 Length = 248		6e-07
1v2s_T	223	Benzamidine In Complex With Bovine Trypsin Variant		6e-07
3kcg_H	235	Crystal Structure Of The Antithrombin-Factor Ixa- P		6e-07
3uqv_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		6e-07
1spj_A	238	Structure Of Mature Human Tissue Kallikrein (Human		6e-07
1rjx_B	247	Human Plasminogen Catalytic Domain, K698m Mutant Le		7e-07
3uir_A	247	Crystal Structure Of The Plasmin-Textilinin-1 Compl		7e-07
1bui_B	250	Structure Of The Ternary Microplasmin-Staphylokinas		7e-07
1qrz_A	246	Catalytic Domain Of Plasminogen Length = 246		7e-07
1brb_E	223	Crystal Structures Of Rat Anionic Trypsin Complexed		7e-07
1ao5_A	237	Mouse Glandular Kallikrein-13 (Prorenin Converting		7e-07
1pfx_C	235	Porcine Factor Ixa Length = 235		8e-07
1ppz_A	224	Trypsin Complexes At Atomic And Ultra-High Resoluti		9e-07
2oq5_A	232	Crystal Structure Of Desc1, A New Member Of The Typ		1e-06
1v2k_T	223	Factor Xa Specific Inhibitor In Complex With Bovine		1e-06
3pwb_A	223	Bovine Trypsin Variant X(Tripleglu217ile227) In Com		1e-06
3plk_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		1e-06
1v2n_T	223	Potent Factor Xa Inhibitor In Complex With Bovine T		1e-06
3pmj_A	223	Bovine Trypsin Variant X(Tripleile227) In Complex W		1e-06
3unq_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		1e-06
3uns_A	223	Bovine Trypsin Variant X(Triplephe227) In Complex W		1e-06
1fiz_A	263	Three Dimensional Structure Of Beta-Acrosin From Bo		1e-06
1l4z_A	248	X-Ray Crystal Structure Of The Complex Of Microplas		1e-06
1l4d_A	249	Crystal Structure Of Microplasminogen-streptokinase		1e-06
1bml_A	250	Complex Of The Catalytic Domain Of Human Plasmin An		1e-06
1ddj_A	247	Crystal Structure Of Human Plasminogen Catalytic Do		1e-06
4dgj_A	235	Structure Of A Human Enteropeptidase Light Chain Va		1e-06
1j15_A	223	Benzamidine In Complex With Rat Trypsin Mutant X991		2e-06
2kai_B	152	Refined 2.5 Angstroms X-Ray Crystal Structure Of Th		2e-06
4dur_A	791	The X-Ray Crystal Structure Of Full-Length Type Ii		2e-06
4b2a_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
4b1t_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
4b2c_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
4b2b_A	223	Structure Of The Factor Xa-Like Trypsin Variant Tri		2e-06
1ekb_B	235	The Serine Protease Domain Of Enteropeptidase Bound		3e-06
2f91_A	237	1.2a Resolution Structure Of A Crayfish Trypsin Com		3e-06
2tld_E	220	Crystal Structure Of An Engineered Subtilisin Inhib		3e-06
3uwi_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		3e-06
3v0x_A	223	Bovine Trypsin Variant X(Tripleglu217phe227) In Com		3e-06
3gyl_B	261	Structure Of Prostasin At 1.3 Angstroms Resolution		4e-06
3e0p_B	271	The X-Ray Structure Of Human Prostasin In Complex W		4e-06
1kdq_B	99	Crystal Structure Analysis Of The Mutant S189d Rat		4e-06
3dfj_A	263	Crystal Structure Of Human Prostasin Length = 263		5e-06
2jet_C	99	Crystal Structure Of A Trypsin-Like Mutant (S189d,		5e-06
3bg8_A	238	Crystal Structure Of Factor Xia In Complex With Cla		7e-06
1zhm_A	238	Crystal Structure Of The Catalytic Domain Of The Co		8e-06
1zhp_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		8e-06
1xxd_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		8e-06
1xx9_A	238	Crystal Structure Of The Fxia Catalytic Domain In C		8e-06
1zhr_A	238	Crystal Structure Of The Catalytic Domain Of Coagul		8e-06
1zjd_A	237	Crystal Structure Of The Catalytic Domain Of Coagul		8e-06
3sor_A	238	Factor Xia In Complex With A Clorophenyl-tetrazole		8e-06
1zpz_A	238	Factor Xi Catalytic Domain Complexed With N-((R)-1-		8e-06
1zlr_A	237	Factor Xi Catalytic Domain Complexed With 2-Guanidi		8e-06
2f83_A	625	Crystal Structure At 2.9 Angstroms Resolution Of Hu		9e-06
2any_A	241	Expression, Crystallization And The Three-Dimension		1e-05
2anw_A	241	Expression, Crystallization And Three-Dimensional S		1e-05
1h9h_E	231	Complex Of Eeti-Ii With Porcine Trypsin Length = 23		2e-05
1fiw_A	290	Three-Dimensional Structure Of Beta-Acrosin From Ra		2e-05
2f9n_A	245	Crystal Structure Of The Recombinant Human Alpha I		2e-05
1op8_A	234	Crystal Structure Of Human Granzyme A Length = 234		3e-05
1orf_A	234	The Oligomeric Structure Of Human Granzyme A Reveal		3e-05
1bqy_A	234	Plasminogen Activator (tsv-pa) From Snake Venom Len		4e-05
1elt_A	236	Structure Of Native Pancreatic Elastase From North		4e-05
4h4f_A	249	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		5e-05
1pyt_D	251	Ternary Complex Of Procarboxypeptidase A, Proprotei		5e-05
2f9o_A	245	Crystal Structure Of The Recombinant Human Alpha I		6e-05
1lto_A	245	Human Alpha1-Tryptase Length = 245		6e-05
2bm2_A	245	Human Beta-Ii Tryptase In Complex With 4-(3-Aminome		8e-05
1a0l_A	244	Human Beta-Tryptase: A Ring-Like Tetramer With Acti		8e-05
2zeb_A	243	Potent, Nonpeptide Inhibitors Of Human Mast Cell Tr		8e-05
1mza_A	240	Crystal Structure Of Human Pro-Granzyme K Length =		8e-05
2xrc_A	565	Human Complement Factor I Length = 565		1e-04
2zch_P	237	Crystal Structure Of Human Prostate Specific Antige		1e-04
1hax_B	240	Snapshots Of Serine Protease Catalysis: (A) Acyl-En		1e-04
2est_E	240	Crystallographic Study Of The Binding Of A Trifluor		1e-04
1eai_A	240	Complex Of Ascaris Chymotrpsin/elastase Inhibitor W		2e-04
4gso_A	232	Structure Of Jararacussin-I Length = 232		2e-04
2bdg_A	223	Human Kallikrein 4 Complex With Nickel And P-aminob		2e-04
4e7n_A	238	Crystal Structure Of Ahv_tl-I, A Glycosylated Snake		2e-04
2aip_A	231	Crystal Structure Of Native Protein C Activator Fro		2e-04
1dan_H	254	Complex Of Active Site Inhibited Human Blood Coagul		2e-04
3ela_H	254	Crystal Structure Of Active Site Inhibited Coagulat		3e-04
1eaw_A	241	Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (A		3e-04
3bn9_B	241	Crystal Structure Of Mt-Sp1 In Complex With Fab Inh		3e-04
4igd_A	406	Crystal Structure Of The Zymogen Catalytic Region O		3e-04
3s9a_A	234	Russell's Viper Venom Serine Proteinase, Rvv-V (Clo		3e-04
3p8g_A	241	Crystal Structure Of Mt-Sp1 In Complex With Benzami		4e-04
2qxg_A	224	Crystal Structure Of Human Kallikrein 7 In Complex		5e-04
3bsq_A	227	Crystal Structure Of Human Kallikrein 7 Produced As		5e-04
1op2_A	234	Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snak		8e-04
1op0_A	234	Crystal Structure Of Aav-sp-i, A Glycosylated Snake		8e-04
3gov_B	251	Crystal Structure Of The Catalytic Region Of Human		8e-04

>pdb|1O5E|H Chain H, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (ala190 Upa) Length = 255

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 151 RVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 198

>pdb|1Z8G|A Chain A, Crystal Structure Of The Extracellular Region Of The Transmembrane Serine Protease Hepsin With Covalently Bound Preferred Substrate Length = 372

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 268 RVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 315

>pdb|3T2N|A Chain A, Human Hepsin Protease In Complex With The Fab Fragment Of An Inhibitory Antibody Length = 372

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 33/48 (68%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           RV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+
Sbjct: 268 RVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCE 315

>pdb|2PSX|A Chain A, Crystal Structure Of Human Kallikrein 5 In Complex With Leupeptin Length = 227

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 3/47 (6%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           +  LSQ+ C  EDAY  +I D+MFCAG  + G DSCQGDSGGP+VC+
Sbjct: 143 ISVLSQKRC--EDAYPRQIDDTMFCAGD-KAGRDSCQGDSGGPVVCN 186

>pdb|1TON|A Chain A, Rat Submaxillary Gland Serine Protease, Tonin. Structure Solution And Refinement At 1.8 Angstroms Resolution Length = 235

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDKGASL 77
            +  LS E C   + Y   + D M CAG  +GG D+C GDSGGP++CD  +QG   G + 
Sbjct: 149 NIHLLSNEKCI--ETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGAT 206
Query: 78  GTDRLSRACYVLSKMIRFYASV 99
              +  +   + +K+I+F + +
Sbjct: 207 PCAK-PKTPAIYAKLIKFTSWI 227

>pdb|2D8W|A Chain A, Structure Of Hyper-Vil-Trypsin Length = 223

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGXLEGGKDSCQGDSGGPVVC 183

>pdb|1TAW|A Chain A, Bovine Trypsin Complexed To Appi Length = 223

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSTSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1TRN|A Chain A, Crystal Structure Of Human Trypsin 1: Unexpected Phosphorylation Of Tyrosine 151 Length = 224

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LSQ  C  E +Y  +I  +MFC G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSQAKC--EASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQ 186

>pdb|3VEQ|B Chain B, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A Engineered Mutant Trypsin Inhibitor Length = 223

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1TAB|E Chain E, Structure Of The Trypsin-Binding Domain Of Bowman-Birk Type Protease Inhibitor And Its Interaction With Trypsin Length = 223

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|2VNT|A Chain A, Urokinase-Type Plasminogen Activator Inhibitor Complex With A 1-(7-Sulphoamidoisoquinolinyl)guanidine Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 182 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 231

>pdb|2FI4|E Chain E, Crystal Structure Of A Bpti Variant (Cys14->ser) In Complex With Trypsin Length = 223

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1Y59|T Chain T, Dianhydrosugar-Based Benzamidine, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Mutant Length = 223

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1EJN|A Chain A, Urokinase Plasminogen Activator B-Chain Inhibitor Complex Length = 253

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1FV9|A Chain A, Crystal Structure Of Human Microurokinase In Complex With 2- Amino-5-Hydroxy-Benzimidazole Length = 245

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|3OTJ|E Chain E, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT REFINEMENT Length = 223

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1OWD|A Chain A, Substituted 2-naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|4FU7|A Chain A, Crystal Structure Of The Urokinase Length = 246

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|3MWI|U Chain U, The Complex Crystal Structure Of Urokianse And 5-Nitro-1h-Indole-2- Amidine Length = 246

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1F0T|A Chain A, Bovine Trypsin Complexed With Rpr131247 Length = 243

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 163 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 203

>pdb|1W0Z|U Chain U, Urokinase Type Plasminogen Activator Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1GI8|B Chain B, A Novel Serine Protease Inhibition Motif Involving A Multi- Centered Short Hydrogen Bonding Network At The Active Site Length = 245

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1ZZZ|A Chain A, Trypsin Inhibitors With Rigid Tripeptidyl Aldehydes Length = 237

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 157 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 197

>pdb|2NWN|A Chain A, New Pharmacophore For Serine Protease Inhibition Revealed By Crystal Structure Of Human Urokinase-Type Plasminogen Activator Complexed With A Cyclic Peptidyl Inhibitor, Upain-1 Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1SC8|U Chain U, Urokinase Plasminogen Activator B-Chain-J435 Complex Length = 262

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 174 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 223

>pdb|1OWE|A Chain A, Substituted 2-Naphthamidine Inhibitors Of Urokinase Length = 245

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1FXY|A Chain A, Coagulation Factor Xa-Trypsin Chimera Inhibited With D-Phe-Pro-Arg- Chloromethylketone Length = 228

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LSQ  C  E +Y  +I  +MFC G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 146 VLSQAKC--EASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQ 190

>pdb|3IG6|B Chain B, Low Molecular Weigth Human Urokinase Type Plasminogen Activator 2-[6- (3'-Aminomethyl-Biphenyl-3-Yloxy)-4-(3-Dimethylamino- Pyrrolidin-1- Yl)-3, 5-Difluoro-Pyridin-2-Yloxy]-4-Dimethylamino-Benzoic Acid Complex Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1A0J|A Chain A, Crystal Structure Of A Non-Psychrophilic Trypsin From A Cold-Adapted Fish Species. Length = 223

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
           LS  SC    AY  +I  +MFCAG  +GG DSCQGDSGGP+VC+ Q
Sbjct: 143 LSSSSC--NSAYPGQITSNMFCAGFMEGGKDSCQGDSGGPVVCNGQ 186

>pdb|1LMW|B Chain B, Lmw U-Pa Structure Complexed With Egrcmk (Glu-Gly-Arg Chloromethyl Ketone) Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|1GJ7|B Chain B, Engineering Inhibitors Highly Selective For The S1 Sites Of Ser190 Trypsin-Like Serine Protease Drug Targets Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG 208

>pdb|3QK1|A Chain A, Crystal Structure Of Enterokinase-Like Trypsin Variant Length = 229

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1G3B|A Chain A, Bovine Beta-Trypsin Bound To Meta-Amidino Schiff Base Magnesium(Ii) Chelate Length = 228

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 148 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 188

>pdb|1TGS|Z Chain Z, Three-Dimensional Structure Of The Complex Between Pancreatic Secretory Inhibitor (Kazal Type) And Trypsinogen At 1.8 Angstroms Resolution. Structure Solution, Crystallographic Refinement And Preliminary Structural Interpretation Length = 229

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 149 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 189

>pdb|2TBS|A Chain A, Cold-Adaption Of Enzymes: Structural Comparison Between Salmon And Bovine Trypsins Length = 222

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   D+Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--DSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1NTP|A Chain A, Use Of The Neutron Diffraction HD EXCHANGE TECHNIQUE TO Determine The Conformational Dynamics Of Trypsin Length = 223

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|2RA3|A Chain A, Human Cationic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (bpti) Length = 224

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LSQ  C  E +Y  +I  +MFC G  +GG DSCQGD+GGP+VC+ Q
Sbjct: 142 VLSQAKC--EASYPGKITSNMFCVGFLEGGKDSCQGDAGGPVVCNGQ 186

>pdb|2O8U|A Chain A, Crystal Structure And Binding Epitopes Of Urokinase-Type Plasminogen Activator (C122aN145QS195A) IN COMPLEX WITH Inhibitors Length = 253

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   DSCQGD+GGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDAGGPLVCSLQG 208

>pdb|1OPH|B Chain B, Non-Covalent Complex Between Alpha-1-Pi-Pittsburgh And S195a Trypsin Length = 243

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGD+GGP+VC
Sbjct: 163 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDAGGPVVC 203

>pdb|1O5A|B Chain B, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (Ala190 Upa) Length = 253

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  +S   C++   YG+ +   M CA   Q   D+CQGDSGGP+VC +QG
Sbjct: 159 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDACQGDSGGPLVCSLQG 208

>pdb|1UTJ|A Chain A, Trypsin Specificity As Elucidated By Lie Calculations, X-Ray Structures And Association Constant Measurements Length = 242

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 158 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 203

>pdb|2ZPS|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 3 From Chum Salmon Length = 222

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1BZX|E Chain E, The Crystal Structure Of Anionic Salmon Trypsin In Complex With Bovine Pancreatic Trypsin Inhibitor Length = 222

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|5PTP|A Chain A, Structure Of Hydrolase (Serine Proteinase) Length = 223

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGD GGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAGYLEGGKDSCQGDXGGPVVC 183

>pdb|2ZPQ|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 1 From Chum Salmon Length = 222

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1HJ8|A Chain A, 1.00 Aa Trypsin From Atlantic Salmon Length = 222

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|2EEK|A Chain A, Crystal Structure Of Atlantic Cod Trypsin Complexed With Benzamidine Length = 220

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           LS   C   ++Y   I  SMFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 142 LSHADC--ANSYPGMITQSMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1BIT|A Chain A, The Crystal Structure Of Anionic Salmon Trypsin In A Second Crystal Form Length = 237

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 153 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 198

>pdb|2ZPR|A Chain A, Crystal Structure Of Anionic Trypsin Isoform 2 From Chum Salmon Length = 222

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1MBQ|A Chain A, Anionic Trypsin From Pacific Chum Salmon Length = 220

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS   C   ++Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 138 NIPILSYSDCN--NSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>pdb|1H4W|A Chain A, Structure Of Human Trypsin Iv (Brain Trypsin) Length = 224

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            L+Q  C+   +Y  +I +SMFC G  +GG DSCQ DSGGP+VC+ Q
Sbjct: 142 VLTQAECKA--SYPGKITNSMFCVGFLEGGKDSCQRDSGGPVVCNGQ 186

>pdb|1ANC|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Lys Length = 223

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDK 73
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+  +QG  K
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVK 192

>pdb|1SGF|G Chain G, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 237

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
            +  L  E C K  A+  ++ D+M CAG   GG D+C+GDSGGP++CD  +QG
Sbjct: 151 NLKLLPNEDCAK--AHIEKVTDAMLCAGEMDGGKDTCKGDSGGPLICDGVLQG 201

>pdb|1MCT|A Chain A, The Refined 1.6 Angstroms Resolution Crystal Structure Of The Complex Formed Between Porcine Beta-trypsin And Mcti-a, A Trypsin Inhibitor Of Squash Family Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   +Y  +I  +M C G  QGG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSNSSCK--SSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVCNGQ 186

>pdb|1TRM|A Chain A, The Three-Dimensional Structure Of Asn102 Mutant Of Trypsin. Role Of Asp102 In Serine Protease Catalysis Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1ANB|A Chain A, Anionic Trypsin Mutant With Ser 214 Replaced By Glu Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1SLW|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Nickel- Bound Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1SLX|B Chain B, Rat Anionic N143h, E151h Trypsin Complexed To A86h Ecotin; Zinc-Bound Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1EZS|C Chain C, Crystal Structure Of Ecotin Mutant M84r, W67a, G68a, Y69a, D70a Bound To Rat Anionic Trypsin Ii Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|3TGI|E Chain E, Wild-Type Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1CO7|E Chain E, R117h Mutant Rat Anionic Trypsin Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 245

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 165 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 206

>pdb|1AND|A Chain A, Anionic Trypsin Mutant With Arg 96 Replaced By His Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1QL9|A Chain A, Factor Xa Specific Inhibitor In Complex With Rat Trypsin Mutant X99rt Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 184

>pdb|1F7Z|A Chain A, Rat Trypsinogen K15a Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 233

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 153 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 194

>pdb|1F5R|A Chain A, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic Trypsin Inhibitor Length = 231

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 151 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 192

>pdb|1FY8|E Chain E, Crystal Structure Of The Deltaile16val17 Rat Anionic Trypsinogen-Bpti Complex Length = 231

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGDSGGP+VC+
Sbjct: 151 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCN 192

>pdb|1DLK|B Chain B, Crystal Structure Analysis Of Delta-Chymotrypsin Bound To A Peptidyl Chloromethyl Ketone Inhibitor Length = 230

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           LS  +C+K   +GT+IKD+M CAG+   G  SC GDSGGP+VC   G
Sbjct: 148 LSNTNCKKY--WGTKIKDAMICAGA--SGVSSCMGDSGGPLVCKKNG 190

>pdb|4DG4|A Chain A, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 224

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            L+Q  C+   +Y  +I +SMFC G  +GG DSCQ D+GGP+VC+ Q
Sbjct: 142 VLTQAECKA--SYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQ 186

>pdb|2R9P|A Chain A, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin Inhibitor(Bpti) Length = 224

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            L+Q  C+   +Y  +I +SMFC G  +GG DSCQ D+GGP+VC+ Q
Sbjct: 142 VLTQAECKA--SYPGKITNSMFCVGFLEGGKDSCQRDAGGPVVCNGQ 186

>pdb|3MYW|A Chain A, The Bowman-Birk Type Inhibitor From Mung Bean In Ternary Complex With Porcine Trypsin Length = 223

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   AY  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSDSSCK--SAYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 186

>pdb|1EPT|C Chain C, Refined 1.8 Angstroms Resolution Crystal Structure Of Porcine Epsilon-Trypsin Length = 98

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23 TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
           LS  SC+   +Y  +I  +M C G  QGG DSCQGDSGGP+VC+ Q
Sbjct: 17 VLSNSSCK--SSYPGQITGNMICVGFLQGGKDSCQGDSGGPVVCNGQ 61

>pdb|2CGA|A Chain A, Bovine Chymotrypsinogen A. X-Ray Crystal Structure Analysis And Refinement Of A New Crystal Form At 1.8 Angstroms Resolution Length = 245

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           LS  +C+K   +GT+IKD+M CAG+   G  SC GDSGGP+VC   G
Sbjct: 163 LSNTNCKKY--WGTKIKDAMICAGA--SGVSSCMGDSGGPLVCKKNG 205

>pdb|1MTN|C Chain C, Bovine Alpha-Chymotrypsin:bpti Crystallization Length = 97

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24 LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
          LS  +C+K   +GT+IKD+M CAG+   G  SC GDSGGP+VC   G
Sbjct: 15 LSNTNCKKY--WGTKIKDAMICAGA--SGVSSCMGDSGGPLVCKKNG 57

>pdb|1AFQ|C Chain C, Crystal Structure Of Bovine Gamma-Chymotrypsin Complexed With A Synthetic Inhibitor Length = 96

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24 LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
          LS  +C+K   +GT+IKD+M CAG+   G  SC GDSGGP+VC   G
Sbjct: 14 LSNTNCKKY--WGTKIKDAMICAGA--SGVSSCMGDSGGPLVCKKNG 56

>pdb|1K9O|E Chain E, Crystal Structure Of Michaelis Serpin-Trypsin Complex Length = 223

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGD+GGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDAGGPVVCN 184

>pdb|3TGJ|E Chain E, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 233

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGD+GGP+VC+
Sbjct: 153 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDAGGPVVCN 194

>pdb|2WPM|S Chain S, Factor Ixa Superactive Mutant, Egr-Cmk Inhibited Length = 235

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           RV  + + +C +   +   I ++MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 147 RVPLVDRATCLRSTKF--TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

>pdb|2WPI|S Chain S, Factor Ixa Superactive Double Mutant Length = 235

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           RV  + + +C +   +   I ++MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 147 RVPLVDRATCLRSTKF--TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

>pdb|2WPH|S Chain S, Factor Ixa Superactive Triple Mutant Length = 235

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           RV  + + +C +   +   I ++MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 147 RVPLVDRATCLRSTKF--TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

>pdb|1RFN|A Chain A, Human Coagulation Factor Ixa In Complex With P-Amino Benzamidine Length = 235

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           RV  + + +C +   +   I ++MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 147 RVPLVDRATCLRSTKF--TIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

>pdb|1L2E|A Chain A, Human Kallikrein 6 (Hk6) Active Form With Benzamidine Inhibitor Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +  +S+E C  E AY  +I  +M CAG  + G DSCQGDSGGP+VC
Sbjct: 139 IHLVSREEC--EHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVC 182

>pdb|3TGK|E Chain E, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17 Complexed With Bovine Pancreatic Trypsin Inhibitor (Bpti) Length = 231

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQG+SGGP+VC+
Sbjct: 151 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGNSGGPVVCN 192

>pdb|1XVM|A Chain A, Trypsin From Fusarium Oxysporum- Room Temperature To Atomic Resolution Length = 224

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 24  LSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIV 65
           +S+ +CR +  YGT  I + MFCAG   GG DSCQGDSGGPIV
Sbjct: 145 VSRATCRAQ--YGTSAITNQMFCAGVSSGGKDSCQGDSGGPIV 185

>pdb|1GDU|A Chain A, Fusarium Oxysporum Trypsin At Atomic Resolution Length = 224

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 24  LSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIV 65
           +S+ +CR +  YGT  I + MFCAG   GG DSCQGDSGGPIV
Sbjct: 145 VSRATCRAQ--YGTSAITNQMFCAGVSSGGKDSCQGDSGGPIV 185

>pdb|1TFX|A Chain A, Complex Of The Second Kunitz Domain Of Tissue Factor Pathway Inhibitor With Porcine Trypsin Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   +Y  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSDSSCK--SSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 186

>pdb|2A31|A Chain A, Trypsin In Complex With Borate Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   +Y  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSDSSCK--SSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 186

>pdb|1AN1|E Chain E, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   +Y  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 142 VLSDSSCK--SSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 186

>pdb|1GVL|A Chain A, Human Prokallikrein 6 (Hk6) PROZYME PROPROTEASE M Proneurosin Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +  +S+E C  E AY  +I  +M CAG  + G DSCQGDSGGP+VC
Sbjct: 140 IHLVSREEC--EHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVC 183

>pdb|4D8N|A Chain A, Human Kallikrein 6 Inhibitors With A Para-Amidobenzylanmine P1 Group Carry A High Binding Efficiency Length = 223

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +  +S+E C  E AY  +I  +M CAG  + G DSCQGDSGGP+VC
Sbjct: 139 IHLVSREEC--EHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVC 182

>pdb|4AN7|A Chain A, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin Length = 231

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LS  SC+   +Y  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 150 VLSDSSCKS--SYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 194

>pdb|1DPO|A Chain A, Structure Of Rat Trypsin Length = 223

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG DSCQGD GGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKDSCQGDCGGPVVCN 184

>pdb|1NPM|A Chain A, Neuropsin, A Serine Protease Expressed In The Limbic System Of Mouse Brain Length = 225

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            V   SQ  C  E AY  +I + M CAGS   GAD+CQGDSGGP+VCD
Sbjct: 143 EVKIYSQNKC--ERAYPGKITEGMVCAGS-SNGADTCQGDSGGPLVCD 187

>pdb|1SGF|A Chain A, Crystal Structure Of 7s Ngf: A Complex Of Nerve Growth Factor With Four Binding Proteins (serine Proteinases) Length = 240

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDKGASL 77
            +  L  E C K  A+  ++ D+M CAG   GG+ +C+ DSGGP++CD  +QG     S 
Sbjct: 154 NLKLLPNEDCDK--AHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGI---TSW 208
Query: 78  GTDRLSRACY--VLSKMIRFYASVGIEATSSCSP 109
           G +         V +K+I+F  S  I  T + +P
Sbjct: 209 GPEPCGEPTEPSVYTKLIKF--SSWIRETMANNP 240

>pdb|1YBW|A Chain A, Protease Domain Of Hgfa With No Inhibitor Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  ++   C   + YG  I  +M CAG F   +D+CQGDSGGP+ C+  G
Sbjct: 187 VPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNG 236

>pdb|1AMH|A Chain A, Uncomplexed Rat Trypsin Mutant With Asp 189 Replaced With Ser (D189s) Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG  SCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKSSCQGDSGGPVVCN 184

>pdb|1HJ9|A Chain A, Atomic Resolution Structures Of Trypsin Provide Insight Into Structural Radiation Damage Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCA   +G  DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAYGLEGKGDSCQGDSGGPVVC 183

>pdb|1UHB|B Chain B, Crystal Structure Of Porcine Alpha Trypsin Bound With Auto Catalyticaly Produced Native Peptide At 2.15 A Resolution Length = 98

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 23 TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
           LS  SC+   +Y  +I  +M C G  +GG DSCQGDSGGP+VC+ Q
Sbjct: 17 VLSDSSCK--SSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ 61

>pdb|1V2J|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssri) Bt.C1 Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1V2Q|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Sswi)bt.B4 Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1V2U|T Chain T, Benzamidine In Complex With Bovine Trypsin Varinat X(Ssai) Bt.D1 Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1V2O|T Chain T, Trypsin Inhibitor In Complex With Bovine Trypsin Variant X(Ssyi)bt.B4 Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|2WUB|A Chain A, Crystal Structure Of Hgfa In Complex With The Allosteric Non-Inhibitory Antibody Fab40.Deltatrp Length = 257

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  ++   C   + YG  I  +M CAG F   +D+CQGDSGGP+ C+  G
Sbjct: 152 VPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNG 201

>pdb|2R0L|A Chain A, Short Form Hgfa With Inhibitory Fab75 Length = 248

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           V  ++   C   + YG  I  +M CAG F   +D+CQGDSGGP+ C+  G
Sbjct: 152 VPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNG 201

>pdb|1V2S|T Chain T, Benzamidine In Complex With Bovine Trypsin Variant X(Ssfi.Glu)bt.D1 Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|3KCG|H Chain H, Crystal Structure Of The Antithrombin-Factor Ixa- Pentasaccharide Complex Length = 235

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           RV  + + +C +   +   I ++MFCAG  +GG DSCQGD+GGP V +++G
Sbjct: 147 RVPLVDRATCLRSTKF--TIYNNMFCAGFHEGGRDSCQGDAGGPHVTEVEG 195

>pdb|3UQV|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDSCQGDSGGPVVC 183

>pdb|1SPJ|A Chain A, Structure Of Mature Human Tissue Kallikrein (Human Kallikrein 1 Or Klk1) At 1.70 Angstrom Resolution With Vacant Active Site Length = 238

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L  + C+K  A+  ++ D M C G  +GG D+C GDSGGP++CD
Sbjct: 156 LPNDECKK--AHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCD 197

>pdb|1RJX|B Chain B, Human Plasminogen Catalytic Domain, K698m Mutant Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC
Sbjct: 157 QLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVC 203

>pdb|3UIR|A Chain A, Crystal Structure Of The Plasmin-Textilinin-1 Complex Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC
Sbjct: 160 VIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVC 203

>pdb|1BUI|B Chain B, Structure Of The Ternary Microplasmin-Staphylokinase-Microplasmin Complex: A Proteinase-Cofactor-Substrate Complex In Action Length = 250

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC
Sbjct: 160 QLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVC 206

>pdb|1QRZ|A Chain A, Catalytic Domain Of Plasminogen Length = 246

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC
Sbjct: 159 VIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVC 202

>pdb|1BRB|E Chain E, Crystal Structures Of Rat Anionic Trypsin Complexed With The Protein Inhibitors Appi And Bpti Length = 223

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C  E +Y  +I D+M C G  +GG  SCQGDSGGP+VC+
Sbjct: 143 LPQADC--EASYPGKITDNMVCVGFLEGGKGSCQGDSGGPVVCN 184

>pdb|1AO5|A Chain A, Mouse Glandular Kallikrein-13 (Prorenin Converting Enzyme) Length = 237

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           +  L  E+C K   Y  ++ D M CAG   GG D+C+ DSGGP++CD
Sbjct: 152 ITLLPNENCAK--VYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICD 196

>pdb|1PFX|C Chain C, Porcine Factor Ixa Length = 235

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           I  +MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 164 IYSNMFCAGFHEGGKDSCQGDSGGPHVTEVEG 195

>pdb|1PPZ|A Chain A, Trypsin Complexes At Atomic And Ultra-High Resolution Length = 224

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 24  LSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIV 65
           +S+ +CR +  YGT  I + MFCAG   GG DSCQGD GGPIV
Sbjct: 145 VSRATCRAQ--YGTSAITNQMFCAGVSSGGKDSCQGDXGGPIV 185

>pdb|2OQ5|A Chain A, Crystal Structure Of Desc1, A New Member Of The Type Ii Transmembrane Serine Proteinases Family Length = 232

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           +V  +   +C +  AY   I   M CAGS +G  D+CQGDSGGP+V
Sbjct: 142 QVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLV 187

>pdb|1V2K|T Chain T, Factor Xa Specific Inhibitor In Complex With Bovine Trypsin Variant X(Triple.Glu)bt.D2 Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|3PWB|A Chain A, Bovine Trypsin Variant X(Tripleglu217ile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|3PLK|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|1V2N|T Chain T, Potent Factor Xa Inhibitor In Complex With Bovine Trypsin Variant X(99175190)BT Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|3PMJ|A Chain A, Bovine Trypsin Variant X(Tripleile227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|3UNQ|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|3UNS|A Chain A, Bovine Trypsin Variant X(Triplephe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDSGGPVVC 183

>pdb|1FIZ|A Chain A, Three Dimensional Structure Of Beta-Acrosin From Boar Spermatozoa Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           RV  +  E C     Y  RI+ +  CAG  +G  D+CQGDSGGP++C
Sbjct: 159 RVALIDLELCNSTRWYNGRIRSTNVCAGYPRGKIDTCQGDSGGPLMC 205

>pdb|1L4Z|A Chain A, X-Ray Crystal Structure Of The Complex Of Microplasminogen With Alpha Domain Of Streptokinase In The Presence Cadmium Ions Length = 248

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  + C + +    R++ +  CAG   GG DSCQGD+GGP+VC
Sbjct: 161 VIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC 204

>pdb|1L4D|A Chain A, Crystal Structure Of Microplasminogen-streptokinase Alpha Domain Complex Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  +  + C + +    R++ +  CAG   GG DSCQGD+GGP+VC
Sbjct: 159 QLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC 205

>pdb|1BML|A Chain A, Complex Of The Catalytic Domain Of Human Plasmin And Streptokinase Length = 250

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  + C + +    R++ +  CAG   GG DSCQGD+GGP+VC
Sbjct: 163 VIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC 206

>pdb|1DDJ|A Chain A, Crystal Structure Of Human Plasminogen Catalytic Domain Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  + C + +    R++ +  CAG   GG DSCQGD+GGP+VC
Sbjct: 160 VIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVC 203

>pdb|4DGJ|A Chain A, Structure Of A Human Enteropeptidase Light Chain Variant Length = 235

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           V  LS E C+++      I ++M CAG  +GG DSCQGDSGGP++C
Sbjct: 149 VPLLSNERCQQQMP-EYNITENMICAGYEEGGIDSCQGDSGGPLMC 193

>pdb|1J15|A Chain A, Benzamidine In Complex With Rat Trypsin Mutant X99175190RT Length = 223

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L Q  C    ++   I D+M C G  +GG D+CQGDSGGP+VC+
Sbjct: 143 LPQADCEASSSF--IITDNMVCVGFLEGGKDACQGDSGGPVVCN 184

>pdb|2KAI|B Chain B, Refined 2.5 Angstroms X-Ray Crystal Structure Of The Complex Formed By Porcine Kallikrein A And The Bovine Pancreatic Trypsin Inhibitor. Crystallization, Patterson Search, Structure Determination, Refinement, Structure And Comparison With Its Components And With The Bovine Trypsin- Pancreatic Trypsin Inhibitor Complex Length = 152

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 33  DAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           DA+  ++ +SM CAG   GG D+C GDSGGP++C+
Sbjct: 77  DAHPDKVTESMLCAGYLPGGKDTCMGDSGGPLICN 111

>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human Plasminogen Length = 791

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC
Sbjct: 705 IENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVC 747

>pdb|4B2A|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGD+GGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDAGGPVVC 183

>pdb|4B1T|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGD+GGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDAGGPVVC 183

>pdb|4B2C|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGD+GGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDAGGPVVC 183

>pdb|4B2B|A Chain A, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 223

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFCAG  +GG D+CQGD+GGP+VC
Sbjct: 156 ITSNMFCAGYLEGGKDACQGDAGGPVVC 183

>pdb|1EKB|B Chain B, The Serine Protease Domain Of Enteropeptidase Bound To Inhibitor Val- Asp-asp-asp-asp-lys-chloromethane Length = 235

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           V  LS E C+++      I ++M CAG   GG DSCQGDSGGP++C
Sbjct: 149 VPLLSNEKCQQQMP-EYNITENMVCAGYEAGGVDSCQGDSGGPLMC 193

>pdb|2F91|A Chain A, 1.2a Resolution Structure Of A Crayfish Trypsin Complexed With A Peptide Inhibitor, Sgti Length = 237

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 24  LSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPI 64
           +S E CR +  YG   I DSM CAG  +GG DSCQGDSGGP+
Sbjct: 154 VSDEDCRAD--YGADEILDSMICAGVPEGGKDSCQGDSGGPL 193

>pdb|2TLD|E Chain E, Crystal Structure Of An Engineered Subtilisin Inhibitor Complexed With Bovine Trypsin Length = 220

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 143 LSDSSCK--SAYPGQITSNMFCAG-LEGG-DSCQGDSGGPVVC 181

>pdb|3UWI|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFC G  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCVGYLEGGKDACQGDSGGPVVC 183

>pdb|3V0X|A Chain A, Bovine Trypsin Variant X(Tripleglu217phe227) In Complex With Small Molecule Inhibitor Length = 223

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           I  +MFC G  +GG D+CQGDSGGP+VC
Sbjct: 156 ITSNMFCVGYLEGGKDACQGDSGGPVVC 183

>pdb|3GYL|B Chain B, Structure Of Prostasin At 1.3 Angstroms Resolution In Complex With A Calcium Ion. Length = 261

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +++ M CAG  +GG D+CQGDSGGP+ C ++G
Sbjct: 173 VQEDMVCAGYVEGGKDACQGDSGGPLSCPVEG 204

>pdb|3E0P|B Chain B, The X-Ray Structure Of Human Prostasin In Complex With A Covalent Benzoxazole Inhibitor Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +++ M CAG  +GG D+CQGDSGGP+ C ++G
Sbjct: 173 VQEDMVCAGYVEGGKDACQGDSGGPLSCPVEG 204

>pdb|1KDQ|B Chain B, Crystal Structure Analysis Of The Mutant S189d Rat Chymotrypsin Length = 99

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24 LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
          +S+  C+K  ++G++I D M CAG+   G DSC GDSGGP+VC   G
Sbjct: 17 VSEADCKK--SWGSKITDVMTCAGA--SGVDSCMGDSGGPLVCQKDG 59

>pdb|3DFJ|A Chain A, Crystal Structure Of Human Prostasin Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +++ M CAG  +GG D+CQGDSGGP+ C ++G
Sbjct: 173 VQEDMVCAGYVEGGKDACQGDSGGPLSCPVEG 204

>pdb|2JET|C Chain C, Crystal Structure Of A Trypsin-Like Mutant (S189d, A226g) Chymotrypsin Length = 99

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 24 LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
          +S+  C+K  ++G++I D M CAG+   G DSC GDSGGP+VC   G
Sbjct: 17 VSEADCKK--SWGSKITDVMTCAGA--SGVDSCMGDSGGPLVCQKDG 59

>pdb|3BG8|A Chain A, Crystal Structure Of Factor Xia In Complex With Clavatadine A Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKRYR-GHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZHM|A Chain A, Crystal Structure Of The Catalytic Domain Of The Coagulation Factor Xia In Complex With Benzamidine (s434a- T475a-k437 Mutant) Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZHP|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-K505 Mutant) Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1XXD|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Mutated Ecotin Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1XX9|A Chain A, Crystal Structure Of The Fxia Catalytic Domain In Complex With Ecotinm84r Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZHR|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Benzamidine (S434a-T475a-C482s-K437a Mutant) Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZJD|A Chain A, Crystal Structure Of The Catalytic Domain Of Coagulation Factor Xi In Complex With Kunitz Protease Inhibitor Domain Of Protease Nexin Ii Length = 237

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|3SOR|A Chain A, Factor Xia In Complex With A Clorophenyl-tetrazole Inhibitor Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZPZ|A Chain A, Factor Xi Catalytic Domain Complexed With N-((R)-1-(4- Bromophenyl)ethyl)urea-Asn-Val-Arg-Alpha-Ketothiazole Length = 238

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|1ZLR|A Chain A, Factor Xi Catalytic Domain Complexed With 2-Guanidino-1-(4-(4,4,5,5- Tetramethyl-1,3,2-Dioxaborolan-2-Yl)phenyl)ethyl Nicotinate Length = 237

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 149 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human Plasma Coagulation Factor Xi Zymogen Length = 625

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 536 KIPLVTNEECQKR-YRGHKITHKMICAGYREGGKDACKGDSGGPLSC 581

>pdb|2ANY|A Chain A, Expression, Crystallization And The Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ++ E C+K      +I   M CAG  +GG D+C+GDSGGP+VC   G
Sbjct: 153 VTNEECQKR-YQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNG 198

>pdb|2ANW|A Chain A, Expression, Crystallization And Three-Dimensional Structure Of The Catalytic Domain Of Human Plasma Kallikrein: Implications For Structure-Based Design Of Protease Inhibitors Length = 241

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 24  LSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ++ E C+K      +I   M CAG  +GG D+C+GDSGGP+VC   G
Sbjct: 153 VTNEECQKRYQ-DYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNG 198

>pdb|1FIW|A Chain A, Three-Dimensional Structure Of Beta-Acrosin From Ram Spermatozoa Length = 290

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           RV  +    C     Y  RI+ +  CAG  +G  D+CQGDSGGP++C 
Sbjct: 159 RVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCK 206

>pdb|2F9N|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant K192qD216G IN COMPLEX WITH LEUPEPTIN Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           I+D M CAG+ Q   DSCQGDSGGP+VC + G
Sbjct: 175 IRDDMLCAGNSQ--RDSCQGDSGGPLVCKVNG 204

>pdb|1OP8|A Chain A, Crystal Structure Of Human Granzyme A Length = 234

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 21  VGTLSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           +  + ++ C   + Y     I  +M CAGS +GG DSC GDSG P++C+
Sbjct: 143 ITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE 191

>pdb|1ORF|A Chain A, The Oligomeric Structure Of Human Granzyme A Reveals The Molecular Determinants Of Substrate Specificity Length = 234

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 21  VGTLSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           +  + ++ C   + Y     I  +M CAGS +GG DSC GDSG P++C+
Sbjct: 143 ITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE 191

>pdb|1BQY|A Chain A, Plasminogen Activator (tsv-pa) From Snake Venom Length = 234

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 20  RVGTLSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  L    CR   AY  R + ++  CAG  QGG D+C  DSGGP++C+
Sbjct: 141 NINILDHAVCRT--AYSWRQVANTTLCAGILQGGRDTCHFDSGGPLICN 187

>pdb|1ELT|A Chain A, Structure Of Native Pancreatic Elastase From North Atlantic Salmon At 1.61 Angstroms Resolution Length = 236

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADS-CQGDSGGPIVCDIQG 70
           ++   +C     +G+ +K +M CAG   GGA+S C GDSGGP+ C + G
Sbjct: 152 SVDHATCSSSGWWGSTVKTTMVCAG---GGANSGCNGDSGGPLNCQVNG 197

>pdb|4H4F|A Chain A, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 249

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
            +   +C + D +G R+K +M CAG   G   +C GDSGGP+ C ++ 
Sbjct: 151 VVDHATCSRIDWWGFRVKKTMVCAGG-DGVISACNGDSGGPLNCQLEN 197

>pdb|1PYT|D Chain D, Ternary Complex Of Procarboxypeptidase A, Proproteinase E, And Chymotrypsinogen C Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 28  SCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +C + D +GT +K++M CAG   G   +C GDSGGP+ C   G
Sbjct: 169 TCSQRDWWGTTVKETMVCAGG-DGVISACNGDSGGPLNCQADG 210

>pdb|2F9O|A Chain A, Crystal Structure Of The Recombinant Human Alpha I Tryptase Mutant D216g Length = 245

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           I+D M CAG+ Q   DSC+GDSGGP+VC + G
Sbjct: 175 IRDDMLCAGNSQ--RDSCKGDSGGPLVCKVNG 204

>pdb|1LTO|A Chain A, Human Alpha1-Tryptase Length = 245

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           I+D M CAG+ Q   DSC+GDSGGP+VC + G
Sbjct: 175 IRDDMLCAGNSQ--RDSCKGDSGGPLVCKVNG 204

>pdb|2BM2|A Chain A, Human Beta-Ii Tryptase In Complex With 4-(3-Aminomethyl- Phenyl)-Piperidin-1-Yl-(5-Phenethyl- Pyridin-3-Yl)- Methanone Length = 245

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ++D M CAG+ +   DSCQGDSGGP+VC + G
Sbjct: 175 VRDDMLCAGNTR--RDSCQGDSGGPLVCKVNG 204

>pdb|1A0L|A Chain A, Human Beta-Tryptase: A Ring-Like Tetramer With Active Sites Facing A Central Pore Length = 244

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ++D M CAG+ +   DSCQGDSGGP+VC + G
Sbjct: 175 VRDDMLCAGNTR--RDSCQGDSGGPLVCKVNG 204

>pdb|2ZEB|A Chain A, Potent, Nonpeptide Inhibitors Of Human Mast Cell Tryptase Length = 243

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           ++D M CAG+ +   DSCQGDSGGP+VC + G
Sbjct: 175 VRDDMLCAGNTR--RDSCQGDSGGPLVCKVNG 204

>pdb|1MZA|A Chain A, Crystal Structure Of Human Pro-Granzyme K Length = 240

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 21  VGTLSQESCRKEDAYG--TRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           V  LS++ C  +  Y     I   M CAG  +G  DSC+GD+GGP++C
Sbjct: 149 VTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC 196

>pdb|2XRC|A Chain A, Human Complement Factor I Length = 565

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 35  YGTRIKD-SMFCAGSFQGGADSCQGDSGGPIVC 66
           YG R  +  M CAG++ G  D+C+GDSGGP+VC
Sbjct: 481 YGNRFYEKEMECAGTYDGSIDACKGDSGGPLVC 513

>pdb|2ZCH|P Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody Length = 237

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQGCDKGAS 76
           +  +S + C +   +  ++   M CAG + GG  +C GDSGGP+VC+  +QG     S
Sbjct: 152 LHVISNDVCAQ--VHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNGVLQGITSWGS 207

>pdb|1HAX|B Chain B, Snapshots Of Serine Protease Catalysis: (A) Acyl-Enzyme Intermediate Between Porcine Pancreatic Elastase And Human Beta-Casomorphin-7 At Ph 5 Length = 240

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           T+    C     +G+ +K+SM CAG   G    CQGDSGGP+ C + G
Sbjct: 152 TVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG 198

>pdb|2EST|E Chain E, Crystallographic Study Of The Binding Of A Trifluoroacetyl Dipeptide Anilide Inhibitor With Elastase Length = 240

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           T+    C     +G+ +K+SM CAG   G    CQGDSGGP+ C + G
Sbjct: 152 TVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG 198

>pdb|1EAI|A Chain A, Complex Of Ascaris Chymotrpsin/elastase Inhibitor With Porcine Elastase Length = 240

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 23  TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           T+    C     +G+ +K+SM CAG   G    CQGDSGGP+ C + G
Sbjct: 152 TVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG 198

>pdb|4GSO|A Chain A, Structure Of Jararacussin-I Length = 232

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            +  +  E C  + AY      +  CAG  +GG D+C GDSGGP++C+ Q
Sbjct: 140 NINLVDYEVC--QGAYNGLPAKTTLCAGVLEGGKDTCVGDSGGPLICNGQ 187

>pdb|2BDG|A Chain A, Human Kallikrein 4 Complex With Nickel And P-aminobenzamidine Length = 223

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 35  YGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           Y      SMFCAG  Q   DSC GDSGGP++C+
Sbjct: 152 YDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICN 184

>pdb|4E7N|A Chain A, Crystal Structure Of Ahv_tl-I, A Glycosylated Snake-Venom Thrombin- Like Enzyme From Agkistrodon Halys Length = 238

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20  RVGTLSQESCRKE-DAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            +  L  E CR     +         CAG  +GG D+C+GDSGGP++C+ Q
Sbjct: 143 NINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNGQ 193

>pdb|2AIP|A Chain A, Crystal Structure Of Native Protein C Activator From The Venom Of Copperhead Snake Agkistrodon Contortrix Contortrix Length = 231

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 42  SMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
           +  CAG  +GG D+C+GDSGGP++C+ Q
Sbjct: 159 TTLCAGILEGGKDTCKGDSGGPLICNGQ 186

>pdb|1DAN|H Chain H, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 38  RIKDSMFCAGSFQGGADSCQGDSGGP-------------IVCDIQGCDKGASLGT-DRLS 83
            I + MFCAG   G  DSC+GDSGGP             IV   QGC      G   R+S
Sbjct: 170 NITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVS 229
Query: 84  RACYVLSKMIR 94
           +    L K++R
Sbjct: 230 QYIEWLQKLMR 240

>pdb|3ELA|H Chain H, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia Mutant In Complex With Soluble Tissue Factor Length = 254

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 38  RIKDSMFCAGSFQGGADSCQGDSGGP-------------IVCDIQGCDKGASLGT-DRLS 83
            I + MFCAG   G  DSC+GDSGGP             IV   QGC      G   R+S
Sbjct: 170 NITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVS 229
Query: 84  RACYVLSKMIR 94
           +    L K++R
Sbjct: 230 QYIEWLQKLMR 240

>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti (Aprotinin) Complex Length = 241

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
            +  ++Q +C  E+    +I   M C G   GG DSCQGDSGGP+
Sbjct: 153 EIRVINQTTC--ENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPL 195

>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor E2 Length = 241

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
            +  ++Q +C  E+    +I   M C G   GG DSCQGDSGGP+
Sbjct: 153 EIRVINQTTC--ENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPL 195

>pdb|4IGD|A Chain A, Crystal Structure Of The Zymogen Catalytic Region Of Human Masp-1 Length = 406

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 24  LSQESCRKEDA-YGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           +   +C+K  A    ++   M CAG  +GG D+C GDSGGP+V
Sbjct: 316 VDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMV 358

>pdb|3S9A|A Chain A, Russell's Viper Venom Serine Proteinase, Rvv-V (Closed-Form) Length = 234

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 44  FCAGSFQGGADSCQGDSGGPIVCD 67
            CAG  +GG D+C GDSGGP++C+
Sbjct: 164 LCAGILKGGRDTCHGDSGGPLICN 187

>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine Length = 241

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
            +  + Q +C  E+    +I   M C G   GG DSCQGDSGGP+
Sbjct: 153 EIRVIQQTTC--ENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPL 195

>pdb|2QXG|A Chain A, Crystal Structure Of Human Kallikrein 7 In Complex With Ala- Ala-phe-chloromethylketone Length = 224

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           V  +S + C K   Y   +++SM CAG      ++C GDSGGP+VC
Sbjct: 139 VKLISPQDCTK--VYKDLLENSMLCAGIPDSKKNACNGDSGGPLVC 182

>pdb|3BSQ|A Chain A, Crystal Structure Of Human Kallikrein 7 Produced As A Secretion Protein In E.Coli Length = 227

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 21  VGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           V  +S + C K   Y   +++SM CAG      ++C GDSGGP+VC
Sbjct: 139 VKLISPQDCTK--VYKDLLENSMLCAGIPDSKKNACNGDSGGPLVC 182

>pdb|1OP2|A Chain A, Crystal Structure Of Aav-Sp-Ii, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 44  FCAGSFQGGADSCQGDSGGPIVCDIQ 69
            CAG  QGG D+C GDSGGP++C+ Q
Sbjct: 164 LCAGIVQGGKDTCGGDSGGPLICNGQ 189

>pdb|1OP0|A Chain A, Crystal Structure Of Aav-sp-i, A Glycosylated Snake Venom Serine Proteinase From Agkistrodon Acutus Length = 234

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 44  FCAGSFQGGADSCQGDSGGPIVCDIQ 69
            CAG  QGG D+C GDSGGP++C+ Q
Sbjct: 164 LCAGIVQGGKDTCGGDSGGPLICNGQ 189

>pdb|3GOV|B Chain B, Crystal Structure Of The Catalytic Region Of Human Masp-1 Length = 251

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 20  RVGTLSQESCRKEDA-YGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
            +  +   +C+K  A    ++   M CAG  +GG D+C GDSGGP+V
Sbjct: 157 EIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMV 203

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	2e-23
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	3e-23
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	9e-23
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	1e-22
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	2e-22
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	3e-22
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	8e-22
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	1e-21
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	2e-21
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	2e-21
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	3e-21
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	4e-21
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	5e-21
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	9e-21
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	1e-20
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	1e-20
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	1e-20
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	1e-20
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	2e-20
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	2e-20
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	2e-20
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	2e-20
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	2e-20
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	3e-20
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	3e-20
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	3e-20
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	3e-20
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	4e-20
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	4e-20
1aut_C	250	Activated protein C; serine proteinase, plasma cal	4e-20
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	4e-20
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	5e-20
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	5e-20
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	5e-20
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	6e-20
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	1e-19
2aiq_A	231	Protein C activator; snake venom serine proteinase	1e-19
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	1e-19
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	1e-19
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	2e-19
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	2e-19
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	2e-19
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	3e-19
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	3e-19
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	4e-19
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	4e-19
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	4e-19
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	5e-19
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	6e-19
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	6e-19
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	8e-19
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	9e-19
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	1e-18
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	1e-18
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	1e-18
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	2e-18
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	5e-18
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	8e-18
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	2e-17
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	2e-17
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	3e-17
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	4e-17
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	4e-17
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	5e-17
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	7e-17
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	8e-17
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	1e-16
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	1e-16
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	1e-16
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	2e-16
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	2e-16
1md8_A	329	C1R complement serine protease; innate immunity, a	3e-16
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	3e-16
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	6e-16
1gpz_A	399	Complement C1R component; hydrolase, activation, i	6e-16
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	6e-16
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	8e-16
1elv_A	333	Complement C1S component; trypsin-like serin prote	2e-15
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	2e-15
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	5e-15
1a7s_A	225	Heparin binding protein; serine protease homolog,	1e-14
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	3e-14
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	5e-14
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	2e-13
2xrc_A	565	Human complement factor I; immune system, hydrolas	2e-13
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	5e-13
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	9e-13
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	1e-12
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	1e-12
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	2e-12
3hrz_D	741	Complement factor B; serine protease, glycosilated	2e-10

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ... Length = 247

 Score = 89.6 bits (223), Expect = 2e-23
 Identities = 26/67 (38%), Positives = 34/67 (50%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
              S+       LK   V  +S   C++   YG+ +   M CA   Q   DSCQGDSGGP
Sbjct: 142 KENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGP 201

Query: 64  IVCDIQG 70
           +VC +QG
Sbjct: 202 LVCSLQG 208

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A* Length = 248

 Score = 89.2 bits (222), Expect = 3e-23
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            +  + +  + +L+ A V  ++   C   + YG  I  +M CAG F   +D+CQGDSGGP
Sbjct: 135 HLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP 194

Query: 64  IVCDIQG 70
           + C+  G
Sbjct: 195 LACEKNG 201

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ... Length = 223

 Score = 87.6 bits (218), Expect = 9e-23
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
              SS  S    LK  +   LS  SC+   AY  +I  +MFCAG  +GG DSCQGDSGGP
Sbjct: 123 NTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGP 180

Query: 64  IVCD--IQG 70
           +VC   +QG
Sbjct: 181 VVCSGKLQG 189

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A Length = 283

 Score = 87.8 bits (218), Expect = 2e-22
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            +  + +  + +L+ A V  ++   C   + YG  I  +M CAG F   +D+CQGDSGGP
Sbjct: 170 HLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGP 229

Query: 64  IVCDIQG 70
           + C+  G
Sbjct: 230 LACEKNG 236

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2 Length = 228

 Score = 86.0 bits (214), Expect = 3e-22
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
             ASS A     L+      LSQ  C    +Y  +I  +MFC G  +GG DSCQGDSGGP
Sbjct: 127 NTASSGADYPDELQCLDAPVLSQAKCEA--SYPGKITSNMFCVGFLEGGKDSCQGDSGGP 184

Query: 64  IVCD--IQG 70
           +VC+  +QG
Sbjct: 185 VVCNGQLQG 193

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A Length = 222

 Score = 84.9 bits (211), Expect = 8e-22
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 4/66 (6%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            SS +++  L+   +  LS   C    +Y   I ++MFCAG  +GG DSCQGDSGGP+VC
Sbjct: 125 MSSTADSNKLQCLNIPILSYSDCNN--SYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC 182

Query: 67  D--IQG 70
           +  +QG
Sbjct: 183 NGELQG 188

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A Length = 240

 Score = 85.0 bits (211), Expect = 1e-21
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 8   SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
              +    L+ A +  +  E C +       + +S  CAG+ + G+  C+GD GGP+VC+
Sbjct: 127 GLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCE 186

Query: 68  IQG 70
              
Sbjct: 187 QHK 189

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A Length = 247

 Score = 84.6 bits (210), Expect = 2e-21
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
            LK A++  +  + C + +    R++ +  CAG   GG DSCQGD+GGP+VC  + 
Sbjct: 152 LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKD 207

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A Length = 224

 Score = 83.7 bits (208), Expect = 2e-21
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
              S   +    L    V  +S + C K   Y   +++SM CAG      ++C GDSGGP
Sbjct: 122 TTTSPDVTFPSDLMCVDVKLISPQDCTK--VYKDLLENSMLCAGIPDSKKNACNGDSGGP 179

Query: 64  IVCD--IQG 70
           +VC   +QG
Sbjct: 180 LVCRGTLQG 188

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens} Length = 232

 Score = 83.8 bits (208), Expect = 3e-21
 Identities = 23/60 (38%), Positives = 33/60 (55%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +   +   L+ A+V  +   +C +  AY   I   M CAGS +G  D+CQGDSGGP+V 
Sbjct: 129 KNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVS 188

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2 Length = 235

 Score = 83.4 bits (207), Expect = 4e-21
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
           +   S    +  L+   +  LS E C +   Y   + D M CAG  +GG D+C GDSGGP
Sbjct: 133 STNPSEMVVSHDLQCVNIHLLSNEKCIE--TYKDNVTDVMLCAGEMEGGKDTCAGDSGGP 190

Query: 64  IVCD--IQG 70
           ++CD  +QG
Sbjct: 191 LICDGVLQG 199

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A* Length = 227

 Score = 83.0 bits (206), Expect = 5e-21
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
              S        L+   +  LSQ+ C    AY  +I D+MFCAG  + G DSCQGDSGGP
Sbjct: 126 TTKSPQVHFPKVLQCLNISVLSQKRCED--AYPRQIDDTMFCAG-DKAGRDSCQGDSGGP 182

Query: 64  IVCD--IQG 70
           +VC+  +QG
Sbjct: 183 VVCNGSLQG 191

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ... Length = 240

 Score = 82.6 bits (205), Expect = 9e-21
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            ++   A TL+ A + T+    C     +G+ +K+SM CAG   G    CQGDSGGP+ C
Sbjct: 136 RTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG-GDGVRSGCQGDSGGPLHC 194

Query: 67  DIQG 70
            + G
Sbjct: 195 LVNG 198

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G* Length = 237

 Score = 82.3 bits (204), Expect = 1e-20
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
           +I  +       L+   +  L  E+C K   Y  ++ D M CAG   GG D+C+ DSGGP
Sbjct: 135 SITPTRWQKPDDLQCVFITLLPNENCAK--VYLQKVTDVMLCAGEMGGGKDTCRDDSGGP 192

Query: 64  IVCD--IQG 70
           ++CD  +QG
Sbjct: 193 LICDGILQG 201

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2 Length = 240

 Score = 82.6 bits (205), Expect = 1e-20
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
           +           L+   +  L  E C K  A+  ++ D+M CAG   GG+ +C+ DSGGP
Sbjct: 138 STTPIKFKYPDDLQCVNLKLLPNEDCDK--AHEMKVTDAMLCAGEMDGGSYTCEHDSGGP 195

Query: 64  IVCD--IQG 70
           ++CD  +QG
Sbjct: 196 LICDGILQG 204

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C* Length = 235

 Score = 81.9 bits (203), Expect = 1e-20
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                +AL L+  RV  + + +C +  +    I ++MFCAG  +GG DSCQGDSGGP V 
Sbjct: 134 FHKGRSALVLQYLRVPLVDRATCLR--STKFTITNNMFCAGFHEGGRDSCQGDSGGPHVT 191

Query: 67  DIQG 70
           +++G
Sbjct: 192 EVEG 195

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens} Length = 238

 Score = 81.9 bits (203), Expect = 1e-20
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
           +I   + S    L+   +  L  + C+K  A+  ++ D M C G  +GG D+C GDSGGP
Sbjct: 136 SIEPENFSFPDDLQCVDLKILPNDECKK--AHVQKVTDFMLCVGHLEGGKDTCVGDSGGP 193

Query: 64  IVCD--IQG 70
           ++CD  +QG
Sbjct: 194 LMCDGVLQG 202

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens} Length = 234

 Score = 81.9 bits (203), Expect = 2e-20
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 8   SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
               N   L  A +  +S + C     +  R+++S  C         +C+GD GGP+ C 
Sbjct: 128 KGTGNDTVLNVALLNVISNQECNI--KHRGRVRESEMCTEGLLAPVGACEGDYGGPLACF 185

Query: 68  IQGC 71
               
Sbjct: 186 THNS 189

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A Length = 240

 Score = 81.9 bits (203), Expect = 2e-20
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                 +  L+   +  L    C     +   +  SM C  +       C+GDSGGP+VC
Sbjct: 129 HQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVC 188

Query: 67  D 67
            
Sbjct: 189 G 189

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B Length = 152

 Score = 79.9 bits (198), Expect = 2e-20
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
            ++  ++  L    C    A+  ++ +SM CAG   GG D+C GDSGGP++C+   QG
Sbjct: 61  EIQCVQLTLLQNTFCAD--AHPDKVTESMLCAGYLPGGKDTCMGDSGGPLICNGMWQG 116

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P* Length = 237

 Score = 81.5 bits (202), Expect = 2e-20
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
           +I          L+   +  +S + C +   +  ++   M CAG + GG  +C GDSGGP
Sbjct: 135 SIEPEEFLTPKKLQCVDLHVISNDVCAQ--VHPQKVTKFMLCAGRWTGGKSTCSGDSGGP 192

Query: 64  IVCD--IQG 70
           +VC+  +QG
Sbjct: 193 LVCNGVLQG 201

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A* Length = 223

 Score = 81.0 bits (201), Expect = 2e-20
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
             A     +  T++ A +  +S+E C    AY  +I  +M CAG  + G DSCQGDSGGP
Sbjct: 124 KTADGDFPD--TIQCAYIHLVSREECEH--AYPGQITQNMLCAGDEKYGKDSCQGDSGGP 179

Query: 64  IVCD--IQG 70
           +VC   ++G
Sbjct: 180 LVCGDHLRG 188

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys} Length = 238

 Score = 81.5 bits (202), Expect = 3e-20
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKE-DAYGTRIKDSMFCAGSFQGGADSCQGDSGG 62
            I+ +  +         +  L  E CR     +         CAG  +GG D+C+GDSGG
Sbjct: 127 RISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGG 186

Query: 63  PIVCD--IQG 70
           P++C+   QG
Sbjct: 187 PLICNGQFQG 196

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis} Length = 235

 Score = 81.1 bits (201), Expect = 3e-20
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDS 60
           +    S   +  L  A    + ++SC +   +      I D +FCAG          GD+
Sbjct: 127 STNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDA 186

Query: 61  GGPIVCD 67
           G P V +
Sbjct: 187 GDPAVQN 193

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A* Length = 252

 Score = 81.6 bits (202), Expect = 3e-20
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGA------DSCQ 57
              + S   +  LK A V       C  +      + D+M CAG  + G       D+CQ
Sbjct: 141 KHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQ 200

Query: 58  GDSGGPIVCDIQG 70
           GDSGGP+VC   G
Sbjct: 201 GDSGGPLVCLNDG 213

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2 Length = 237

 Score = 81.1 bits (201), Expect = 3e-20
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            I++ +   + TL+   +   S E C +  AY  ++ + + CA         C GDSGG 
Sbjct: 135 LISTFTNRGSGTLQCVELRLQSNEKCAR--AYPEKMTEFVLCATHRDDSGSICLGDSGGA 192

Query: 64  IVCD--IQG 70
           ++CD   QG
Sbjct: 193 LICDGVFQG 201

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2 Length = 236

 Score = 81.1 bits (201), Expect = 4e-20
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           S+    + +LK A + ++   +C     +G+ +K +M CAG   G    C GDSGGP+ C
Sbjct: 136 STGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGDSGGPLNC 193

Query: 67  DIQG 70
            + G
Sbjct: 194 QVNG 197

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A* Length = 241

 Score = 81.1 bits (201), Expect = 4e-20
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
               + AL L+   +  ++Q +C        +I   M C G   GG DSCQGDSGGP+  
Sbjct: 140 QYGGTGALILQKGEIRVINQTTCEN--LLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSS 197

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H* Length = 250

 Score = 81.2 bits (201), Expect = 4e-20
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +  +    L   ++  +    C +       + ++M CAG      D+C+GDSGGP+V 
Sbjct: 140 EAKRNRTFVLNFIKIPVVPHNECSE--VMSNMVSENMLCAGILGDRQDACEGDSGGPMVA 197

Query: 67  DIQG 70
              G
Sbjct: 198 SFHG 201

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A Length = 240

 Score = 80.7 bits (200), Expect = 4e-20
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSG 61
           A    S   + TL+   V  LS++ C  +  Y     I   M CAG  +G  DSC+GD+G
Sbjct: 132 ATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAG 191

Query: 62  GPIVCD 67
           GP++C 
Sbjct: 192 GPLICK 197

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A* Length = 372

 Score = 82.5 bits (204), Expect = 5e-20
 Identities = 30/68 (44%), Positives = 37/68 (54%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                 A  L+ ARV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC
Sbjct: 255 QYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVC 314

Query: 67  DIQGCDKG 74
           +       
Sbjct: 315 EDSISRTP 322

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A* Length = 223

 Score = 80.3 bits (199), Expect = 5e-20
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            +A+        L+   V  +S+E C K   Y      SMFCAG  Q   DSC GDSGGP
Sbjct: 125 LLANGRMPT--VLQCVNVSVVSEEVCSK--LYDPLYHPSMFCAGGGQDQKDSCNGDSGGP 180

Query: 64  IVCD--IQG 70
           ++C+  +QG
Sbjct: 181 LICNGYLQG 189

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2 Length = 241

 Score = 80.7 bits (200), Expect = 5e-20
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            ++ ++   L+  ++  +   +C K   +G+ +K +M CAG   G   SC GDSGGP+ C
Sbjct: 136 QTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAG-GDGIISSCNGDSGGPLNC 194

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A* Length = 290

 Score = 81.3 bits (201), Expect = 6e-20
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L+ ARV  +    C     Y  RI+ +  CAG  +G  D+CQGDSGGP++C
Sbjct: 154 MLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMC 205

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2 Length = 251

 Score = 79.9 bits (198), Expect = 1e-19
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            ++   A  L+      +   +C + D +GT +K++M CAG   G   +C GDSGGP+ C
Sbjct: 148 YTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAG-GDGVISACNGDSGGPLNC 206

Query: 67  DIQG 70
              G
Sbjct: 207 QADG 210

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A* Length = 231

 Score = 79.5 bits (197), Expect = 1e-19
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            I S +A+       A +  L    C+   AY   +  +  CAG  +GG D+C+GDSGGP
Sbjct: 124 TITSPNATLPDVPHCANINILDYAVCQA--AYK-GLAATTLCAGILEGGKDTCKGDSGGP 180

Query: 64  IVCD--IQG 70
           ++C+   QG
Sbjct: 181 LICNGQFQG 189

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2 Length = 225

 Score = 79.1 bits (196), Expect = 1e-19
 Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
            + S   +   TL  A V   SQ  C +  AY  +I + M CAG    GAD+CQGDSGGP
Sbjct: 127 TVTSPQENFPNTLNCAEVKIYSQNKCER--AYPGKITEGMVCAG-SSNGADTCQGDSGGP 183

Query: 64  IVCD--IQG 70
           +VCD  +QG
Sbjct: 184 LVCDGMLQG 192

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A* Length = 234

 Score = 79.1 bits (196), Expect = 1e-19
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGG 62
           +I     +       A +  L    C+    Y     +    CAG  +GG D+C GDSGG
Sbjct: 125 SITPIKVTYPDVPYCAYINLLDDAVCQA--GYPELLTEYRTLCAGILEGGKDTCGGDSGG 182

Query: 63  PIVCD--IQG 70
           P++C+   QG
Sbjct: 183 PLICNGQFQG 192

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ... Length = 241

 Score = 79.2 bits (196), Expect = 2e-19
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                 +  LK   V  + + SC+   +    I  +MFCAG      D+CQGDSGGP V 
Sbjct: 134 HEKGEQSTRLKMLEVPYVDRNSCKL--SSSFIITQNMFCAGYDTKQEDACQGDSGGPHVT 191

Query: 67  DIQG 70
             + 
Sbjct: 192 RFKD 195

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C Length = 240

 Score = 79.2 bits (196), Expect = 2e-19
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            +       L+ A + T+  E C + D +G  +K +M CAG        C GDSGGP+ C
Sbjct: 136 YTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG--DTRSGCNGDSGGPLNC 193

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A Length = 228

 Score = 78.7 bits (195), Expect = 2e-19
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           + +     +L+   +  L + +C +   +   I + + CA S     DSC+GD+GGP+VC
Sbjct: 132 NHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAES--NRRDSCKGDAGGPLVC 189

Query: 67  D 67
            
Sbjct: 190 G 190

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ... Length = 238

 Score = 78.8 bits (195), Expect = 3e-19
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                   TL+ A++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 136 KLRDKIQNTLQKAKIPLVTNEECQK-RYRGHKITHKMICAGYREGGKDACKGDSGGPLSC 194

Query: 67  DIQG 70
               
Sbjct: 195 KHNE 198

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A* Length = 234

 Score = 78.4 bits (194), Expect = 3e-19
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 8   SSASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           S+ +         +  +  + C     Y          CAG  +GG D+C GDSGGP++C
Sbjct: 129 STTTYPDVPHCTNIFIVKHKWCEP--LYPWVPADSRTLCAGILKGGRDTCHGDSGGPLIC 186

Query: 67  D--IQG 70
           +  + G
Sbjct: 187 NGEMHG 192

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A* Length = 224

 Score = 78.0 bits (193), Expect = 4e-19
 Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGG 62
           A +   +S  + L    V  +S+ +CR    YGT  I + MFCAG   GG DSCQGDSGG
Sbjct: 125 ATSEGGSSTPVNLLKVTVPIVSRATCRA--QYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182

Query: 63  PIVC 66
           PIV 
Sbjct: 183 PIVD 186

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ... Length = 97

 Score = 74.9 bits (185), Expect = 4e-19
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 4/56 (7%)

Query: 15 TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           L+ A +  LS  +C+K   +GT+IKD+M CAG    G  SC GDSGGP+VC   G
Sbjct: 6  RLQQASLPLLSNTNCKK--YWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNG 57

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2 Length = 237

 Score = 78.0 bits (193), Expect = 4e-19
 Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           S   +    L+   V  +S E CR    YG   I DSM CAG  +GG DSCQGDSGGP+ 
Sbjct: 137 SEGGNTPDVLQKVTVPLVSDEDCRA--DYGADEILDSMICAGVPEGGKDSCQGDSGGPLA 194

Query: 66  CDIQG 70
               G
Sbjct: 195 ASDTG 199

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A* Length = 241

 Score = 78.0 bits (193), Expect = 5e-19
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                    L+   +  ++ E C+K      +I   M CAG  +GG D+C+GDSGGP+VC
Sbjct: 136 KEKGEIQNILQKVNIPLVTNEECQK-RYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVC 194

Query: 67  DIQG 70
              G
Sbjct: 195 KHNG 198

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ... Length = 254

 Score = 78.1 bits (193), Expect = 6e-19
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 7   SSSASNALTLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
               + AL L    V  L  + C +   +      I + MFCAG   G  DSC+GDSGGP
Sbjct: 136 LDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGP 195

Query: 64  IVCDIQG 70
                +G
Sbjct: 196 HATHYRG 202

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A* Length = 224

 Score = 77.6 bits (192), Expect = 6e-19
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
           TL+  ++       C +   +G+       C G  +    + +GDSGGP++C+    G
Sbjct: 138 TLREVQLRVQRDRQCLR--IFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHG 193

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2 Length = 227

 Score = 77.2 bits (191), Expect = 8e-19
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
             +  +   L+   +   S+E C     +   I  +  CAG      +S  GDSGGP+VC
Sbjct: 131 GVNMPSTDKLQEVDLEVQSEEKCIA--RFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVC 188

Query: 67  D--IQG 70
           +   QG
Sbjct: 189 NGVAQG 194

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A Length = 234

 Score = 77.2 bits (191), Expect = 9e-19
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKED--AYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
            +SAS + TL+   +  + ++ C   +   +   I  +M CAGS +GG DSC GDSG P+
Sbjct: 129 HNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPL 188

Query: 65  VCD--IQG 70
           +C+   +G
Sbjct: 189 LCEGVFRG 196

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2 Length = 241

 Score = 77.3 bits (191), Expect = 1e-18
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 7   SSSASNALTLKAARVGTLSQESCRK--EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
             + +    L+ + +  ++   C        G  I D+  C     G   +C GDSGGP+
Sbjct: 136 DGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPL 195

Query: 65  VC 66
            C
Sbjct: 196 NC 197

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ... Length = 245

 Score = 76.8 bits (190), Expect = 1e-18
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
               ++A+    L+ A +  LS  +C+K   +GT+IKD+M CAG    G  SC GDSGGP
Sbjct: 143 LTRYTNANTPDRLQQASLPLLSNTNCKK--YWGTKIKDAMICAG--ASGVSSCMGDSGGP 198

Query: 64  IVCDIQG 70
           +VC   G
Sbjct: 199 LVCKKNG 205

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A Length = 224

 Score = 76.5 bits (189), Expect = 1e-18
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
               S    L  A V  +S  +CR   ++   + + M CAG      D+CQGDSGGP+  
Sbjct: 121 REGGSQQRYLLKANVPFVSDAACRSSSSFI-LVANEMICAGYDTKQEDTCQGDSGGPMFR 179

Query: 67  DIQG 70
               
Sbjct: 180 KDNA 183

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B Length = 235

 Score = 76.5 bits (189), Expect = 2e-18
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
               + A  L+ A V  LS E C++       I ++M CAG  +GG DSCQGDSGGP++C
Sbjct: 135 VYQGTTADILQEADVPLLSNERCQQ-QMPEYNITENMICAGYEEGGIDSCQGDSGGPLMC 193

Query: 67  DIQG 70
               
Sbjct: 194 QENN 197

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A* Length = 261

 Score = 75.8 bits (187), Expect = 5e-18
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 9   SASNALTLKAARVGTLSQESCRKEDAYGTR------IKDSMFCAGSFQGGADSCQGDSGG 62
           S      L+   V  +S+E+C        +      +++ M CAG  +GG D+CQGDSGG
Sbjct: 137 SLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGG 196

Query: 63  PIVCDIQG 70
           P+ C ++G
Sbjct: 197 PLSCPVEG 204

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_B Length = 251

 Score = 75.0 bits (185), Expect = 8e-18
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 15  TLKAARVGTLSQESCRK-EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
           TL    +  +   +C+K       ++   M CAG  +GG D+C GDSGGP+V   +
Sbjct: 152 TLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNR 207

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 242

 Score = 73.8 bits (182), Expect = 2e-17
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 15  TLKAARVGTLSQESCR----KEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L    +  +  + C     K       +  +M CAG   GG DSC+GDSGG +V 
Sbjct: 140 NLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 195

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A Length = 791

 Score = 75.5 bits (185), Expect = 2e-17
 Identities = 22/57 (38%), Positives = 33/57 (57%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGC 71
            LK A++  +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC  +  
Sbjct: 696 LLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDK 752

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A Length = 226

 Score = 73.3 bits (181), Expect = 3e-17
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                 + TL+  ++  +  ++C     +     +   C G+ +    + +GDSGGP++C
Sbjct: 132 GVLKPGSDTLQEVKLRLMDPQACSH---FRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLC 188

Query: 67  D--IQG 70
               QG
Sbjct: 189 AGVAQG 194

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} PDB: 3g01_A Length = 227

 Score = 72.9 bits (180), Expect = 4e-17
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +       TL   ++     + C       +  + +  C G  +    S + DSGGP+VC
Sbjct: 132 TPDGEFPKTLHEVKLTVQKDQVCES-QFQSSYNRANEICVGDSKIKGASFEEDSGGPLVC 190

Query: 67  D--IQG 70
                G
Sbjct: 191 KRAAAG 196

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} Length = 228

 Score = 72.6 bits (179), Expect = 4e-17
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIV 65
            +       LK+A++  +  + CR    YG   +   +FCA   + G     GD+G P V
Sbjct: 133 QTMDPKDHDLKSAQLTVVDLDECRT--KYGPIFLSLQVFCAQ--KVGVSLESGDAGDPTV 188

Query: 66  CD 67
             
Sbjct: 189 QQ 190

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2 Length = 242

 Score = 72.7 bits (179), Expect = 5e-17
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 15  TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L+  R+   + ++C               +MFCAG      D+CQGDSGG    
Sbjct: 143 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 197

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 74.1 bits (182), Expect = 7e-17
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                   TL+ A++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C
Sbjct: 523 KLRDKIQNTLQKAKIPLVTNEECQK-RYRGHKITHKMICAGYREGGKDACKGDSGGPLSC 581

Query: 67  DIQG 70
               
Sbjct: 582 KHNE 585

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida} Length = 238

 Score = 72.2 bits (178), Expect = 8e-17
 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQG--GADSCQGDSG 61
            I S        L+   +   +   C         I D M CA    G    DSCQGDSG
Sbjct: 131 TINSGGVCCPAVLRYVTLNITTNAFCDA-VYTSDTIYDDMICATDNTGMTDRDSCQGDSG 189

Query: 62  GPIVC 66
           GP+  
Sbjct: 190 GPLSV 194

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2 Length = 224

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
                 + TL+   +  + +++C     Y         C GS      +  GDSGGP++C
Sbjct: 132 GVRDPTSYTLREVELRIMDEKACVDYRYYEY---KFQVCVGSPTTLRAAFMGDSGGPLLC 188

Query: 67  D--IQG 70
                G
Sbjct: 189 AGVAHG 194

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2 Length = 226

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 4   AIASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGP 63
             + S+   +  L+   V  +S   C     YG  + D   C     GG  +C GDSGGP
Sbjct: 126 LPSDSALGISDVLRQVDVPIMSNADCDA--VYGI-VTDGNICID-STGGKGTCNGDSGGP 181

Query: 64  IVCD 67
           +  +
Sbjct: 182 LNYN 185

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A Length = 227

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
           TL+  ++       C   D           C G  +    S +GDSGGP+VC+   QG
Sbjct: 139 TLQEVKMTVQEDRKCES-DLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQG 195

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ... Length = 259

 Score = 71.6 bits (176), Expect = 2e-16
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
            L+   +  + +  C+   +   RI D+MFCAG         D+C+GDSGGP V 
Sbjct: 159 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 211

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2 Length = 222

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
               +    L+   +    Q+ C +      R+ DS  C  + + G  +C GDSGGP+V 
Sbjct: 129 RLGGNTPNALQEIELIVHPQKQCER--DQW-RVIDSHICTLT-KRGEGACHGDSGGPLVA 184

Query: 67  D 67
           +
Sbjct: 185 N 185

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A* Length = 329

 Score = 71.7 bits (176), Expect = 3e-16
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 15  TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L+  R+   + ++C               +MFCAG      D+CQGDSGG    
Sbjct: 232 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 286

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A* Length = 245

 Score = 70.7 bits (174), Expect = 3e-16
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 9/69 (13%)

Query: 9   SASNALTLKAARVGTLSQESCRKEDAYGTR-------IKDSMFCAGSFQGGADSCQGDSG 61
                  LK  +V  +    C  +   G         I+D M CAG+     DSCQGDSG
Sbjct: 138 PLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSG 195

Query: 62  GPIVCDIQG 70
           GP+VC + G
Sbjct: 196 GPLVCKVNG 204

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 71.3 bits (175), Expect = 6e-16
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 13  ALTLKAARVGTLSQESCR----KEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           A  L    +  +  + C     K       +  +M CAG   GG DSC+GDSGG +V 
Sbjct: 299 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVF 356

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 71.0 bits (174), Expect = 6e-16
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 15  TLKAARVGTLSQESCRK---EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L+  R+   + ++C               +MFCAG      D+CQGDSGG    
Sbjct: 300 DLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAV 354

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ... Length = 289

 Score = 70.5 bits (173), Expect = 6e-16
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
            L+   +  + +  C+   +   RI D+MFCAG         D+C+GDSGGP V 
Sbjct: 189 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 241

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens} Length = 283

 Score = 70.1 bits (172), Expect = 8e-16
 Identities = 7/56 (12%), Positives = 16/56 (28%), Gaps = 5/56 (8%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +L    V  +  E C +       +    +C         +     G  +  + +G
Sbjct: 189 SLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVVTREHRG 239

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 Length = 333

 Score = 69.4 bits (170), Expect = 2e-15
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%)

Query: 13  ALTLKAARVGTLSQESCRK-------EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIV 65
           A+ LKAAR+       C++        DA       +M CAG  + G DSC+GDSGG   
Sbjct: 224 AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAG-GEKGMDSCKGDSGGAFA 282

Query: 66  C 66
            
Sbjct: 283 V 283

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 69.5 bits (170), Expect = 2e-15
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAG---SFQGGADSCQGDSGGPIVC 66
            L+   +  + +  C+   +   RI D+MFCAG         D+C+GDSGGP V 
Sbjct: 324 VLQVVNLPIVERPVCKD--STRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 376

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 68.2 bits (167), Expect = 5e-15
 Identities = 7/56 (12%), Positives = 16/56 (28%), Gaps = 5/56 (8%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +L    V  +  E C +       +    +C         +     G  +  + +G
Sbjct: 230 SLTTRPVTLVEGEECGQ--VLNVTVTTRTYCER---SSVAAMHWMDGSVVTREHRG 280

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A* Length = 225

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 10/53 (18%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             +   V    ++ C          + +  C G        C GD G P+VC+
Sbjct: 140 FPRFVNVTVTPEDQC----------RPNNVCTGVLTRRGGICNGDGGTPLVCE 182

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia} Length = 278

 Score = 65.8 bits (161), Expect = 3e-14
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 15  TLKAARVGTLSQESCRKE-DAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
             +   V  +  E C K   A G R++ S  CAG  +   DSC GDSGGP++ 
Sbjct: 183 IKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAG-GEKAKDSCGGDSGGPLLA 234

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster} Length = 408

 Score = 66.1 bits (161), Expect = 5e-14
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            L  A V    + +C +  AY   +  S  C G      DSC+GDSGGP+  
Sbjct: 276 VLLQANVPLQPRSACSQ--AYRRAVPLSQLCVG-GGDLQDSCKGDSGGPLQA 324

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A* Length = 509

 Score = 64.6 bits (157), Expect = 2e-13
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 24  LSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           +SQE     +    R  + D   C+G  Q     C+G+SGG +  + + 
Sbjct: 399 VSQEKTMFPNLTDVREVVTDQFLCSG-TQEDESPCKGESGGAVFLERRF 446

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens} Length = 565

 Score = 64.2 bits (156), Expect = 2e-13
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTR-IKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           +L+   V  +S   C K   YG R  +  M CAG++ G  D+C+GDSGGP+VC
Sbjct: 465 SLQWGEVKLISN--CSK--FYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVC 513

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2 Length = 221

 Score = 61.8 bits (151), Expect = 5e-13
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 39  IKDSMFCAGSFQGGADSCQGDSGGPIVCD--IQG 70
            +    C    +  A  C GDSGGP++CD  IQG
Sbjct: 155 CRPHNICTFVPRRKAGICFGDSGGPLICDGIIQG 188

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia} Length = 394

 Score = 62.2 bits (151), Expect = 9e-13
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 15  TLKAARVGTLSQESCRK-----EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ 69
            LK  ++ T+ ++ C+             +  +  CAG  + G D+C GD G P+ C   
Sbjct: 283 ILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAG-GEQGKDTCTGDGGSPLFCPDP 341

Query: 70  GCD 72
              
Sbjct: 342 RNP 344

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A Length = 230

 Score = 61.1 bits (149), Expect = 1e-12
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 8   SSASNALTLKAARVGTLSQESCRKEDAYGT-RIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           ++ +    L+      +  + C +   Y    I +S  C  +   G   C GDSGGP V 
Sbjct: 132 NTDTV--ILQYTYNLVIDNDRCAQ--EYPPGIIVESTICGDT-SDGKSPCFGDSGGPFVL 186

Query: 67  D 67
            
Sbjct: 187 S 187

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497

 Score = 61.8 bits (150), Expect = 1e-12
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 15/71 (21%)

Query: 15  TLKAARVGTLSQE---SCRKEDAYGT----------RIKDSMFCAGSFQG--GADSCQGD 59
            L    V   + +   SC ++  Y             +     C G        ++C+GD
Sbjct: 372 KLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGD 431

Query: 60  SGGPIVCDIQG 70
           SGGP++   + 
Sbjct: 432 SGGPLIVHKRS 442

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A* Length = 218

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 11/61 (18%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
             +   A  L+   V  ++              + S  C       A  C GDSG P+VC
Sbjct: 131 GRNRGIASVLQELNVTVVTSL-----------CRRSNVCTLVRGRQAGVCFGDSGSPLVC 179

Query: 67  D 67
           +
Sbjct: 180 N 180

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 55.9 bits (134), Expect = 2e-10
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 31  KEDAYGTRIKDSMFCAGSFQG--GADSCQGDSGGPIVCDIQG 70
           K       +     C G        ++C+GDSGGP++   + 
Sbjct: 643 KVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRS 684

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	99.82
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	99.79
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	99.79
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	99.76
2oq5_A	232	Transmembrane protease, serine 11E; type II trans-	99.75
1z8g_A	372	Serine protease hepsin; serine protease hepsin, pr	99.74
2wph_S	235	Coagulation factor IXA heavy chain; serine proteas	99.73
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	99.73
2jkh_A	241	Activated factor XA heavy chain; plasma, calcium,	99.73
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	99.72
1yc0_A	283	Hepatocyte growth factor activator; hydrolase/inhi	99.72
3ncl_A	241	Suppressor of tumorigenicity 14 protein; proteinas	99.72
2r0l_A	248	Hepatocyte growth factor activator; serine proteas	99.72
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	99.72
2zgc_A	240	Granzyme M; serine protease, cytolysis, glycoprote	99.72
2jde_A	276	Urokinase-type plasminogen activator; plasminogen	99.72
1ddj_A	247	Plasminogen; catalytic domain, blood clotting; 2.0	99.72
3bg8_A	238	Coagulation factor XIA light chain; protease inhib	99.71
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	99.71
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	99.71
3gyl_B	261	Prostasin; ENAC, zymogen, divalent cation, channel	99.71
1elv_A	333	Complement C1S component; trypsin-like serin prote	99.71
1bru_P	241	Elastase, PPE; serine protease, hydrolase; HET: 1N	99.71
1rtf_B	252	(TC)-T-PA, two chain tissue plasminogen activator;	99.71
1pyt_D	251	TC, PCPA-TC, chymotrypsinogen C; ternary complex (	99.71
3mhw_U	247	Urokinase-type plasminogen activator; hydrolase, b	99.71
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	99.71
1aut_C	250	Activated protein C; serine proteinase, plasma cal	99.7
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	99.7
2bz6_H	254	Blood coagulation factor VIIA; serine protease, en	99.7
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.7
2any_A	241	Kininogenin, plasma kallikrein, light chain, fletc	99.7
2qy0_B	242	Complement C1R subcomponent; serine protease, beta	99.7
1md8_A	329	C1R complement serine protease; innate immunity, a	99.7
1mza_A	240	Pro-granzyme K; apoptosis, serine protease, S1 fam	99.7
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	99.7
2asu_B	234	Hepatocyte growth factor-like protein; serine prot	99.7
1fxy_A	228	Coagulation factor XA-trypsin chimera; protease, c	99.7
1gvk_B	240	Elastase 1, peptide inhibitor; hydrolase, serine p	99.7
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	99.7
1si5_H	240	Scatter factor, hepatocyte growth factor, SF, hepa	99.7
3beu_A	224	Trypsin, SGT; beta sheets, serine protease, hydrol	99.69
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	99.69
1m9u_A	241	Earthworm fibrinolytic enzyme; hydrolase, serine p	99.69
1spj_A	238	Kallikrein 1; serine protease, KLK1, HK1, hydrolas	99.69
2bdg_A	223	Kallikrein-4; serine proteinase, S1 subsite, 70-80	99.69
2zch_P	237	Prostate-specific antigen; human PSA, kallikrein r	99.69
1orf_A	234	Granzyme A; hydrolase-hydrolase inhibitor complex;	99.68
3mfj_A	223	Cationic trypsin; serine proteinase, hydrolase; 0.	99.68
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	99.68
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.68
1ym0_A	238	Fibrinotic enzyme component B; two chains, glycosy	99.68
1lo6_A	223	Kallikrein 6, HK6; serine protease, human kallikre	99.68
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	99.67
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	99.67
1ao5_A	237	Glandular kallikrein-13; serine protease, protein	99.67
1fon_A	240	Procarboxypeptidase A-S6; truncated zymogen E, ser	99.67
2psx_A	227	Kallikrein-5; zinc inhibition, stratum corneum, gl	99.67
2aiq_A	231	Protein C activator; snake venom serine proteinase	99.67
1t8o_A	245	Chymotrypsin A; chymotrypsin, serine proteinase, B	99.67
2f9n_A	245	Alpha I tryptase; serine proteinase, trypsin-like,	99.67
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	99.67
1elt_A	236	Elastase; serine proteinase; 1.61A {Salmo salar} S	99.67
1ton_A	235	Tonin; hydrolase(serine proteinase); 1.80A {Rattus	99.66
1gvz_A	237	Kallikrein-1E2; antigen, prostate specific antigen	99.66
4i8h_A	223	Cationic trypsin, beta-trypsin; serine protease, h	99.66
2b9l_A	394	Prophenoloxidase activating factor; CLIP domain, e	99.66
1npm_A	225	Neuropsin; serine proteinase, glycoprotein; HET: N	99.66
2qxi_A	224	Kallikrein-7; S1 pocket, chloromethyl ketone, alte	99.65
3s69_A	234	Thrombin-like enzyme defibrase; beta-barrel, serin	99.65
2xw9_A	228	Complement factor D; immune system, hydrolase, ser	99.65
1sgf_A	240	7S NGF, nerve growth factor; growth factor (beta-N	99.65
1iau_A	227	Granzyme B; hydrolase-hydrolase inhibitor complex;	99.65
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	99.64
1euf_A	227	Duodenase; serine protease, dual specificity, hydr	99.64
2xxl_A	408	GRAM-positive specific serine protease, isoform B;	99.63
1cgh_A	224	Cathepsin G; inflammation, specificity, serine pro	99.63
4ag1_A	226	Chymase; hydrolase-de novo protein complex, inhibi	99.63
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	99.63
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	99.62
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	99.61
1azz_A	226	Collagenase; complex (serine protease/inhibitor),	99.61
3rp2_A	224	RAT MAST cell protease II; serine proteinase; 1.90	99.6
4dur_A	791	Plasminogen, serine protease; fibrinolysis, hydrol	99.59
1a7s_A	225	Heparin binding protein; serine protease homolog,	99.57
2hlc_A	230	Collagenase; serine protease, hydrolase, collagen	99.57
1rrk_A	497	Complement factor B; BB, hydrolase; 2.00A {Homo sa	99.56
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	99.52
2z7f_E	218	Leukocyte elastase; serine protease, serine protea	99.51
2xrc_A	565	Human complement factor I; immune system, hydrolas	99.5
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.47
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.44
1fuj_A	221	PR3, myeloblastin; hydrolase, serine protease, gly	99.43
2odp_A	509	Complement C2; C3/C5 convertase, complement serin	99.42
1p3c_A	215	Glutamyl-endopeptidase; serine protease, hydrolase	98.92
1arb_A	268	Achromobacter protease I; hydrolase(serine proteas	98.67
2qa9_E	185	Streptogrisin-B; chymotrypsin-type serine peptidas	98.3
2vid_A	204	Serine protease SPLB; hydrolase; 1.80A {Staphyloco	97.7
3cp7_A	218	Alkaline serine protease Al20; trypsin-like, hydro	97.69
1wcz_A	268	Glutamyl endopeptidase; virulence factor, hydrolas	97.63
2w7s_A	200	Serine protease SPLA; hydrolase, family S1; 1.80A	97.6
2o8l_A	274	V8 protease, taphylococcal serine; serine protease	97.58
2sga_A	181	Proteinase A; hydrolase (serine proteinase); 1.50A	97.26
1agj_A	242	Epidermolytic toxin A; hydrolase, serine protease;	96.45
1hpg_A	187	Glutamic acid specific protease; serine protease,	96.18
2as9_A	210	Serine protease; trypsin-like fold, hydrolase; 1.7	95.94
1qtf_A	246	Exfoliative toxin B; serine protease, superantigen	94.99
2pfe_A	186	Protease A, alkaline serine protease, TFPA; beta-b	92.58
2ea3_A	189	Chymotrypsin; celloulomonas, protease, hydrolase;	92.44
3k6y_A	237	Serine protease, possible membrane-associated seri	92.12
1lcy_A	325	HTRA2 serine protease; apoptosis, PDZ domain, casp	92.01
1fiw_A	290	Beta-acrosin heavy chain; anti-parallel beta-barre	91.65
1y8t_A	324	Hypothetical protein RV0983; serine protease, stru	91.41
1l1j_A	239	Heat shock protease HTRA; hydrolase, serine protei	91.39
4e7n_A	238	Snake-venom thrombin-like enzyme; beta-barrel, hyd	89.62
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	88.31
3tjo_A	231	Serine protease HTRA1; peptidase, hydrolase; HET:	87.76
1te0_A	318	Protease DEGS; two domains, serine protease, PDZ,	87.7
3gov_B	251	MAsp-1; complement, serine protease, beta barrel,	86.86
3lgi_A	237	Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydro	86.61
2vnt_A	276	Urokinase-type plasminogen activator; UPA, inhibit	86.31
1eq9_A	222	Chymotrypsin; FIRE ANT, serine proteinase, hydrola	86.08
2aiq_A	231	Protein C activator; snake venom serine proteinase	85.34
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	85.0
2pka_B	152	Kallikrein A; serine proteinase; 2.05A {Sus scrofa	84.6
2bdy_A	289	Thrombin; thrombin, complex structure, hydrolase,	84.17
3qo6_A	348	Protease DO-like 1, chloroplastic; protease, HTRA,	83.96
3h7t_A	235	Group 3 allergen smipp-S YVT004A06; hydrolase; 2.0	83.84
3h7o_A	228	Group 3 allergen smipp-S YV6023A04; hydrolase; 1.8	83.48
2oua_A	188	Serine protease, protein NAPA; kinetic stability,	83.43
1yph_E	97	Chymotrypsin A, chain C; serine protease, hydrolas	83.36
3rm2_H	259	Thrombin heavy chain; serine protease, kringle, hy	83.2
1elv_A	333	Complement C1S component; trypsin-like serin prote	83.01
3s9c_A	234	Vipera russelli proteinase RVV-V gamma; serine pro	82.3
3tvj_B	242	Mannan-binding lectin serine protease 2 B chain; i	81.96
4dgj_A	235	Enteropeptidase catalytic light chain; serine prot	81.44
1pq7_A	224	Trypsin; ultra-high resolution, catalysis, hydrola	81.05
3fzz_A	227	Granzyme C; hydrolase, cytolysis, protease, serine	80.66
2olg_A	278	Pro-phenoloxidase activating enzyme-I; prophenolox	80.53
2f91_A	237	Hepatopancreas trypsin; trypsin, canonical inhibit	80.32
1hj8_A	222	Trypsin I; hydrolase, radiation damage, disulphide	80.13

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=99.82  E-value=1.2e-20  Score=116.22  Aligned_cols=86  Identities=35%  Similarity=0.586  Sum_probs=72.5

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .++.||++.++++++++|++.|  ...+.++||||+  ..+.+.|.|||||||++...+  .+++.||+|++..|.    
T Consensus         3 ~~~~L~~~~v~i~~~~~C~~~~--~~~i~~~~iCa~--~~~~~~C~GDSGGPL~~~~~~--~~~l~GIvS~g~~c~~~~~   76 (97)
T 1yph_E            3 TPDRLQQASLPLLSNTNCKKYW--GTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNG--AWTLVGIVSWGSSTCSTST   76 (97)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHH--GGGCCTTEEEEE--CSSCBCCTTCTTCEEEEEETT--EEEEEEEEEECCTTCCTTS
T ss_pred             cCccceEEEEEECCHHHhhHHh--cCCCCCceEeec--CCCCCCCcCCCCCcEEEEeCC--eEEEEEEEEeCCCCCCCCC
Confidence            4678999999999999999854  345789999998  456789999999999998743  467899999987652    


Q ss_pred             --eeeeccccceecceec
Q psy1243          88 --VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~  103 (121)
                        +|++|..|.+||...+
T Consensus        77 p~vyt~V~~y~~WI~~~~   94 (97)
T 1yph_E           77 PGVYARVTALVNWVQQTL   94 (97)
T ss_dssp             EEEEEEHHHHHHHHHHHH
T ss_pred             CeEEEEHHHhHHHHHHHH
Confidence              9999999999998654

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=99.79  E-value=2.6e-19  Score=129.07  Aligned_cols=92  Identities=27%  Similarity=0.520  Sum_probs=77.9

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..||++.+++++.++|+..+.+...+.+.||||+...++.+.|+|||||||+|.....+.+++.||+|++..|.    
T Consensus       151 ~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~  230 (290)
T 1fiw_A          151 TSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKR  230 (290)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTB
T ss_pred             CCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCC
Confidence            4678999999999999999754445568899999996566789999999999999875445678999999998774    


Q ss_pred             --eeeeccccceecceec
Q psy1243          88 --VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~  103 (121)
                        +|++|..|.+||...+
T Consensus       231 p~vyt~V~~y~~WI~~~~  248 (290)
T 1fiw_A          231 PGVYTSTWSYLNWIASKI  248 (290)
T ss_dssp             CEEEEESGGGHHHHHHHH
T ss_pred             CeEEEEHHHhHHHHHHHh
Confidence              8999999999997666

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=99.79  E-value=1.6e-19  Score=133.30  Aligned_cols=96  Identities=19%  Similarity=0.280  Sum_probs=81.9

Q ss_pred             CCCccccccceEEEeccChhhhcccccC---------------CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAY---------------GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCD   72 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~---------------~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~   72 (121)
                      ..+..+..||++.++++++++|++.|..               ...++++|||||...++.++|+|||||||++.+...+
T Consensus       229 ~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~  308 (347)
T 4f4o_C          229 ANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDD  308 (347)
T ss_dssp             TTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTT
T ss_pred             CCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCC
Confidence            3456788999999999999999876532               1247889999997777899999999999999887767


Q ss_pred             cCceeEEEEeCCCcc-----eeeeccccceecceec
Q psy1243          73 KGASLGTDRLSRACY-----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        73 ~~~~~g~~~v~~~~~-----wi~~v~~~~~wi~~~~  103 (121)
                      .+++.||+|++..|.     +|++|..|.+||...+
T Consensus       309 ~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i  344 (347)
T 4f4o_C          309 TWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTTI  344 (347)
T ss_dssp             EEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHHH
T ss_pred             EEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence            789999999998874     9999999999998765

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=99.76  E-value=9.9e-19  Score=115.29  Aligned_cols=86  Identities=27%  Similarity=0.568  Sum_probs=72.6

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~--   87 (121)
                      ..+..||++.+++++.++|++.  +...+.++||||+...++.+.|.|||||||++.+      .+.||+|++ ..|.  
T Consensus        57 ~~~~~L~~~~~~i~~~~~C~~~--~~~~~~~~~iCa~~~~~~~~~C~GDsGgPL~~~g------~l~Gi~S~g~~~C~~~  128 (152)
T 2pka_B           57 EFPDEIQCVQLTLLQNTFCADA--HPDKVTESMLCAGYLPGGKDTCMGDSGGPLICNG------MWQGITSWGHTPCGSA  128 (152)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHH--CSSBCCTTEEEEECTTSSCBCCTTCTTCEEEETT------EEEEEECCCCSSTTCT
T ss_pred             CCCccceEEEeEEcCHHHhhhh--hcCCCCCCEEeeccCCCCCcccCCccccceEECC------EEEEEEecCCCCCCCC
Confidence            5678999999999999999985  4456789999999655678999999999999952      479999998 6663  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|++|..|.+||...+.
T Consensus       129 ~~p~vyt~V~~y~~WI~~~~~  149 (152)
T 2pka_B          129 NKPSIYTKLIFYLDWIDDTIT  149 (152)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHhc
Confidence                89999999999987653

>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}

Probab=99.75  E-value=3.5e-18  Score=119.11  Aligned_cols=94  Identities=29%  Similarity=0.516  Sum_probs=78.1

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.+.|++.+.+...+.+.||||+...++.+.|.|||||||++.+.+ +.+++.||+|++..|. 
T Consensus       131 ~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~-~~~~l~GI~S~g~~C~~  209 (232)
T 2oq5_A          131 DGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDAR-DIWYLAGIVSWGDECAK  209 (232)
T ss_dssp             TCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECTT-SCEEEEEEEEECSSSSB
T ss_pred             CCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCCCCcEEEECCC-CCEEEEEEEEeCCCCCC
Confidence            45567889999999999999998654555688999999965566799999999999997543 3467899999997774 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       210 ~~~p~vyt~V~~~~~WI~~~~  230 (232)
T 2oq5_A          210 PNKPGVYTRVTALRDWITSKT  230 (232)
T ss_dssp             TTBCEEEEETGGGHHHHHHHH
T ss_pred             CCCCeEEEEhHHhHHHHHHHh
Confidence                 8999999999998654

>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*

Probab=99.74  E-value=7e-18  Score=125.39  Aligned_cols=96  Identities=36%  Similarity=0.603  Sum_probs=80.3

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeC--CcccCceeEEEEeCCCc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ--GCDKGASLGTDRLSRAC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~--~~~~~~~~g~~~v~~~~   86 (121)
                      ++..+..|+++.+++++.+.|+....+...+.++||||+...++.++|+|||||||+|...  ....+++.||+|++..|
T Consensus       257 ~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C  336 (372)
T 1z8g_A          257 YGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGC  336 (372)
T ss_dssp             TSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSS
T ss_pred             CCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCC
Confidence            4566789999999999999999754455568899999997666789999999999999864  23456789999999877


Q ss_pred             c------eeeeccccceecceecc
Q psy1243          87 Y------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~~  104 (121)
                      .      +|++|..|.+||...+.
T Consensus       337 ~~~~~p~vyt~V~~y~~WI~~~i~  360 (372)
T 1z8g_A          337 ALAQKPGVYTKVSDFREWIFQAIK  360 (372)
T ss_dssp             SCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHHHHHHHHHHh
Confidence            4      99999999999987774

>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*

Probab=99.73  E-value=8.9e-18  Score=117.14  Aligned_cols=93  Identities=32%  Similarity=0.601  Sum_probs=77.8

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..||++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||++..++  .+++.||+|++..|.
T Consensus       135 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~--~~~l~GI~S~g~~C~  210 (235)
T 2wph_S          135 HKGRSALVLQYLRVPLVDRATCLRS--TKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG--TSFLTGIISWGEECA  210 (235)
T ss_dssp             TTSCBCSBCEEEEEEEECHHHHHHT--CSSCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSS
T ss_pred             CCCCccchheEeeeeeeCHHHhcCc--ccCCCCCCEEEeCCCCCCCccCCCCCCCceEEeECC--eEEEEEEEEECCCCC
Confidence            3456678999999999999999984  344578999999865667899999999999998654  357899999998774


Q ss_pred             ------eeeeccccceecceecc
Q psy1243          88 ------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~~  104 (121)
                            +|+++..|.+||...+.
T Consensus       211 ~~~~p~vyt~V~~~~~WI~~~~~  233 (235)
T 2wph_S          211 MKGKYGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHCC
T ss_pred             CCCCCeEEEEHHHhHHHHHHHHh
Confidence                  89999999999987664

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=99.73  E-value=7.8e-18  Score=117.73  Aligned_cols=92  Identities=30%  Similarity=0.493  Sum_probs=76.2

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..||++.+++++.++|++.+. ...+.+.||||+....+.+.|.|||||||++...  +.+++.||+|++..|.
T Consensus       138 ~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~--~~~~l~Gi~S~g~~C~  214 (237)
T 2f91_A          138 EGGNTPDVLQKVTVPLVSDEDCRADYG-ADEILDSMICAGVPEGGKDSCQGDSGGPLAASDT--GSTYLAGIVSWGYGCA  214 (237)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHHHC-TTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTT--SSCEEEEEEEEESSSS
T ss_pred             CCCCccceeeEEEEeEcCHHHhhhhhC-CCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecC--CCEEEEEEEEecCCCC
Confidence            345667899999999999999998643 2347889999986556789999999999999754  3467899999987774


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            +|+++..|.+||...
T Consensus       215 ~~~~p~vyt~V~~~~~WI~~~  235 (237)
T 2f91_A          215 RPGYPGVYTEVSYHVDWIKAN  235 (237)
T ss_dssp             CTTCCEEEEEGGGSHHHHHHH
T ss_pred             CCCCCcEEEEHHHhHHHHHHh
Confidence                  899999999999754

>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...

Probab=99.73  E-value=1e-17  Score=117.36  Aligned_cols=94  Identities=27%  Similarity=0.441  Sum_probs=78.1

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.+.|+..  +...+.+.||||+....+.+.|.|||||||++..++  .+++.||+|++..|.
T Consensus       135 ~~~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~--~~~l~GI~S~g~~C~  210 (241)
T 2jkh_A          135 EKGEQSTRLKMLEVPYVDRNSCKLS--SSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKD--TYFVTGIVSWGEGCA  210 (241)
T ss_dssp             TTSCBCSBCEEEEEEEECHHHHHHH--CSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETT--EEEEEEEEEECSSSS
T ss_pred             CCCCcCccccEeeeccccHHHhccc--ccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECC--EEEEEEEEEECCCCC
Confidence            3455678899999999999999984  344578999999865567789999999999998654  457899999998773


Q ss_pred             ------eeeeccccceecceeccc
Q psy1243          88 ------VLSKMIRFYASVGIEATS  105 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~~~  105 (121)
                            +|+++..|.+||...+..
T Consensus       211 ~~~~p~vyt~V~~~~~WI~~~~~~  234 (241)
T 2jkh_A          211 RKGKYGIYTKVTAFLKWIDRSMKT  234 (241)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred             CCCCceEEEEhHHHHHHHHHHhcc
Confidence                  899999999999987753

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=99.72  E-value=7.5e-18  Score=121.13  Aligned_cols=90  Identities=24%  Similarity=0.458  Sum_probs=75.5

Q ss_pred             ccccceEEEeccChhhhcccccCCCCcCCCeEEEeecC---CCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQ---GGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~---~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +..|+++.+++++.+.|++.+  ...+.++||||+...   .+.++|+|||||||+|.....+.+++.||+|++..|.  
T Consensus       187 ~~~L~~~~v~i~~~~~C~~~~--~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~  264 (289)
T 2bdy_A          187 PSVLQVVNLPIVERPVCKDST--RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  264 (289)
T ss_dssp             CSBCEEEEEEBCCHHHHHHTC--SSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             cccceEEEEEEECHHHhhccc--cCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCC
Confidence            678999999999999999843  445789999998532   3678999999999999875445678999999998774  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|++|..|.+||...+.
T Consensus       265 ~~p~vyt~V~~y~~WI~~~i~  285 (289)
T 2bdy_A          265 GKYGFYTHVFRLKKWIQKVID  285 (289)
T ss_dssp             TCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHHH
Confidence                89999999999986653

>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A

Probab=99.72  E-value=1.2e-17  Score=119.64  Aligned_cols=91  Identities=29%  Similarity=0.598  Sum_probs=77.0

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.++|+..+.+...+.+.||||+...++.+.|.|||||||++..++  .+++.||+|++..|.    
T Consensus       178 ~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g--~~~l~GIvS~g~~C~~~~~  255 (283)
T 1yc0_A          178 YSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNG--VAYLYGIISWGDGCGRLHK  255 (283)
T ss_dssp             CCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSTTTCTTC
T ss_pred             cCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECC--cEEEEEEEEECCCCCCCCC
Confidence            57889999999999999997543444578999999865567899999999999998754  457899999998774    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       256 p~vyt~V~~y~~WI~~~i~  274 (283)
T 1yc0_A          256 PGVYTRVANYVDWINDRIR  274 (283)
T ss_dssp             CEEEEEGGGGHHHHHHHCC
T ss_pred             CeEEEEhhhHHHHHHHHhc
Confidence              89999999999988775

>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*

Probab=99.72  E-value=1.7e-17  Score=115.84  Aligned_cols=93  Identities=27%  Similarity=0.502  Sum_probs=78.1

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.+.|+..  +...+.+.||||+...++.+.|.|||||||+|...+ +.+++.||+|++..|.
T Consensus       141 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~-g~~~l~Gi~S~g~~c~  217 (241)
T 3ncl_A          141 YGGTGALILQKGEIRVINQTTCENL--LPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEAD-GRIFQAGVVSWGDGCA  217 (241)
T ss_dssp             TTSCBCSBCEEEEEEECCHHHHHHH--STTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTT-SCEEEEEEEEECSSSS
T ss_pred             CCCCcCceeeEEeEEEECHHHhhhh--cccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCC-CcEEEEEEEEECCCCC
Confidence            3455678899999999999999984  556688999999976778899999999999987543 3567899999998774


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       218 ~~~~p~vyt~v~~y~~WI~~~~  239 (241)
T 3ncl_A          218 QRNKPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             CTTCCEEEEESGGGHHHHHHHH
T ss_pred             CCCCCeEEEEHHHHHHHHHHHh
Confidence                  8999999999998765

>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*

Probab=99.72  E-value=1.4e-17  Score=116.94  Aligned_cols=91  Identities=29%  Similarity=0.598  Sum_probs=76.8

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.+.|+..+.+...+.+.||||+....+.+.|.|||||||++..++  .+++.||+|++..|.    
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g--~~~l~GI~S~g~~C~~~~~  220 (248)
T 2r0l_A          143 YSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNG--VAYLYGIISWGDGCGRLHK  220 (248)
T ss_dssp             CCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSTTTCTTC
T ss_pred             CCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECC--cEEEEEEEEeCCCCCCCCC
Confidence            47889999999999999997543444578999999865567899999999999998744  457899999998774    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       221 p~vyt~V~~~~~WI~~~~~  239 (248)
T 2r0l_A          221 PGVYTRVANYVDWINDRIR  239 (248)
T ss_dssp             CEEEEEGGGGHHHHHHHHC
T ss_pred             CcEEEEHHHHHHHHHHHhc
Confidence              89999999999988775

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=99.72  E-value=1.3e-17  Score=116.72  Aligned_cols=95  Identities=26%  Similarity=0.383  Sum_probs=79.4

Q ss_pred             CccccccceEEEeccChhhhcccccC-CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~-~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      +..+..|+++.+++++.+.|++.+.. ...+.+.||||+...++.+.|.|||||||++.+..-+.+++.||+|++..|. 
T Consensus       147 ~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~  226 (251)
T 3gov_B          147 QRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGK  226 (251)
T ss_dssp             SCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSC
T ss_pred             CCCCccceEEeeEEECHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCC
Confidence            34678999999999999999986532 2457899999986666789999999999999865555678999999998774 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       227 ~~~p~vyt~V~~~~~WI~~~~~  248 (251)
T 3gov_B          227 KDRYGVYSYIHHNKDWIQRVTG  248 (251)
T ss_dssp             SSCCEEEEETTTTHHHHHHHHC
T ss_pred             CCCCEEEEEHHHhHHHHHHHhc
Confidence                 89999999999986653

>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A

Probab=99.72  E-value=2.1e-17  Score=116.02  Aligned_cols=93  Identities=22%  Similarity=0.418  Sum_probs=75.6

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RAC   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~   86 (121)
                      .++..+..|+++.+++++.++|++...+...+.+.||||+....+.+.|.|||||||+|.+.    +++.||+|++ ..|
T Consensus       130 ~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~----~~l~Gi~S~g~~~C  205 (240)
T 2zgc_A          130 QGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKG----RVLAGVLSFSSRVC  205 (240)
T ss_dssp             TTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCTTCEEEETTT----TEEEEEECCCCSST
T ss_pred             CCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCccCeeEECCC----CEEEEEEEECCCCC
Confidence            34567789999999999999998732234457889999986555788999999999999642    5789999998 556


Q ss_pred             c------eeeeccccceecceecc
Q psy1243          87 Y------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~~  104 (121)
                      .      +|+++..|.+||...+.
T Consensus       206 ~~~~~p~vyt~V~~y~~WI~~~~~  229 (240)
T 2zgc_A          206 TDIFKPPVATAVAPYVSWIRKVTG  229 (240)
T ss_dssp             TCTTSCCEEEESGGGHHHHHHHHC
T ss_pred             CCCCCCcEEEEHHHhHHHHHHHHh
Confidence            3      89999999999987664

>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A

Probab=99.72  E-value=1.6e-17  Score=116.92  Aligned_cols=90  Identities=31%  Similarity=0.570  Sum_probs=74.9

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.+.|++.......+.+.||||+...++.+.|.|||||||++...+  .+++.||+|++..|.    
T Consensus       149 ~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~--~~~l~GI~S~g~~C~~~~~  226 (247)
T 1ddj_A          149 GAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKD--KYILQGVTSWGLGCARPNK  226 (247)
T ss_dssp             TTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEECSS--SEEEEEEECGGGCCBBTTB
T ss_pred             CCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcEEEEECC--cEEEEEEEEECCCCCCCCC
Confidence            46789999999999999987433344578999999865567899999999999998654  467899999987773    


Q ss_pred             --eeeeccccceecceec
Q psy1243          88 --VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~  103 (121)
                        +|+++..|.+||...+
T Consensus       227 p~vyt~V~~y~~WI~~~~  244 (247)
T 1ddj_A          227 PGVYVRVSRFVTWIEGVM  244 (247)
T ss_dssp             CEEEEEGGGSHHHHHHHH
T ss_pred             CEEEEEhHHhHHHHHHHh
Confidence              8999999999998654

>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...

Probab=99.71  E-value=1.5e-17  Score=116.41  Aligned_cols=93  Identities=28%  Similarity=0.570  Sum_probs=76.9

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.++|++.|. ...+.+.||||+...++.+.|.|||||||+|..++  .+++.||+|++..|. 
T Consensus       138 ~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~--~~~l~GI~S~g~~C~~  214 (238)
T 3bg8_A          138 RDKIQNTLQKAKIPLVTNEECQKRYR-GHKITHKMICAGYREGGKDACKGDSGGPLSCKHNE--VWHLVGITSWGEGCAQ  214 (238)
T ss_dssp             SCCCCSBCEEEECCEECHHHHHHHCT-TSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSC
T ss_pred             CCChhhhhcEeeEEEECHHHhhhhhc-CCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECC--eEEEEEEEEECCCCCC
Confidence            34467889999999999999998543 23478999999865567899999999999998754  457899999998773 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       215 ~~~p~vyt~V~~y~~WI~~~~~  236 (238)
T 3bg8_A          215 RERPGVYTNVVEYVDWILEKTQ  236 (238)
T ss_dssp             TTCCEEEEEGGGGHHHHHHHHS
T ss_pred             CCCCcEEEeHHHHHHHHHHHHh
Confidence                 89999999999987653

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=99.71  E-value=2.8e-17  Score=117.36  Aligned_cols=92  Identities=24%  Similarity=0.427  Sum_probs=75.3

Q ss_pred             CccccccceEEEeccChhhhcccccC-CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~-~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      +..+..|+++.+++++.++|++.|.. ...+.++||||+. ..+.++|+|||||||++...+ +.+++.||+|++..|. 
T Consensus       178 ~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGGPL~~~~~~-~~~~l~GIvS~g~~C~~  255 (278)
T 2olg_A          178 GQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGG-EKAKDSCGGDSGGPLLAERAN-QQFFLEGLVSFGATCGT  255 (278)
T ss_dssp             CCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECC-TTCTTCCCCCTTCEEEEEEGG-GEEEEEEEEEECCBCST
T ss_pred             CCccchhhcccccccCHHHHHHHhccccccCCCceEeeec-CCCCeeCCCccCcceEEEcCC-CcEEEEEEEEECCCCCC
Confidence            44678899999999999999986532 2347899999985 446899999999999997422 3467899999997774 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       256 ~~~p~vyt~V~~y~~WI~~~i  276 (278)
T 2olg_A          256 EGWPGIYTKVGKYRDWIEGNI  276 (278)
T ss_dssp             TCBCEEEEEGGGGHHHHHTTC
T ss_pred             CCCCcEEeEHHHHHHHHHHhh
Confidence                 8999999999998654

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=99.71  E-value=2.5e-17  Score=114.69  Aligned_cols=92  Identities=34%  Similarity=0.579  Sum_probs=77.4

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.++|++.+. ...+.++||||+...++.+.|.|||||||+|..++  .+++.||+|++..|.
T Consensus       136 ~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~--~~~l~Gi~S~g~~c~  212 (235)
T 4dgj_A          136 YQGTTADILQEADVPLLSNERCQQQMP-EYNITENMICAGYEEGGIDSCQGDSGGPLMCQENN--RWFLAGVTSFGYECA  212 (235)
T ss_dssp             TTCCBCSBCEEEEEEEECHHHHHHHCT-TSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSS
T ss_pred             CCCccchhheEeEeeecCHHHhhhhcc-CccCCCCeEeecCCCCCCccCCCCCCCeEEEEECC--cEEEEEEEEEcCCCC
Confidence            445678899999999999999998542 23578999999876677899999999999998765  457899999997774


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            +|+++..|.+||...
T Consensus       213 ~~~~p~vyt~V~~~~~WI~~~  233 (235)
T 4dgj_A          213 LPNRPGVYARVSRFTEWIQSF  233 (235)
T ss_dssp             CTTCCEEEEEGGGTHHHHHTT
T ss_pred             CCCCCEEEeeHHHHHHHHHHH
Confidence                  899999999999754

>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*

Probab=99.71  E-value=1.3e-17  Score=117.64  Aligned_cols=92  Identities=29%  Similarity=0.516  Sum_probs=77.2

Q ss_pred             ccccceEEEeccChhhhcccccC------CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAY------GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~------~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      +..|+++.+++++.+.|+..|..      ...+.++||||+....+.+.|.|||||||+|..++  .+++.||+|++..|
T Consensus       141 ~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~--~~~lvGI~S~g~~c  218 (261)
T 3gyl_B          141 PKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEG--LWYLTGIVSWGDAC  218 (261)
T ss_dssp             TCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETT--EEEEEEEECCCCCS
T ss_pred             CccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCC--EEEEEEEEecCCCC
Confidence            67899999999999999986542      23578999999866677899999999999998754  45789999999776


Q ss_pred             c------eeeeccccceecceecccc
Q psy1243          87 Y------VLSKMIRFYASVGIEATSS  106 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~~~s  106 (121)
                      .      +|+++..|.+||...+...
T Consensus       219 ~~~~~p~vyt~v~~~~~WI~~~i~~~  244 (261)
T 3gyl_B          219 GARNRPGVYTLASSYASWIQSKVTEL  244 (261)
T ss_dssp             SCTTCCEEEEEGGGGHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEHHHhHHHHHHHHhhc
Confidence            3      8999999999999887533

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=99.71  E-value=2e-17  Score=121.06  Aligned_cols=93  Identities=25%  Similarity=0.384  Sum_probs=76.0

Q ss_pred             ccccccceEEEeccChhhhcccccCC-------CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcc-cCceeEEEEe
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYG-------TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCD-KGASLGTDRL   82 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~-------~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~-~~~~~g~~~v   82 (121)
                      ..+..||++.+++++.+.|++.+...       ..+.++||||+... +.++|+|||||||++....-+ .+++.||+|+
T Consensus       222 ~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~Cag~~~-~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~  300 (333)
T 1elv_A          222 DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEK-GMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSW  300 (333)
T ss_dssp             SSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEECST-TCBCCTTCTTCEEEEECSSCTTCEEEEEEEEE
T ss_pred             CcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeECccCCC-CCCcCcCcCCCceEEEECCCCcEEEEEEEEee
Confidence            46788999999999999999854321       24789999999644 789999999999999864333 6789999999


Q ss_pred             CCCcc---eeeeccccceecceecc
Q psy1243          83 SRACY---VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        83 ~~~~~---wi~~v~~~~~wi~~~~~  104 (121)
                      +..|.   +|++|..|.+||...+.
T Consensus       301 g~~C~~~~vyt~V~~y~~WI~~~~~  325 (333)
T 1elv_A          301 GPQCGTYGLYTRVKNYVDWIMKTMQ  325 (333)
T ss_dssp             CSSTTSEEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCCcEEeEHHHHHHHHHHHHh
Confidence            98774   99999999999988775

>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2

Probab=99.71  E-value=2.2e-17  Score=115.76  Aligned_cols=94  Identities=23%  Similarity=0.508  Sum_probs=76.4

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--C
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--A   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~   85 (121)
                      .++..+..||++.+++++.++|++.+.+...+.+.||||+. .++.+.|.|||||||+|...+ +.+.+.||+|++.  .
T Consensus       137 ~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~-g~~~l~Gi~S~g~~~~  214 (241)
T 1bru_P          137 TNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGAN-GQWQVHGIVSFGSSLG  214 (241)
T ss_dssp             TTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTT-SCEEEEEEEEECBTTB
T ss_pred             CCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecC-CCCCccCCCCCCCcEEEECCC-CCEEEEEEEEEcCCCC
Confidence            34456789999999999999999854344457899999983 567799999999999998632 3467899999986  5


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|+++..|.+||...+
T Consensus       215 C~~~~~p~vyt~V~~~~~WI~~~i  238 (241)
T 1bru_P          215 CNYYHKPSVFTRVSNYIDWINSVI  238 (241)
T ss_dssp             SSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCCcEEEEHHHhHHHHHHHH
Confidence            53      8999999999997654

>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*

Probab=99.71  E-value=3.7e-17  Score=114.93  Aligned_cols=90  Identities=30%  Similarity=0.562  Sum_probs=74.4

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCC------CCCccCCCcceEEEeeCCcccCceeEEEEeCCC
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGG------ADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA   85 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~------~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~   85 (121)
                      .+..|+++.+++++.+.|+..+.....+.++||||+....+      .+.|.|||||||+|..++  .+++.||+|++..
T Consensus       149 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~--~~~l~Gi~S~g~~  226 (252)
T 1rtf_B          149 YSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDG--RMTLVGIISWGLG  226 (252)
T ss_dssp             CCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSS
T ss_pred             ccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCC--cEEEEEEEEEcCC
Confidence            56889999999999999998654455678999999854433      789999999999998654  4578999999987


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|+++..|.+||...+
T Consensus       227 C~~~~~p~vyt~V~~y~~WI~~~~  250 (252)
T 1rtf_B          227 CGQKDVPGVYTKVTNYLDWIRDNM  250 (252)
T ss_dssp             SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHhc
Confidence            73      8999999999998654

>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2

Probab=99.71  E-value=3.4e-17  Score=115.44  Aligned_cols=93  Identities=26%  Similarity=0.574  Sum_probs=76.4

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--C
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--A   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~   85 (121)
                      .++..+..|+++.+++++.+.|+..+.+...+.+.||||+. .++.+.|.|||||||+|..++  .+++.||+|++.  .
T Consensus       149 ~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~~--~~~l~GI~S~g~~~~  225 (251)
T 1pyt_D          149 TNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG-DGVISACNGDSGGPLNCQADG--QWDVRGIVSFGSGLS  225 (251)
T ss_dssp             CCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECC-SCSSCCCCSCTTCEEEEESSS--SEEEEEEEEECCSSC
T ss_pred             CCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecC-CCCCccCCCCCCCceEEEECC--CEEEEEEEEECCCCC
Confidence            34556788999999999999999864444568899999985 566789999999999998643  457899999985  4


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|+++..|.+||...+
T Consensus       226 C~~~~~p~vyt~V~~~~~WI~~~~  249 (251)
T 1pyt_D          226 CNTFKKPTVFTRVSAYIDWINQKL  249 (251)
T ss_dssp             TTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHHh
Confidence            63      8999999999998655

>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...

Probab=99.71  E-value=3.3e-17  Score=114.62  Aligned_cols=90  Identities=33%  Similarity=0.626  Sum_probs=77.1

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.++|+..+.+...+.+.||||+....+.+.|.|||||||+|..++  .+++.||+|++..|.    
T Consensus       150 ~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~--~~~l~Gi~S~g~~c~~~~~  227 (247)
T 3mhw_U          150 YPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG--RMTLTGIVSWGRGCALKDK  227 (247)
T ss_dssp             CCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSBTTB
T ss_pred             cchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECC--CEEEEEEEEECCCCCCCCC
Confidence            57889999999999999998654555688999999976667899999999999998764  457899999998774    


Q ss_pred             --eeeeccccceecceec
Q psy1243          88 --VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~  103 (121)
                        +|+++..|.+||...+
T Consensus       228 p~vyt~V~~~~~WI~~~~  245 (247)
T 3mhw_U          228 PGVYTRVSHFLPWIRSHT  245 (247)
T ss_dssp             CEEEEEGGGCHHHHHHHT
T ss_pred             CeEEEEHHHHHHHHHHHh
Confidence              8999999999997654

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=99.71  E-value=4.4e-17  Score=113.33  Aligned_cols=87  Identities=22%  Similarity=0.424  Sum_probs=73.5

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~--   87 (121)
                      ..+..|+++.+++++.+.|+..|. ...+.+.||||+...++.+.|.|||||||+|++      .+.||+|++.. |.  
T Consensus       132 ~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~------~l~Gi~S~g~~~C~~~  204 (234)
T 3s9c_A          132 TYPDVPHCTNIFIVKHKWCEPLYP-WVPADSRTLCAGILKGGRDTCHGDSGGPLICNG------EMHGIVAGGSEPCGQH  204 (234)
T ss_dssp             BCCSSCEEEEEEEECGGGTTTTCT-TSCTTSSEEEEECTTSSCBCCTTCTTCEEEETT------EEEEEEEECCSSTTCT
T ss_pred             CCCccccccceEecCHHHhhhccc-CCCCCcceEEeecCCCCCccCCCCCCCeEEEeC------CcEEEEEEeCCCCCCC
Confidence            567889999999999999999542 245788999999767788999999999999853      37999999865 63  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|+++..|.+||...+.
T Consensus       205 ~~p~vyt~V~~y~~WI~~~i~  225 (234)
T 3s9c_A          205 LKPAVYTKVFDYNNWIQSIIA  225 (234)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCcEEEEhHHhHHHHHHHHc
Confidence                89999999999988775

>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*

Probab=99.70  E-value=2.7e-17  Score=115.87  Aligned_cols=87  Identities=24%  Similarity=0.526  Sum_probs=74.4

Q ss_pred             cccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc------
Q psy1243          14 LTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY------   87 (121)
Q Consensus        14 ~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~------   87 (121)
                      ..|+++.+++++.++|++.  +...+.+.||||+...++.+.|.|||||||++..++  .+++.||+|++..|.      
T Consensus       147 ~~L~~~~~~i~~~~~C~~~--~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g--~~~l~GI~S~g~~C~~~~~p~  222 (250)
T 1aut_C          147 FVLNFIKIPVVPHNECSEV--MSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHG--TWFLVGLVSWGEGCGLLHNYG  222 (250)
T ss_dssp             SBCEEEEEEEECHHHHHHH--CSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSCTTCCE
T ss_pred             ceeeEEEEEEecHHHhhHH--hccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECC--eEEEEEEEEECCCCCCCCCCE
Confidence            4799999999999999984  445678999999865567899999999999997654  457899999998774      


Q ss_pred             eeeeccccceecceecc
Q psy1243          88 VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 wi~~v~~~~~wi~~~~~  104 (121)
                      +|+++..|.+||...+.
T Consensus       223 vyt~V~~y~~WI~~~~~  239 (250)
T 1aut_C          223 VYTKVSRYLDWIHGHIR  239 (250)
T ss_dssp             EEECGGGTHHHHHHHHC
T ss_pred             EEEEHHHHHHHHHHHhh
Confidence            89999999999988775

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=99.70  E-value=1.6e-17  Score=115.72  Aligned_cols=94  Identities=24%  Similarity=0.355  Sum_probs=79.0

Q ss_pred             CccccccceEEEeccChhhhcccccC----CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-C
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAY----GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-R   84 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~----~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~   84 (121)
                      +..+..|+++.+++++.++|+..+..    ...+.++||||+...++.+.|.|||||||+|.+...+.+++.||+|++ .
T Consensus       135 ~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~  214 (242)
T 3tvj_B          135 GFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSM  214 (242)
T ss_dssp             SSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEES
T ss_pred             CCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCC
Confidence            56678899999999999999986532    124789999998766678999999999999987666777899999998 6


Q ss_pred             Ccc------eeeeccccceecceec
Q psy1243          85 ACY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        85 ~~~------wi~~v~~~~~wi~~~~  103 (121)
                      .|.      +|+++..|.+||...+
T Consensus       215 ~C~~~~~p~vyt~V~~y~~WI~~~i  239 (242)
T 3tvj_B          215 NCGEAGQYGVYTKVINYIPWIENII  239 (242)
T ss_dssp             STTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCCCCeEEEEHHHHHHHHHHHH
Confidence            663      8999999999998654

>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...

Probab=99.70  E-value=2.6e-17  Score=116.06  Aligned_cols=98  Identities=28%  Similarity=0.462  Sum_probs=79.9

Q ss_pred             CCCccccccceEEEeccChhhhcccccC---CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAY---GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR   84 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~---~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~   84 (121)
                      .++..+..|+++.+++++.++|++.+..   ...+.+.||||+...++.+.|.|||||||++..++  .+++.||+|++.
T Consensus       137 ~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g--~~~l~GI~S~g~  214 (254)
T 2bz6_H          137 DRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRG--TWYLTGIVSWGQ  214 (254)
T ss_dssp             TTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETT--EEEEEEEEEECS
T ss_pred             CCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECC--EEEEEEEEEECC
Confidence            3456678999999999999999885432   12578999999865566789999999999998654  457899999998


Q ss_pred             Ccc------eeeeccccceecceeccccc
Q psy1243          85 ACY------VLSKMIRFYASVGIEATSSC  107 (121)
Q Consensus        85 ~~~------wi~~v~~~~~wi~~~~~~s~  107 (121)
                      .|.      +|+++..|.+||...+....
T Consensus       215 ~C~~~~~p~vyt~V~~~~~WI~~~~~~~~  243 (254)
T 2bz6_H          215 GCATVGHFGVYTRVSQYIEWLQKLMRSEP  243 (254)
T ss_dssp             SSSCTTCCEEEEEGGGGHHHHHHHHTSCC
T ss_pred             CCCCCCCCeEEEEHHHHHHHHHHHHhccC
Confidence            774      89999999999998876433

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.70  E-value=2.8e-17  Score=122.97  Aligned_cols=93  Identities=25%  Similarity=0.355  Sum_probs=77.4

Q ss_pred             ccccccceEEEeccChhhhcccccCC----CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CC
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYG----TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RA   85 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~----~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~   85 (121)
                      ..+..|+++.+++++.++|+..+...    ..+.++||||+...++.++|+|||||||++.+..-+.+++.||+|++ ..
T Consensus       297 ~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~  376 (403)
T 1zjk_A          297 FLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMN  376 (403)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSC
T ss_pred             ccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCC
Confidence            56789999999999999999865322    25789999999756678999999999999987555567899999999 56


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|++|..|.+||...+
T Consensus       377 C~~~~~p~vyt~V~~y~~WI~~~i  400 (403)
T 1zjk_A          377 CGEAGQYGVYTKVINYIPWIENII  400 (403)
T ss_dssp             C--CCCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHHH
Confidence            63      8999999999998655

>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*

Probab=99.70  E-value=5.3e-17  Score=113.66  Aligned_cols=93  Identities=28%  Similarity=0.558  Sum_probs=77.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.+.|++.|. ...+.+.||||+....+.+.|.|||||||++..++  .+++.||+|++..|. 
T Consensus       138 ~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~--~~~l~GI~S~g~~c~~  214 (241)
T 2any_A          138 KGEIQNILQKVNIPLVTNEECQKRYQ-DYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNG--MWRLVGITSWGEGCAR  214 (241)
T ss_dssp             TCCCCSBCEEEEEEEECHHHHHTTSC-TTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSC
T ss_pred             CCCcCchhheeEeEEeCHHHhhhHhc-cCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECC--EEEEEEEEEecCCCCC
Confidence            34567889999999999999998542 22478999999865567899999999999998754  457899999987763 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       215 ~~~p~vyt~V~~~~~WI~~~~~  236 (241)
T 2any_A          215 REQPGVYTKVAEYMDWILEKTQ  236 (241)
T ss_dssp             TTCCEEEEEGGGGHHHHHHHHS
T ss_pred             CCCCeEEEEHHHhHHHHHHHhh
Confidence                 89999999999987765

>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2

Probab=99.70  E-value=2.8e-17  Score=114.98  Aligned_cols=93  Identities=24%  Similarity=0.348  Sum_probs=76.7

Q ss_pred             cccccceEEEeccChhhhcccccC---CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAY---GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~---~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      .+..|+++.+++++.+.|++.+..   ...+.++||||+....+.+.|.|||||||++.......+++.||+|++..|. 
T Consensus       140 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~  219 (242)
T 2qy0_B          140 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  219 (242)
T ss_dssp             CCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS
T ss_pred             CCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC
Confidence            567899999999999999985421   2347889999986546789999999999999765556678999999998774 


Q ss_pred             ---eeeeccccceecceecc
Q psy1243          88 ---VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~~  104 (121)
                         +|+++..|.+||...+.
T Consensus       220 ~~~vyt~V~~y~~WI~~~~~  239 (242)
T 2qy0_B          220 GYGFYTKVLNYVDWIKKEME  239 (242)
T ss_dssp             SCEEEEEGGGGHHHHHHHTT
T ss_pred             CCcEEEEHHHHHHHHHHHhh
Confidence               89999999999987653

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=99.70  E-value=2.3e-17  Score=120.88  Aligned_cols=92  Identities=24%  Similarity=0.352  Sum_probs=76.6

Q ss_pred             cccccceEEEeccChhhhcccccC---CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAY---GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~---~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      .+..|+++.+++++.++|++.+..   ...+.++||||+....+.++|+|||||||++.+..-..+++.||+|++..|. 
T Consensus       229 ~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~  308 (329)
T 1md8_A          229 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  308 (329)
T ss_dssp             BCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSS
T ss_pred             CCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCC
Confidence            578899999999999999985421   2347889999996556789999999999999765556678999999998774 


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         +|++|..|.+||...+
T Consensus       309 ~~gvyT~V~~y~~WI~~~i  327 (329)
T 1md8_A          309 GYGFYTKVLNYVDWIKKEM  327 (329)
T ss_dssp             SCEEEEEGGGTHHHHHHHH
T ss_pred             CCcEEEEHHHHHHHHHHHH
Confidence               9999999999997654

>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A

Probab=99.70  E-value=3.7e-17  Score=114.40  Aligned_cols=87  Identities=26%  Similarity=0.521  Sum_probs=71.7

Q ss_pred             cccccceEEEeccChhhhcccccCCC--CcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGT--RIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~--~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      .+..|+++.+++++.++|++...+..  .+.+.||||+...++.+.|.|||||||+|++      .+.||+|++..|.  
T Consensus       140 ~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~~~------~l~Gi~S~g~~C~~~  213 (240)
T 1mza_A          140 PSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICKG------VFHAIVSGGHECGVA  213 (240)
T ss_dssp             CCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEETT------EEEEEECSSCCSSCT
T ss_pred             ccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEECC------EEEEEEEECCCCCCC
Confidence            57889999999999999983212322  5789999999655678999999999999942      6799999997774  


Q ss_pred             ----eeeeccc-cceecceecc
Q psy1243          88 ----VLSKMIR-FYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~-~~~wi~~~~~  104 (121)
                          +|+++.. |.+||...+.
T Consensus       214 ~~p~vyt~v~~~y~~WI~~~~~  235 (240)
T 1mza_A          214 TKPGIYTLLTKKYQTWIKSNLV  235 (240)
T ss_dssp             TCCEEEEECCHHHHHHHHHHTC
T ss_pred             CCCcEEEeChHHHHHHHHHhcc
Confidence                8999998 9999987664

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=99.70  E-value=3.2e-17  Score=113.76  Aligned_cols=88  Identities=36%  Similarity=0.653  Sum_probs=73.4

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||++++      .+.||+|++..|.
T Consensus       126 ~~~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~C~  197 (222)
T 1hj8_A          126 SSTADSNKLQCLNIPILSYSDCNNS--YPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCNG------ELQGVVSWGYGCA  197 (222)
T ss_dssp             CSSCCTTBCEEEEEEBCCHHHHHHH--STTCCCTTEEEESCTTSSCBCCTTCTTCEEEETT------EEEEEEEECSSSS
T ss_pred             CCCCCCceeEEEEEEEcCHHHhhhh--ccCCCCCCeEEeccCCCCCccCCCCcccceEECC------EEEEEEeecCCCC
Confidence            3455678999999999999999984  4456789999998656678999999999999842      5789999987773


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       198 ~~~~p~vyt~v~~~~~WI~~~~  219 (222)
T 1hj8_A          198 EPGNPGVYAKVCIFNDWLTSTM  219 (222)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCcCcEEEEhHHhHHHHHHHh
Confidence                  8999999999998654

>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}

Probab=99.70  E-value=3.1e-17  Score=114.59  Aligned_cols=89  Identities=22%  Similarity=0.434  Sum_probs=75.4

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.++|+..  +...+.+.||||+...++.+.|.|||||||++...+  .+++.||+|++..|.    
T Consensus       132 ~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~--~~~l~Gi~S~g~~C~~~~~  207 (234)
T 2asu_B          132 NDTVLNVALLNVISNQECNIK--HRGRVRESEMCTEGLLAPVGACEGDYGGPLACFTHN--SWVLEGIIIPNRVCARSRW  207 (234)
T ss_dssp             CTTBCEEEEEEEECHHHHHHH--TTTCCCTTEEEECCCSSCCBCCTTCTTCEEEEEETT--EEEEEEEECCCSSSSCTTC
T ss_pred             CCccceEEEeeEEcHHHcccc--cCCccCcceEeecCCCCCCeeccCCCCCceEEEECC--eEEEEEEEEcCCCCCCCCC
Confidence            467899999999999999985  345678999999865567899999999999998764  467899999998774    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       208 p~vyt~V~~~~~WI~~~~~  226 (234)
T 2asu_B          208 PAVFTRVSVFVDWIHKVMR  226 (234)
T ss_dssp             CEEEEEGGGSHHHHHHHC-
T ss_pred             CeEEEEHHHHHHHHHHHhh
Confidence              89999999999987664

>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2

Probab=99.70  E-value=3.6e-17  Score=113.82  Aligned_cols=85  Identities=34%  Similarity=0.641  Sum_probs=72.5

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..||++.+++++.+.|++.  +...+.+.||||+....+.+.|.|||||||+|++      .+.||+|++..|.    
T Consensus       135 ~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~C~~~~~  206 (228)
T 1fxy_A          135 YPDELQCLDAPVLSQAKCEAS--YPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNG------QLQGVVSWGDGCAQKNK  206 (228)
T ss_dssp             CCSSCEEEEEEBCCHHHHHHH--STTTCCTTEEEESCTTCSCBCCTTCTTCEEEETT------EEEEEEEECSSSSBTTB
T ss_pred             CCccceEEEEEEeCHHHhHhh--cCCCCCCCEEEeccCCCCCccccCccccceEECC------EEEEEEEECCCCCCCCC
Confidence            678999999999999999984  4456789999998656678999999999999842      5799999998774    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       207 p~vyt~V~~y~~WI~~~~~  225 (228)
T 1fxy_A          207 PGVYTKVYNYVKWIKNTIA  225 (228)
T ss_dssp             CEEEEEGGGGHHHHHHHHH
T ss_pred             CEEEEEhHHHHHHHHHHHh
Confidence              89999999999987653

>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...

Probab=99.70  E-value=2.9e-17  Score=115.03  Aligned_cols=93  Identities=30%  Similarity=0.589  Sum_probs=76.0

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--C
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--A   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~   85 (121)
                      .++..+..||++.+++++.+.|++.+.+...+.+.||||+. .++.+.|.|||||||+|..++  .+.+.||+|++.  .
T Consensus       137 ~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~~g--~~~l~Gi~S~g~~~~  213 (240)
T 1gvk_B          137 TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG--QYAVHGVTSFVSRLG  213 (240)
T ss_dssp             TTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEETT--EEEEEEEEEECBTTB
T ss_pred             CCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecC-CCCCcccCCCCcCceEEEECC--cEEEEEEEEEeCCCC
Confidence            34566789999999999999999854344457899999984 567899999999999998743  457899999984  5


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|+++..|.+||...+
T Consensus       214 C~~~~~p~vyt~V~~~~~WI~~~i  237 (240)
T 1gvk_B          214 CNVTRKPTVFTRVSAYISWINNVI  237 (240)
T ss_dssp             SSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCCcEEEeHHHHHHHHHHHH
Confidence            53      8999999999998654

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=99.70  E-value=8.2e-17  Score=112.11  Aligned_cols=89  Identities=24%  Similarity=0.466  Sum_probs=74.2

Q ss_pred             CccccccceEEEeccChhhhcccccC-CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAY-GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~-~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~   87 (121)
                      +..+..|+++.+++++.++|+..+.. ...+.+.||||+...++.+.|.|||||||+|++      .+.||+|++.. |.
T Consensus       133 ~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~  206 (238)
T 4e7n_A          133 GTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSGGPLICNG------QFQGIASWGDDPCA  206 (238)
T ss_dssp             CCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTTCEEEETT------EEEEEEEECCSSTT
T ss_pred             CCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCCcceEECC------EEEEEEEEeCCCCC
Confidence            46778999999999999999986431 245788999999767788999999999999843      37899999865 63


Q ss_pred             ------eeeeccccceecceecc
Q psy1243          88 ------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~~  104 (121)
                            +|+++..|.+||...+.
T Consensus       207 ~~~~p~vyt~V~~~~~WI~~~i~  229 (238)
T 4e7n_A          207 QPHKPAAYTKVFDHLDWIENIIA  229 (238)
T ss_dssp             CTTCCEEEEESGGGHHHHHHHHT
T ss_pred             CCCCCeEEEEhHHHHHHHHHHHh
Confidence                  89999999999987775

>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A

Probab=99.70  E-value=6.3e-17  Score=113.31  Aligned_cols=91  Identities=23%  Similarity=0.442  Sum_probs=73.4

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.++|++.+.....+.+.||||+....+.+.|.|||||||++...+  .+++.||+|++..|.    
T Consensus       131 ~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~--~~~l~Gi~S~g~~C~~~~~  208 (240)
T 1si5_H          131 YDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHK--MRMVLGVIVPGRGCAIPNR  208 (240)
T ss_dssp             CCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSS--SEEEEEEECSCSCSSCTTC
T ss_pred             CCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCcEEEEECC--cEEEEEEEEECCCCCCCCC
Confidence            56789999999999999998543222378999999965557899999999999998743  457899999997773    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       209 p~vyt~V~~y~~WI~~~i~  227 (240)
T 1si5_H          209 PGIFVRVAYYAKWIHKIIL  227 (240)
T ss_dssp             CEEEEEGGGGHHHHHHHHS
T ss_pred             CcEEEEHHHHHHHHHHHHh
Confidence              89999999999988775

>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A

Probab=99.69  E-value=2.3e-17  Score=114.24  Aligned_cols=95  Identities=27%  Similarity=0.452  Sum_probs=77.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.++++++++|++.+. ...+.+.||||+....+.+.|.|||||||++...+ +.+++.||+|++..|.
T Consensus       122 ~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~-~~~~l~Gi~S~g~~C~  199 (224)
T 3beu_A          122 EGGSQQRYLLKANVPFVSDAACRSSSS-FILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNA-DEWVQVGIVSWGEGCA  199 (224)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHHCS-SCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTT-SCEEEEEEEEEESSSS
T ss_pred             CCCcccceeeEeeCcccCHHHhhhhcC-CccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCC-CCEEEEEEeccCCCCC
Confidence            345667889999999999999998543 23467899999865567899999999999997643 4567899999998774


Q ss_pred             ------eeeeccccceecceecc
Q psy1243          88 ------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~~  104 (121)
                            +|+++..|.+||...+.
T Consensus       200 ~~~~p~vyt~V~~~~~WI~~~~~  222 (224)
T 3beu_A          200 RKGKYGVYTEVSTFASAIASAAR  222 (224)
T ss_dssp             CTTCCEEEEEHHHHHHHHHHHHT
T ss_pred             CCCCCeEEEEHHHHHHHHHHHHh
Confidence                  89999999999986653

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=99.69  E-value=5.5e-17  Score=115.32  Aligned_cols=93  Identities=32%  Similarity=0.592  Sum_probs=78.6

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      +...+..|+.+.+++++.++|++.+.........++|++...++.++|.|||||||++..++  .+++.||+|++..|. 
T Consensus       170 ~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~--~~~lvGIvS~G~~C~~  247 (276)
T 2vnt_A          170 DYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQG--RMTLTGIVSWGRGCAL  247 (276)
T ss_dssp             CSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSB
T ss_pred             CCCcchhheeeeeeEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCC--eEEEEEEEEECCCCCC
Confidence            34556789999999999999999665555567889999876778899999999999998765  468899999998884 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|++|..|.+||...+
T Consensus       248 ~~~P~vyt~V~~y~~WI~~~~  268 (276)
T 2vnt_A          248 KDKPGVYTRVSHFLPWIRSHT  268 (276)
T ss_dssp             TTBCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCEEEEEHHHHHHHHHHHh
Confidence                 8999999999998765

>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2

Probab=99.69  E-value=5.7e-17  Score=113.42  Aligned_cols=91  Identities=19%  Similarity=0.361  Sum_probs=73.2

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCC--cCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEe----
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTR--IKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRL----   82 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~--~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v----   82 (121)
                      ++..+..|+++.+++++.++|++.+.....  +.+.||||+...++.+.|.|||||||+|..   +.+.+.|++|+    
T Consensus       138 ~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~---~~~~l~Gi~S~~~~~  214 (241)
T 1m9u_A          138 TNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPD---GGTRVVGVTSWVVSS  214 (241)
T ss_dssp             SSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEES---SSEEEEEEEEECCBC
T ss_pred             CCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeC---CCEEEEEEEEEeccC
Confidence            445678999999999999999985432123  789999998645678999999999999974   44578999998    


Q ss_pred             CCCc------ceeeeccccceeccee
Q psy1243          83 SRAC------YVLSKMIRFYASVGIE  102 (121)
Q Consensus        83 ~~~~------~wi~~v~~~~~wi~~~  102 (121)
                      +..|      .+|+++..|.+||...
T Consensus       215 g~~C~~~~~p~vyt~V~~~~~WI~~~  240 (241)
T 1m9u_A          215 GLGACLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             TTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred             CCCccCCCCCEEEEEhHHhHhHHhhh
Confidence            3445      3999999999999754

>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}

Probab=99.69  E-value=4.7e-17  Score=113.64  Aligned_cols=85  Identities=29%  Similarity=0.635  Sum_probs=71.9

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~--   87 (121)
                      ..+..|+++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||+|+      ..+.||+|++ ..|.  
T Consensus       143 ~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~------~~l~Gi~S~g~~~C~~~  214 (238)
T 1spj_A          143 SFPDDLQCVDLKILPNDECKKA--HVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCD------GVLQGVTSWGYVPCGTP  214 (238)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHH--CSSCCCTTEEEEECTTCSSBCCTTCTTCEEEET------TEEEEEEEECCSSTTCT
T ss_pred             CCcCcccEEEEeecCHHHhhhh--ccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEEc------CEEEEEEEeCCCCCCCC
Confidence            5678999999999999999984  344578999999965567899999999999984      2689999998 5563  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||...+
T Consensus       215 ~~p~vyt~V~~y~~WI~~~i  234 (238)
T 1spj_A          215 NKPSVAVRVLSYVKWIEDTI  234 (238)
T ss_dssp             TCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHh
Confidence                8999999999998665

>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*

Probab=99.69  E-value=5.5e-17  Score=112.65  Aligned_cols=86  Identities=33%  Similarity=0.592  Sum_probs=72.0

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Ccc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-ACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~~-   87 (121)
                      +..+..||++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||+|++      .+.||+|++. .|. 
T Consensus       129 ~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~------~l~Gi~S~g~~~C~~  200 (223)
T 2bdg_A          129 GRMPTVLQCVNVSVVSEEVCSKL--YDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNG------YLQGLVSFGKAPCGQ  200 (223)
T ss_dssp             SCCCSBCEEEEEEBCCHHHHHHH--STTTCCTTEEEECCSTTCCBCCTTCTTCEEEETT------EEEEEEEECCSSTTC
T ss_pred             CCCCCcceEEEEEEeCHHHhhhh--hCCCCCCCeEeccCCCCCCCcCCCCCCchheEcc------EEEEEEEecCCCCCC
Confidence            35678999999999999999984  4456789999998645678999999999999852      6789999986 563 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       201 ~~~p~vyt~V~~~~~WI~~~i  221 (223)
T 2bdg_A          201 VGVPGVYTNLCKFTEWIEKTV  221 (223)
T ss_dssp             TTCCEEEECGGGTHHHHHHHH
T ss_pred             CCCCcEEEEHHHhHHHHHHHh
Confidence                 8999999999998654

>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*

Probab=99.69  E-value=5.1e-17  Score=113.51  Aligned_cols=85  Identities=26%  Similarity=0.629  Sum_probs=71.9

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Ccc---
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-ACY---   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~~---   87 (121)
                      .+..||++.++++++++|++.  +...+.+.||||+...++.+.|.|||||||+|+      ..+.||+|++. .|.   
T Consensus       143 ~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~------~~l~Gi~S~g~~~C~~~~  214 (237)
T 2zch_P          143 TPKKLQCVDLHVISNDVCAQV--HPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCN------GVLQGITSWGSEPCALPE  214 (237)
T ss_dssp             CCSBCEEEEEEEECHHHHHHH--CSSBCCTTEEEEECTTCSCBCCTTCTTCEEESS------SSEEEEEEECCSSTTCTT
T ss_pred             CCcccEEeEEEEeCHHHhccc--ccCCCCceEEeecCCCCCCcccCCCccCeEEEC------CEEEEEEEeCcCCCCCCC
Confidence            378899999999999999984  445678999999965667899999999999984      26899999986 563   


Q ss_pred             ---eeeeccccceecceecc
Q psy1243          88 ---VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~~  104 (121)
                         +|+++..|.+||...+.
T Consensus       215 ~p~vyt~V~~~~~WI~~~i~  234 (237)
T 2zch_P          215 RPSLYTKVVHYRKWIKDTIV  234 (237)
T ss_dssp             CCEEEEEGGGGHHHHHHHHH
T ss_pred             CCcEEEEHHHHHHHHHHHHh
Confidence               89999999999987664

>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A

Probab=99.68  E-value=8.7e-17  Score=112.21  Aligned_cols=91  Identities=29%  Similarity=0.530  Sum_probs=71.5

Q ss_pred             CCCccccccceEEEeccChhhhcc--cccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-
Q psy1243           8 SSASNALTLKAARVGTLSQESCRK--EDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-   84 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~--~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-   84 (121)
                      .++..+..|+++.+++++.++|++  .|.....+.+.||||+....+.+.|.|||||||+|++      .+.||+|++. 
T Consensus       130 ~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~  203 (234)
T 1orf_A          130 NSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEG------VFRGVTSFGLE  203 (234)
T ss_dssp             SSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEETT------EEEEEEEECCT
T ss_pred             CCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCCCCCCCeEEECC------EEEEEEEEcCC
Confidence            345567899999999999999984  2222223445999999655678999999999999842      6799999986 


Q ss_pred             -Ccc------eeeecc-ccceecceecc
Q psy1243          85 -ACY------VLSKMI-RFYASVGIEAT  104 (121)
Q Consensus        85 -~~~------wi~~v~-~~~~wi~~~~~  104 (121)
                       .|.      +|+++. .|.+||...+.
T Consensus       204 ~~C~~~~~p~vyt~v~~~~~~WI~~~~~  231 (234)
T 1orf_A          204 NKCGDPRGPGVYILLSKKHLNWIIMTIK  231 (234)
T ss_dssp             TCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence             663      899999 99999987653

>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.68  E-value=6.5e-17  Score=112.29  Aligned_cols=86  Identities=37%  Similarity=0.677  Sum_probs=72.3

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +..+..|+++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||++++      .+.||+|++..|.  
T Consensus       129 ~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~C~~~  200 (223)
T 3mfj_A          129 TSYPDVLKCLKAPILSDSSCKSA--YPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG------KLQGIVSWGSGCAQK  200 (223)
T ss_dssp             CCCCSSCEEEEEEBCCHHHHHHH--STTTCCTTEEEESCTTSSCBCCTTCTTCEEEETT------EEEEEEEECSSSSBT
T ss_pred             CcccchheEEEEEEeCHHHhhhh--hcCcCCCCEEEccCCCCCCCcCCCCcccceEECC------EEEEEEEECCCCCCC
Confidence            34578899999999999999984  4456789999998655678999999999999942      4799999987773  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||...+
T Consensus       201 ~~p~vyt~V~~~~~WI~~~i  220 (223)
T 3mfj_A          201 NKPGVYTKVCNYVSWIKQTI  220 (223)
T ss_dssp             TBCEEEEEGGGGHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHH
Confidence                8999999999998654

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=99.68  E-value=3.4e-17  Score=113.63  Aligned_cols=91  Identities=19%  Similarity=0.224  Sum_probs=75.4

Q ss_pred             ccccccceEEEeccChhhhcccccCC---CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYG---TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~---~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      ..+..|+++.+++++.+.|++.+...   ..+.++||||+...++.+.|.|||||||++++      .+.||+|++..|.
T Consensus       134 ~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~------~l~Gi~S~g~~C~  207 (235)
T 3h7t_A          134 EYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG------TLVGVASYISSMP  207 (235)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCTTCTTCEEEETT------EEEEEECCCTTCC
T ss_pred             chhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccccCCCCCceeeCC------eEEEEEEecCCCC
Confidence            56889999999999999999864321   13789999999766688999999999999843      2799999997774


Q ss_pred             -----eeeeccccceecceeccccc
Q psy1243          88 -----VLSKMIRFYASVGIEATSSC  107 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~~s~  107 (121)
                           +|+++..|.+||...+....
T Consensus       208 ~~~p~vyt~v~~~~~WI~~~i~~~~  232 (235)
T 3h7t_A          208 SEFPSVFLRVGYYVLDIKDIISGKV  232 (235)
T ss_dssp             TTSCEEEEEGGGGHHHHHHHHTTCS
T ss_pred             CCCCceEEEHHHHHHHHHHHHhCCc
Confidence                 99999999999988776443

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.68  E-value=3.2e-17  Score=122.33  Aligned_cols=93  Identities=24%  Similarity=0.348  Sum_probs=74.5

Q ss_pred             cccccceEEEeccChhhhcccccC---CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAY---GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~---~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      .+..|+++.+++++.+.|++.+..   ...+.++||||+...++.++|+|||||||++.......+++.||+|++..|. 
T Consensus       297 ~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~  376 (399)
T 1gpz_A          297 IAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR  376 (399)
T ss_dssp             CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTT
T ss_pred             cCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCC
Confidence            567899999999999999985432   1247889999996555789999999999999876656778999999998774 


Q ss_pred             ---eeeeccccceecceecc
Q psy1243          88 ---VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~~  104 (121)
                         +|++|..|.+||...+.
T Consensus       377 ~~~vyt~V~~y~~WI~~~~~  396 (399)
T 1gpz_A          377 GYGFYTKVLNYVDWIKKEME  396 (399)
T ss_dssp             TEEEEEEGGGGHHHHHHHTC
T ss_pred             CCeEEEEhHHhHHHHHHHhc
Confidence               99999999999987653

>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}

Probab=99.68  E-value=9.2e-17  Score=112.06  Aligned_cols=89  Identities=25%  Similarity=0.319  Sum_probs=73.6

Q ss_pred             ccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCC--CCCccCCCcceEEEeeCCcccCceeEEEEeCCCc----
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGG--ADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC----   86 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~--~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~----   86 (121)
                      +..|+++.+++++.++|++.|. ...+.+.||||+...++  .+.|.|||||||++...+ +.+++.||+|++..|    
T Consensus       140 ~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~-~~~~l~Gi~S~g~~C~~~~  217 (238)
T 1ym0_A          140 PAVLRYVTLNITTNAFCDAVYT-SDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGS-GIFSLVGIVSWGIGCASGY  217 (238)
T ss_dssp             CSBCEEEEEEECCHHHHHHHCT-TSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTT-CCEEEEEEEEECSSSSSSS
T ss_pred             CccceEEEEEeeCHHHHhHhhc-ccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCC-CCEEEEEEEeECCCCCCCC
Confidence            7889999999999999998543 22578999999864444  789999999999998732 456789999999777    


Q ss_pred             -ceeeeccccceecceec
Q psy1243          87 -YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 -~wi~~v~~~~~wi~~~~  103 (121)
                       .+|+++..|.+||...+
T Consensus       218 p~vyt~v~~~~~WI~~~i  235 (238)
T 1ym0_A          218 PGVYSRVGFHAGWITDTI  235 (238)
T ss_dssp             CEEEEEHHHHHHHHHHHH
T ss_pred             CcEEEEHHHhHHHHHHHh
Confidence             38999999999998655

>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*

Probab=99.68  E-value=9.1e-17  Score=111.53  Aligned_cols=87  Identities=32%  Similarity=0.558  Sum_probs=72.9

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~   87 (121)
                      ++..+..|+++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||++++      .+.||+|++ ..|.
T Consensus       127 ~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~------~l~Gi~S~g~~~C~  198 (223)
T 1lo6_A          127 DGDFPDTIQCAYIHLVSREECEHA--YPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGD------HLRGLVSWGNIPCG  198 (223)
T ss_dssp             TSSCCSBCEEEEEEEECHHHHHHH--STTTCCTTEEEEECTTTCCBCCTTTTTCEEEETT------EEEEEEEECCSSCC
T ss_pred             CCCcCceeeEEEEEEeCHHHhhhh--hCCCCCCCeEEeecCCCCCeeccccCCCcEEeCC------EEEEEEeeCCCCCC
Confidence            456678999999999999999984  4456789999999655678999999999999842      578999998 5663


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       199 ~~~~p~vyt~V~~~~~WI~~~i  220 (223)
T 1lo6_A          199 SKEKPGVYTNVCRYTNWIQKTI  220 (223)
T ss_dssp             CSSSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCcEEEEHHHHHHHHHHHh
Confidence                  8999999999998655

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=99.67  E-value=6.9e-17  Score=121.89  Aligned_cols=89  Identities=25%  Similarity=0.456  Sum_probs=75.4

Q ss_pred             ccccceEEEeccChhhhcccccCCCCcCCCeEEEeecC---CCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQ---GGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~---~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +..||++.+++++.+.|+..  +...+.++|||||+..   .+.++|+|||||||+|....-+.+++.||+|++..|.  
T Consensus       322 ~~~L~~~~v~ii~~~~C~~~--~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~  399 (424)
T 3nxp_A          322 PSVLQVVNLPIVERPVCKDS--TRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  399 (424)
T ss_dssp             CSBCEEEEEEBCCHHHHHHT--CSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTC
T ss_pred             CccceEEEeeEEcHHHhhhh--ccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCC
Confidence            78899999999999999984  4456899999998532   2458999999999999875445678999999998884  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|++|..|.+||...+
T Consensus       400 ~~pgVyT~Vs~y~~WI~~~i  419 (424)
T 3nxp_A          400 GKYGFYTHVFRLKKWIQKVI  419 (424)
T ss_dssp             CSCEEEEECTTCHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHH
Confidence                8999999999998654

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=99.67  E-value=8.7e-17  Score=111.53  Aligned_cols=86  Identities=34%  Similarity=0.593  Sum_probs=71.8

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      ..+..|+++.+++++.++|++.+. ...+.+.||||+....+.+.|.|||||||++. +    ..+.||+|++..|.   
T Consensus       132 ~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~-~----g~l~Gi~S~g~~C~~~~  205 (224)
T 1pq7_A          132 STPVNLLKVTVPIVSRATCRAQYG-TSAITNQMFCAGVSSGGKDSCQGDSGGPIVDS-S----NTLIGAVSWGNGCARPN  205 (224)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHHHC-TTTSCTTEEEECCTTCCCBCCTTCTTCEEECT-T----CCEEEEEEECSSSSCTT
T ss_pred             cccceeeEeEEEEEcHHHhhHhhc-CCCCCCCeEEeecCCCCCCCCcCCCCcceECc-C----CeEEEEEEeCCCCCCCC
Confidence            457789999999999999998653 23478999999865667899999999999985 2    26899999997774   


Q ss_pred             ---eeeeccccceeccee
Q psy1243          88 ---VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~  102 (121)
                         +|+++..|.+||...
T Consensus       206 ~p~vyt~V~~~~~WI~~~  223 (224)
T 1pq7_A          206 YSGVYASVGALRSFIDTY  223 (224)
T ss_dssp             CCEEEEETTTSHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHhh
Confidence               899999999999754

>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*

Probab=99.67  E-value=1.1e-16  Score=111.81  Aligned_cols=86  Identities=31%  Similarity=0.634  Sum_probs=71.8

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~-   87 (121)
                      +..+..||++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||+|++      .+.|++|++ ..|. 
T Consensus       141 ~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~~  212 (237)
T 1ao5_A          141 WQKPDDLQCVFITLLPNENCAKV--YLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDG------ILQGTTSYGPVPCGK  212 (237)
T ss_dssp             CCCCSBCEEEEEEEECHHHHHHH--CSSCCCTTEEEEECTTCSCBCCTTCTTCEEEETT------EEEEEEEECCSSTTC
T ss_pred             CCCCCcccEEEEEecChhHhhhh--hcccCCCCEEEEccCCCCCCCCCCCCcceEEECC------EEeEEEeEcCCCCCC
Confidence            45678899999999999999985  3456789999998435667999999999999942      579999998 5563 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       213 ~~~p~vyt~V~~~~~WI~~~~  233 (237)
T 1ao5_A          213 PGVPAIYTNLIKFNSWIKDTM  233 (237)
T ss_dssp             TTCCEEEECGGGGHHHHHHHH
T ss_pred             CCCCcEEEEHHHHHHHHHHHH
Confidence                 8999999999998665

>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C

Probab=99.67  E-value=1.1e-16  Score=111.94  Aligned_cols=92  Identities=26%  Similarity=0.505  Sum_probs=74.5

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--Cc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--AC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~~   86 (121)
                      ++..+..||++.+++++.++|++.+.+...+.+.||||+. . +.+.|.|||||||+|...+ +.+.+.||+|++.  .|
T Consensus       138 ~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~-~~~~C~GDsGgPL~~~~~~-~~~~l~Gi~S~g~~~~C  214 (240)
T 1fon_A          138 GGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGG-D-TRSGCNGDSGGPLNCPAAD-GSWQVHGVTSFVSAFGC  214 (240)
T ss_dssp             SSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECC-S-SSCSTTSCTTCEEEEECSS-SCEEEEEEEEECCTTCS
T ss_pred             CCCCChhheEEEEeeeCHHHhccceecCCccccceEeecC-C-CCcccCCCCCCeEEeEcCC-CCEEEEEEEEEcCCCCC
Confidence            4566789999999999999999854344457899999983 3 3789999999999997632 3467899999975  56


Q ss_pred             c------eeeeccccceecceec
Q psy1243          87 Y------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~  103 (121)
                      .      +|+++..|.+||...+
T Consensus       215 ~~~~~p~vyt~V~~~~~WI~~~~  237 (240)
T 1fon_A          215 NTIKKPTVFTRVSAFIDWIDETI  237 (240)
T ss_dssp             SBTTBCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCcEEEEhHHHHHHHHHHH
Confidence            3      8999999999998654

>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*

Probab=99.67  E-value=1.2e-16  Score=111.16  Aligned_cols=85  Identities=35%  Similarity=0.677  Sum_probs=71.5

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~--   87 (121)
                      ..+..|+++.+++++.++|++.  +...+.+.||||+. ..+.+.|.|||||||+|.+      .+.||+|++ ..|.  
T Consensus       133 ~~~~~L~~~~~~i~~~~~C~~~--~~~~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~~~  203 (227)
T 2psx_A          133 HFPKVLQCLNISVLSQKRCEDA--YPRQIDDTMFCAGD-KAGRDSCQGDSGGPVVCNG------SLQGLVSWGDYPCARP  203 (227)
T ss_dssp             CCCSBCEEEEEEBCCHHHHHHH--STTTCCTTEEEECC-STTCBCCTTCTTCEEEETT------EEEEEEEECCSSTTCT
T ss_pred             CCCchheEEEEEecCHhHhhhh--cCCCCCCCEEcccC-CCCCccCCCCCCcceeeCC------EEEEEEeecCCCCCCC
Confidence            4678899999999999999984  44567899999984 5667899999999999853      679999998 5563  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|+++..|.+||...+.
T Consensus       204 ~~p~vyt~V~~~~~WI~~~~~  224 (227)
T 2psx_A          204 NRPGVYTNLCKFTKWIQETIQ  224 (227)
T ss_dssp             TCCEEEEEGGGCHHHHHHHHH
T ss_pred             CCCcEEEEHHHhHHHHHHHHh
Confidence                89999999999987653

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=99.67  E-value=1.7e-16  Score=110.63  Aligned_cols=86  Identities=24%  Similarity=0.532  Sum_probs=72.3

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~-   87 (121)
                      +..+..|+++.+++++.++|++.|  .. +.+.||||+....+.+.|.|||||||++++      .+.||+|++ ..|. 
T Consensus       130 ~~~~~~l~~~~~~~~~~~~C~~~~--~~-~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~~  200 (231)
T 2aiq_A          130 ATLPDVPHCANINILDYAVCQAAY--KG-LAATTLCAGILEGGKDTCKGDSGGPLICNG------QFQGILSVGGNPCAQ  200 (231)
T ss_dssp             CCCCSSCEEEEEEEECHHHHHHHC--TT-CCSSEEEEECTTCSCBCCTTCTTCEEEETT------EEEEEEEEECSSTTC
T ss_pred             CccCchhhhccceecchhhhhhhh--cC-CCcCcEEeccCCCCCcccCCcCCCcEEECC------EEEEEEEEeCCCCCC
Confidence            446789999999999999999854  33 788999998656778999999999999942      578999998 5563 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       201 ~~~p~vyt~V~~~~~WI~~~~~  222 (231)
T 2aiq_A          201 PRKPGIYTKVFDYTDWIQSIIS  222 (231)
T ss_dssp             TTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCEEEEEHHHHHHHHHHHHc
Confidence                 89999999999987774

>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...

Probab=99.67  E-value=7.4e-17  Score=113.41  Aligned_cols=87  Identities=34%  Similarity=0.582  Sum_probs=73.7

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----   87 (121)
                      .+..|+++.+++++.++|++.|  ...+.+.||||+  ..+.+.|.|||||||++..++  .+.+.||+|++..|.    
T Consensus       151 ~~~~L~~~~~~~~~~~~C~~~~--~~~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~~~--~~~l~GI~S~g~~c~~~~~  224 (245)
T 1t8o_A          151 TPDRLQQASLPLLSNTNCKKYW--GTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNG--AWTLVGIVSWGSSTCSTST  224 (245)
T ss_dssp             CCSBCEEEEEEEECHHHHHHHH--GGGCCTTEEEEE--CSSCBCCTTCTTCEEEEEETT--EEEEEEEEEECCTTCCTTS
T ss_pred             CcchheEEEEeeEcchhhhHhh--cCcCCCceEEcc--CCCCccCcccCcCCEEEEECC--EEEEEEEEEeCCCCCCCCC
Confidence            5788999999999999999853  345789999998  556789999999999998754  457899999997663    


Q ss_pred             --eeeeccccceecceecc
Q psy1243          88 --VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~~  104 (121)
                        +|+++..|.+||...+.
T Consensus       225 p~vyt~V~~~~~WI~~~~~  243 (245)
T 1t8o_A          225 PGVYARVTALVNWVQQTLA  243 (245)
T ss_dssp             EEEEEEGGGTHHHHHHHHH
T ss_pred             CEEEEEHHHHHHHHHHHHc
Confidence              89999999999986653

>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*

Probab=99.67  E-value=9.3e-17  Score=112.66  Aligned_cols=88  Identities=30%  Similarity=0.616  Sum_probs=72.9

Q ss_pred             ccccceEEEeccChhhhcccccCC-------CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAYG-------TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA   85 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~~-------~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~   85 (121)
                      +..|+++.++++++++|+..+...       ..+.+.||||+  ..+.+.|.|||||||+|..++  .+++.||+|++..
T Consensus       142 ~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~--~~~~~~C~GDSGgPL~~~~~g--~~~l~GI~S~g~~  217 (245)
T 2f9n_A          142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAG--NSQRDSCQGDSGGPLVCKVNG--TWLQAGVVSWGEG  217 (245)
T ss_dssp             TCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEEC--CSSSBCCTTCTTCEEEEEETT--EEEEEEEEEECSS
T ss_pred             cccceEEEEEEcCHHHhhhhhcccccccccccccccccEeec--CCCCCcCCCCCCCceEEEECC--EEEEEEEEEeCCC
Confidence            358999999999999999865321       24788999998  456789999999999998754  4578999999987


Q ss_pred             cc------eeeeccccceecceecc
Q psy1243          86 CY------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~~  104 (121)
                      |.      +|+++..|.+||...+.
T Consensus       218 C~~~~~p~vyt~V~~y~~WI~~~~~  242 (245)
T 2f9n_A          218 CAQPNRPGIYTRVTYYLDWIHHYVP  242 (245)
T ss_dssp             SSBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence            73      89999999999987654

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=99.67  E-value=1.6e-16  Score=111.66  Aligned_cols=89  Identities=25%  Similarity=0.453  Sum_probs=75.0

Q ss_pred             ccccceEEEeccChhhhcccccCCCCcCCCeEEEeec---CCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          13 ALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSF---QGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        13 ~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~---~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +..|+++.+++++.+.|+..  +...+.+.||||+..   ..+.+.|.|||||||+|.....+.+++.||+|++..|.  
T Consensus       157 ~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~  234 (259)
T 3rm2_H          157 PSVLQVVNLPIVERPVCKDS--TRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD  234 (259)
T ss_dssp             CSBCEEEEEEBCCHHHHHHT--CSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCT
T ss_pred             cccceEEEEEEeCHHHhhhh--hcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCC
Confidence            77899999999999999984  445678999999853   22358999999999999885556678999999998774  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||...+
T Consensus       235 ~~p~vyt~V~~~~~WI~~~i  254 (259)
T 3rm2_H          235 GKYGFYTHVFRLKKWIQKVI  254 (259)
T ss_dssp             TCCEEEEETGGGHHHHHHHH
T ss_pred             CCCeEEEEHHHhHHHHHHHH
Confidence                8999999999998655

>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2

Probab=99.67  E-value=1.4e-16  Score=111.14  Aligned_cols=90  Identities=24%  Similarity=0.553  Sum_probs=73.5

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--Cc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--AC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~~   86 (121)
                      ++..+..|+++.+++++.+.|++.+.+...+.+.||||+. . +.+.|.|||||||+|..++  .+++.||+|++.  .|
T Consensus       138 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~-~-~~~~C~GDSGgPL~~~~~g--~~~l~Gi~S~g~~~~C  213 (236)
T 1elt_A          138 GGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGG-G-ANSGCNGDSGGPLNCQVNG--SYYVHGVTSFVSSSGC  213 (236)
T ss_dssp             TCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECC-S-SCBCCTTCTTCEEEEEETT--EEEEEEEEEECCSSCT
T ss_pred             CCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecC-C-CCccCCCCCCCeeEEEECC--EEEEEEEEEEeCCCCC
Confidence            4456789999999999999999854344457899999983 3 4789999999999998744  457899999974  56


Q ss_pred             c------eeeeccccceeccee
Q psy1243          87 Y------VLSKMIRFYASVGIE  102 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~  102 (121)
                      .      +|+++..|.+||...
T Consensus       214 ~~~~~p~vyt~V~~~~~WI~~~  235 (236)
T 1elt_A          214 NASKKPTVFTRVSAYISWMNGI  235 (236)
T ss_dssp             TCTTCCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCCeEEEEHHHhHHHHHhh
Confidence            3      899999999999753

>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2

Probab=99.66  E-value=1.2e-16  Score=111.55  Aligned_cols=87  Identities=32%  Similarity=0.669  Sum_probs=72.0

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~-   87 (121)
                      +..+..||++.+++++.++|++.|  ...+.+.||||+....+.+.|.|||||||+++      ..+.||+|++ ..|. 
T Consensus       139 ~~~~~~L~~~~~~~~~~~~C~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~------~~l~Gi~S~g~~~C~~  210 (235)
T 1ton_A          139 MVVSHDLQCVNIHLLSNEKCIETY--KDNVTDVMLCAGEMEGGKDTCAGDSGGPLICD------GVLQGITSGGATPCAK  210 (235)
T ss_dssp             CCCCSBCEEEEEEEECGGGCGGGG--STTGGGGEEEEECTTCSCBCCTTCTTCEEEET------TEEEEEECCCCSSCSC
T ss_pred             CccCccceEEEEEEeCHHHHHHHh--cCcCCCCeEeeccCCCCCcCCCCCCccccEEC------CEEEEEEeeCCCCCCC
Confidence            456788999999999999999853  44678899999965567899999999999984      2578999998 4463 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       211 ~~~p~vyt~V~~~~~WI~~~~~  232 (235)
T 1ton_A          211 PKTPAIYAKLIKFTSWIKKVMK  232 (235)
T ss_dssp             TTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCeEEEEHHHHHHHHHHHHc
Confidence                 89999999999986653

>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2

Probab=99.66  E-value=6.4e-17  Score=113.00  Aligned_cols=87  Identities=23%  Similarity=0.457  Sum_probs=73.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Ccc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-ACY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~~   87 (121)
                      .+..+..|+++.+++++.++|++.  +...+.+.||||+....+.+.|.|||||||+|++      .+.||+|++. .|.
T Consensus       140 ~~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~~C~  211 (237)
T 1gvz_A          140 TNRGSGTLQCVELRLQSNEKCARA--YPEKMTEFVLCATHRDDSGSICLGDSGGALICDG------VFQGITSWGYSECA  211 (237)
T ss_dssp             TCSEEEEEEEEEEEEECGGGGCSS--CGGGCCTTEEEEECSSTTCEECGGGTTCEEEETT------EEEEEECCCSSSCE
T ss_pred             CCCCCCccEEEEEeEeChhHhhhh--hhhcCCCceEEEeeCCCCCccCCCCccCcEeeCC------EEEEEEEeCCCCCC
Confidence            455678999999999999999984  3456789999999655677899999999999842      5789999996 674


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       212 ~~~~p~vyt~V~~~~~WI~~~~  233 (237)
T 1gvz_A          212 DFNDNFVFTKVMPHKKWIKETI  233 (237)
T ss_dssp             ETTTSCCEEESGGGHHHHHHHH
T ss_pred             CCCCCcEEEEHHHHHHHHHHHH
Confidence                  8999999999998665

>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...

Probab=99.66  E-value=1.6e-16  Score=109.88  Aligned_cols=86  Identities=37%  Similarity=0.677  Sum_probs=73.2

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      ..+..|+++.+++++.+.|+..  +...+.++||||+....+.+.|.|||||||++++      .+.||+|++..|.   
T Consensus       130 ~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~------~l~Gi~S~g~~c~~~~  201 (223)
T 4i8h_A          130 SYPDVLKCLKAPILSDSSCKSA--YPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSG------KLQGIVSWGSGCAQKN  201 (223)
T ss_dssp             CCCSSCEEEEEEBCCHHHHHHH--STTTCCTTEEEESCTTSSCBCCTTCTTCEEEETT------EEEEEEEECSSSSCTT
T ss_pred             CccccceEEEeeecCHHHHHHh--hCCCCCCCeEeccCCCCCCccCCCCCCCcEEECC------EEEEEEEcCCCCCCCC
Confidence            4578899999999999999984  4556889999998667788999999999999843      5799999987764   


Q ss_pred             ---eeeeccccceecceecc
Q psy1243          88 ---VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~~  104 (121)
                         +|+++..|.+||...+.
T Consensus       202 ~p~vyt~v~~~~~WI~~~i~  221 (223)
T 4i8h_A          202 KPGVYTKVCNYVSWIKQTIA  221 (223)
T ss_dssp             CCEEEEEGGGGHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHHh
Confidence               89999999999986653

>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}

Probab=99.66  E-value=6.1e-17  Score=121.33  Aligned_cols=93  Identities=22%  Similarity=0.443  Sum_probs=76.0

Q ss_pred             ccccccceEEEeccChhhhcccccC-----CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCC-cccCceeEEEEeCC
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAY-----GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG-CDKGASLGTDRLSR   84 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~-----~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~-~~~~~~~g~~~v~~   84 (121)
                      ..+..||++.+++++.++|+..|..     ...+.+.||||++ ..+.++|+|||||||+|...+ -+.+++.||+|++.
T Consensus       279 ~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~-~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~  357 (394)
T 2b9l_A          279 RYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGG-EQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGI  357 (394)
T ss_dssp             SSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEECC-BSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTT
T ss_pred             cccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEeeC-CCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECC
Confidence            4578999999999999999986532     1247889999985 456799999999999997532 34567899999998


Q ss_pred             Ccc------eeeeccccceecceecc
Q psy1243          85 ACY------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        85 ~~~------wi~~v~~~~~wi~~~~~  104 (121)
                      .|.      +|++|..|.+||...+.
T Consensus       358 ~C~~~~~PgVYT~V~~y~~WI~~~i~  383 (394)
T 2b9l_A          358 GCGDENVPGVYANVAHFRNWIDQEMQ  383 (394)
T ss_dssp             CCCBSSSCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCCCeEEEEHHHhHHHHHHHHH
Confidence            774      89999999999987764

>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2

Probab=99.66  E-value=1.3e-16  Score=110.84  Aligned_cols=86  Identities=38%  Similarity=0.666  Sum_probs=71.1

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~   87 (121)
                      ++..+..|+++.+++++.++|++.  +...+.+.||||+.. .+.+.|.|||||||++++      .+.||+|++ ..|.
T Consensus       132 ~~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~-~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~~C~  202 (225)
T 1npm_A          132 QENFPNTLNCAEVKIYSQNKCERA--YPGKITEGMVCAGSS-NGADTCQGDSGGPLVCDG------MLQGITSWGSDPCG  202 (225)
T ss_dssp             SCCCCSBCEEEEEEECCHHHHHHH--STTTCCTTEEEEECT-TCCBCCTTCTTCEEEETT------EEEEEEEECCSSSC
T ss_pred             CCCCCccceEeEEeeecHHHhhHH--hCCCCCCCEEeecCC-CCCeecCCCCCchheECC------EEEEEEEeCCCCCC
Confidence            455678999999999999999985  445678999999853 367899999999999842      578999998 5563


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       203 ~~~~p~vyt~V~~y~~WI~~~~  224 (225)
T 1npm_A          203 KPEKPGVYTKICRYTTWIKKTM  224 (225)
T ss_dssp             BTTBCEEEEEHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEHHHHHHHHHHHh
Confidence                  8999999999997643

>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A

Probab=99.65  E-value=1.3e-16  Score=110.84  Aligned_cols=86  Identities=27%  Similarity=0.464  Sum_probs=71.7

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~-   87 (121)
                      +..+..|+++.+++++.++|++.|  ...+.+.||||+....+.+.|.|||||||++++      .+.||+|++ ..|. 
T Consensus       128 ~~~~~~L~~~~~~~~~~~~C~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~~  199 (224)
T 2qxi_A          128 VTFPSDLMCVDVKLISPQDCTKVY--KDLLENSMLCAGIPDSKKNACNGDSGGPLVCRG------TLQGLVSWGTFPCGQ  199 (224)
T ss_dssp             CCCCSBCEEEEEEEECHHHHHHHH--GGGCCTTEEEEECTTCCCBCCTTCTTCEEEETT------EEEEEEEECCSSSCC
T ss_pred             CCCChhheEEEeeecCHHHhhHHh--cCcCCCCeEEecCCCCCCccCCCCccccEEECC------EEEEEEEeCCCCCCC
Confidence            456789999999999999999854  345788999999655678999999999999842      579999998 4553 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       200 ~~~p~vyt~V~~~~~WI~~~~  220 (224)
T 2qxi_A          200 PNDPGVYTQVCKFTKWINDTM  220 (224)
T ss_dssp             TTCCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCeEEEEHHHHHHHHHHHH
Confidence                 8999999999998655

>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*

Probab=99.65  E-value=3.4e-16  Score=108.71  Aligned_cols=87  Identities=24%  Similarity=0.458  Sum_probs=73.1

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~--   87 (121)
                      ..+..|+++.+++++.+.|+..|. ...+.+.||||+...++.+.|.|||||||+|++      .+.||+|++.. |.  
T Consensus       132 ~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~C~~~  204 (234)
T 3s69_A          132 TYPDVPYCAYINLLDDAVCQAGYP-ELLTEYRTLCAGILEGGKDTCGGDSGGPLICNG------QFQGIVSFGAHPCGQG  204 (234)
T ss_dssp             CCCSSCEEEEEEEECHHHHHHHCT-TCCTTSCEEEEECTTCSCBCCTTCTTCEEEETT------EEEEEEEECCSSTTCT
T ss_pred             CcccccceeEEeecCHHHHhhhcc-cccCCcceEeccCCCCCCccCCCCCccceEEcC------EEEEEEEEcccccCCC
Confidence            567889999999999999998542 245678999999767788999999999999853      37899999865 63  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|+++..|.+||...+.
T Consensus       205 ~~p~vyt~V~~~~~WI~~~i~  225 (234)
T 3s69_A          205 LKPGVYTKVFDYNHWIQSIIA  225 (234)
T ss_dssp             TCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCcEEeeHHHHHHHHHHHhc
Confidence                89999999999987775

>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A

Probab=99.65  E-value=2.1e-16  Score=109.69  Aligned_cols=86  Identities=22%  Similarity=0.479  Sum_probs=70.5

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Ccc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-ACY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~~   87 (121)
                      ++..+..|+++.+++++.++|++.+.....+.+.||||+  ..+.+.|.|||||||++++      .+.|+++++. .|.
T Consensus       134 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~--~~~~~~C~GDsGgPL~~~~------~l~Gi~s~g~~~C~  205 (228)
T 2xw9_A          134 AGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNRRDSCKGDAGGPLVCGG------VLEGVVTSGSRVCG  205 (228)
T ss_dssp             TCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEEC--CSSCBCCTTCTTCEEEETT------EEEEEECCSCCCSS
T ss_pred             CCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecC--CCCCccCCCCCcccEEECC------EEEEEEeecCCcCC
Confidence            445678999999999999999986543356789999998  3567899999999999942      6789988886 563


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            +|+++..|.+||...
T Consensus       206 ~~~~p~vyt~V~~~~~WI~~~  226 (228)
T 2xw9_A          206 NRKKPGIYTRVASYAAWIDSV  226 (228)
T ss_dssp             CTTSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCcEEEEHHHHHHHHHHH
Confidence                  899999999999754

>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2

Probab=99.65  E-value=1.2e-16  Score=111.89  Aligned_cols=87  Identities=30%  Similarity=0.608  Sum_probs=66.5

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCcc-
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RACY-   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~~-   87 (121)
                      +..+..|+++.+++++.++|++.  +...+.+.||||+...++.+.|.|||||||++++      .+.||+|++ ..|. 
T Consensus       144 ~~~~~~L~~~~~~~~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~~C~~  215 (240)
T 1sgf_A          144 FKYPDDLQCVNLKLLPNEDCDKA--HEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDG------ILQGITSWGPEPCGE  215 (240)
T ss_dssp             --------CEEEEEECTHHHHTT--CSSBCCTTEEEEEECSSSEEECCCCTTCEEEETT------EEEEEECCCCSSCCC
T ss_pred             CCCCccccEEeeeEeCHHHhhhh--hCCCcCCCeEeEccCCCCCCCCCCCCcCcEEEcc------EEEEEEEECCCCCCC
Confidence            34578899999999999999984  4456789999999655677899999999999842      579999998 4453 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       216 ~~~p~vyt~V~~~~~WI~~~~~  237 (240)
T 1sgf_A          216 PTEPSVYTKLIKFSSWIRETMA  237 (240)
T ss_dssp             SSCCEEEEESGGGHHHHHHHHH
T ss_pred             CCCCeEEEeHHHHHHHHHHHHh
Confidence                 89999999999987664

>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A

Probab=99.65  E-value=2.6e-16  Score=109.36  Aligned_cols=89  Identities=20%  Similarity=0.310  Sum_probs=69.6

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC---
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR---   84 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~---   84 (121)
                      .++..+..|+++.+++++.++|++.+. .....+.||||+....+.+.|.|||||||+|++      .+.||+|++-   
T Consensus       132 ~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~gc~~~  204 (227)
T 1iau_A          132 PLGKHSHTLQEVKMTVQEDRKCESDLR-HYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNK------VAQGIVSYGRNNG  204 (227)
T ss_dssp             SSSCCCSBCEEEEEEBCCHHHHHHHTT-TTCCTTTEEEESCTTSCCBCCTTCTTSEEEETT------EEEEEEEEECTTS
T ss_pred             CCCCcCceeeEeeeeeechHHhhhHhc-cccCCCcEEEeECCCCCCeeeecCCCchheEee------EEEEEEeEecCCC
Confidence            345667899999999999999998532 122345599999655578999999999999942      6789999871   


Q ss_pred             -Ccceeeeccccceecceec
Q psy1243          85 -ACYVLSKMIRFYASVGIEA  103 (121)
Q Consensus        85 -~~~wi~~v~~~~~wi~~~~  103 (121)
                       +-.+|+++..|.+||...+
T Consensus       205 ~~p~vyt~v~~~~~WI~~~~  224 (227)
T 1iau_A          205 MPPRACTKVSSFVHWIKKTM  224 (227)
T ss_dssp             CSCEEEEEGGGGHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHH
Confidence             1238999999999998654

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=99.64  E-value=4.4e-16  Score=107.94  Aligned_cols=86  Identities=23%  Similarity=0.520  Sum_probs=70.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.++|++. .+ . +.+.||||+. ..+.+.|.|||||||++++      .+.||+|++..|.
T Consensus       130 ~~~~~~~~L~~~~~~~~~~~~C~~~-~~-~-~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~~------~l~GI~S~g~~C~  199 (222)
T 1eq9_A          130 LGGNTPNALQEIELIVHPQKQCERD-QW-R-VIDSHICTLT-KRGEGACHGDSGGPLVANG------AQIGIVSFGSPCA  199 (222)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHH-SS-S-CCTTEEEECC-CTTCBCCTTCTTCEEEETT------EEEEEEEECSTTT
T ss_pred             CCCcccchheEeEEEEeCHHHhCcc-cC-C-CCccEEeecC-CCCCeeeeCCccceEEECC------EEEEEEEECCCcC
Confidence            3455678999999999999999932 22 2 7789999985 5667899999999999842      6799999997774


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       200 ~~~p~vyt~V~~~~~WI~~~~  220 (222)
T 1eq9_A          200 LGEPDVYTRVSSFVSWINANL  220 (222)
T ss_dssp             SSSCEEEEEGGGGHHHHHHTS
T ss_pred             CCCCCEEEEHHHHHHHHHHHh
Confidence                 8999999999998654

>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2

Probab=99.64  E-value=5.9e-16  Score=107.59  Aligned_cols=87  Identities=24%  Similarity=0.401  Sum_probs=69.3

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC---
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA---   85 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~---   85 (121)
                      ++..+..|+++.+++++.++|++.  +...+.+.||||+...+....|.|||||||+|++      .+.||+|++-.   
T Consensus       133 ~~~~~~~L~~~~~~i~~~~~C~~~--~~~~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~~~------~l~Gi~S~gc~~~~  204 (227)
T 1euf_A          133 NMPSTDKLQEVDLEVQSEEKCIAR--FKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCNG------VAQGIVSYGRNDGT  204 (227)
T ss_dssp             TCCBCSBCEEEEEEBCCTHHHHTT--CTTCCTTTEEEESCTTSCCBCCTTCTTCEEEETT------EEEEEEEECCTTCC
T ss_pred             CCCCchhheEeEeccccHHHhhHh--hcCcCCCcEEEccCCCCCCcccccCCCCceEECC------EEEEEEEEeCCCCC
Confidence            445678999999999999999984  4445788999998644435678999999999842      67899998721   


Q ss_pred             -cceeeeccccceecceec
Q psy1243          86 -CYVLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 -~~wi~~v~~~~~wi~~~~  103 (121)
                       -.+|+++..|.+||...+
T Consensus       205 ~p~vyt~V~~y~~WI~~~~  223 (227)
T 1euf_A          205 TPDVYTRISSFLSWIHSTM  223 (227)
T ss_dssp             SCEEEEEGGGTHHHHHHHT
T ss_pred             CCeEEEEHHHhHHHHHHHH
Confidence             238999999999998655

>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}

Probab=99.63  E-value=1.8e-16  Score=119.21  Aligned_cols=90  Identities=23%  Similarity=0.344  Sum_probs=72.6

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCC----cccCceeEEEEeC-CC
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG----CDKGASLGTDRLS-RA   85 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~----~~~~~~~g~~~v~-~~   85 (121)
                      ..+..|+++.+++++.++|++.|.  ..+..+||||++ ..+.++|+|||||||++....    -+.+++.||+|++ ..
T Consensus       272 ~~s~~L~~~~v~iv~~~~C~~~~~--~~~~~~~iCAg~-~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~  348 (408)
T 2xxl_A          272 SSSDVLLQANVPLQPRSACSQAYR--RAVPLSQLCVGG-GDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVT  348 (408)
T ss_dssp             CSCSBCEEEEEEEECHHHHHHHHT--SCCCTTEEEECC-SCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCC
T ss_pred             CCCchheEeeeeecCHHHHHHHhc--ccCCCceEeecC-CCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCC
Confidence            367899999999999999998543  235668999985 446899999999999765431    2356789999999 66


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      +|++|..|.+||...+
T Consensus       349 Cg~~~~PgVYTrVs~y~~WI~~~i  372 (408)
T 2xxl_A          349 CGQISLPGLYTNVGEYVQWITDTM  372 (408)
T ss_dssp             TTSCCCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCCCeEEEEHHHHHHHHHHHH
Confidence            64      8999999999998776

>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*

Probab=99.63  E-value=5.6e-16  Score=107.54  Aligned_cols=86  Identities=19%  Similarity=0.379  Sum_probs=70.0

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc---
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC---   86 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~---   86 (121)
                      +..+..|+++.+++++.++|+..|  .....+.||||+...++.+.|.|||||||+|++      .+.||+|++.-+   
T Consensus       133 ~~~~~~l~~~~~~i~~~~~C~~~~--~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~S~g~~~~~~  204 (224)
T 1cgh_A          133 RRGTDTLREVQLRVQRDRQCLRIF--GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNN------VAHGIVSYGKSSGVP  204 (224)
T ss_dssp             SCCCSBCEEEEEEBCCHHHHHHHC--TTCCTTTEEEECCTTSCCBCCTTCTTCEEEETT------EEEEEEEECCTTCCS
T ss_pred             CCCCCcceEEEEEeeCHHHHHHHh--CcCCCcceEeeccCCCCCeEeeCCCccceEEcc------EEEEEEEEECCCCCC
Confidence            455789999999999999999854  334556699998655578999999999999942      679999998622   


Q ss_pred             -ceeeeccccceecceec
Q psy1243          87 -YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 -~wi~~v~~~~~wi~~~~  103 (121)
                       .+|+++..|.+||...+
T Consensus       205 p~vyt~V~~~~~WI~~~~  222 (224)
T 1cgh_A          205 PEVFTRVSSFLPWIRTTM  222 (224)
T ss_dssp             CEEEEEGGGGHHHHHHHH
T ss_pred             CeEEEEHHHhHHHHHHHh
Confidence             39999999999998654

>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A

Probab=99.63  E-value=7e-16  Score=106.82  Aligned_cols=86  Identities=19%  Similarity=0.419  Sum_probs=72.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.+.|+.   +.....+.+|||+....+.+.|.|||||||+|.      ..+.||+|++..|. 
T Consensus       134 ~~~~~~~L~~~~~~~~~~~~C~~---~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~------~~l~Gi~S~g~~c~~  204 (226)
T 4ag1_A          134 LKPGSDTLQEVKLRLMDPQACSH---FRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCA------GVAQGIVSYGRSDAK  204 (226)
T ss_dssp             TSCBCSBCEEEEEEEECGGGGTT---STTCCTTTEEEESCTTSCCBCCTTCTTCEEEET------TEEEEEEEECBTTCC
T ss_pred             CCCCCCEeEEEEEEEcChHHccc---ccCcCccceEeeccCCCCCcCccCCCCCceEEc------CEEEEEEEECCCCCC
Confidence            44567899999999999999995   233457889999865677899999999999983      36899999998774 


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         +|+++..|.+||...+
T Consensus       205 ~p~vyt~v~~~~~WI~~~i  223 (226)
T 4ag1_A          205 PPAVFTRISHYRPWINQIL  223 (226)
T ss_dssp             SCEEEEEHHHHHHHHHHHH
T ss_pred             CCCEEEEhHHHHHHHHHHH
Confidence               9999999999998654

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=99.63  E-value=6e-16  Score=107.14  Aligned_cols=89  Identities=19%  Similarity=0.342  Sum_probs=73.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+++.+++++.+.|++.+. .....+.+||++....+.+.|.|||||||+|+.      .+.||+|++..|.
T Consensus       133 ~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~~~------~l~Gi~S~g~~c~  205 (227)
T 3fzz_A          133 PDGEFPKTLHEVKLTVQKDQVCESQFQ-SSYNRANEICVGDSKIKGASFEEDSGGPLVCKR------AAAGIVSYGQTDG  205 (227)
T ss_dssp             TTSCCCSBCEEEEEEBCCHHHHHHHHT-TTCCTTTEEEECCCSSCBCCTTTTTTCEEEETT------EEEEEEEECCTTC
T ss_pred             CCCCCCCeeeEEEeeeecHHHhhhhhc-cccCCCceEEEeCCCCCCcccccCCccceEEec------CCcEEEEECCCCC
Confidence            445678899999999999999998542 233578999998666778999999999999843      5789999997774


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||...+
T Consensus       206 ~~p~vyt~V~~~~~WI~~~i  225 (227)
T 3fzz_A          206 SAPQVFTRVLSFVSWIKKTM  225 (227)
T ss_dssp             SSSEEEEEGGGTHHHHHHHH
T ss_pred             CCCeEEEEhHHhHHHHHHHH
Confidence                9999999999997654

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=99.62  E-value=2.4e-16  Score=123.98  Aligned_cols=93  Identities=28%  Similarity=0.570  Sum_probs=67.2

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.++++++++|++.|. ...+.+.||||++..++.++|+|||||||++..++  .+++.||+|++..|. 
T Consensus       525 ~~~~s~~L~~~~v~i~~~~~C~~~~~-~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~--~~~lvGIvS~G~~C~~  601 (625)
T 2f83_A          525 RDKIQNTLQKAKIPLVTNEECQKRYR-GHKITHKMICAGYREGGKDACKGDSGGPLSCKHNE--VWHLVGITSWGEGCAQ  601 (625)
T ss_dssp             --CCCSBCBCCEECCCCHHHHHTTCT-TSCCCTTBCCC----------CCCTTCEEEEEETT--EEEEEEEEEECCC---
T ss_pred             CCcCCcccEEEEEEEcCHHHHHHHhc-cCCCCCCeEEeecCCCCCcCCCCCcccceEEEECC--eEEEEEEEEeCCCCCC
Confidence            34567899999999999999998542 23578999999865667899999999999998754  457899999998773 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|++|..|.+||...+.
T Consensus       602 ~~~P~vyT~V~~y~~WI~~~~~  623 (625)
T 2f83_A          602 RERPGVYTNVVEYVDWILEKTQ  623 (625)
T ss_dssp             -CCCCEEEEGGGGHHHHHHTC-
T ss_pred             CCCCeEEEEHHHHHHHHHHHHh
Confidence                 99999999999987653

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=99.61  E-value=8.5e-16  Score=106.34  Aligned_cols=86  Identities=20%  Similarity=0.264  Sum_probs=70.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.++|+..|. ...+.+.||||+.  .+.+.|.|||||||++++      .+.||+|++..|. 
T Consensus       135 ~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~--~~~~~C~GDsGgPl~~~~------~l~Gi~S~g~~c~~  205 (228)
T 3h7o_A          135 MDPKDHDLKSAQLTVVDLDECRTKYG-PIFLSLQVFCAQK--VGVSLESGDAGDPTVQQD------TLVGVAAYFPKRPE  205 (228)
T ss_dssp             SCGGGGBCEEEEEEEECHHHHHHHHT-TSCCCSSEEEEEC--TTCCCCGGGTTCEEEETT------EEEEEECCCTTCCT
T ss_pred             CCCcccccccceeEEEcHHHHHHHhc-CccCCceEEecCC--CCCcCCCCCCCCcceecC------eEEEEEeecCcCCC
Confidence            34667889999999999999998643 2357889999984  338899999999999843      3789999887664 


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||...+
T Consensus       206 ~~p~vyt~v~~~~~WI~~~i  225 (228)
T 3h7o_A          206 GAPEVFTKVGSYVSWIQDII  225 (228)
T ss_dssp             TCCEEEEEGGGTHHHHHHHH
T ss_pred             CCCcEEEEHHHHHHHHHHHh
Confidence                8999999999997654

>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2

Probab=99.61  E-value=6.2e-16  Score=107.49  Aligned_cols=84  Identities=24%  Similarity=0.521  Sum_probs=70.5

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--Cc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--AC--   86 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~~--   86 (121)
                      ..+..||++.+++++.++|++.|.   .+.+.||||+. ..+.+.|.|||||||+++      ..+.||+|++.  .|  
T Consensus       133 ~~~~~L~~~~~~i~~~~~C~~~~~---~~~~~~~Ca~~-~~~~~~C~GDSGgPL~~~------~~l~Gi~S~g~~~~C~~  202 (226)
T 1azz_A          133 GISDVLRQVDVPIMSNADCDAVYG---IVTDGNICIDS-TGGKGTCNGDSGGPLNYN------GLTYGITSFGAAAGCEA  202 (226)
T ss_dssp             SSCSBCEECCEEEECHHHHHHHHS---CCCTTEEEECC-TTTCBCCTTCTTCEEEET------TEEEEEEEEEETTCTTS
T ss_pred             CCCchhEEeeEEEEChhHhhhhhC---cCCCceEeecC-CCCCccCCCCCCcceEEC------CEEEEEEEEECCCCCCC
Confidence            567899999999999999998542   57899999985 567899999999999962      26799999886  45  


Q ss_pred             ---ceeeeccccceecceecc
Q psy1243          87 ---YVLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ---~wi~~v~~~~~wi~~~~~  104 (121)
                         .+|+++..|.+||...+.
T Consensus       203 ~~p~vyt~V~~~~~WI~~~~~  223 (226)
T 1azz_A          203 GYPDAFTRVTYFLDWIQTQTG  223 (226)
T ss_dssp             CCCEEEEESGGGHHHHHHHHC
T ss_pred             CCCCEEEEHHHHHHHHHHHhC
Confidence               389999999999987765

>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2

Probab=99.60  E-value=9.7e-16  Score=105.88  Aligned_cols=86  Identities=19%  Similarity=0.381  Sum_probs=71.2

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.+.|++   +.....+.+||++......+.|.|||||||+|.      ..+.||+|++..|. 
T Consensus       134 ~~~~~~~l~~~~~~~~~~~~C~~---~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~------~~l~Gi~S~g~~c~~  204 (224)
T 3rp2_A          134 RDPTSYTLREVELRIMDEKACVD---YRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLCA------GVAHGIVSYGHPDAK  204 (224)
T ss_dssp             TEEECSBCEEEEEEEECGGGTTT---TTCCCTTTEEEECCTTSCCBCCTTTTTCEEEET------TEEEEEEEECCTTCC
T ss_pred             CCCCCceeeEeeeeecChHHhcc---ccccCcCCEEEecCCCCCCeeccCCCCCeEEEc------ceeeEEEEECCCCCC
Confidence            34457789999999999999997   233457889999866667899999999999984      26899999997774 


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         +|+++..|.+||...+
T Consensus       205 ~p~vyt~v~~y~~WI~~~i  223 (224)
T 3rp2_A          205 PPAIFTRVSTYVPWINAVI  223 (224)
T ss_dssp             SCEEEEEHHHHHHHHHHHH
T ss_pred             CCcEEEEHHHhHHHHHHHh
Confidence               8999999999997643

>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A

Probab=99.59  E-value=1.8e-15  Score=121.61  Aligned_cols=92  Identities=32%  Similarity=0.554  Sum_probs=77.2

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      +..+..|+++.+++++.+.|+........+.+.|||||...++.++|+||||||||+...+  .+++.||+|++..|.  
T Consensus       691 ~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~--~~~LvGIvS~G~gC~~~  768 (791)
T 4dur_A          691 TFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD--KYILQGVTSWGLGCARP  768 (791)
T ss_dssp             -CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEEEEEETT--EEEEEEECCTTTCCBBT
T ss_pred             CCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccceEEEeCC--eEEEEEEEEeCCCCCCC
Confidence            3457889999999999999998543455689999999976678899999999999998764  457899999998774  


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|++|..|.+||...+
T Consensus       769 ~~PgVYTrVs~y~dWI~~~i  788 (791)
T 4dur_A          769 NKPGVYVRVSRFVTWIEGVM  788 (791)
T ss_dssp             TBCEEEEEGGGTHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHH
Confidence                8999999999997654

>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*

Probab=99.57  E-value=4.4e-15  Score=102.91  Aligned_cols=81  Identities=21%  Similarity=0.423  Sum_probs=68.9

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RAC   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~   86 (121)
                      .++..+..|+++.+++++.++|+.          +||||+....+.+.|.|||||||++.+      .+.||+|++ ..|
T Consensus       133 ~~~~~~~~l~~~~~~~~~~~~C~~----------~~~Ca~~~~~~~~~C~GDSGgPl~~~g------~l~Gi~S~g~~~C  196 (225)
T 1a7s_A          133 SGGRLSRFPRFVNVTVTPEDQCRP----------NNVCTGVLTRRGGICNGDGGTPLVCEG------LAHGVASFSLGPC  196 (225)
T ss_dssp             TTCCCCSSCEEEEEEECCGGGSCT----------TEEEEECSSSSCBCCTTCTTCEEEETT------EEEEEEEEECSST
T ss_pred             CCCCcccccceeeeEECCHHHhcc----------CceEEeccCCCCCcccCCCcchheeCC------EEEEEEEEccCCc
Confidence            345667899999999999999975          699999655578999999999999962      789999998 556


Q ss_pred             c----eeeeccccceecceecc
Q psy1243          87 Y----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ~----wi~~v~~~~~wi~~~~~  104 (121)
                      .    +|+++..|.+||...+.
T Consensus       197 ~~~p~vyt~V~~~~~WI~~~~~  218 (225)
T 1a7s_A          197 GRGPDFFTRVALFRDWIDGVLN  218 (225)
T ss_dssp             TSSCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCcEEEEhHHhHHHHHHHhc
Confidence            3    89999999999987775

>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A

Probab=99.57  E-value=6.4e-15  Score=102.36  Aligned_cols=85  Identities=21%  Similarity=0.410  Sum_probs=70.2

Q ss_pred             cccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--Ccc----
Q psy1243          14 LTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--ACY----   87 (121)
Q Consensus        14 ~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~~~----   87 (121)
                      ..|+++.+++++.++|++.|. ...+.+.||||+. ..+.+.|.|||||||++.+.    +.+.|++|++.  .|.    
T Consensus       136 ~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~Ca~~-~~~~~~C~GDSGgPl~~~~~----~~l~Gi~S~g~~~~C~~~~p  209 (230)
T 2hlc_A          136 VILQYTYNLVIDNDRCAQEYP-PGIIVESTICGDT-SDGKSPCFGDSGGPFVLSDK----NLLIGVVSFVSGAGCESGKP  209 (230)
T ss_dssp             CBCEEEEEEEECHHHHHTTSC-TTSSCTTEEEECC-TTSCBCCTTCTTCEEEEGGG----TEEEEEEEECCTTCTTSCCC
T ss_pred             ceeEEEEEEEeCHHHhhhhhC-CCcccCCeEEecC-CCCCCcCCCCCCCeeEECcC----CEEEEEEEEeCCCCCCCCCC
Confidence            579999999999999998532 2257889999985 55679999999999999753    37899999975  553    


Q ss_pred             -eeeeccccceecceecc
Q psy1243          88 -VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -wi~~v~~~~~wi~~~~~  104 (121)
                       +|+++..|.+||...+.
T Consensus       210 ~vyt~V~~~~~WI~~~~~  227 (230)
T 2hlc_A          210 VGFSRVTSYMDWIQQNTG  227 (230)
T ss_dssp             EEEEEGGGGHHHHHHHHC
T ss_pred             CEEEEhHHhHHHHHHhhC
Confidence             89999999999987664

>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A

Probab=99.56  E-value=4.9e-15  Score=112.83  Aligned_cols=91  Identities=18%  Similarity=0.414  Sum_probs=71.8

Q ss_pred             cccccceEEEeccC---hhhhccccc----CC------CCcCCCeEEEeecCC--CCCCccCCCcceEEEeeCCcccCce
Q psy1243          12 NALTLKAARVGTLS---QESCRKEDA----YG------TRIKDSMFCAGSFQG--GADSCQGDSGGPIVCDIQGCDKGAS   76 (121)
Q Consensus        12 ~~~~L~~~~l~~~~---~~~C~~~~~----~~------~~~~~~~~Cag~~~~--~~~~C~gDsGgPLv~~~~~~~~~~~   76 (121)
                      .+..|+++.+++++   .+.|++.+.    +.      ..+.++||||++..+  +.++|+|||||||+|...+  .+++
T Consensus       369 ~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~--~~~l  446 (497)
T 1rrk_A          369 EEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRS--RFIQ  446 (497)
T ss_dssp             SSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETT--EEEE
T ss_pred             CCCcceeeeEEEecCcccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCC--EEEE
Confidence            35789999999998   789987421    11      247899999996432  5789999999999998754  4678


Q ss_pred             eEEEEeCC--Ccc--------------eeeeccccceecceecc
Q psy1243          77 LGTDRLSR--ACY--------------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        77 ~g~~~v~~--~~~--------------wi~~v~~~~~wi~~~~~  104 (121)
                      .||+|++.  .|.              +|++|..|.+||...+.
T Consensus       447 ~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~~~~WI~~~~~  490 (497)
T 1rrk_A          447 VGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQ  490 (497)
T ss_dssp             EEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTT
T ss_pred             EEEEEecCCCCCCCccccCCCCCccceeeeeHHHHHHHHHHHhC
Confidence            99999997  575              89999999999987764

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=99.52  E-value=1.2e-14  Score=104.17  Aligned_cols=89  Identities=12%  Similarity=0.126  Sum_probs=67.2

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++..+..|+++.+++++.++|++.  +...++++||||+. ..+  .|.|||||||++...+  .+++.||+|++.-+. 
T Consensus       183 ~~~~~~~L~~~~v~~~~~~~C~~~--~~~~~~~~~~Ca~~-~~~--~~~gDSGgPlv~~~~~--~~~l~GIvS~g~c~~~  255 (283)
T 3f1s_B          183 GTDLGNSLTTRPVTLVEGEECGQV--LNVTVTTRTYCERS-SVA--AMHWMDGSVVTREHRG--SWFLTGVLGSQPVGGQ  255 (283)
T ss_dssp             -------CEEEEEEEECHHHHHHH--HTSCCCTTEEEEEC-SSC--GGGBCTTCEEEEECSS--CEEEEEEECCCSGGGC
T ss_pred             CCCCCceeeEEEEeEeCHHHHhhh--hcCCCCCCeEcccC-CCC--CCCCCCCCcEEEEECC--EEEEEEEEEeCCCCCC
Confidence            346678899999999999999985  44568999999984 333  5677999999998554  568899999875222 


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|++|..|.+||...+.
T Consensus       256 ~~p~vyt~V~~y~~WI~~~~~  276 (283)
T 3f1s_B          256 AHMVLVTKVSRYSLWFKQIMN  276 (283)
T ss_dssp             SSEEEEEEGGGGHHHHHHHHT
T ss_pred             CcceEEEEhHHhHHHHHHHhh
Confidence                99999999999987764

>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*

Probab=99.51  E-value=2.4e-14  Score=98.82  Aligned_cols=77  Identities=23%  Similarity=0.403  Sum_probs=63.7

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEe--CCC
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRL--SRA   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v--~~~   85 (121)
                      .++..+..|+++.++++ .+.|++.          ||||+....+.+.|.|||||||++++      .+.|++|+  +. 
T Consensus       132 ~~~~~~~~l~~~~~~~~-~~~C~~~----------~~Ca~~~~~~~~~C~GDSGgPl~~~~------~l~Gi~S~~~g~-  193 (218)
T 2z7f_E          132 RNRGIASVLQELNVTVV-TSLCRRS----------NVCTLVRGRQAGVCFGDSGSPLVCNG------LIHGIASFVRGG-  193 (218)
T ss_dssp             SSCCBCSBCEEEEEEEE-CTTCCTT----------SEEEECTTSCCBCCTTCTTCEEEETT------EEEEEEEEESSS-
T ss_pred             CCCCccchheEeeeEEe-hhHcCcc----------eeeeccCCCCCeeCCCcCCCceEEcc------EEEEEEEeCCcc-
Confidence            34456789999999999 9999872          99999655578999999999999842      67999999  54 


Q ss_pred             c------ceeeeccccceeccee
Q psy1243          86 C------YVLSKMIRFYASVGIE  102 (121)
Q Consensus        86 ~------~wi~~v~~~~~wi~~~  102 (121)
                      |      .+|+++..|.+||...
T Consensus       194 C~~~~~p~vyt~V~~~~~WI~~~  216 (218)
T 2z7f_E          194 CASGLYPDAFAPVAQFVNWIDSI  216 (218)
T ss_dssp             TTCSSSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCCCeEEEEHHHhHHHHHHH
Confidence            5      3899999999999754

>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=113.29  Aligned_cols=89  Identities=29%  Similarity=0.597  Sum_probs=54.4

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCc-CCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRI-KDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~-~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      ..+..|+++.+++++.  |+..|  ...+ ...||||+...++.++|+|||||||++...+ +.+++.||+|++..|.  
T Consensus       461 ~~~~~L~~~~v~i~~~--C~~~~--~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~-~~~~lvGIvS~G~~C~~~  535 (565)
T 2xrc_A          461 ERVFSLQWGEVKLISN--CSKFY--GNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDAN-NVTYVWGVVSWGENCGKP  535 (565)
T ss_dssp             ------CEEEEEECSC--THHHH--TTSCCTTTEEEEEEC----------CCCEEEEECTT-CCEEEEEEECC------C
T ss_pred             CccceeeEEeeeehHH--hHHhh--ccCcCCCceEEeCCCCCCCccCCCccccceEEEeCC-CcEEEEEEEeeCCCCCCC
Confidence            4567899999999974  98854  3333 4459999976666899999999999997643 3567899999997774  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|++|..|.+||...+.
T Consensus       536 ~~PgVYTrVs~y~~WI~~~i~  556 (565)
T 2xrc_A          536 EFPGVYTKVANYFDWISYHVG  556 (565)
T ss_dssp             CCCEEEEEGGGGHHHHHHHC-
T ss_pred             CCCEEEEEHHHHHHHHHHHhc
Confidence                89999999999987764

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.47  E-value=5.3e-14  Score=102.08  Aligned_cols=88  Identities=13%  Similarity=0.133  Sum_probs=71.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc--
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC--   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~--   86 (121)
                      ++..+..|+++.+++++.++|++.  +...+.++||||+. ..  ..|.|||||||++...+  .+++.||+|++.-+  
T Consensus       224 ~~~~~~~L~~~~v~~~~~~~C~~~--~~~~~~~~~~Ca~~-~~--~~~~gDsGgPl~~~~~~--~~~l~Gi~S~g~~~~~  296 (317)
T 3h5c_B          224 GTDLGNSLTTRPVTLVEGEECGQV--LNVTVTTRTYCERS-SV--AAMHWMDGSVVTREHRG--SWFLTGVLGSQPVGGQ  296 (317)
T ss_dssp             CCSSSCCCBCCEEEEECHHHHHHH--HTCCCCTTEEEEEC-SC--CCCCCCTTCEEEEEETT--EEEEEEEECCCCSSCC
T ss_pred             CCCCCccceEEEEEEECHHHHhhh--hcCcCCCceeECCC-CC--CCcCCCCCCCEEEecCC--EEEEEEEEEECCCCCC
Confidence            446678899999999999999985  44568899999984 33  36789999999998665  46789999987522  


Q ss_pred             ---ceeeeccccceecceec
Q psy1243          87 ---YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ---~wi~~v~~~~~wi~~~~  103 (121)
                         .+|++|..|.+||...+
T Consensus       297 ~~p~vyt~V~~y~~WI~~~i  316 (317)
T 3h5c_B          297 AHMVLVTKVSRYSLWFKQIM  316 (317)
T ss_dssp             TTEEEEEEGGGCHHHHHHHH
T ss_pred             CcceEEEEhHHhHHHHHHHh
Confidence               29999999999997643

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.44  E-value=1.2e-13  Score=109.60  Aligned_cols=91  Identities=18%  Similarity=0.421  Sum_probs=73.3

Q ss_pred             cccccceEEEeccC---hhhhcccccC----------CCCcCCCeEEEeecC--CCCCCccCCCcceEEEeeCCcccCce
Q psy1243          12 NALTLKAARVGTLS---QESCRKEDAY----------GTRIKDSMFCAGSFQ--GGADSCQGDSGGPIVCDIQGCDKGAS   76 (121)
Q Consensus        12 ~~~~L~~~~l~~~~---~~~C~~~~~~----------~~~~~~~~~Cag~~~--~~~~~C~gDsGgPLv~~~~~~~~~~~   76 (121)
                      .+..|++..+++++   .+.|++.+.+          ...+.+.||||+...  .+.++|+|||||||++...+  .+++
T Consensus       611 ~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~--~~~l  688 (741)
T 3hrz_D          611 EEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRS--RFIQ  688 (741)
T ss_dssp             SSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETT--EEEE
T ss_pred             cccccccceeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCC--eEEE
Confidence            35679999999998   8899984321          135889999999644  26789999999999998764  5688


Q ss_pred             eEEEEeCC--Cc--------------ceeeeccccceecceecc
Q psy1243          77 LGTDRLSR--AC--------------YVLSKMIRFYASVGIEAT  104 (121)
Q Consensus        77 ~g~~~v~~--~~--------------~wi~~v~~~~~wi~~~~~  104 (121)
                      .||+|++.  .|              .+|++|..|.+||...+.
T Consensus       689 vGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~  732 (741)
T 3hrz_D          689 VGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQ  732 (741)
T ss_dssp             EEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTT
T ss_pred             EEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhc
Confidence            99999986  45              689999999999987764

>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2

Probab=99.43  E-value=2e-13  Score=94.18  Aligned_cols=77  Identities=25%  Similarity=0.430  Sum_probs=61.9

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Cc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-AC-   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~-   86 (121)
                      ++..+..|+++.++++ ...|+..          ++|++....+.+.|.|||||||++++      .+.|+++++. .| 
T Consensus       136 ~~~~~~~l~~~~~~~~-~~~C~~~----------~~Ca~~~~~~~~~C~GDSGgPL~~~~------~l~Gi~s~~~~gC~  198 (221)
T 1fuj_A          136 HDPPAQVLQELNVTVV-TFFCRPH----------NICTFVPRRKAGICFGDSGGPLICDG------IIQGIDSFVIWGCA  198 (221)
T ss_dssp             SSCBCSBCEEEEEEEE-CTTCCTT----------EEEEECSSSSCBCCTTCTTCEEEETT------EEEEEEEECSSSTT
T ss_pred             CCCHHHHhhcccceEE-eeecCCc----------eeeeccCCCCCCCCCCCCCCeeEECC------EEeEEEEEeccCCC
Confidence            4556788999999999 8889861          99998655578899999999999942      5789988832 13 


Q ss_pred             -----ceeeeccccceeccee
Q psy1243          87 -----YVLSKMIRFYASVGIE  102 (121)
Q Consensus        87 -----~wi~~v~~~~~wi~~~  102 (121)
                           .+|+++..|.+||...
T Consensus       199 ~~~~p~vyt~v~~~~~WI~~~  219 (221)
T 1fuj_A          199 TRLFPDFFTRVALYVDWIRST  219 (221)
T ss_dssp             CSSSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCcEEEeHHHHHHHHHHH
Confidence                 3899999999999754

>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*

Probab=99.42  E-value=1.1e-13  Score=105.75  Aligned_cols=85  Identities=16%  Similarity=0.365  Sum_probs=66.2

Q ss_pred             ceEEEec---cChhhhccccc-----C------CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEe
Q psy1243          17 KAARVGT---LSQESCRKEDA-----Y------GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRL   82 (121)
Q Consensus        17 ~~~~l~~---~~~~~C~~~~~-----~------~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v   82 (121)
                      +++.+.+   ++.+.|++.+.     +      ...+.++||||+. .++.++|+|||||||+|...+  .+++.||+|+
T Consensus       380 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~-~~~~~~C~GDSGGPL~~~~~~--~~~l~GIvS~  456 (509)
T 2odp_A          380 SKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLERRF--RFFQVGLVSW  456 (509)
T ss_dssp             CEEEEEEECTHHHHHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECC-TTCCCCCGGGTTCEEEEEETT--EEEEEEEEEE
T ss_pred             ceeeEEEecCccHHHHHHHhhcccccccccccccccccCCEEEeCC-CCCCcccCCCccCceEEEECC--eEEEEEEEEE
Confidence            4555655   46899988421     2      1347899999995 567899999999999998754  4678999999


Q ss_pred             CC--Ccc---------------------eeeeccccceecceecc
Q psy1243          83 SR--ACY---------------------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        83 ~~--~~~---------------------wi~~v~~~~~wi~~~~~  104 (121)
                      +.  .|.                     +|++|..|.+||...+.
T Consensus       457 G~~~~C~~~~~~~~~~~~~~Pg~~y~~~vyt~V~~~~~WI~~~~~  501 (509)
T 2odp_A          457 GLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHLG  501 (509)
T ss_dssp             ESCCTTC-----CCCCCCCTTCSSCCCEEEEEGGGCHHHHHHHHT
T ss_pred             cCCCCCCCcccccccccCcccCCCCCCceeeeHHHHhHHHHHHhC
Confidence            96  473                     78999999999987764

>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A

Probab=98.92  E-value=2e-10  Score=78.76  Aligned_cols=70  Identities=11%  Similarity=0.086  Sum_probs=55.7

Q ss_pred             cccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc----c
Q psy1243          12 NALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC----Y   87 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~----~   87 (121)
                      .+..|+++.+++++.+.|...+             +    +.+.|.|||||||++.+     ..+.||+|++..|    .
T Consensus       140 ~~~~l~~~~~~~~~~~~c~~~~-------------~----~~~~C~GDSGgPl~~~~-----g~lvGi~S~g~~c~~~p~  197 (215)
T 1p3c_A          140 TGKVSQWEMSGSVTREDTNLAY-------------Y----TIDTFSGNSGSAMLDQN-----QQIVGVHNAGYSNGTING  197 (215)
T ss_dssp             HSSCCCEEEEEECCEECSSEEE-------------E----CCCCCTTCTTCEEECTT-----SCEEEECCEEEGGGTEEE
T ss_pred             ccceechhccCccCcccchhee-------------e----ccccCCCCCCCeeEccC-----CeEEEEEecccCCCccCc
Confidence            4567899999999999998732             1    35799999999999852     2678998887655    3


Q ss_pred             eeeeccccceecceec
Q psy1243          88 VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 wi~~v~~~~~wi~~~~  103 (121)
                      +|+++..|.+||...+
T Consensus       198 v~t~v~~~~~WI~~~~  213 (215)
T 1p3c_A          198 GPKATAAFVEFINYAK  213 (215)
T ss_dssp             EEBCCHHHHHHHHHHH
T ss_pred             eeEechHHHHHHHHHh
Confidence            8999999999997643

>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*

Probab=98.67  E-value=1.2e-08  Score=72.88  Aligned_cols=56  Identities=16%  Similarity=0.210  Sum_probs=39.1

Q ss_pred             CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Cc--------ceeeeccccce
Q psy1243          37 TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-AC--------YVLSKMIRFYA   97 (121)
Q Consensus        37 ~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~--------~wi~~v~~~~~   97 (121)
                      ..+.+.|+|++...+..++|.|||||||++.     .+.+.||+|++. .|        .+|+++..|.+
T Consensus       171 ~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~-----~~~~~Gi~s~g~~~C~~~~~~~p~vyt~v~~~~~  235 (268)
T 1arb_A          171 GGAGTTHLNVQWQPSGGVTEPGSSGSPIYSP-----EKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWT  235 (268)
T ss_dssp             SSSCSSEEEEECCTTSCCCCTTCTTCEEECT-----TSCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHH
T ss_pred             ccccCCeEEEeeecCCCCCccCcccCCcEee-----CCEEEEEEeecCcccCCCCCCCCceEEEeeeeec
Confidence            3467889999843212379999999999973     235788888885 35        37777765543

>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...

Probab=98.30  E-value=1.1e-07  Score=63.78  Aligned_cols=42  Identities=19%  Similarity=0.361  Sum_probs=34.5

Q ss_pred             ccCCCcceEEEeeCCcccCceeEEEEeCCCc------ceeeeccccceecceec
Q psy1243          56 CQGDSGGPIVCDIQGCDKGASLGTDRLSRAC------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        56 C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~------~wi~~v~~~~~wi~~~~  103 (121)
                      |.|||||||++.+      ...|+++++..|      .+|+++..|.+||..++
T Consensus       137 c~GDSGGPlv~~~------~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~~~l  184 (185)
T 2qa9_E          137 EPGDSGGPLYSGT------RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYGVSV  184 (185)
T ss_dssp             CTTCTTCEEEETT------EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCEE
T ss_pred             CCCCccceEEECC------EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhCcEE
Confidence            9999999999741      568998887543      49999999999998653

>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}

Probab=97.70  E-value=1.6e-05  Score=53.44  Aligned_cols=52  Identities=17%  Similarity=0.168  Sum_probs=35.4

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC---Ccc-----eeeeccccceecceec
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR---ACY-----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~---~~~-----wi~~v~~~~~wi~~~~  103 (121)
                      ..++|++     .+.|.|||||||++.     .+...|+++++.   .|.     .+.. ..|.+||...+
T Consensus       143 ~~~~~~~-----~~~~~GdSGGPl~~~-----~g~lvGI~s~g~~~~~~~~~~~~~~~~-~~~~~wI~~~~  202 (204)
T 2vid_A          143 GSSIVYS-----AHTESGNSGSPVLNS-----NNELVGIHFASDVKNDDNRNAYGVYFT-PEIKKFIAENI  202 (204)
T ss_dssp             TTEEEEC-----CCCCGGGTTCEEECT-----TSCEEEEEEEECC---CCCCEEEECCC-HHHHHHHHHHS
T ss_pred             CCeEEEe-----cccCCCCccCcEECC-----CCeEEEEEecCccCCCcccccceeEeC-HHHHHHHHhhc
Confidence            4566653     478999999999953     235789988875   232     2223 67899997654

>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}

Probab=97.69  E-value=1.1e-05  Score=55.56  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=28.3

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .|+||.        |.|||||||++...+  .+.+.||+|++..|.
T Consensus       159 ~~~Ca~--------~~GDSGGPlv~~~~g--~~~lvGIvS~G~gc~  194 (218)
T 3cp7_A          159 GIPCNM--------TGGSSGGPWFLGNGT--GGAQNSTNSYGYTFL  194 (218)
T ss_dssp             EEECCC--------CTTCTTCEEEESSSS--SSCEEEECCEEETTE
T ss_pred             EecCCC--------CCCCcCCeeEEccCC--CeEEEEEEccccCCC
Confidence            788973        469999999997433  346899999998775

>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1

Probab=97.63  E-value=2.7e-05  Score=55.16  Aligned_cols=52  Identities=13%  Similarity=0.123  Sum_probs=35.0

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----eeeeccccceecceec
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----wi~~v~~~~~wi~~~~  103 (121)
                      ..++|.     ..++|.|||||||++.     .+.+.||++++..|.    ++. +..|.+||...+
T Consensus       155 ~~~i~~-----~~~~c~GdSGGPLv~~-----~g~lvGIvS~G~~~~~~~~~~~-~~~~~~wI~~~i  210 (268)
T 1wcz_A          155 GEAMQY-----DLSTTGGNSGSPVFNE-----KNEVIGIHWGGVPNEFNGAVFI-NENVRNFLKQNI  210 (268)
T ss_dssp             TTEEEE-----SBCCCTTCTTCEEECT-----TSCEEEEEEEEETTTEEEEEEC-CHHHHHHHHHHC
T ss_pred             CCeEEE-----ecccCCCCccCeEEcc-----CCEEEEEEeCCccCCcceeEEc-CHHHHHHHHHHH
Confidence            345654     3579999999999953     235688988876553    233 466788876433

>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A

Probab=97.60  E-value=3.9e-05  Score=51.60  Aligned_cols=51  Identities=14%  Similarity=0.136  Sum_probs=34.0

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-------e-eeeccccceecceec
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-------V-LSKMIRFYASVGIEA  103 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-------w-i~~v~~~~~wi~~~~  103 (121)
                      ..++|..     .+.|.|||||||++..     ....||++++..|.       . |+  ..|++||...+
T Consensus       140 ~~~~~~~-----~~~~~GdSGGPl~~~~-----g~lvGI~s~g~~~~~~~~~~~v~~~--~~~~~wI~~~~  198 (200)
T 2w7s_A          140 GTFMEFD-----AYAQPGNSGSPVLNSK-----HELIGILYAGSGKDESEKNFGVYFT--PQLKEFIQNNI  198 (200)
T ss_dssp             TTEEEEC-----SCCCTTCTTCEEECTT-----SCEEEEEEEEC----CCCEEEEECC--HHHHHHHHHTS
T ss_pred             CCEEEEc-----ceeCCCCccCeEECcC-----CEEEEEEeccccCCCCccceeeecH--HHHHHHHHhhc
Confidence            3456653     4789999999999631     35689988876541       2 33  67889997654

>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A

Probab=97.58  E-value=4e-05  Score=54.43  Aligned_cols=45  Identities=16%  Similarity=0.166  Sum_probs=32.2

Q ss_pred             CCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc----eeeeccccceecceec
Q psy1243          53 ADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        53 ~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~----wi~~v~~~~~wi~~~~  103 (121)
                      .++|.|||||||++.     .+.+.||++++..|.    ++. +..|.+||...+
T Consensus       162 ~~~c~GdSGGPLv~~-----~g~lvGIvS~G~~~~~~~~~~~-~~~~~~wI~~~i  210 (274)
T 2o8l_A          162 LSTTGGNSGSPVFNE-----KNEVIGIHWGGVPNEFNGAVFI-NENVRNFLKQNI  210 (274)
T ss_dssp             CCCCTTCTTCEEECT-----TSCEEEEEEEEETTTEEEEEEC-CHHHHHHHHHHC
T ss_pred             cccCCCCchhheecc-----CCeEEEEEeCcccCCCCceEEe-cHHHHHHHHHHH
Confidence            579999999999953     235789988886663    332 466788886443

>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A

Probab=97.26  E-value=9.9e-05  Score=49.09  Aligned_cols=43  Identities=21%  Similarity=0.361  Sum_probs=33.2

Q ss_pred             CCccCCCcceEEEeeCCcccCceeEEEEeCCC-c-----ceeeeccccceeccee
Q psy1243          54 DSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C-----YVLSKMIRFYASVGIE  102 (121)
Q Consensus        54 ~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~-----~wi~~v~~~~~wi~~~  102 (121)
                      ..|.|||||||++.+      ...||++++.. |     .+|+++..+++|+..+
T Consensus       131 c~~~GDSGGPlv~~~------~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l~v~  179 (181)
T 2sga_A          131 CAQPGDSGGSLFAGS------TALGLTSGGSGNCRTGGTTFYQPVTEALSAYGAT  179 (181)
T ss_dssp             CCCTTCTTCEEEETT------EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTEE
T ss_pred             ccCCCCCCCEEEECC------EEEEEEEeeCCCCcCCCceEEEEHHHHHHhcCcE
Confidence            346899999999742      46888888753 3     5999999999998754

>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A

Probab=96.45  E-value=0.0011  Score=45.81  Aligned_cols=29  Identities=21%  Similarity=0.296  Sum_probs=22.8

Q ss_pred             CCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243          53 ADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus        53 ~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      .++|.|||||||++.     .+...||++++..|
T Consensus       188 ~~~c~GdSGGPl~~~-----~g~lvGI~s~g~~c  216 (242)
T 1agj_A          188 GFTVPGNSGSGIFNS-----NGELVGIHSSKVSH  216 (242)
T ss_dssp             CCCCGGGTTCEEECT-----TSEEEEEEEEEEEC
T ss_pred             CCcCCCCCchHhccc-----CCEEEEEEeccccc
Confidence            368999999999963     23578999988665

>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1

Probab=96.18  E-value=0.0037  Score=41.85  Aligned_cols=48  Identities=23%  Similarity=0.230  Sum_probs=32.6

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c-----ceeeeccccceec
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C-----YVLSKMIRFYASV   99 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~-----~wi~~v~~~~~wi   99 (121)
                      .+++|+.     ...|.|||||||++.+      ...|+.+++.. |     .+|+.+..+++.+
T Consensus       129 ~~~i~t~-----~~~~~GdSGgpl~~~~------~~vGi~s~~~~~~~~~~~~~~~~i~~~~~~l  182 (187)
T 1hpg_A          129 YNMVRTT-----ACSAGGDSGGAHFAGS------VALGIHSGSSGCSGTAGSAIHQPVTEALSAY  182 (187)
T ss_dssp             EEEEEEC-----CCCCTTCTTCEEEETT------EEEEEEEEESCCBTTBCCCEEEEHHHHHHHH
T ss_pred             eeeEEec-----cccCCCCCCCeEEECC------EEEEEEEeeCCCCCCCCceEEEEHHHHHHHc
Confidence            3467764     3578999999999742      45888877643 3     3677776665544

>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}

Probab=95.94  E-value=0.0092  Score=40.31  Aligned_cols=35  Identities=20%  Similarity=0.243  Sum_probs=25.0

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA   85 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~   85 (121)
                      ..++|+.     ...|.|||||||++..     ....|+++++..
T Consensus       144 ~~~i~~~-----~~~~~GdSGGPlv~~~-----g~lvGI~s~g~~  178 (210)
T 2as9_A          144 DNILNFD-----AYIEPGNSGSPVLNSN-----NEVIGVVYGGIG  178 (210)
T ss_dssp             TTEEEEE-----CCCCTTCTTCEEECTT-----SCEEEEECCSCC
T ss_pred             CCeEEEc-----CccCCCCccCcEECCC-----CeEEEEEecccc
Confidence            3466764     3689999999999632     246888887753

>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A

Probab=94.99  E-value=0.011  Score=40.88  Aligned_cols=27  Identities=26%  Similarity=0.259  Sum_probs=20.3

Q ss_pred             CCCccCCCcceEEEeeCCcccCceeEEEEeCC
Q psy1243          53 ADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR   84 (121)
Q Consensus        53 ~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~   84 (121)
                      .++|.|||||||++.     .+...||++++.
T Consensus       179 ~~~~~GdSGGPlv~~-----~g~lvGI~s~g~  205 (246)
T 1qtf_A          179 GYTEVGNSGSGIFNL-----KGELIGIHSGKG  205 (246)
T ss_dssp             SCCCGGGTTCEEECT-----TCCEEEEEEEEE
T ss_pred             CCCCCCCchhheECC-----CCEEEEEEeccc
Confidence            468999999999953     234688887763

>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}

Probab=92.58  E-value=0.026  Score=37.78  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=22.2

Q ss_pred             cCCCcceEEEeeCCcccCceeEEEEeCCC-c-----ceeeeccccc
Q psy1243          57 QGDSGGPIVCDIQGCDKGASLGTDRLSRA-C-----YVLSKMIRFY   96 (121)
Q Consensus        57 ~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~-----~wi~~v~~~~   96 (121)
                      .|||||||++++      ...|+++++.. |     .+|..+..+.
T Consensus       137 ~GDSGgpl~~~~------~~vGi~s~g~~~c~~~~~~~~~pi~~~l  176 (186)
T 2pfe_A          137 GGDSGGPWLTGS------QAQGVTSGGTGDCRSGGITFFQPINPLL  176 (186)
T ss_dssp             TTCTTCEEEETT------EEEEEEEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCCccCeEEECC------EEEEEEeecCCCCCCCCcEEEEEHHHHH
Confidence            599999999632      35788887642 3     3555555443

>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}

Probab=92.44  E-value=0.053  Score=36.30  Aligned_cols=41  Identities=17%  Similarity=0.340  Sum_probs=29.4

Q ss_pred             cCCCcceEEEeeCCcccCceeEEEEeCCC------cceeeeccccceecceec
Q psy1243          57 QGDSGGPIVCDIQGCDKGASLGTDRLSRA------CYVLSKMIRFYASVGIEA  103 (121)
Q Consensus        57 ~gDsGgPLv~~~~~~~~~~~~g~~~v~~~------~~wi~~v~~~~~wi~~~~  103 (121)
                      .|||||||++.  +    ...|+++++..      ..+|..+..++++...++
T Consensus       134 ~GDSGgpl~~~--~----~~vGi~s~~~~~c~~~~~~~~~pi~~~l~~~gv~l  180 (189)
T 2ea3_A          134 PGDSGGSLLAG--N----QAQGVTSGGSGNCRTGGTTFFQPVNPILQAYGLRM  180 (189)
T ss_dssp             TTCTTCEEEET--T----EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHTCCB
T ss_pred             CCCccCeEEEC--C----EEEEEEeecCCCCCCCCcEEEEEHHHHHHHCCeEE
Confidence            69999999962  2    45788777643      247888888888775554

>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A

Probab=92.12  E-value=0.12  Score=35.39  Aligned_cols=26  Identities=46%  Similarity=0.547  Sum_probs=18.9

Q ss_pred             CCCccCCCcceEEEeeCCcccCceeEEEEeC
Q psy1243          53 ADSCQGDSGGPIVCDIQGCDKGASLGTDRLS   83 (121)
Q Consensus        53 ~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~   83 (121)
                      ...|.|||||||++..     ....|+++..
T Consensus       176 ~~~~~GdSGGPLv~~~-----G~vvGI~s~~  201 (237)
T 3k6y_A          176 ADVEQGDSGGPLIDLN-----GQVLGVVFGA  201 (237)
T ss_dssp             SCCCTTCTTCEEECTT-----SCEEEEEEEE
T ss_pred             CccCCCccHHHEECCC-----CEEEEEEEee
Confidence            4689999999999532     2357886654

>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1

Probab=92.01  E-value=0.26  Score=35.48  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=25.2

Q ss_pred             eEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEE
Q psy1243          18 AARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC   66 (121)
Q Consensus        18 ~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~   66 (121)
                      .+..-+++...|.............++|+.     ...|.|||||||+.
T Consensus       136 ~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d-----~~~~~G~SGGPl~~  179 (325)
T 1lcy_A          136 TITSGIVSSAQRPARDLGLPQTNVEYIQTD-----AAIDFGNAGGPLVN  179 (325)
T ss_dssp             CCEEEEBCSCSCC---------CCCCEEES-----SCCSTTTTTSEEEE
T ss_pred             cEEeEEEecccccccccCCCCCCCCEEEEc-----CCCCCCCccccEEC
Confidence            344556666666431100012345789984     36899999999995

>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*

Probab=91.65  E-value=0.026  Score=39.96  Aligned_cols=53  Identities=17%  Similarity=0.159  Sum_probs=36.0

Q ss_pred             eEEEeecCCCCCCccCCCcc-----eEEEeeCCccc-CceeEEEEeCCCcceeeeccccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGG-----PIVCDIQGCDK-GASLGTDRLSRACYVLSKMIRFY   96 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg-----PLv~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~~~   96 (121)
                      -.|.|. .++--.|..+.++     .++..+.+|.. ..+.+|++|+.|.+||.+++...
T Consensus       193 ~~C~GD-SGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~~  251 (290)
T 1fiw_A          193 DTCQGD-SGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKIGST  251 (290)
T ss_dssp             BCCTTC-TTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHHHCHH
T ss_pred             eeCCCC-CchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHhCcc
Confidence            467773 5555567654222     33456678975 45667799999999999988643

>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A

Probab=91.41  E-value=0.15  Score=36.59  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=22.6

Q ss_pred             CCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEe
Q psy1243          40 KDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRL   82 (121)
Q Consensus        40 ~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v   82 (121)
                      ...++|+.     ...|.|||||||+...     ....|+.++
T Consensus       154 ~~~~i~~d-----~~~~~G~SGGPlv~~~-----G~vvGI~s~  186 (324)
T 1y8t_A          154 VLDAIQTD-----AAINPGNSGGALVNMN-----AQLVGVNSA  186 (324)
T ss_dssp             CEEEEEEC-----SCCCTTCTTEEEECTT-----SEEEEEEEE
T ss_pred             cCCEEEEc-----CCCCCCCccCcEECCC-----CeEEEEEee
Confidence            34678874     4689999999999632     234666444

>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1

Probab=91.39  E-value=0.18  Score=34.82  Aligned_cols=33  Identities=24%  Similarity=0.433  Sum_probs=22.7

Q ss_pred             CCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC
Q psy1243          41 DSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS   83 (121)
Q Consensus        41 ~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~   83 (121)
                      ..++|+.     ...|.|||||||+..     .....|+.++.
T Consensus       169 ~~~i~td-----a~i~~G~SGGPLv~~-----~G~vvGI~s~~  201 (239)
T 1l1j_A          169 VGLIQTD-----AAINPGNSGGPLLNI-----HGEVIGINTAI  201 (239)
T ss_dssp             EEEEEES-----SCCCTTTTTSEEECS-----SSEEEEEECCC
T ss_pred             CCEEEEC-----CCCCCCCccHHhccC-----CCeEEEEEeee
Confidence            3577863     468999999999953     12456776554

>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}

Probab=89.62  E-value=0.14  Score=34.63  Aligned_cols=50  Identities=18%  Similarity=0.287  Sum_probs=33.3

Q ss_pred             eEEEeecCCCCCCccCCCcceEEEeeCC-ccc-CceeEEEEeCCCcceeeeccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGGPIVCDIQG-CDK-GASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGgPLv~~~~~-~~~-~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      -.|.|. .++.-.|.+.. -.++..+.+ |.. ..+..|++++.|.+||.+++.
T Consensus       178 ~~C~GD-SGgPL~~~~~l-~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~  229 (238)
T 4e7n_A          178 DTCKGD-SGGPLICNGQF-QGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA  229 (238)
T ss_dssp             BCCTTC-TTCEEEETTEE-EEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred             ccCCCC-CCcceEECCEE-EEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence            457763 45555665432 234555655 876 456777999999999999884

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=88.31  E-value=0.047  Score=39.84  Aligned_cols=50  Identities=16%  Similarity=0.161  Sum_probs=34.5

Q ss_pred             EEEeecCCCCCCccCCCcc-----eEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          44 FCAGSFQGGADSCQGDSGG-----PIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        44 ~Cag~~~~~~~~C~gDsGg-----PLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .|.|. .++.-.|.+..++     .++..+.+|+...+.+||+|+.|.+||++++.
T Consensus       291 ~C~GD-SGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i~  345 (347)
T 4f4o_C          291 TCYGD-AGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTTIA  345 (347)
T ss_dssp             CCTTC-TTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHHHT
T ss_pred             CCCCC-CCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence            57762 4444456543333     34566788987767777999999999998874

>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A

Probab=87.76  E-value=0.46  Score=32.45  Aligned_cols=25  Identities=32%  Similarity=0.517  Sum_probs=18.1

Q ss_pred             CCccCCCcceEEEeeCCcccCceeEEEEeC
Q psy1243          54 DSCQGDSGGPIVCDIQGCDKGASLGTDRLS   83 (121)
Q Consensus        54 ~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~   83 (121)
                      ..|.|||||||+...     ....||.++.
T Consensus       183 ~i~~G~SGGPLv~~~-----G~vVGI~s~~  207 (231)
T 3tjo_A          183 IINYGNAGGPLVNLD-----GEVIGINTLK  207 (231)
T ss_dssp             CCCTTTTTSEEECTT-----SCEEEEEEEE
T ss_pred             CcCCCCchhHeecCC-----CeEEEEEeEE
Confidence            578899999999421     2457887664

>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A

Probab=87.70  E-value=0.67  Score=33.10  Aligned_cols=34  Identities=29%  Similarity=0.595  Sum_probs=22.4

Q ss_pred             CCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC
Q psy1243          40 KDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS   83 (121)
Q Consensus        40 ~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~   83 (121)
                      ...++|+.     ...|.|||||||+...     ....|+.++.
T Consensus       150 ~~~~i~~d-----~~~~~G~SGGPl~~~~-----G~vvGI~s~~  183 (318)
T 1te0_A          150 RQNFLQTD-----ASINHGNSGGALVNSL-----GELMGINTLS  183 (318)
T ss_dssp             SCCSEEES-----SCCCTTTTTSEEECTT-----CCEEEEEECC
T ss_pred             cCCEEEEC-----CCCCCCCCcCceECCC-----CeEEEEEeee
Confidence            34578863     3689999999999631     1345665443

>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B

Probab=86.86  E-value=0.15  Score=34.59  Aligned_cols=53  Identities=17%  Similarity=0.163  Sum_probs=35.5

Q ss_pred             CeEEEeecCCCCCCccC-CCcc----eEEEeeCCcccCc-eeEEEEeCCCcceeeecccc
Q psy1243          42 SMFCAGSFQGGADSCQG-DSGG----PIVCDIQGCDKGA-SLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~g-DsGg----PLv~~~~~~~~~~-~~g~~~v~~~~~wi~~v~~~   95 (121)
                      .-.|.|. .++.-.|.+ +.|.    .++..+.+|.... +..|++++.|.+||.+++..
T Consensus       191 ~~~C~GD-sGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~  249 (251)
T 3gov_B          191 KDACAGD-SGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVTGV  249 (251)
T ss_dssp             CBCCTTC-TTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHHCC
T ss_pred             CccCCCC-CCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHhcc
Confidence            3567773 455556764 3332    3445667887644 56679999999999988754

>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A

Probab=86.61  E-value=0.55  Score=32.09  Aligned_cols=25  Identities=36%  Similarity=0.635  Sum_probs=17.6

Q ss_pred             CCCccCCCcceEEEeeCCcccCceeEEEEe
Q psy1243          53 ADSCQGDSGGPIVCDIQGCDKGASLGTDRL   82 (121)
Q Consensus        53 ~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v   82 (121)
                      ...|.|||||||+.. .    ....|+.++
T Consensus       169 ~~i~~G~SGGPlv~~-~----G~vvGI~s~  193 (237)
T 3lgi_A          169 ASINHGNSGGALVNS-L----GELMGINTL  193 (237)
T ss_dssp             SCCCTTCTTCEEECT-T----CCEEEEECC
T ss_pred             CccCCCCchHHeeCC-C----CeEEEEEee
Confidence            357999999999953 1    235777655

>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}

Probab=86.31  E-value=0.23  Score=34.33  Aligned_cols=52  Identities=23%  Similarity=0.223  Sum_probs=34.3

Q ss_pred             eEEEeecCCCCCCccCCCcc----eEEEeeCCcccC-ceeEEEEeCCCcceeeeccccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGG----PIVCDIQGCDKG-ASLGTDRLSRACYVLSKMIRFY   96 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg----PLv~~~~~~~~~-~~~g~~~v~~~~~wi~~v~~~~   96 (121)
                      -.|.|. .++--.|..+ |.    .++..+.+|... .+.+|++|+.|.+||+++++-.
T Consensus       215 ~~C~GD-SGGPLv~~~~-~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~~~~~~~  271 (276)
T 2vnt_A          215 DSCQGD-SGGPLVCSLQ-GRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTKEE  271 (276)
T ss_dssp             CCCTTC-TTCEEEEEET-TEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHSCC
T ss_pred             CCCCCC-CCCeEEEeeC-CeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhhhh
Confidence            457663 4444456533 22    234566888764 4666799999999999988644

>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2

Probab=86.08  E-value=0.3  Score=32.80  Aligned_cols=50  Identities=22%  Similarity=0.234  Sum_probs=34.7

Q ss_pred             eEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      -.|.|. .++.-.|.+ .--.++..+.+|....+..|++++.|.+||.++++
T Consensus       172 ~~C~GD-SGgPL~~~~-~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~~~~  221 (222)
T 1eq9_A          172 GACHGD-SGGPLVANG-AQIGIVSFGSPCALGEPDVYTRVSSFVSWINANLK  221 (222)
T ss_dssp             BCCTTC-TTCEEEETT-EEEEEEEECSTTTSSSCEEEEEGGGGHHHHHHTSC
T ss_pred             eeeeCC-ccceEEECC-EEEEEEEECCCcCCCCCCEEEEHHHHHHHHHHHhh
Confidence            467773 455556653 22345566788987667778999999999988763

>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*

Probab=85.34  E-value=0.35  Score=32.68  Aligned_cols=52  Identities=17%  Similarity=0.187  Sum_probs=34.1

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEee-CCccc-CceeEEEEeCCCcceeeecccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDI-QGCDK-GASLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~-~~~~~-~~~~g~~~v~~~~~wi~~v~~~   95 (121)
                      .-.|.|. .++.-.|.+. =-.++..+ .+|.. ..+..|++++.|.+||.+++.-
T Consensus       170 ~~~C~GD-SGgPL~~~~~-l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~  223 (231)
T 2aiq_A          170 KDTCKGD-SGGPLICNGQ-FQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG  223 (231)
T ss_dssp             CBCCTTC-TTCEEEETTE-EEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred             CcccCCc-CCCcEEECCE-EEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence            3467763 4445566532 12344555 67876 4567779999999999998854

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}

Probab=85.00  E-value=0.16  Score=37.86  Aligned_cols=52  Identities=23%  Similarity=0.217  Sum_probs=35.1

Q ss_pred             eEEEeecCCCCCCccCCC-cc----eEEEeeCCcccCc-eeEEEEeCCCcceeeecccc
Q psy1243          43 MFCAGSFQGGADSCQGDS-GG----PIVCDIQGCDKGA-SLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDs-Gg----PLv~~~~~~~~~~-~~g~~~v~~~~~wi~~v~~~   95 (121)
                      -.|.|. .++--.|.... |.    .++..+.+|.... +.+|++|+.|.+||.++++-
T Consensus       364 d~C~GD-SGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs~y~~WI~~~i~~  421 (424)
T 3nxp_A          364 DACEGD-SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  421 (424)
T ss_dssp             CTTCSC-TTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECTTCHHHHHHHHHH
T ss_pred             ccCCCc-CCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
Confidence            457763 55555676532 32    3445667898654 55569999999999988753

>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B

Probab=84.60  E-value=0.24  Score=31.49  Aligned_cols=51  Identities=20%  Similarity=0.171  Sum_probs=33.3

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEee-CCccc-CceeEEEEeCCCcceeeeccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDI-QGCDK-GASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~-~~~~~-~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .-.|.|. .++.-.|.+. =-.++..+ .+|.. ..+..|++|+.|.+||.+++.
T Consensus        97 ~~~C~GD-sGgPL~~~g~-l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~  149 (152)
T 2pka_B           97 KDTCMGD-SGGPLICNGM-WQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT  149 (152)
T ss_dssp             CBCCTTC-TTCEEEETTE-EEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CcccCCc-cccceEECCE-EEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence            3567763 4555566532 12334455 67875 456777999999999988774

>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...

Probab=84.17  E-value=0.19  Score=35.31  Aligned_cols=69  Identities=20%  Similarity=0.176  Sum_probs=41.8

Q ss_pred             ccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCC-Ccc----eEEEeeCCcccC-ceeEEEEeCCCcceeeeccc
Q psy1243          23 TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGD-SGG----PIVCDIQGCDKG-ASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        23 ~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gD-sGg----PLv~~~~~~~~~-~~~g~~~v~~~~~wi~~v~~   94 (121)
                      +.+...|...  ....-...-.|.|. .++.-.|... .|.    .++..+.+|... .+..|++|+.|.+||.+++.
T Consensus       211 i~~~~iCag~--~~~~~~~~~~C~GD-SGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~  285 (289)
T 2bdy_A          211 ITDNMFCAGY--KPDEGKRGDACEGD-SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID  285 (289)
T ss_dssp             CCTTEEEECC--CGGGCCCCBCCTTC-TTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred             CCCCEEeccC--CCCCCCCCccCCCC-CccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHH
Confidence            3455667641  11001123568773 5555567653 232    344567889864 45667999999999998875

>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}

Probab=83.96  E-value=0.95  Score=32.80  Aligned_cols=14  Identities=43%  Similarity=0.750  Sum_probs=12.3

Q ss_pred             CCCccCCCcceEEE
Q psy1243          53 ADSCQGDSGGPIVC   66 (121)
Q Consensus        53 ~~~C~gDsGgPLv~   66 (121)
                      ...|.|||||||+.
T Consensus       173 a~i~~G~SGGPLvn  186 (348)
T 3qo6_A          173 AAINPGNSGGPLLD  186 (348)
T ss_dssp             SCCCTTCTTCEEEC
T ss_pred             CCcCCCCcHHHhhC
Confidence            46899999999995

>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}

Probab=83.84  E-value=0.28  Score=32.91  Aligned_cols=52  Identities=12%  Similarity=0.003  Sum_probs=34.5

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeecccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~~   95 (121)
                      .-.|.|. .++.-.|.+. =-.++..+.+|....+..|++++.|.+||.+++.-
T Consensus       179 ~~~C~GD-sGgPl~~~~~-l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~  230 (235)
T 3h7t_A          179 TYIGYGD-AGDPAVQNGT-LVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISG  230 (235)
T ss_dssp             BBCCTTC-TTCEEEETTE-EEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTT
T ss_pred             CccccCC-CCCceeeCCe-EEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhC
Confidence            3467663 4444556432 12234556778876677889999999999988753

>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0

Probab=83.48  E-value=0.31  Score=32.62  Aligned_cols=51  Identities=12%  Similarity=0.083  Sum_probs=33.7

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .-.|.|. .++.-.|.+. =-.++..+.+|....+..|++++.|.+||.++++
T Consensus       176 ~~~C~GD-sGgPl~~~~~-l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i~  226 (228)
T 3h7o_A          176 VSLESGD-AGDPTVQQDT-LVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIK  226 (228)
T ss_dssp             CCCCGGG-TTCEEEETTE-EEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHHT
T ss_pred             CcCCCCC-CCCcceecCe-EEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHhh
Confidence            3457663 4444556433 1224455677877667788999999999998775

>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}

Probab=83.43  E-value=0.67  Score=30.77  Aligned_cols=22  Identities=27%  Similarity=0.480  Sum_probs=16.0

Q ss_pred             cCCCcceEEEeeCCcccCceeEEEEeCC
Q psy1243          57 QGDSGGPIVCDIQGCDKGASLGTDRLSR   84 (121)
Q Consensus        57 ~gDsGgPLv~~~~~~~~~~~~g~~~v~~   84 (121)
                      .|||||||++.  +    ...|+.+++.
T Consensus       140 ~GDSGgpl~~~--~----~~vGi~s~~~  161 (188)
T 2oua_A          140 PGDSGGSFISG--T----QAQGVTSGGS  161 (188)
T ss_dssp             TTCTTCEEEET--T----EEEEEEEEEE
T ss_pred             CCCccceEEEC--C----EEEEEEeccC
Confidence            69999999962  2    3578877653

>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...

Probab=83.36  E-value=0.2  Score=29.54  Aligned_cols=50  Identities=18%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             eEEEeecCCCCCCccCCCcc----eEEEeeCCccc-CceeEEEEeCCCcceeeeccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGG----PIVCDIQGCDK-GASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg----PLv~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      -.|.|. .++.-.|.++ |.    .++..+.+|.. ..+.+|++|+.|.+||.+++.
T Consensus        41 ~~C~GD-SGGPL~~~~~-~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~~   95 (97)
T 1yph_E           41 SSCMGD-SGGPLVCKKN-GAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA   95 (97)
T ss_dssp             BCCTTC-TTCEEEEEET-TEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHHH
T ss_pred             CCCcCC-CCCcEEEEeC-CeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHHc
Confidence            457662 4444456542 22    23445566653 457777999999999988764

>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...

Probab=83.20  E-value=0.22  Score=33.96  Aligned_cols=52  Identities=23%  Similarity=0.220  Sum_probs=35.3

Q ss_pred             eEEEeecCCCCCCccCCCcc-----eEEEeeCCcccC-ceeEEEEeCCCcceeeecccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGG-----PIVCDIQGCDKG-ASLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg-----PLv~~~~~~~~~-~~~g~~~v~~~~~wi~~v~~~   95 (121)
                      -.|.|. .++.-.|....++     .++..+.+|... .+..|++++.|.+||.++++-
T Consensus       199 ~~C~GD-sGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~~  256 (259)
T 3rm2_H          199 DACEGD-SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ  256 (259)
T ss_dssp             BCCTTC-TTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHHH
T ss_pred             cccCCC-CCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHH
Confidence            568773 4555567654222     344566788764 456679999999999988753

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=83.01  E-value=0.24  Score=35.51  Aligned_cols=52  Identities=19%  Similarity=0.148  Sum_probs=35.2

Q ss_pred             eEEEeecCCCCCCccCCCcc------eEEEeeCCcccCceeEEEEeCCCcceeeeccccce
Q psy1243          43 MFCAGSFQGGADSCQGDSGG------PIVCDIQGCDKGASLGTDRLSRACYVLSKMIRFYA   97 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg------PLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~~~~   97 (121)
                      -.|-|. .++.-.|....++      .++..+.+|..  +..|++|+.|.+||.+++.-..
T Consensus       271 ~~C~GD-SGGPL~~~~~~~~~~~~l~GIvS~g~~C~~--~~vyt~V~~y~~WI~~~~~~~~  328 (333)
T 1elv_A          271 DSCKGD-SGGAFAVQDPNDKTKFYAAGLVSWGPQCGT--YGLYTRVKNYVDWIMKTMQENS  328 (333)
T ss_dssp             BCCTTC-TTCEEEEECSSCTTCEEEEEEEEECSSTTS--EEEEEEGGGGHHHHHHHHHHTC
T ss_pred             CcCcCc-CCCceEEEECCCCcEEEEEEEEeeCCCCCC--CcEEeEHHHHHHHHHHHHhccC
Confidence            457773 4555566543222      45566788985  5667999999999999886443

>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*

Probab=82.30  E-value=0.51  Score=31.71  Aligned_cols=53  Identities=19%  Similarity=0.262  Sum_probs=34.7

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCC-cccC-ceeEEEEeCCCcceeeeccccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQG-CDKG-ASLGTDRLSRACYVLSKMIRFY   96 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~-~~~~-~~~g~~~v~~~~~wi~~v~~~~   96 (121)
                      .-.|.|. .++.-.|.+.- -.++..+.+ |... .+..|++++.|.+||.+++.-.
T Consensus       173 ~~~C~GD-SGgPl~~~~~l-~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~  227 (234)
T 3s9c_A          173 RDTCHGD-SGGPLICNGEM-HGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN  227 (234)
T ss_dssp             CBCCTTC-TTCEEEETTEE-EEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred             CccCCCC-CCCeEEEeCCc-EEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence            3457763 45555665442 234455544 8764 4677799999999999988543

>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*

Probab=81.96  E-value=0.24  Score=33.44  Aligned_cols=52  Identities=17%  Similarity=0.136  Sum_probs=33.8

Q ss_pred             CeEEEeecCCCCCCccCCCcc-----eEEEee-CCcccC-ceeEEEEeCCCcceeeeccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGG-----PIVCDI-QGCDKG-ASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGg-----PLv~~~-~~~~~~-~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .-.|.|. .++.-.|.+..++     .++..+ .+|... .+..|++++.|.+||.++++
T Consensus       182 ~~~C~GD-sGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~  240 (242)
T 3tvj_B          182 KDSCRGD-SGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS  240 (242)
T ss_dssp             SBCCTTC-TTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CccccCC-CCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence            3557763 4555566543333     244555 788764 45667999999999998764

>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B

Probab=81.44  E-value=0.65  Score=31.19  Aligned_cols=50  Identities=20%  Similarity=0.247  Sum_probs=32.9

Q ss_pred             eEEEeecCCCCCCccCCCcc----eEEEeeCCcccC-ceeEEEEeCCCcceeeeccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGG----PIVCDIQGCDKG-ASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGg----PLv~~~~~~~~~-~~~g~~~v~~~~~wi~~v~~   94 (121)
                      -.|.|. .++.-.|..+ |.    .++..+.+|... .+..|++++.|.+||+++++
T Consensus       181 ~~C~GD-sGgPl~~~~~-~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~i~  235 (235)
T 4dgj_A          181 DSCQGD-SGGPLMCQEN-NRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSFLH  235 (235)
T ss_dssp             BCCTTC-TTCEEEEEET-TEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTTCC
T ss_pred             ccCCCC-CCCeEEEEEC-CcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHHhC
Confidence            457763 4445566533 22    344566788754 46677999999999998763

>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*

Probab=81.05  E-value=0.67  Score=31.04  Aligned_cols=51  Identities=16%  Similarity=0.104  Sum_probs=32.2

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCccc-CceeEEEEeCCCcceeeecc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDK-GASLGTDRLSRACYVLSKMI   93 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~-~~~~g~~~v~~~~~wi~~v~   93 (121)
                      .-.|.|. .++.-.|....=-.++..+.+|.. ..+..|++++.|.+||.+++
T Consensus       173 ~~~C~GD-SGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i  224 (224)
T 1pq7_A          173 KDSCQGD-SGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA  224 (224)
T ss_dssp             CBCCTTC-TTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHHHC
T ss_pred             CCCCcCC-CCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHhhC
Confidence            3567773 444445631111234466678986 45667799999999998754

>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A

Probab=80.66  E-value=0.57  Score=31.29  Aligned_cols=48  Identities=17%  Similarity=0.092  Sum_probs=31.4

Q ss_pred             EEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          44 FCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        44 ~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .|.| ..++.-.|.+ .--.++..+.+|... +..|++++.|.+||.++++
T Consensus       179 ~C~g-DsGgPl~~~~-~l~Gi~S~g~~c~~~-p~vyt~V~~~~~WI~~~i~  226 (227)
T 3fzz_A          179 SFEE-DSGGPLVCKR-AAAGIVSYGQTDGSA-PQVFTRVLSFVSWIKKTMK  226 (227)
T ss_dssp             CTTT-TTTCEEEETT-EEEEEEEECCTTCSS-SEEEEEGGGTHHHHHHHHT
T ss_pred             cccc-CCccceEEec-CCcEEEEECCCCCCC-CeEEEEhHHhHHHHHHHHh
Confidence            4555 2344445543 223466777777654 6777999999999988764

>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}

Probab=80.53  E-value=0.66  Score=32.15  Aligned_cols=65  Identities=17%  Similarity=0.142  Sum_probs=39.9

Q ss_pred             ccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcc----eEEEeeCCcccC-ceeEEEEeCCCcceeeeccc
Q psy1243          23 TLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGG----PIVCDIQGCDKG-ASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        23 ~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGg----PLv~~~~~~~~~-~~~g~~~v~~~~~wi~~v~~   94 (121)
                      +.+...|...  .    ...-.|.|. .++.-.|....|.    .++..+.+|... .+..|++|+.|.+||.++++
T Consensus       208 ~~~~~~Ca~~--~----~~~~~C~GD-SGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~  277 (278)
T 2olg_A          208 VRSSQLCAGG--E----KAKDSCGGD-SGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGNIR  277 (278)
T ss_dssp             CCTTEEEECC--T----TCTTCCCCC-TTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHHTTCC
T ss_pred             CCCceEeeec--C----CCCeeCCCc-cCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHHHhhC
Confidence            3455567641  1    123468773 5555566522232    344566788764 46667999999999988764

>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2

Probab=80.32  E-value=0.7  Score=31.24  Aligned_cols=50  Identities=22%  Similarity=0.262  Sum_probs=32.8

Q ss_pred             CeEEEeecCCCCCCccCCCcce----EEEeeCCccc-CceeEEEEeCCCcceeeecc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGP----IVCDIQGCDK-GASLGTDRLSRACYVLSKMI   93 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgP----Lv~~~~~~~~-~~~~g~~~v~~~~~wi~~v~   93 (121)
                      .-.|.|. .++.-.|.++ |..    ++..+.+|.. ..+..|++++.|.+||.+++
T Consensus       182 ~~~C~GD-SGgPL~~~~~-~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~  236 (237)
T 2f91_A          182 KDSCQGD-SGGPLAASDT-GSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKANA  236 (237)
T ss_dssp             CBCCTTC-TTCEEEECTT-SSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred             CCCCCCc-CCCCeEEecC-CCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHhc
Confidence            3467773 4445566532 333    3455678876 45677799999999998765

>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A

Probab=80.13  E-value=0.58  Score=31.40  Aligned_cols=51  Identities=22%  Similarity=0.313  Sum_probs=33.8

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCccc-CceeEEEEeCCCcceeeeccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDK-GASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      .-.|.|. .++.-.|.+. =-.++..+.+|.. ..+..|++++.|.+||.+++.
T Consensus       169 ~~~C~GD-SGgPL~~~~~-l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~  220 (222)
T 1hj8_A          169 KDSCQGD-SGGPVVCNGE-LQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             CBCCTTC-TTCEEEETTE-EEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CccCCCC-cccceEECCE-EEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence            3467763 4555566432 1234466678875 457777999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	121
g2pka.1	232	b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [T	3e-12
d1ao5a_	237	b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus)	1e-09
d1npma_	225	b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [Tax	3e-09
d1tona_	235	b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 1	3e-09
d1xx9a_	237	b.47.1.2 (A:) Coagulation factor XI {Human (Homo s	4e-09
d1rjxb_	247	b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Hum	8e-09
d1z8ga1	255	b.47.1.2 (A:163-417) Hepsin, catalytic domain {Hum	1e-08
d1hj8a_	222	b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon	3e-08
d1j16a_	223	b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicu	6e-08
g1gj7.1	256	b.47.1.2 (A:,B:) Urokinase-type plasminogen activa	7e-08
d1pytd_	251	b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Co	1e-07
d1orfa_	232	b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [Ta	1e-07
d1sgfa_	228	b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus	2e-07
d1mzaa_	240	b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [Ta	4e-07
d1lo6a_	221	b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [	6e-07
d2f91a1	237	b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed c	1e-06
d1fxya_	228	b.47.1.2 (A:) Coagulation factor Xa-trypsin chimer	2e-06
g1gg6.1	238	b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(oge	2e-06
d1rfna_	235	b.47.1.2 (A:) Coagulation factor IXa, protease dom	5e-06
d1gvkb_	240	b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9	5e-06
d1hj9a_	223	b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [Tax	7e-06
g1rtf.1	260	b.47.1.2 (A:,B:) Two-chain tissue plasminogen acti	1e-05
d1rrka1	287	b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens	1e-05
g1fiw.1	274	b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries)	2e-05
d1arba_	263	b.47.1.1 (A:) Achromobacter protease {Achromobacte	2e-05
d1gdna_	224	b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxyspo	3e-05
d1ekbb_	235	b.47.1.2 (B:) Enteropeptidase (enterokinase light	3e-05
d2fpza1	243	b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sap	5e-05
d1gvza_	237	b.47.1.2 (A:) Prostate specific antigen (PSA kalli	1e-04
d1hpga_	187	b.47.1.1 (A:) Glutamic acid-specific protease {Str	5e-04
d1brup_	241	b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9	0.002
d1si5h_	234	b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human	0.004

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.0 bits (123), Expect = 1e-09
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 16  LKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L+   +  L  E+C K   Y  ++ D M CAG   GG D+C+ DSGGP++CD
Sbjct: 147 LQCVFITLLPNENCAK--VYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICD 196

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]} Length = 225

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.8 bits (120), Expect = 3e-09
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 5   IASSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPI 64
           + S   +   TL  A V   SQ  C +   Y  +I + M CAGS   GAD+CQGDSGGP+
Sbjct: 128 VTSPQENFPNTLNCAEVKIYSQNKCERA--YPGKITEGMVCAGS-SNGADTCQGDSGGPL 184

Query: 65  VCD 67
           VCD
Sbjct: 185 VCD 187

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 50.4 bits (119), Expect = 3e-09
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 20  RVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            +  LS E C +   Y   + D M CAG  +GG D+C GDSGGP++CD
Sbjct: 149 NIHLLSNEKCIE--TYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICD 194

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (119), Expect = 4e-09
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           TL+ A++  ++ E C+K    G +I   M CAG  +GG D+C+GDSGGP+ C    
Sbjct: 144 TLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNE 198

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 247

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 8e-09
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 19  ARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           A++  +  + C + +    R++ +  CAG   GG DSCQGDSGGP+VC  + 
Sbjct: 156 AQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD 207

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 255

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (115), Expect = 1e-08
 Identities = 29/60 (48%), Positives = 36/60 (60%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKG 74
            L+ ARV  +S + C   D YG +IK  MFCAG  +GG D+CQGDSGGP VC+       
Sbjct: 146 VLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTP 205

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]} Length = 222

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

 Score = 47.7 bits (112), Expect = 3e-08
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 16  LKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L+   +  LS   C     Y   I ++MFCAG  +GG DSCQGDSGGP+VC+
Sbjct: 134 LQCLNIPILSYSDCNNS--YPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN 183

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.9 bits (110), Expect = 6e-08
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            L+      L Q  C    +    I D+M C G  +GG D+CQGDSGGP+VC+
Sbjct: 134 LLQCLDAPLLPQADCEA--SSSFIITDNMVCVGFLEGGKDACQGDSGGPVVCN 184

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 251

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (107), Expect = 1e-07
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
            ++   A  L+      +   +C + D +GT +K++M CAG   G   +C GDSGGP+ C
Sbjct: 148 YTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAG-GDGVISACNGDSGGPLNC 206

Query: 67  DIQG 70
              G
Sbjct: 207 QADG 210

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (107), Expect = 1e-07
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 16  LKAARVGTLSQESCRKEDAYG--TRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           L+   +  + ++ C   + Y     I  +M CAGS +GG DSC GDSG P++C+
Sbjct: 138 LREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE 191

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (105), Expect = 2e-07
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 17  KAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           +   +  L  E C    A+  ++ D+M CAG   GG+ +C+ DSGGP++CD
Sbjct: 139 QCVNLKLLPNEDCD--KAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICD 187

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (104), Expect = 4e-07
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRI--KDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           TL+   V  LS++ C  +  Y         M CAG  +G  DSC+GD+GGP++C 
Sbjct: 143 TLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK 197

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 6e-07
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           T++ A +  +S+E C    AY  +I  +M CAG  + G DSCQGDSGGP+VC
Sbjct: 133 TIQCAYIHLVSREECEH--AYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVC 182

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

 Score = 43.5 bits (101), Expect = 1e-06
 Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVC 66
           S   +    L+   V  +S E CR +      I DSM CAG  +GG DSCQGDSGGP+  
Sbjct: 137 SEGGNTPDVLQKVTVPLVSDEDCRADY-GADEILDSMICAGVPEGGKDSCQGDSGGPLAA 195

Query: 67  DIQG 70
              G
Sbjct: 196 SDTG 199

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence} Length = 228

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

 Score = 42.8 bits (99), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 8   SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           S A     L+      LSQ  C     Y  +I  +MFC G  +GG DSCQGDSGGP+VC+
Sbjct: 131 SGADYPDELQCLDAPVLSQAKCEAS--YPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCN 188

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (96), Expect = 5e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
            L+  RV  + + +C    +    I ++MFCAG  +GG DSCQGDSGGP V +++G
Sbjct: 142 VLQYLRVPLVDRATCL--RSTKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG 195

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 240

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 41.7 bits (96), Expect = 5e-06
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
           TL+ A + T+    C     +G+ +K+SM CAG   G    CQGDSGGP+ C + G
Sbjct: 144 TLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG 198

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]} Length = 223

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.2 bits (95), Expect = 7e-06
 Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            LK  +   LS  SC+   AY  +I  +MFCA   +G  DSCQGDSGGP+VC 
Sbjct: 134 VLKCLKAPILSDSSCKS--AYPGQITSNMFCAYGLEGKGDSCQGDSGGPVVCS 184

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 287

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (93), Expect = 1e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 31  KEDAYGTRIKDSMFCAGSFQG--GADSCQGDSGGPIVCDIQG 70
           K       +     C G        ++C+GDSGGP++   + 
Sbjct: 191 KVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRS 232

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]} Length = 263

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

 Score = 40.0 bits (92), Expect = 2e-05
 Identities = 9/42 (21%), Positives = 12/42 (28%)

Query: 26  QESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
             S     A+G     +         G  +  G SG PI   
Sbjct: 160 STSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSP 201

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Length = 224

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

 Score = 39.3 bits (90), Expect = 3e-05
 Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
            L    V  +S+ +CR +    + I + MFCAG   GG DSCQGDSGGPIV  
Sbjct: 136 NLLKVTVPIVSRATCRAQY-GTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDS 187

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]} Length = 235

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.3 bits (90), Expect = 3e-05
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
            L+ A V  LS E C+++      I ++M CAG   GG DSCQGDSGGP++C    
Sbjct: 143 VLQEADVPLLSNEKCQQQM-PEYNITENMVCAGYEAGGVDSCQGDSGGPLMCQENN 197

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 5e-05
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 7   SSSASNALTLKAARVGTLSQESCRKEDAYGTR-------IKDSMFCAGSFQGGADSCQGD 59
                    LK  +V  +    C  +   G         ++D M CAG+     DSCQGD
Sbjct: 136 DERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGN--TRRDSCQGD 193

Query: 60  SGGPIVCDIQG 70
           SGGP+VC + G
Sbjct: 194 SGGPLVCKVNG 204

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]} Length = 237

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 37.4 bits (85), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCD 67
           TL+   +   S E C +  AY  ++ + + CA         C GDSGG ++CD
Sbjct: 146 TLQCVELRLQSNEKCAR--AYPEKMTEFVLCATHRDDSGSICLGDSGGALICD 196

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]} Length = 187

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

 Score = 35.7 bits (81), Expect = 5e-04
 Identities = 7/27 (25%), Positives = 8/27 (29%)

Query: 41  DSMFCAGSFQGGADSCQGDSGGPIVCD 67
                    +  A S  GDSGG     
Sbjct: 124 GDGPVYNMVRTTACSAGGDSGGAHFAG 150

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]} Length = 241

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 34.0 bits (76), Expect = 0.002
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 15  TLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGC 71
            L+  ++  +   +C K   +G+ +K +M CAG   G   SC GDSGGP+ C     
Sbjct: 144 ILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGANG 199

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]} Length = 234

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (74), Expect = 0.004
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 25  SQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQG 70
             E C +       + +S  CAG+ + G+  C+GD GGP+VC+   
Sbjct: 144 GNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHK 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1z8ga1	255	Hepsin, catalytic domain {Human (Homo sapiens) [Ta	99.48
d1eaxa_	241	Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 960	99.47
d1hj8a_	222	Trypsin(ogen) {North atlantic salmon (Salmo salar)	99.47
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	99.46
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1npma_	225	Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}	99.44
d1xx9a_	237	Coagulation factor XI {Human (Homo sapiens) [TaxId	99.43
d1orfa_	232	Granzyme A {Human (Homo sapiens) [TaxId: 9606]}	99.43
g1gg6.1	238	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.42
d1pytd_	251	(alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus)	99.41
g2pka.1	232	Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}	99.41
d2qy0b1	240	Complement C1R protease, catalytic domain {Human (	99.41
d1fxya_	228	Coagulation factor Xa-trypsin chimera {Synthetic,	99.41
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	99.4
d1rjxb_	247	Plasmin(ogen), catalytic domain {Human (Homo sapie	99.4
d1mzaa_	240	Granzyme K {Human (Homo sapiens) [TaxId: 9606]}	99.38
d2f91a1	237	Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus	99.38
d1brup_	241	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.37
d1j16a_	223	Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 101	99.36
d1tona_	235	Tonin {Rat (Rattus rattus) [TaxId: 10117]}	99.36
d1gdna_	224	Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5	99.35
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	99.34
d1q3xa1	242	Mannan-binding lectin serine protease 2 (MASP-2),	99.34
d1hj9a_	223	Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}	99.34
d2p3ub1	233	Coagulation factor Xa, protease domain {Human (Hom	99.34
d1gvkb_	240	Elastase {Pig (Sus scrofa) [TaxId: 9823]}	99.33
d1fona_	232	Procarboxypeptidase A-S6 subunit III (zymogen E) {	99.31
d1nn6a_	224	Chymase (mast cell protease I) {Human (Homo sapien	99.3
d1ekbb_	235	Enteropeptidase (enterokinase light chain) {Cow (B	99.29
d1rrka1	287	Factor B {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	99.29
g1h8d.1	289	Thrombin {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1lo6a_	221	Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}	99.27
d1fi8a_	227	Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]	99.27
d3rp2a_	224	Chymase II (mast cell proteinase II) {Rat (Rattus	99.26
d1sgfa_	228	7S NGF protease subunits {Mouse (Mus musculus) [Ta	99.26
d1elva1	259	Complement C1S protease, catalytic domain {Human (	99.25
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	99.24
d1ao5a_	237	Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]	99.22
d1os8a_	223	Trypsin {Streptomyces griseus, strain k1 [TaxId: 1	99.22
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	99.2
d1azza_	226	Crab collagenase {Atlantic sand fiddler crab (Uca	99.17
d1elta_	236	Elastase {Salmon (Salmo salar) [TaxId: 8030]}	99.15
d1autc_	240	Activated protein c (autoprothrombin IIa) {Human (	99.14
g1fiw.1	274	Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}	99.14
d1m9ua_	241	Elastase {Worm (Eisenia fetida) [TaxId: 6396]}	99.13
d1gvza_	237	Prostate specific antigen (PSA kallikrein) {Horse	99.13
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	99.13
d1op0a_	234	Venom serine protease {Hundred-pace snake (Agkistr	99.09
d1fq3a_	227	Granzyme B {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1bioa_	228	Factor D {Human (Homo sapiens) [TaxId: 9606]}	99.05
d2hlca_	230	HL collagenase {Common cattle grub (Hypoderma line	99.01
d1a7sa_	225	Heparin binding protein, HBP {Human (Homo sapiens)	99.0
d2bz6h1	254	Coagulation factor VIIa {Human (Homo sapiens) [Tax	98.99
d2z7fe1	218	Elastase {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1fuja_	221	Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 96	98.69
d1arba_	263	Achromobacter protease {Achromobacter lyticus, str	98.48
d1p3ca_	215	Glutamyl endopeptidase {Bacillus intermedius [TaxI	97.17
d1hpga_	187	Glutamic acid-specific protease {Streptomyces gris	97.16
d1eq9a_	222	(alpha,gamma)-chymotrypsin(ogen) {Red fire ant (So	88.04
g1gj7.1	256	Urokinase-type plasminogen activator (LMW U-PA), c	87.69
d2sgaa_	181	Protease A {Streptomyces griseus, strain k1 [TaxId	84.67
d2fpza1	243	beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}	83.0
d1si5h_	234	Hepatocyte growth factor, HGF {Human (Homo sapiens	82.87
d1rfna_	235	Coagulation factor IXa, protease domain {Human (Ho	82.64
g1rtf.1	260	Two-chain tissue plasminogen activator (TC)-T-PA {	82.24
d1eufa_	224	Duodenase {Cow (Bos taurus) [TaxId: 9913]}	81.84
d1t32a1	224	Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}	80.95

>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepsin, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.9e-14  Score=95.61  Aligned_cols=98  Identities=36%  Similarity=0.585  Sum_probs=81.4

Q ss_pred             CCCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeC--CcccCceeEEEEeCC
Q psy1243           7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ--GCDKGASLGTDRLSR   84 (121)
Q Consensus         7 ~~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~--~~~~~~~~g~~~v~~   84 (121)
                      ..++..+..|+...+++++++.|+..+.....+.+.++|++...++.+.|.||+||||++.+.  .-..+++.|++|++.
T Consensus       138 ~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~  217 (255)
T d1z8ga1         138 QYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT  217 (255)
T ss_dssp             STTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBS
T ss_pred             cCCCcccceeEEEEEEEeCHHHhhhhhccCccccCcceEEecCCCCcccccCccccceEEecCCCCCCcEEEEEEEEECC
Confidence            345667788999999999999999876666678888998887677788999999999999874  334567999999987


Q ss_pred             Ccc------eeeeccccceecceecc
Q psy1243          85 ACY------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        85 ~~~------wi~~v~~~~~wi~~~~~  104 (121)
                      .|.      +|+++..|.+||...+.
T Consensus       218 ~c~~~~~p~vft~V~~y~~WI~~~i~  243 (255)
T d1z8ga1         218 GCALAQKPGVYTKVSDFREWIFQAIK  243 (255)
T ss_dssp             SSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEHHHhHHHHHHHHH
Confidence            774      79999999999987773

>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Matriptase MTSP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8.4e-14  Score=95.10  Aligned_cols=93  Identities=27%  Similarity=0.502  Sum_probs=77.8

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      ........|+...+++++.+.|+..  +...+..+++|++......+.|.||+||||++.... +++++.||.+++..|.
T Consensus       141 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~c~~~~~~~~~~c~gd~G~pl~~~~~~-g~~~L~Gi~s~~~~c~  217 (241)
T d1eaxa_         141 YGGTGALILQKGEIRVINQTTCENL--LPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEAD-GRIFQAGVVSWGDGCA  217 (241)
T ss_dssp             TTSCBCSBCEEEEEEECCHHHHHHH--STTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTT-SCEEEEEEEEECSSSS
T ss_pred             ccccccccceEEEEEEeCHHHHHHH--hCccccCccceeccCCCCcccccCcccceeEEEcCC-CeEEEEEEEEECCCCC
Confidence            3455667899999999999999984  556678899999876777899999999999987643 4568899999988774


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||.+.+
T Consensus       218 ~~~~p~vft~V~~y~~WI~~~~  239 (241)
T d1eaxa_         218 QRNKPGVYTRLPLFRDWIKENT  239 (241)
T ss_dssp             CTTCCEEEEESGGGHHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHHh
Confidence                  7999999999998765

>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: North atlantic salmon (Salmo salar) [TaxId: 8030]

Probab=99.47  E-value=6.9e-14  Score=94.37  Aligned_cols=89  Identities=37%  Similarity=0.689  Sum_probs=72.7

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      ..+.....|+.+.+.+++.++|+..  +...+.+.+||++...++.+.|.||+||||+++      +.+.||+|++..|.
T Consensus       126 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~C~~~~~~~~~~c~gdsGgPl~~~------~~l~Gi~S~g~~~~  197 (222)
T d1hj8a_         126 SSTADSNKLQCLNIPILSYSDCNNS--YPGMITNAMFCAGYLEGGKDSCQGDSGGPVVCN------GELQGVVSWGYGCA  197 (222)
T ss_dssp             CSSCCTTBCEEEEEEBCCHHHHHHH--STTCCCTTEEEESCTTSSCBCCTTCTTCEEEET------TEEEEEEEECSSSS
T ss_pred             cccccccccEEEEEEEeCHHHHhhh--cccccccceEEEccCCCCcccccCCcccEEEEC------CEEEEEEEEecCCC
Confidence            4456667899999999999999984  556688999999876677889999999999984      45788888886663


Q ss_pred             ------eeeeccccceecceecc
Q psy1243          88 ------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~~  104 (121)
                            .|+++..|.+||...+.
T Consensus       198 ~~~~p~v~t~v~~y~~WI~~~i~  220 (222)
T d1hj8a_         198 EPGNPGVYAKVCIFNDWLTSTMA  220 (222)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHHHH
Confidence                  78899999999876653

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.1e-13  Score=94.20  Aligned_cols=97  Identities=23%  Similarity=0.430  Sum_probs=75.5

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      .....|+.+.+.+++.+.|...+.....+.++++|++......+.|.||+||||+++..+  .+++.|+++++..|.   
T Consensus       130 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~pl~~~~~~--~~~l~Gi~s~g~~c~~~~  207 (234)
T d1si5h_         130 NYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGPLVCEQHK--MRMVLGVIVPGRGCAIPN  207 (234)
T ss_dssp             SCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCEEEEECSS--SEEEEEEECSCSCSSCTT
T ss_pred             cccceeEEEEeeccchhHhhhhhccccccCCccEEEccCCcCCCCCcCccccceEEecCC--eEEEEEEEEeCCCCCCCC
Confidence            456789999999999999998765555678999999876677899999999999997653  457899999887773   


Q ss_pred             ---eeeeccccceecceecccccCC
Q psy1243          88 ---VLSKMIRFYASVGIEATSSCSP  109 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~~~s~~p  109 (121)
                         .|+++..|.+||...+.....|
T Consensus       208 ~p~vyt~i~~~~~WI~~~i~~~~~~  232 (234)
T d1si5h_         208 RPGIFVRVAYYAKWIHKIILTYKVP  232 (234)
T ss_dssp             CCEEEEEGGGGHHHHHHHHSSCCCC
T ss_pred             CCEEEEEHHHHHHHHHHHhhcCCCC
Confidence               8899999999998877644433

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1e-13  Score=93.39  Aligned_cols=86  Identities=19%  Similarity=0.424  Sum_probs=71.4

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      ......|+++.+.+++.++|++.  +...+.++++|+.....+.+.|.||+||||+++      +.+.||++++..|.  
T Consensus       133 ~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~c~~~~~~~~~~c~gdsGgPl~~~------~~l~Gi~S~g~~~~~~  204 (224)
T d1t32a1         133 RRGTDTLREVQLRVQRDRQCLRI--FGSYDPRRQICVGDRRERKAAFKGDSGGPLLCN------NVAHGIVSYGKSSGVP  204 (224)
T ss_dssp             SCCCSBCEEEEEEBCCHHHHHHH--STTCCTTTEEEECCTTSSCBCCTTCTTCEEEET------TEEEEEEEECCTTCCS
T ss_pred             CCCcceeeeeeeeecCHHHHHhh--cCcccccccceeecccccccccccCcCCeEEEc------CEEEEEEEEcCCCCCC
Confidence            34557799999999999999984  556678899999866777889999999999983      47889999886664  


Q ss_pred             --eeeeccccceecceec
Q psy1243          88 --VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 --wi~~v~~~~~wi~~~~  103 (121)
                        .|+++..|.+||...+
T Consensus       205 p~vyt~v~~y~~WI~~~i  222 (224)
T d1t32a1         205 PEVFTRVSSFLPWIRTTM  222 (224)
T ss_dssp             CEEEEEGGGSHHHHHHHH
T ss_pred             CcEEEEHHHhHHHHHHHH
Confidence              8999999999997654

>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Neuropsin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=1.1e-13  Score=93.48  Aligned_cols=87  Identities=39%  Similarity=0.712  Sum_probs=70.6

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~   86 (121)
                      .++..+..|+++.+++++.+.|++.  +...+.++++|++. ..+.+.|.||+||||+++      +++.|+.|++.. |
T Consensus       131 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~C~~~-~~~~~~c~gd~G~pl~~~------~~l~Gi~S~g~~~c  201 (225)
T d1npma_         131 PQENFPNTLNCAEVKIYSQNKCERA--YPGKITEGMVCAGS-SNGADTCQGDSGGPLVCD------GMLQGITSWGSDPC  201 (225)
T ss_dssp             SSCCCCSBCEEEEEEECCHHHHHHH--STTTCCTTEEEEEC-TTCCBCCTTCTTCEEEET------TEEEEEEEECCSSS
T ss_pred             CCCCCCCccEEEEEEEecHHHHhhh--ccCCcCCCEEEecC-CCCCccccCCCCceEEEc------cEEEEEEEECCCCC
Confidence            3456678899999999999999984  55668899999985 556789999999999983      477899887633 4


Q ss_pred             c------eeeeccccceecceec
Q psy1243          87 Y------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~  103 (121)
                      .      +|+++..|.+||...+
T Consensus       202 ~~~~~p~vyt~V~~~~~WI~~~i  224 (225)
T d1npma_         202 GKPEKPGVYTKICRYTTWIKKTM  224 (225)
T ss_dssp             CBTTBCEEEEEHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHh
Confidence            2      7899999999997653

>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.3e-13  Score=93.55  Aligned_cols=92  Identities=28%  Similarity=0.572  Sum_probs=76.6

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      +......|++..+++++.++|+..+ ....+.+.++|++...+..+.|.||+||||++.+++  .+++.|+++++..|. 
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~--~~~l~Gi~s~g~~~~~  214 (237)
T d1xx9a_         138 RDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNE--VWHLVGITSWGEGCAQ  214 (237)
T ss_dssp             TCCCCSBCEEEECCEECHHHHHHHT-TTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEEESSSSC
T ss_pred             cccCCCccEEEEEEEeCHHHHhhhh-cCCCCCCceEEEecCCCCcccccCCccceeEEecCC--EEEEEEEEEeCCCCCC
Confidence            4456678999999999999998853 334578899999876777889999999999998765  467899999987763 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           .|+++..|.+||..++
T Consensus       215 ~~~p~vft~v~~~~~WI~~~~  235 (237)
T d1xx9a_         215 RERPGVYTNVVEYVDWILEKT  235 (237)
T ss_dssp             TTCCEEEECGGGGHHHHHHHH
T ss_pred             CCCCEEEEEhHHhHhHHHHHH
Confidence                 8999999999998765

>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.7e-13  Score=91.75  Aligned_cols=91  Identities=31%  Similarity=0.596  Sum_probs=71.1

Q ss_pred             CCCCccccccceEEEeccChhhhcccccC--CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC
Q psy1243           7 SSSASNALTLKAARVGTLSQESCRKEDAY--GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR   84 (121)
Q Consensus         7 ~~~g~~~~~L~~~~l~~~~~~~C~~~~~~--~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~   84 (121)
                      .+++..++.|+.+.+++++.++|++.+.+  ...+.++++|++......+.|.||+||||+++      +.+.||+|++.
T Consensus       129 ~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~~~~~~~~~c~gdsG~Pl~~~------~~l~GI~S~g~  202 (232)
T d1orfa_         129 HNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCE------GVFRGVTSFGL  202 (232)
T ss_dssp             SSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCTTCTTCEEEET------TEEEEEEEECC
T ss_pred             CCcccCChhheEEEeecCCHHHHhhhhhcccCccccCceEEeccCCCCcccccccCCCeEEEc------CEEEEEEEEEC
Confidence            34566778999999999999999875432  34578899999876677889999999999984      46788888752


Q ss_pred             --Cc------ceeeecc-ccceecceec
Q psy1243          85 --AC------YVLSKMI-RFYASVGIEA  103 (121)
Q Consensus        85 --~~------~wi~~v~-~~~~wi~~~~  103 (121)
                        .|      .+|+++. .|.+||...+
T Consensus       203 ~~~c~~~~~p~vyt~Vs~~y~~WI~~~i  230 (232)
T d1orfa_         203 ENKCGDPRGPGVYILLSKKHLNWIIMTI  230 (232)
T ss_dssp             TTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCcEEEEeeHHHHHHHHHHh
Confidence              23      2788886 6889987654

>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.41  E-value=3.5e-13  Score=92.29  Aligned_cols=93  Identities=26%  Similarity=0.570  Sum_probs=74.8

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC--
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA--   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~--   85 (121)
                      .++.....++...+++++.++|.+.+.........++|++. ....+.|.||+||||++.+++  .+++.|++|++..  
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~c~~~-~~~~~~c~gd~G~Pl~~~~~~--~~~L~Gi~S~~~~~~  225 (251)
T d1pytd_         149 TNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGG-DGVISACNGDSGGPLNCQADG--QWDVRGIVSFGSGLS  225 (251)
T ss_dssp             CCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECC-SCSSCCCCSCTTCEEEEESSS--SEEEEEEEEECCSSC
T ss_pred             CCCcccceeceeeccccCHHHHhhhhcccccccCceEEecc-CCCCccccCCCCCceEEeeCC--EEEEEEEEEECCCCC
Confidence            34556677888899999999999876566667888999984 556789999999999998765  4678999987643  


Q ss_pred             c------ceeeeccccceecceec
Q psy1243          86 C------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~------~wi~~v~~~~~wi~~~~  103 (121)
                      |      ..|+++..|.+||...+
T Consensus       226 c~~~~~p~vyt~v~~y~~WI~~~i  249 (251)
T d1pytd_         226 CNTFKKPTVFTRVSAYIDWINQKL  249 (251)
T ss_dssp             TTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred             CCCCCCCeEEEEHHHhHHHHHHhc
Confidence            3      27899999999998654

>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1R protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-13  Score=92.73  Aligned_cols=93  Identities=24%  Similarity=0.349  Sum_probs=78.0

Q ss_pred             ccccccceEEEeccChhhhcccccC---CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAY---GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~---~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      ..+..++...+.+++.+.|++.+..   ...+.+.++|++......+.|.||||+||++.+.+...+++.|+++++..|.
T Consensus       139 ~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gdsG~pl~~~~~~~~~~~l~Gi~S~g~~c~  218 (240)
T d2qy0b1         139 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS  218 (240)
T ss_dssp             SCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSS
T ss_pred             cccccceEEEEEEcCHHHHHHHhhccccCCceecceEEeccCCccceeeccccccceEEEeCCCCeEEEEEEEEECCCCC
Confidence            4557788999999999999986532   2346789999987677788999999999999988777788999999987774


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          +|+++..|.+||..++
T Consensus       219 ~~p~vft~v~~~~~WI~~~i  238 (240)
T d2qy0b1         219 RGYGFYTKVLNYVDWIKKEM  238 (240)
T ss_dssp             SSCEEEEEGGGGHHHHHHHT
T ss_pred             CCCeEEEEHHHHHHHHHHHh
Confidence                8999999999997654

>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa-trypsin chimera
species: Synthetic, based on Homo sapiens sequence

Probab=99.41  E-value=2.9e-13  Score=91.44  Aligned_cols=87  Identities=36%  Similarity=0.680  Sum_probs=71.8

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      ...+..|+++.+.+++.+.|++.  +...+.+.++|++......+.|.||+|+||+++      +++.||++++..|.  
T Consensus       133 ~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~c~~~~~~~~~~~~gd~G~Pl~~~------~~l~Gi~s~g~~~~~~  204 (228)
T d1fxya_         133 ADYPDELQCLDAPVLSQAKCEAS--YPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCN------GQLQGVVSWGDGCAQK  204 (228)
T ss_dssp             CCCCSSCEEEEEEBCCHHHHHHH--STTTCCTTEEEESCTTCSCBCCTTCTTCEEEET------TEEEEEEEECSSSSBT
T ss_pred             CCCCchhEEEEEEEeCHHHHhhh--cCCcccceeeEeecCCCCcccccCccCccEEEe------CEEEEEEEECCCCCCC
Confidence            34567899999999999999984  556678899999876777899999999999984      46788888887763  


Q ss_pred             ----eeeeccccceecceecc
Q psy1243          88 ----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~~  104 (121)
                          +|+++..|.+||...+.
T Consensus       205 ~~p~vft~v~~~~~WI~~~i~  225 (228)
T d1fxya_         205 NKPGVYTKVYNYVKWIKNTIA  225 (228)
T ss_dssp             TBCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCEEEEEHHHHHHHHHHHHH
Confidence                78999999999976653

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.4e-13  Score=91.08  Aligned_cols=92  Identities=33%  Similarity=0.600  Sum_probs=75.4

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      +......|+++.+++++...|...  +...+.+..+|++......+.|.||+||||++...+  .+++.|+++++..|. 
T Consensus       136 ~~~~~~~l~~~~~~~~~~~~c~~~--~~~~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~--~~~l~Gi~s~g~~~~~  211 (235)
T d1rfna_         136 KGRSALVLQYLRVPLVDRATCLRS--TKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEG--TSFLTGIISWGEECAM  211 (235)
T ss_dssp             TSCBCSBCEEEEEEBCCHHHHHHH--CSSCCCTTEEEESCSSCSCBCCTTCTTCEEEEESSS--CEEEEEEEEEESSSSC
T ss_pred             cccccCcceEEEEecccccccccc--cCceecCCeeEeecCCCCccccCCCCCceeEEecCC--eEEEEEEEEeCCCCCC
Confidence            345567799999999999999884  445567778888766777899999999999998765  357899999887764 


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       212 ~~~p~vyt~v~~~~~WI~~~~~  233 (235)
T d1rfna_         212 KGKYGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             TTCCEEEEEGGGTHHHHHHHHC
T ss_pred             CCCCEEEEEHHHHHHHHHHHhc
Confidence                 88999999999987764

>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Plasmin(ogen), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.8e-13  Score=91.54  Aligned_cols=93  Identities=30%  Similarity=0.533  Sum_probs=76.6

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++.....++.+.+.+++.+.|...+.......+.++|++......+.|.||+|+||++...+  .+++.|+++++..|. 
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~--~~~l~Gi~S~~~~c~~  223 (247)
T d1rjxb_         146 GTFGAGLLMEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKD--KYILQGVTSWGLGCAR  223 (247)
T ss_dssp             --CCCSBCEEEEEEEECHHHHTSTTTTTTCSCTTEEEESCSSSCCCBCCSCTTCEEEEECSS--SEEEEEEECTTSCCBB
T ss_pred             CCCCCCcceEEEEEEEchHHhhhhhccCcccccceeEEeccCCCcccccCCccceEEEeeCC--EEEEEEEEEeCCCCCC
Confidence            34556788999999999999988665566678899999876777889999999999998875  467899999987773 


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           +|+++..|.+||...+
T Consensus       224 ~~~p~v~t~v~~~~~WI~~~i  244 (247)
T d1rjxb_         224 PNKPGVYVRVSRFVTWIEGVM  244 (247)
T ss_dssp             TTBCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCEEEEEHHHHHHHHHHHH
Confidence                 7999999999997543

>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme K
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.1e-13  Score=90.05  Aligned_cols=90  Identities=28%  Similarity=0.552  Sum_probs=72.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCC--CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYG--TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~--~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      .+..+..|+...+.++..++|+..+.+.  ....+.++|++...+..+.|.|||||||+++      +.+.|+++++..|
T Consensus       137 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~c~~~~~~~~~~C~gDsGgPl~~~------~~l~Gi~S~g~~c  210 (240)
T d1mzaa_         137 SLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLICK------GVFHAIVSGGHEC  210 (240)
T ss_dssp             CSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEET------TEEEEEECSSCCS
T ss_pred             cCcCCcccEEEEEEEecHHHhhhhhhccCCcccccceEEeccCCCCccCccCCCCCeEEEC------CEEEEEEEeCCCC
Confidence            4556678999999999999999854332  3467889999877777889999999999973      4678998888766


Q ss_pred             c------eeeecc-ccceecceecc
Q psy1243          87 Y------VLSKMI-RFYASVGIEAT  104 (121)
Q Consensus        87 ~------wi~~v~-~~~~wi~~~~~  104 (121)
                      .      +|+++. .|.+||..++.
T Consensus       211 ~~~~~p~vftrvs~~y~~WI~~~i~  235 (240)
T d1mzaa_         211 GVATKPGIYTLLTKKYQTWIKSNLV  235 (240)
T ss_dssp             SCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred             CCCCCCeEEEEEHHHHHHHHHHHcc
Confidence            3      788986 58899987764

>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]

Probab=99.38  E-value=5.3e-13  Score=90.64  Aligned_cols=92  Identities=30%  Similarity=0.493  Sum_probs=75.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..++.|+++.+.+++.+.|+..+. ...+.+.++|........+.|.||+||||++.+.  ..+++.|+.|++..|.
T Consensus       138 ~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~~~c~~~~~~~~~~~~gdsG~Pl~~~~~--~~~~L~Gi~S~g~~c~  214 (237)
T d2f91a1         138 EGGNTPDVLQKVTVPLVSDEDCRADYG-ADEILDSMICAGVPEGGKDSCQGDSGGPLAASDT--GSTYLAGIVSWGYGCA  214 (237)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHHHC-TTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTT--SSCEEEEEEEEESSSS
T ss_pred             CCCcCCchheEEEEEEeCHHHHhhhcc-CCcccCceeEeecCCCccccccCCCCCeEEEecC--CeEEEEEEEEeCCCCC
Confidence            455667889999999999999998532 3457788999987677788999999999999764  4568999999887663


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            .|+++..|.+||..+
T Consensus       215 ~~~~p~v~t~v~~y~~WI~~n  235 (237)
T d2f91a1         215 RPGYPGVYTEVSYHVDWIKAN  235 (237)
T ss_dssp             CTTCCEEEEEGGGSHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHh
Confidence                  799999999999754

>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.37  E-value=8.7e-13  Score=89.21  Aligned_cols=93  Identities=23%  Similarity=0.462  Sum_probs=73.1

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc--
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC--   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~--   86 (121)
                      +...++.|+.+.+++++.++|++.......+...++|++. ....+.|.||+||||++.... +.+++.|++|++..+  
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~~~~C~gdsGgPl~~~~~~-~~~~L~Gi~S~g~~~~c  215 (241)
T d1brup_         138 NGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGG-DGIISSCNGDSGGPLNCQGAN-GQWQVHGIVSFGSSLGC  215 (241)
T ss_dssp             TSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECC-SSSSBCCTTCTTCEEEEECTT-SCEEEEEEEEECBTTBS
T ss_pred             CCcCCCcceEEEEEEeCHHHhCccccccccccccceeecC-CCCccccCCCcccceEEEcCC-CCEEEEEEEEECCCCCC
Confidence            3445678999999999999999864444556777888874 667789999999999987554 457899999987543  


Q ss_pred             ------ceeeeccccceecceec
Q psy1243          87 ------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~~~  103 (121)
                            ..|+++..|.+||...+
T Consensus       216 ~~~~~p~vyt~v~~~~~WI~~~i  238 (241)
T d1brup_         216 NYYHKPSVFTRVSNYIDWINSVI  238 (241)
T ss_dssp             SCTTCCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHH
Confidence                  27999999999997544

>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=1.2e-12  Score=88.22  Aligned_cols=85  Identities=32%  Similarity=0.602  Sum_probs=68.7

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      ..+..|+...+.+++.+.|+.  .+...+.++++|++...++.+.|.||+|+||+++      +.+.|+++++..|.   
T Consensus       130 ~~~~~l~~~~~~~~~~~~C~~--~~~~~~~~~~~C~~~~~~~~~~c~gd~g~pl~~~------~~L~Gi~s~~~~~~~~~  201 (223)
T d1j16a_         130 NEPDLLQCLDAPLLPQADCEA--SSSFIITDNMVCVGFLEGGKDACQGDSGGPVVCN------GELQGIVSWGYGCALPD  201 (223)
T ss_dssp             CCCSBCEEEEEEEECHHHHHS--SSSCCCCTTEEEESCTTCSCBCCTTCTTCEEEET------TEEEEEEEECSSSSCTT
T ss_pred             cCcceeeEEEEEEEEhhHhhc--cccceeCCCceEEecCCCCCcccCCccCCcEEEe------eEEEEEEEEccCCCCCC
Confidence            455789999999999999998  3455678899999876777889999999999984      35788888776653   


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         .|+++..|.+||...+
T Consensus       202 ~p~vft~v~~~~~WI~~~i  220 (223)
T d1j16a_         202 NPGVYTKVCNYVDWIQDTI  220 (223)
T ss_dssp             CCEEEEEGGGGHHHHHHHH
T ss_pred             CCEEEEEhHHhHHHHHHHH
Confidence               7888888888887554

>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Tonin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.36  E-value=8.6e-13  Score=89.25  Aligned_cols=87  Identities=33%  Similarity=0.709  Sum_probs=68.4

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Cc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-AC-   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~-   86 (121)
                      ++.....|+...+++++.++|+..  +.....+.++|++...+..+.|.||+||||+++      +++.|++|++. .| 
T Consensus       138 ~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~c~~~~~~~~~~c~gdsG~Pl~~~------~~l~Gi~S~g~~~c~  209 (235)
T d1tona_         138 EMVVSHDLQCVNIHLLSNEKCIET--YKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICD------GVLQGITSGGATPCA  209 (235)
T ss_dssp             SCCCCSBCEEEEEEEECGGGCGGG--GSTTGGGGEEEEECTTCSCBCCTTCTTCEEEET------TEEEEEECCCCSSCS
T ss_pred             cccccccceeeeeeeeCHHHHHHH--hCCCCCCCceEeCcCCCCccccCCCcCCeEEEc------CEEEEEEEeCCCCCC
Confidence            344556899999999999999984  455567889999876777889999999999984      47788877753 23 


Q ss_pred             -----ceeeeccccceecceec
Q psy1243          87 -----YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 -----~wi~~v~~~~~wi~~~~  103 (121)
                           ..|+++..|.+||...+
T Consensus       210 ~~~~p~vyt~v~~y~~WI~~~i  231 (235)
T d1tona_         210 KPKTPAIYAKLIKFTSWIKKVM  231 (235)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCeEEEEHHHHHHHHHHHH
Confidence                 27888888888887654

>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Mold (Fusarium oxysporum) [TaxId: 5507]

Probab=99.35  E-value=1.2e-12  Score=88.09  Aligned_cols=85  Identities=34%  Similarity=0.610  Sum_probs=69.5

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      ..+..|+...+++++.++|+..+. ...+.+.++|++....+.+.|.+|+||||++     ..+++.||.|++..|.   
T Consensus       132 ~~~~~l~~~~v~~i~~~~C~~~~~-~~~~~~~~~~~~~~~~~~~~c~~dsG~pl~~-----~~~~l~GI~S~g~~c~~~~  205 (224)
T d1gdna_         132 STPVNLLKVTVPIVSRATCRAQYG-TSAITNQMFCAGVSSGGKDSCQGDSGGPIVD-----SSNTLIGAVSWGNGCARPN  205 (224)
T ss_dssp             CCCSBCEEEEEEEECHHHHHHHHC-TTTSCTTEEEECCTTCCCBCCTTCTTCEEEC-----TTCCEEEEEEECSSSSCTT
T ss_pred             cCCCEeeeeEEEEeCHHHHhcccc-cCccccceeeeecCCCCccccccccCCceEe-----cCCEEEEEEEeCCCCCCCC
Confidence            345679999999999999998543 3446778888876677788999999999995     3357899999987773   


Q ss_pred             ---eeeeccccceecce
Q psy1243          88 ---VLSKMIRFYASVGI  101 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~  101 (121)
                         +|+++..|.+||..
T Consensus       206 ~p~vyt~v~~y~~WIe~  222 (224)
T d1gdna_         206 YSGVYASVGALRSFIDT  222 (224)
T ss_dssp             CCEEEEETTTTHHHHHH
T ss_pred             CCEEEEEHHHHHHHHHH
Confidence               79999999999963

>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.5e-12  Score=87.47  Aligned_cols=94  Identities=24%  Similarity=0.362  Sum_probs=77.2

Q ss_pred             CCccccccceEEEeccChhhhcccccC----CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAY----GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR   84 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~----~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~   84 (121)
                      .+..+..|+.+.+++++.+.|++.+..    ...+.+.++|++......+.|.||+||||++.....+.+++.|++|++.
T Consensus       134 ~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~  213 (242)
T d1q3xa1         134 RGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGS  213 (242)
T ss_dssp             TSSCCSBCEEEEEEEECHHHHHHHTSSTTSCTTCSCTTEEEECCSSCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECC
T ss_pred             cCccccceeeeeccccCHHHHHhhhhcccccCceeccceeeeeccCCCccccccccccceEEeeCCCCeEEEEEEEEeCC
Confidence            455678899999999999999986532    2346778899987677788999999999999988878889999999864


Q ss_pred             -Ccc------eeeeccccceeccee
Q psy1243          85 -ACY------VLSKMIRFYASVGIE  102 (121)
Q Consensus        85 -~~~------wi~~v~~~~~wi~~~  102 (121)
                       .|.      .|+++..|.+||...
T Consensus       214 ~~c~~~~~p~vft~v~~~~~WI~~~  238 (242)
T d1q3xa1         214 MNCGEAGQYGVYTKVINYIPWIENI  238 (242)
T ss_dssp             SSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCCCCCEEEEEHHHhHHHHHHH
Confidence             342      789999999999653

>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Trypsin(ogen)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.34  E-value=1.5e-12  Score=87.41  Aligned_cols=88  Identities=36%  Similarity=0.658  Sum_probs=72.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .....+..|+...+++++.++|++.  +...+.+.++|++...+..+.|.||+|+||+++      +.+.||.|++..|.
T Consensus       127 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~c~~~~~~~~~~~~gd~g~pl~~~------~~L~Gi~S~g~~c~  198 (223)
T d1hj9a_         127 SGTSYPDVLKCLKAPILSDSSCKSA--YPGQITSNMFCAYGLEGKGDSCQGDSGGPVVCS------GKLQGIVSWGSGCQ  198 (223)
T ss_dssp             SSCCCCSSCEEEEEECCCHHHHHHH--STTTCCTTEEECCCCCCCCCCCTTCTTCEEEET------TEEEEEEEECSCCC
T ss_pred             CCCCCCccceEEEEeecCHHHHHHH--hCCcccccceEEeecCCCcccccCCCCceeEEe------CEEEEEEEEcCCCC
Confidence            3455667899999999999999994  556678899999876677889999999999984      45789988887663


Q ss_pred             ------eeeeccccceecceec
Q psy1243          88 ------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~~  103 (121)
                            +|+++..|.+||...+
T Consensus       199 ~~~~p~vyt~v~~~~~WI~~~i  220 (223)
T d1hj9a_         199 AKNKPGVYTKVCNYVSWIKQTI  220 (223)
T ss_dssp             CCCCCCEEEEGGGGHHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHHH
Confidence                  8899999999997654

>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor Xa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.1e-12  Score=86.92  Aligned_cols=91  Identities=27%  Similarity=0.449  Sum_probs=75.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      ..+.....++...+++++.+.|...  +...+..+++|+.........|.||+||||++...+.  +++.|+++++..|.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~gdsGgpl~~~~~~~--~~L~Gv~s~g~~c~  210 (233)
T d2p3ub1         135 EKGRQSTRLKMLEVPYVDRNSCKLS--SSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDT--YFVTGIVSWGEGCA  210 (233)
T ss_dssp             TTSCBCSBCEEEEEEBCCHHHHHHH--CSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTE--EEEEEEEEECSSSS
T ss_pred             cCCCccccccccccccccchhhhcc--cCceEeecceeeecccccCCCcCCCcccccEEecCCe--EEEEEEEEECCCCC
Confidence            3455667789999999999999984  4455678899987667788899999999999988764  57899999998773


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            .|+++..|.+||...
T Consensus       211 ~~~~p~vyt~v~~y~~WI~~~  231 (233)
T d2p3ub1         211 RKGKYGIYTKVTAFLKWIDRS  231 (233)
T ss_dssp             CTTCCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCEEEEEHHHHHHHHHHH
Confidence                  799999999999764

>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.33  E-value=1.8e-12  Score=87.59  Aligned_cols=92  Identities=29%  Similarity=0.537  Sum_probs=74.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc--
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC--   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~--   86 (121)
                      .......|+...+++++.+.|...+.......+.++|++. ....+.|.||+|+||++..++  .+++.||+|++..+  
T Consensus       138 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~-~~~~~~c~gDsG~pl~~~~~~--~~~lvGI~S~~~~~~c  214 (240)
T d1gvkb_         138 NGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNG--QYAVHGVTSFVSRLGC  214 (240)
T ss_dssp             TCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECC-SSSCBCCTTCTTCEEEEEETT--EEEEEEEEEECBTTBS
T ss_pred             cccccceeeEEEEEEEcHHHhcceeccCCccCCceEEecC-CCCCccccCccccceEEEECC--EEEEEEEEEEcCCCCC
Confidence            4455678999999999999999865555567889999985 566789999999999998865  45789999877532  


Q ss_pred             ------ceeeeccccceecceec
Q psy1243          87 ------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~~~  103 (121)
                            ..|+++..|.+||...+
T Consensus       215 ~~~~~p~vyt~v~~~~~WI~~~i  237 (240)
T d1gvkb_         215 NVTRKPTVFTRVSAYISWINNVI  237 (240)
T ss_dssp             SCTTCCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHhHHHHHHHH
Confidence                  28999999999997543

>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Procarboxypeptidase A-S6 subunit III (zymogen E)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.31  E-value=2.4e-12  Score=87.03  Aligned_cols=93  Identities=27%  Similarity=0.504  Sum_probs=74.2

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC--
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA--   85 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~--   85 (121)
                      .++..+..|+...+++++.+.|.+.+.....+.+.++|++  ..+...|.||+||||++...+ +.+++.|+.++...  
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~--~~~~~~~~gdsGgpl~~~~~~-~~~~L~Gi~s~~~~~~  205 (232)
T d1fona_         129 TGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAG--GDTRSGCNGDSGGPLNCPAAD-GSWQVHGVTSFVSAFG  205 (232)
T ss_dssp             CSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEEC--CSSSCSTTSCTTCEEEEECSS-SCEEEEEEEEECCTTC
T ss_pred             CCCCCCCcceEEEEEEEcHHHhhhhhccCceeeeceeeec--cccccccccCCCCceEEEccC-CCEEEEEEEEEcCCCC
Confidence            4566778999999999999999986555556788899997  556789999999999987654 34678999887533  


Q ss_pred             cc------eeeeccccceecceec
Q psy1243          86 CY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        86 ~~------wi~~v~~~~~wi~~~~  103 (121)
                      |.      .|++|..|.+||...+
T Consensus       206 c~~~~~p~vyt~V~~y~~WI~~~i  229 (232)
T d1fona_         206 CNTIKKPTVFTRVSAFIDWIDETI  229 (232)
T ss_dssp             SSBTTBCEEEEEGGGSHHHHHHHH
T ss_pred             CCCCCCCEEEEEHHHHHHHHHHHH
Confidence            32      7899999999997654

>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase (mast cell protease I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3.9e-12  Score=85.66  Aligned_cols=87  Identities=18%  Similarity=0.372  Sum_probs=67.3

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..|+.+.+.+++.++|++.  + .......+|+.......+.|.||+||||+++      +.+.||++++..|.
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~C~~~--~-~~~~~~~~~~~~~~~~~~~c~gDsG~PL~~~------~~l~GI~s~g~~~~  201 (224)
T d1nn6a_         131 VLKPGSDTLQEVKLRLMDPQACSHF--R-DFDHNLQLCVGNPRKTKSAFKGDSGGPLLCA------GVAQGIVSYGRSDA  201 (224)
T ss_dssp             SSCCCCSBCEEEEEEBCCGGGGTTS--T-TCCTTTEEEECCTTTC--CCCCCTTCEEEET------TEEEEEEEECCTTC
T ss_pred             cCCCccccceEEEEEecCHHHHhhh--c-ccccceeeeccCccccccccCCCccceEEEC------CEEEEEEEECCCCC
Confidence            4556778899999999999999873  2 2345667777655666789999999999984      47899998876553


Q ss_pred             ----eeeeccccceecceec
Q psy1243          88 ----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~~  103 (121)
                          .|+++..|.+||...+
T Consensus       202 ~~p~vyt~v~~y~~WI~~~i  221 (224)
T d1nn6a_         202 KPPAVFTRISHYRPWINQIL  221 (224)
T ss_dssp             CSCEEEEEHHHHHHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHHH
Confidence                8899999999997654

>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Enteropeptidase (enterokinase light chain)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.29  E-value=5.9e-12  Score=85.03  Aligned_cols=91  Identities=35%  Similarity=0.580  Sum_probs=74.2

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      .+.....|++..+.+.+.+.|...+ ......+.++|+....+..+.|.||+||||++.+.+  .+++.|+++++..|. 
T Consensus       137 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~~~~~c~gdsG~pl~~~~~~--~~~l~Gi~S~g~~~~~  213 (235)
T d1ekbb_         137 QGSTADVLQEADVPLLSNEKCQQQM-PEYNITENMVCAGYEAGGVDSCQGDSGGPLMCQENN--RWLLAGVTSFGYQCAL  213 (235)
T ss_dssp             TSCBCSBCEEEEEEBCCHHHHHHHC-TTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSC
T ss_pred             CCcccccceeeEEEEecHHHhcccc-cccccCcccEEEEcCCCCcccccCCCCCccEEccCC--EEEEEEEEEecCCCCC
Confidence            3455667899999999999998743 344578889999876677789999999999998876  467899999987663 


Q ss_pred             -----eeeeccccceeccee
Q psy1243          88 -----VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~  102 (121)
                           +|+++..|++||...
T Consensus       214 ~~~p~v~t~v~~y~~WI~~~  233 (235)
T d1ekbb_         214 PNRPGVYARVPRFTEWIQSF  233 (235)
T ss_dssp             TTCCEEEEEGGGTHHHHHTT
T ss_pred             CCCCEEEEEHHHHHHHHHHh
Confidence                 899999999999753

>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.8e-12  Score=90.93  Aligned_cols=91  Identities=13%  Similarity=0.265  Sum_probs=62.9

Q ss_pred             cccccceEEEeccChhhh---ccccc----------CCCCcCCCeEEEeecC--CCCCCccCCCcceEEEeeCCcccCce
Q psy1243          12 NALTLKAARVGTLSQESC---RKEDA----------YGTRIKDSMFCAGSFQ--GGADSCQGDSGGPIVCDIQGCDKGAS   76 (121)
Q Consensus        12 ~~~~L~~~~l~~~~~~~C---~~~~~----------~~~~~~~~~~Cag~~~--~~~~~C~gDsGgPLv~~~~~~~~~~~   76 (121)
                      ....|+...+.+.+...|   .....          ....++++|||||...  .+.++|.|||||||+++.++.  +++
T Consensus       159 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Cag~~~~~~~~~~C~GDSGgPL~~~~~~~--~~l  236 (287)
T d1rrka1         159 EEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSR--FIQ  236 (287)
T ss_dssp             SSSCEEEEEEEEECSTTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTE--EEE
T ss_pred             CCceeEEEEEEEeccchhhhhhhhhhccccccccccccccccCCceEecccCCCcCCCCCCCCccCCeEEecCCe--EEE
Confidence            345566666666654443   32111          1224678999998533  345789999999999987664  588


Q ss_pred             eEEEEeCCC----------------cceeeeccccceecceecc
Q psy1243          77 LGTDRLSRA----------------CYVLSKMIRFYASVGIEAT  104 (121)
Q Consensus        77 ~g~~~v~~~----------------~~wi~~v~~~~~wi~~~~~  104 (121)
                      .||+|++..                ..+|++|..|.+||...+.
T Consensus       237 vGI~S~G~~~~~~~~~~~~~~~~~~~~vyt~V~~y~~WI~~~i~  280 (287)
T d1rrka1         237 VGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQ  280 (287)
T ss_dssp             EEEEEEESCCCC--------CCTTCEEEEEEGGGGHHHHHHHTT
T ss_pred             EEEEEecCCcCcCCCCCCCcCCCCCCcEEEEHHHHHHHHHHHhc
Confidence            999998521                2379999999999987764

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=99.29  E-value=4.2e-12  Score=84.98  Aligned_cols=86  Identities=26%  Similarity=0.549  Sum_probs=70.0

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++..+..++...+..++...|.+.   ...+.+.++|++. ....+.|.+|+|+||+++      +.+.|+++++..|+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~c~~~---~~~~~~~~~c~~~-~~~~~~c~~d~G~pl~~~------~~L~GI~s~~~~c~  199 (222)
T d1eq9a_         130 LGGNTPNALQEIELIVHPQKQCERD---QWRVIDSHICTLT-KRGEGACHGDSGGPLVAN------GAQIGIVSFGSPCA  199 (222)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHH---SSSCCTTEEEECC-CTTCBCCTTCTTCEEEET------TEEEEEEEECSTTT
T ss_pred             CCCCCCccceEEEEEEechHHhccc---cccccCcceEecc-CCCCCccccCCcCCEEEc------CEEEEEEEECCCCC
Confidence            3456778899999999999999983   3346788999985 556789999999999983      46889998887664


Q ss_pred             -----eeeeccccceecceec
Q psy1243          88 -----VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~  103 (121)
                           .|+++..|.+||..++
T Consensus       200 ~~~p~vyt~v~~y~~WI~~~i  220 (222)
T d1eq9a_         200 LGEPDVYTRVSSFVSWINANL  220 (222)
T ss_dssp             SSSCEEEEEGGGGHHHHHHTS
T ss_pred             CCCCcEEEEHHHHHHHHHHHh
Confidence                 8899999999998654

>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.7e-12  Score=84.67  Aligned_cols=86  Identities=33%  Similarity=0.574  Sum_probs=66.7

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-cc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-CY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~~   87 (121)
                      .+..+..|+...+++++.++|++.  +...+.+.++|......+...|.||+||||+++.      ++.||.|++.. |.
T Consensus       127 ~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~c~gd~G~Pl~~~~------~l~Gi~S~g~~~c~  198 (221)
T d1lo6a_         127 DGDFPDTIQCAYIHLVSREECEHA--YPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGD------HLRGLVSWGNIPCG  198 (221)
T ss_dssp             TSSCCSBCEEEEEEEECHHHHHHH--STTTCCTTEEEEECTTTCCBCCTTTTTCEEEETT------EEEEEEEECCSSCC
T ss_pred             CCCCCccceEEEEEEecHHHHHHH--cCCCccCCceeeeccccCCCCccCCCCCcEEECC------EEEEEEEEccCCCC
Confidence            345567899999999999999994  4455666777776567788899999999999842      57888887653 32


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            .|+++..|.+||...
T Consensus       199 ~~~~p~vyt~v~~~~~WI~~~  219 (221)
T d1lo6a_         199 SKEKPGVYTNVCRYTNWIQKT  219 (221)
T ss_dssp             CSSSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCeEEEEHHHHHHHHHHH
Confidence                  688888898998754

>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.27  E-value=6e-12  Score=84.78  Aligned_cols=88  Identities=22%  Similarity=0.300  Sum_probs=69.4

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ....+..|+...+++++++.|...+. ........+|++........|.||+||||+++      +++.|++|++..|. 
T Consensus       134 ~~~~~~~l~~~~~~~~~~~~c~~~~~-~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~~~------~~l~Gi~S~g~~~~~  206 (227)
T d1fi8a_         134 MGKYSDTLQEVELTVQEDQKCESYLK-NYFDKANEICAGDPKIKRASFRGDSGGPLVCK------KVAAGIVSYGQNDGS  206 (227)
T ss_dssp             TCCBCSBCEEEEEEBCCHHHHHHHTT-TTCCTTTEEEESCTTSCCBCCTTCTTSEEEET------TEEEEEEEEEETTCC
T ss_pred             CCCCCceeeEEEEEEEEchhhhhhhh-cccccceeeeeeeccccCCCcCCCcCCEEEEC------CEEEEEEEEcCCCCC
Confidence            34567789999999999999998532 33456778888766777889999999999983      47788888876663 


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         .|+++..|.+||...+
T Consensus       207 ~p~vyt~v~~y~~WI~~~i  225 (227)
T d1fi8a_         207 TPRAFTKVSTFLSWIKKTM  225 (227)
T ss_dssp             SCEEEEEGGGGHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHH
Confidence               8899999999987643

>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Chymase II (mast cell proteinase II)
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.26  E-value=4.3e-12  Score=85.54  Aligned_cols=85  Identities=18%  Similarity=0.350  Sum_probs=68.3

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      ++.....|+++.+++++.+.|.+.+   ......++|++........|.+|+||||+++      +++.|+.+++.-|. 
T Consensus       134 ~~~~~~~l~~~~~~~~~~~~C~~~~---~~~~~~~~~~~~~~~~~~~c~~d~G~Pl~~~------~~l~Gi~S~g~~~~~  204 (224)
T d3rp2a_         134 RDPTSYTLREVELRIMDEKACVDYR---YYEYKFQVCVGSPTTLRAAFMGDSGGPLLCA------GVAHGIVSYGHPDAK  204 (224)
T ss_dssp             TEEECSBCEEEEEEEECGGGTTTTT---CCCTTTEEEECCTTSCCBCCTTTTTCEEEET------TEEEEEEEECCTTCC
T ss_pred             CCCccceeeEEEEEccCHHHhhhcc---cccccceeeeccCcccccCcCCCcCCeEEEc------CEEEEEEEECCCCCC
Confidence            4455667999999999999999842   3356778888766677889999999999983      47899988886553 


Q ss_pred             ---eeeeccccceeccee
Q psy1243          88 ---VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~  102 (121)
                         +|+++..|.+||..-
T Consensus       205 ~p~vyt~v~~~~~WI~~v  222 (224)
T d3rp2a_         205 PPAIFTRVSTYVPWINAV  222 (224)
T ss_dssp             SCEEEEEHHHHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHH
Confidence               889999999998753

>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: 7S NGF protease subunits
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=3.8e-12  Score=85.73  Aligned_cols=89  Identities=30%  Similarity=0.633  Sum_probs=64.3

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Cc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-AC   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~   86 (121)
                      ..+..+..|+...+.+++.+.|+..  +.....+.++|++...++...|.+|+|+||+++      +++.|++|++. .|
T Consensus       130 ~~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~G~pl~~~------~~l~Gv~S~g~~~c  201 (228)
T d1sgfa_         130 IKFKYPDDLQCVNLKLLPNEDCDKA--HEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICD------GILQGITSWGPEPC  201 (228)
T ss_dssp             C---------CEEEEEECTHHHHTT--CSSBCCTTEEEEEECSSSEEECCCCTTCEEEET------TEEEEEECCCCSSC
T ss_pred             CccCCCCccEEEEEEEeCHHHhhhh--ccCCcccceEEeccCCCCccccCCCcCCcEEEe------CEEEEEEEECCCCC
Confidence            3456678899999999999999983  445567889999877777889999999999983      47788888764 33


Q ss_pred             ------ceeeeccccceecceecc
Q psy1243          87 ------YVLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~~~~  104 (121)
                            .+|+++..|.+||...+.
T Consensus       202 ~~~~~p~vyt~V~~~~~WI~~~i~  225 (228)
T d1sgfa_         202 GEPTEPSVYTKLIKFSSWIRETMA  225 (228)
T ss_dssp             CCSSCCEEEEESGGGHHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHHHHHHHHHHh
Confidence                  278999999999876653

>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Complement C1S protease, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.2e-11  Score=84.77  Aligned_cols=92  Identities=25%  Similarity=0.403  Sum_probs=72.1

Q ss_pred             ccccccceEEEeccChhhhcccccC-------CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeC-CcccCceeEEEEe
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAY-------GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQ-GCDKGASLGTDRL   82 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~-------~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~-~~~~~~~~g~~~v   82 (121)
                      .....++...+.+++...|...+..       ...+.+.++|++. ..+.+.|.||+||||++... +-.++++.|++++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~c~gDsGgPl~~~~~~~~~~~~l~Gi~S~  231 (259)
T d1elva1         153 DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGG-EKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSW  231 (259)
T ss_dssp             SSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEEEEEC-STTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEE
T ss_pred             ccccccccceeeEechhhceeeeecccccccccceeecceeeccC-CCCCccCCCCcCCeEEEEecCCCcEEEEEEEEEe
Confidence            3455788899999999999875432       1236778889885 56678999999999999864 4456789999999


Q ss_pred             CCCcc---eeeeccccceecceec
Q psy1243          83 SRACY---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        83 ~~~~~---wi~~v~~~~~wi~~~~  103 (121)
                      +..|.   .|+++..|.+||...+
T Consensus       232 ~~~c~~p~vft~V~~~~~WI~~~i  255 (259)
T d1elva1         232 GPQCGTYGLYTRVKNYVDWIMKTM  255 (259)
T ss_dssp             CSSTTSEEEEEEGGGGHHHHHHHH
T ss_pred             CCCCCCceEEeEHHHHHHHHHHHH
Confidence            98886   8999999999997655

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-11  Score=83.73  Aligned_cols=89  Identities=28%  Similarity=0.598  Sum_probs=69.8

Q ss_pred             ccccccceEEEeccChhhhcccccCC-------CCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYG-------TRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS   83 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~-------~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~   83 (121)
                      ..+..|++..+++++.+.|++.+...       ..+...++|.+  ..+.+.|.||+||||++..++  .+++.|+++++
T Consensus       140 ~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gdsGgpl~~~~~~--~~~L~Gi~s~~  215 (243)
T d2fpza1         140 PPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSGGPLVCKVNG--TWLQAGVVSWG  215 (243)
T ss_dssp             CTTCBCEEEEEEEECHHHHHHHHHTTBCSCTTSCSSCTTEEEEC--CSSSBCCTTCTTCEEEEEETT--EEEEEEEEEEC
T ss_pred             CCCcEeEEEEEeecCHHHhhhhhhcccccCCccceeeeeeEecC--CCCCCCccCCCCCeEEEeeCC--EEEEEEEEEEC
Confidence            34567899999999999998765321       12455567766  666789999999999998875  35889999988


Q ss_pred             CCcc------eeeeccccceecceec
Q psy1243          84 RACY------VLSKMIRFYASVGIEA  103 (121)
Q Consensus        84 ~~~~------wi~~v~~~~~wi~~~~  103 (121)
                      ..|.      +|+++..|.+||...+
T Consensus       216 ~~~~~~~~p~v~t~v~~y~~WI~~~i  241 (243)
T d2fpza1         216 EGCAQPNRPGIYTRVTYYLDWIHHYV  241 (243)
T ss_dssp             SSSSBTTBCEEEEEGGGGHHHHTTTS
T ss_pred             CCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence            7773      7899999999997643

>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Kallikrein-13
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=1.4e-11  Score=83.40  Aligned_cols=86  Identities=33%  Similarity=0.695  Sum_probs=69.2

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C--   86 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~--   86 (121)
                      ...+..++...+..++...|..  .....+.+.++|++......+.|.||+||||+++      +.+.|++|++.. |  
T Consensus       141 ~~~~~~~~~~~~~~~~~~~c~~--~~~~~~~~~~~~~~~~~~~~~~c~gdsG~pl~~~------~~l~Gi~S~g~~~c~~  212 (237)
T d1ao5a_         141 WQKPDDLQCVFITLLPNENCAK--VYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICD------GILQGTTSYGPVPCGK  212 (237)
T ss_dssp             CCCCSBCEEEEEEEECHHHHHH--HCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEET------TEEEEEEEECCSSTTC
T ss_pred             ccCCccceeeEEEEEehHHhhh--hhcCCCCCCeEEEccCCCCCcccCCCCCCeeEEc------cEEEEEEEEecCCCCC
Confidence            3456678889999999999998  4556678899999866667889999999999984      477888887643 3  


Q ss_pred             ----ceeeeccccceecceec
Q psy1243          87 ----YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ----~wi~~v~~~~~wi~~~~  103 (121)
                          .+|+++..|.+||...+
T Consensus       213 ~~~p~vft~V~~y~~WI~~~i  233 (237)
T d1ao5a_         213 PGVPAIYTNLIKFNSWIKDTM  233 (237)
T ss_dssp             TTCCEEEECGGGGHHHHHHHH
T ss_pred             CCCCeEEEEHHHHHHHHHHHH
Confidence                28899999999987655

>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Trypsin
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=99.22  E-value=5e-12  Score=85.34  Aligned_cols=95  Identities=28%  Similarity=0.474  Sum_probs=72.7

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEee-cCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGS-FQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~-~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      .++..+..|+...+.+++.++|+..+.. ......++|++. ..+..+.|.+|+|+||++.+.+ ..+++.|+++++..|
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~G~pl~~~~~~-~~~~L~Gi~s~~~~c  197 (223)
T d1os8a_         120 EGGSQQRYLLKANVPFVSDAACRSAYGN-ELVANEEICAGYPDTGGVDTCQGDSGGPMFRKDNA-DEWIQVGIVSWGYGC  197 (223)
T ss_dssp             TTCCCCSBCEEEEEEEECHHHHHHHHGG-GSCTTTEEEESCTTTCCCBCCTTCTTCEEEEECTT-SCEEEEEEEEECSSS
T ss_pred             cccccccccccceeeEeCHHHhhhhhcC-CCccCcceeeeccccCCcCccccccccceEEecCC-CeEEEEEEEEeCCCC
Confidence            3456678899999999999999885433 233455555543 3455688999999999998665 457899999998877


Q ss_pred             c------eeeeccccceecceecc
Q psy1243          87 Y------VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~~  104 (121)
                      .      +|+++..|.+||...+.
T Consensus       198 ~~~~~p~vft~V~~y~~WI~~~~k  221 (223)
T d1os8a_         198 ARPGYPGVYTEVSTFASAIASAAR  221 (223)
T ss_dssp             SCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHHh
Confidence            3      79999999999986653

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.20  E-value=3.3e-11  Score=80.91  Aligned_cols=87  Identities=25%  Similarity=0.438  Sum_probs=67.3

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY   87 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~   87 (121)
                      .++.....++...+.++++++|+..  +.......++|.+....+.+.|.+|+||||+++      +++.|+.+++..|.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~c~~dsGgpl~~~------~~l~Gi~s~g~~~~  203 (224)
T d1eufa_         132 VNMPSTDKLQEVDLEVQSEEKCIAR--FKNYIPFTQICAGDPSKRKNSFSGDSGGPLVCN------GVAQGIVSYGRNDG  203 (224)
T ss_dssp             TTCCBCSBCEEEEEEBCCTHHHHTT--CTTCCTTTEEEESCTTSCCBCCTTCTTCEEEET------TEEEEEEEECCTTC
T ss_pred             ccccccccceeeeeccCCHHHHHHH--hccccccceeeeeccccccccccCCCCCeEEEc------CEEEEEEEEcCCCC
Confidence            4456667889999999999999984  444455666666655677889999999999984      36788888876653


Q ss_pred             ----eeeeccccceeccee
Q psy1243          88 ----VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ----wi~~v~~~~~wi~~~  102 (121)
                          .|+++..|.+||...
T Consensus       204 ~~p~vft~V~~y~~WI~~~  222 (224)
T d1eufa_         204 TTPDVYTRISSFLSWIHST  222 (224)
T ss_dssp             CSCEEEEEGGGTHHHHHHH
T ss_pred             CCCeEEEEHHHHHHHHHHH
Confidence                888888888888754

>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Crab collagenase
species: Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]

Probab=99.17  E-value=9.6e-12  Score=83.80  Aligned_cols=85  Identities=25%  Similarity=0.481  Sum_probs=64.0

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc--
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY--   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~--   87 (121)
                      ......|++..+++++.++|++.+  ... ...++|... ..+.+.|.||+||||+++      +++.|++|++..+.  
T Consensus       132 ~~~~~~l~~~~~~~~~~~~C~~~~--~~~-~~~~~~~~~-~~~~~~c~gdsG~Pl~~~------~~l~Gi~S~g~~~~~~  201 (226)
T d1azza_         132 LGISDVLRQVDVPIMSNADCDAVY--GIV-TDGNICIDS-TGGKGTCNGDSGGPLNYN------GLTYGITSFGAAAGCE  201 (226)
T ss_dssp             SSSCSBCEECCEEEECHHHHHHHH--SCC-CTTEEEECC-TTTCBCCTTCTTCEEEET------TEEEEEEEEEETTCTT
T ss_pred             CccccEeEEEEEEEEeHHHhhhhh--Ccc-cccceeccc-cCCCccccCCcCCCEEEc------CEEEEEEEEeCCCCCC
Confidence            344568999999999999999853  232 344555442 567789999999999974      46788888765542  


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           +|+++..|.+||...+.
T Consensus       202 ~~~p~v~t~v~~y~~WI~~~~g  223 (226)
T d1azza_         202 AGYPDAFTRVTYFLDWIQTQTG  223 (226)
T ss_dssp             SCCCEEEEESGGGHHHHHHHHC
T ss_pred             CCCCEEEEEHHHhHHHHHHHhC
Confidence                 78999999999987765

>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Salmon (Salmo salar) [TaxId: 8030]

Probab=99.15  E-value=6.7e-11  Score=79.54  Aligned_cols=89  Identities=26%  Similarity=0.591  Sum_probs=68.5

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--Cc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--AC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--~~   86 (121)
                      +......+++..+.+++.++|.............++|+.  ....+.|.||+||||++...+  .+++.||++++.  .|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~c~gdsGgpl~~~~~~--~~~l~GI~s~~~~~~c  213 (236)
T d1elta_         138 GGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG--GGANSGCNGDSGGPLNCQVNG--SYYVHGVTSFVSSSGC  213 (236)
T ss_dssp             TCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEEC--CSSCBCCTTCTTCEEEEEETT--EEEEEEEEEECCSSCT
T ss_pred             CcccCccceeeeeEEEcHHHhhhhcccccccceeeeecC--CccccccccccccceEEEECC--eEEEEEEEEEeCCCCC
Confidence            445567889999999999999986544444566677765  455689999999999998865  467899988753  33


Q ss_pred             ------ceeeeccccceecce
Q psy1243          87 ------YVLSKMIRFYASVGI  101 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~  101 (121)
                            .+|+++..|++||..
T Consensus       214 ~~~~~p~vyt~v~~y~~WI~~  234 (236)
T d1elta_         214 NASKKPTVFTRVSAYISWMNG  234 (236)
T ss_dssp             TCTTCCEEEEEGGGGHHHHHH
T ss_pred             CCCCCCEEEEEHHHHHHHHHH
Confidence                  279999999999964

>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=5.8e-11  Score=80.14  Aligned_cols=89  Identities=24%  Similarity=0.522  Sum_probs=71.0

Q ss_pred             ccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc---
Q psy1243          11 SNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY---   87 (121)
Q Consensus        11 ~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~---   87 (121)
                      .....++...+++++.+.|...  +........+|........+.|.||+|+||+++..+  .+++.|+++++..|.   
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~gd~G~pl~~~~~~--~~~l~Gi~s~g~~c~~~~  219 (240)
T d1autc_         144 NRTFVLNFIKIPVVPHNECSEV--MSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHG--TWFLVGLVSWGEGCGLLH  219 (240)
T ss_dssp             SCSSBCEEEEEEEECHHHHHHH--CSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETT--EEEEEEEEEECSSSSCTT
T ss_pred             ccceeeecceeeEEeehhhhhh--cccccccceeeeccccccCCCcCCccCceeEEcCCC--CEEEEEEEEeCCCCCCCC
Confidence            3445678888999999999984  344455667777656677889999999999998875  468999999987763   


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         +|+++..|.+||...+
T Consensus       220 ~p~vftrv~~y~~WI~~~i  238 (240)
T d1autc_         220 NYGVYTKVSRYLDWIHGHI  238 (240)
T ss_dssp             CCEEEECGGGTHHHHHHHH
T ss_pred             CCeEEEEHHHHHHHHHHHh
Confidence               8999999999997654

>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Worm (Eisenia fetida) [TaxId: 6396]

Probab=99.13  E-value=8.8e-11  Score=79.08  Aligned_cols=91  Identities=21%  Similarity=0.428  Sum_probs=67.4

Q ss_pred             CCccccccceEEEeccChhhhcccccC--CCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC--
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAY--GTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR--   84 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~--~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~--   84 (121)
                      .+..+..++.+.+++++.++|++.+..  ........+|++......+.|.||+||||++...+   +...|++++..  
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sGgpl~~~~~~---~~l~Gi~s~~~~~  214 (241)
T d1m9ua_         138 TNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGG---TRVVGVTSWVVSS  214 (241)
T ss_dssp             SSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSS---EEEEEEEEECCBC
T ss_pred             CCCCCCcceEEEEEeechhHhhhhhhcccccccccceeEeecccCCcCcccCCCCcceEEecCC---EEEEEEEEEEEcC
Confidence            445578899999999999999986432  22345667777766677889999999999987543   34677765432  


Q ss_pred             --Cc------ceeeeccccceeccee
Q psy1243          85 --AC------YVLSKMIRFYASVGIE  102 (121)
Q Consensus        85 --~~------~wi~~v~~~~~wi~~~  102 (121)
                        .|      ..|++|..|.+||..+
T Consensus       215 g~~~~~~~~p~vft~V~~y~~WI~~n  240 (241)
T d1m9ua_         215 GLGACLPDYPSVYTRVSAYLGWIGDN  240 (241)
T ss_dssp             TTSCBCTTSCEEEEEGGGTHHHHHHH
T ss_pred             CCCCCCCCCCEEEEEHHHhHHHHHHc
Confidence              22      2899999999999765

>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Prostate specific antigen (PSA kallikrein)
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.13  E-value=3.7e-11  Score=80.99  Aligned_cols=87  Identities=24%  Similarity=0.532  Sum_probs=66.3

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C-   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~-   86 (121)
                      .+..+..|++..+++++.+.|++.  +...+.+.++|+....++...|.||+||||+++      +.+.|+++++.. | 
T Consensus       140 ~~~~~~~l~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~------~~l~Gv~s~g~~~c~  211 (237)
T d1gvza_         140 TNRGSGTLQCVELRLQSNEKCARA--YPEKMTEFVLCATHRDDSGSICLGDSGGALICD------GVFQGITSWGYSECA  211 (237)
T ss_dssp             TCSEEEEEEEEEEEEECGGGGCSS--CGGGCCTTEEEEECSSTTCEECGGGTTCEEEET------TEEEEEECCCSSSCE
T ss_pred             cccccceeeEEEEEeecHHHHHhh--cccccccccccceecccccccccCCCCCcEEEc------CEEEEEEEeccCCCC
Confidence            344567799999999999999994  445566778888766677889999999999984      366777776532 2 


Q ss_pred             -----ceeeeccccceecceec
Q psy1243          87 -----YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 -----~wi~~v~~~~~wi~~~~  103 (121)
                           .+|+++..|.+||...+
T Consensus       212 ~~~~p~v~t~v~~y~~WI~~~i  233 (237)
T d1gvza_         212 DFNDNFVFTKVMPHKKWIKETI  233 (237)
T ss_dssp             ETTTSCCEEESGGGHHHHHHHH
T ss_pred             CCCCCeEEEEHHHHHHHHHHHH
Confidence                 37888888888886544

>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Venom serine protease
species: Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]

Probab=99.09  E-value=2.2e-10  Score=77.24  Aligned_cols=87  Identities=25%  Similarity=0.549  Sum_probs=65.7

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCc-CCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Cc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRI-KDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-AC   86 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~-~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~   86 (121)
                      +......|+...+.+++...|...  ....+ ...++|........+.|.||+|+||++.      ++..||++++. .|
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~G~Pl~~~------~~l~Gi~S~g~~~c  201 (234)
T d1op0a_         130 KETFPDVPYCANINLLDHAVCQAG--YPELLAEYRTLCAGIVQGGKDTCGGDSGGPLICN------GQFQGIVSYGAHPC  201 (234)
T ss_dssp             SCCCCSSCEEEEEEEECHHHHHHH--CTTCCTTSCEEEEECTTCCCBCCTTCTTCEEEET------TEEEEEEEECCSST
T ss_pred             ccccccccccccceEechHHhccc--ccCcceeeeeeeecccccccccccCCCCceEEEc------CEEEEEEEEcCCCC
Confidence            344556789999999999999984  33333 4455565555567889999999999974      46788888763 33


Q ss_pred             ------ceeeeccccceecceec
Q psy1243          87 ------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~~~  103 (121)
                            ..|+++..|.+||...+
T Consensus       202 ~~~~~p~vft~v~~y~~WI~~~i  224 (234)
T d1op0a_         202 GQGPKPGIYTNVFDYTDWIQRNI  224 (234)
T ss_dssp             TCTTSCEEEEESGGGHHHHHHHH
T ss_pred             CCCCCCeEEEEHHHHHHHHHHHH
Confidence                  27899999999998776

>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Granzyme B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=81.04  Aligned_cols=88  Identities=20%  Similarity=0.308  Sum_probs=67.0

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-   87 (121)
                      .+.....|+++.+.+++++.|++.+.. ......++|........+.|.||+||||+++      +.+.||++++..|. 
T Consensus       133 ~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~~~~~~~gdsG~pl~~~------~~l~GI~s~g~~~~~  205 (227)
T d1fq3a_         133 LGKHSHTLQEVKMTVQEDRKCESDLRH-YYDSTIELCVGDPEIKKTSFKGDSGGPLVCN------KVAQGIVSYGRNNGM  205 (227)
T ss_dssp             TSCCCSBCCBCEEECCCHHHHTTTCTT-TCCTTTEECCSCTTSSCBCCTTCTTCBCBSS------SSCCCEECCCCTTSC
T ss_pred             cccccccceEEEEEEEcHHHhhhhhcc-cccccceeeeeccccccccccCCCCceEEEe------CEEEEEEEEcCCCCC
Confidence            456677899999999999999985432 2234445555445667889999999999974      46788888886664 


Q ss_pred             ---eeeeccccceecceec
Q psy1243          88 ---VLSKMIRFYASVGIEA  103 (121)
Q Consensus        88 ---wi~~v~~~~~wi~~~~  103 (121)
                         .|+++..|.+||...+
T Consensus       206 ~p~vyt~v~~y~~WI~~~i  224 (227)
T d1fq3a_         206 PPRACTKVSSFVHWIKKTM  224 (227)
T ss_dssp             SCCCEECHHHHHHHHHHHT
T ss_pred             CCcEEEEHHHHHHHHHHHH
Confidence               7999999999997654

>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Factor D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=3.5e-10  Score=75.32  Aligned_cols=88  Identities=22%  Similarity=0.439  Sum_probs=64.7

Q ss_pred             CCCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CC
Q psy1243           7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RA   85 (121)
Q Consensus         7 ~~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~   85 (121)
                      ...+..+..|+...+++++.++|.+.+.. .......+|+.. ..+.+.|.||+|+||+++      +++.|+++++ ..
T Consensus       132 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~gdsG~Pl~~~------~~LvGi~S~g~~~  203 (228)
T d1bioa_         132 NHAGRRPDSLQHVLLPVLDRATCNRRTHH-DGAITERLMCAE-SNRRDSCKGDSGGPLVCG------GVLEGVVTSGSRV  203 (228)
T ss_dssp             STTCCCCSBCEEEEEEEECHHHHHSTTTT-TTCCCTTEEEEC-CSSCBCCTTTTTCEEEET------TEEEEEECCSCCC
T ss_pred             cCCCCCCCcceEEEEEEeCHHHHhhhhcc-cccccccceeec-ccCCCcccCCcCccEEEc------CEEEEEEEECCCC
Confidence            44566678899999999999999985432 234455566653 667789999999999983      4678887775 33


Q ss_pred             c------ceeeeccccceeccee
Q psy1243          86 C------YVLSKMIRFYASVGIE  102 (121)
Q Consensus        86 ~------~wi~~v~~~~~wi~~~  102 (121)
                      |      ..|+++..|.+||...
T Consensus       204 c~~~~~p~v~t~v~~~~~WI~~~  226 (228)
T d1bioa_         204 CGNRKKPGIYTRVASYAAWIDSV  226 (228)
T ss_dssp             SSCTTSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCCCEEEEEHHHHHHHHHHH
Confidence            3      2688888888888653

>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: HL collagenase
species: Common cattle grub (Hypoderma lineatum) [TaxId: 7389]

Probab=99.01  E-value=6.1e-10  Score=74.81  Aligned_cols=89  Identities=20%  Similarity=0.346  Sum_probs=68.8

Q ss_pred             CccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc--c
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC--Y   87 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~--~   87 (121)
                      +.....++...+..++.+.|.+.+ ......+.++|+. .....+.|.||+||||++++    .+++.|++|++..+  .
T Consensus       132 ~~~~~~~~~~~~~~~~~~~c~~~~-~~~~~~~~~~~~~-~~~~~~~~~gdsGgp~~~~~----~~~l~Gi~S~~~~~~~~  205 (230)
T d2hlca_         132 NTDTVILQYTYNLVIDNDRCAQEY-PPGIIVESTICGD-TSDGKSPCFGDSGGPFVLSD----KNLLIGVVSFVSGAGCE  205 (230)
T ss_dssp             SSCCCBCEEEEEEEECHHHHHTTS-CTTSSCTTEEEEC-CTTSCBCCTTCTTCEEEEGG----GTEEEEEEEECCTTCTT
T ss_pred             cccchhhheeeeccccchhhhhcc-ccccccccceEec-cccCccccccccCCCeEECC----CeEEEEEEEEeCCCCCC
Confidence            445567899999999999998843 2344567788886 46678899999999999864    35789998876543  2


Q ss_pred             -----eeeeccccceecceecc
Q psy1243          88 -----VLSKMIRFYASVGIEAT  104 (121)
Q Consensus        88 -----wi~~v~~~~~wi~~~~~  104 (121)
                           .|+++..|.+||...+.
T Consensus       206 ~~~p~vyt~V~~y~~WI~~~~~  227 (230)
T d2hlca_         206 SGKPVGFSRVTSYMDWIQQNTG  227 (230)
T ss_dssp             SCCCEEEEEGGGGHHHHHHHHC
T ss_pred             CCCCeEEEEhHHhHHHHHHHhC
Confidence                 79999999999987654

>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Heparin binding protein, HBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8.9e-10  Score=73.64  Aligned_cols=82  Identities=21%  Similarity=0.404  Sum_probs=65.6

Q ss_pred             CCCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243           7 SSSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus         7 ~~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      ..++.....|+...+.+++.+.|...          ..|++......+.|.||+||||+++      +.+.|+++++..+
T Consensus       132 ~~~~~~~~~l~~~~~~~~~~~~C~~~----------~~~~~~~~~~~~~c~gdsG~Pl~~~------~~l~Gi~S~~~~~  195 (225)
T d1a7sa_         132 RSGGRLSRFPRFVNVTVTPEDQCRPN----------NVCTGVLTRRGGICNGDGGTPLVCE------GLAHGVASFSLGP  195 (225)
T ss_dssp             STTCCCCSSCEEEEEEECCGGGSCTT----------EEEEECSSSSCBCCTTCTTCEEEET------TEEEEEEEEECSS
T ss_pred             ccccccccceeEEEEEEeehhhcccc----------cceeeecccccccccCCCCCCEEEe------CEEEEEEEECCCC
Confidence            34556667899999999999999762          3566655677889999999999983      5688998887643


Q ss_pred             -----ceeeeccccceecceecc
Q psy1243          87 -----YVLSKMIRFYASVGIEAT  104 (121)
Q Consensus        87 -----~wi~~v~~~~~wi~~~~~  104 (121)
                           .+|+++..|.+||...+.
T Consensus       196 c~~~p~v~t~v~~y~~WI~~~i~  218 (225)
T d1a7sa_         196 CGRGPDFFTRVALFRDWIDGVLN  218 (225)
T ss_dssp             TTSSCEEEEEGGGGHHHHHHHHH
T ss_pred             CCCCCCEEEEHHHHHHHHHHHHC
Confidence                 389999999999988775

>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6e-10  Score=75.40  Aligned_cols=99  Identities=29%  Similarity=0.501  Sum_probs=68.9

Q ss_pred             CccccccceEEEeccChhhhccccc---CCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCc
Q psy1243          10 ASNALTLKAARVGTLSQESCRKEDA---YGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC   86 (121)
Q Consensus        10 g~~~~~L~~~~l~~~~~~~C~~~~~---~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~   86 (121)
                      +......+.....+.....|.....   ........++|+....+....|.||+||||++..++  .+++.|++|++..|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdsGgPl~~~~~~--~~~lvGi~S~g~~c  216 (254)
T d2bz6h1         139 GATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRG--TWYLTGIVSWGQGC  216 (254)
T ss_dssp             SCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETT--EEEEEEEEEECSSS
T ss_pred             CcccccceeeeecccchhhhhhhhhcccccccccccceeeeccCCCcccccCccccceEEccCC--eEEEEEEEEeCCCC
Confidence            3444445555555555544433211   123356667777655677889999999999998875  45789999998776


Q ss_pred             c------eeeeccccceecceecccccCCC
Q psy1243          87 Y------VLSKMIRFYASVGIEATSSCSPG  110 (121)
Q Consensus        87 ~------wi~~v~~~~~wi~~~~~~s~~p~  110 (121)
                      .      +|+++..|.+||...+.....|+
T Consensus       217 ~~~~~p~vytrv~~~~~WI~~~i~~~~~~~  246 (254)
T d2bz6h1         217 ATVGHFGVYTRVSQYIEWLQKLMRSEPRPG  246 (254)
T ss_dssp             SCTTCCEEEEEGGGGHHHHHHHHTSCCCSS
T ss_pred             CCCCCCEEEEEHHHHHHHHHHHHhhCCCCC
Confidence            4      89999999999987776555554

>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Elastase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=4.4e-10  Score=74.73  Aligned_cols=78  Identities=27%  Similarity=0.480  Sum_probs=56.5

Q ss_pred             CCCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCC-c
Q psy1243           8 SSASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRA-C   86 (121)
Q Consensus         8 ~~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~-~   86 (121)
                      .++..+..|+.+.+++.+ +.|+.          .+.|+.......+.|.||+||||+|+      +.+.||+|++.. |
T Consensus       132 ~~~~~~~~l~~~~~~~~~-~~c~~----------~~~~~~~~~~~~~~C~gdsG~Pl~~~------~~l~GI~s~~~~~c  194 (218)
T d2z7fe1         132 RNRGIASVLQELNVTVVT-SLCRR----------SNVCTLVRGRQAGVCFGDSGSPLVCN------GLIHGIASFVRGGC  194 (218)
T ss_dssp             SSCCBCSBCEEEEEEEEC-TTCCT----------TSEEEECTTSCCBCCTTCTTCEEEET------TEEEEEEEEESSST
T ss_pred             cccccccceeEEEecccc-cccce----------eeeeeeecCcccCccccccCCCEEEC------CEEEEEEEEecCCC
Confidence            455667788999888876 34543          35677655666789999999999984      467788776532 3


Q ss_pred             ------ceeeeccccceeccee
Q psy1243          87 ------YVLSKMIRFYASVGIE  102 (121)
Q Consensus        87 ------~wi~~v~~~~~wi~~~  102 (121)
                            ..|+++..|.+||...
T Consensus       195 ~~~~~p~vft~v~~~~~WI~~~  216 (218)
T d2z7fe1         195 ASGLYPDAFAPVAQFVNWIDSI  216 (218)
T ss_dssp             TCSSSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCcCEEEEEhHHhHHHHHHH
Confidence                  2788888888888643

>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Myeloblastin, PR3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.3e-08  Score=66.32  Aligned_cols=77  Identities=23%  Similarity=0.409  Sum_probs=52.4

Q ss_pred             CCccccccceEEEeccChhhhcccccCCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCC-Ccc
Q psy1243           9 SASNALTLKAARVGTLSQESCRKEDAYGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSR-ACY   87 (121)
Q Consensus         9 ~g~~~~~L~~~~l~~~~~~~C~~~~~~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~-~~~   87 (121)
                      .+.....|++..+.+.+...|..           ..|......+.+.|.||+||||+++      +...|++|++. .|.
T Consensus       136 ~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~c~gd~G~pl~~~------~~l~Gi~s~~~~gc~  198 (221)
T d1fuja_         136 HDPPAQVLQELNVTVVTFFCRPH-----------NICTFVPRRKAGICFGDSGGPLICD------GIIQGIDSFVIWGCA  198 (221)
T ss_dssp             SSCBCSBCEEEEEEEECTTCCTT-----------EEEEECSSSSCBCCTTCTTCEEEET------TEEEEEEEECSSSTT
T ss_pred             ccccCccceeeeeeeeeeccccc-----------cceeccccCCCceeCCccCCCEEEe------CEEEEEEEEEECCCC
Confidence            34455677777777765433322           2333334677899999999999984      46788888764 332


Q ss_pred             ------eeeeccccceeccee
Q psy1243          88 ------VLSKMIRFYASVGIE  102 (121)
Q Consensus        88 ------wi~~v~~~~~wi~~~  102 (121)
                            +|+++..|.+||...
T Consensus       199 ~~~~p~vyt~v~~~~~WI~~~  219 (221)
T d1fuja_         199 TRLFPDFFTRVALYVDWIRST  219 (221)
T ss_dssp             CSSSCEEEEEGGGGHHHHHHH
T ss_pred             CCCCCeEEEEHHHhHHHHHHH
Confidence                  788888888888754

>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Achromobacter protease
species: Achromobacter lyticus, strain m497-1 [TaxId: 224]

Probab=98.48  E-value=2.1e-08  Score=68.82  Aligned_cols=64  Identities=19%  Similarity=0.251  Sum_probs=43.2

Q ss_pred             CCCCcCCCeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeC-CCc--------ceeeeccccceecceec
Q psy1243          35 YGTRIKDSMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLS-RAC--------YVLSKMIRFYASVGIEA  103 (121)
Q Consensus        35 ~~~~~~~~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~-~~~--------~wi~~v~~~~~wi~~~~  103 (121)
                      +...+...++|++......+.|.|||||||+++.     ..+.|+++++ .+|        ++|+++..|..||...+
T Consensus       169 ~~~~~~~~~~c~~~~~~~~~~c~GDSGGPL~~~~-----g~~vGvvsgg~s~c~~c~~~~p~vYtrV~~~~~~~~~~~  241 (263)
T d1arba_         169 WGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPE-----KRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAA  241 (263)
T ss_dssp             TTSSSCSSEEEEECCTTSCCCCTTCTTCEEECTT-----SCEEEEEEECSCCTTCCGGGSEEEEEEHHHHHHTTSSGG
T ss_pred             cCCCCCccEEEEEecCCCccccCCCCcceEEecC-----CCEEEEEEEEEeCCcCCCCCCCceEEEEEEeeccCCcch
Confidence            4455778899998766777899999999999642     1245555544 232        27777777665655444

>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamyl endopeptidase
species: Bacillus intermedius [TaxId: 1400]

Probab=97.17  E-value=3.8e-05  Score=49.97  Aligned_cols=45  Identities=13%  Similarity=0.228  Sum_probs=32.5

Q ss_pred             CCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc-------eeeeccccceecce
Q psy1243          52 GADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY-------VLSKMIRFYASVGI  101 (121)
Q Consensus        52 ~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~-------wi~~v~~~~~wi~~  101 (121)
                      ..+.|.|||||||+.     ..+...|+.+.+..+.       .+.++..|.+||..
T Consensus       163 ~~~~~~G~SGgPl~~-----~~~~lvGi~s~g~~~~~~~~~~~i~~~v~~~i~wi~~  214 (215)
T d1p3ca_         163 TIDTFSGNSGSAMLD-----QNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYAKA  214 (215)
T ss_dssp             CCCCCTTCTTCEEEC-----TTSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHHHT
T ss_pred             ecccCCCCccCeEEC-----CCCEEEEEEEeccCCCCCCCCeEEEeEHHHHHHHHHc
Confidence            357899999999994     2346788876654442       56777788899864

>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Glutamic acid-specific protease
species: Streptomyces griseus [TaxId: 1911]

Probab=97.16  E-value=0.00018  Score=45.51  Aligned_cols=51  Identities=22%  Similarity=0.246  Sum_probs=34.4

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcc------eeeecccccee
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACY------VLSKMIRFYAS   98 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~------wi~~v~~~~~w   98 (121)
                      ...|..........|.|||||||++.      ....|+++.+..+.      +|+.+..+..+
T Consensus       125 ~~~~~~~~~~~~~~~~GDSGgPl~~~------~~~vGi~s~g~~~~~~~~~~~~~pv~~~l~~  181 (187)
T d1hpga_         125 DGPVYNMVRTTACSAGGDSGGAHFAG------SVALGIHSGSSGCSGTAGSAIHQPVTEALSA  181 (187)
T ss_dssp             TEEEEEEEEECCCCCTTCTTCEEEET------TEEEEEEEEESCCBTTBCCCEEEEHHHHHHH
T ss_pred             CccEeccEEcCcccccCCCCCeEEEC------CEEEEEEEEEecCCCCCCCEEEEEHHHHHHH
Confidence            34444433456789999999999973      24688888876553      66766655544

>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: (alpha,gamma)-chymotrypsin(ogen)
species: Red fire ant (Solenopsis invicta) [TaxId: 13686]

Probab=88.04  E-value=0.095  Score=33.03  Aligned_cols=31  Identities=19%  Similarity=0.134  Sum_probs=25.4

Q ss_pred             EEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          64 IVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        64 Lv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      ++..+.+|....+.+|++++.|.+||+++++
T Consensus       191 I~s~~~~c~~~~p~vyt~v~~y~~WI~~~i~  221 (222)
T d1eq9a_         191 IVSFGSPCALGEPDVYTRVSSFVSWINANLK  221 (222)
T ss_dssp             EEEECSTTTSSSCEEEEEGGGGHHHHHHTSC
T ss_pred             EEEECCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence            4556678877777888999999999998875

>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Prokaryotic proteases
domain: Protease A
species: Streptomyces griseus, strain k1 [TaxId: 1911]

Probab=84.67  E-value=0.24  Score=30.73  Aligned_cols=40  Identities=18%  Similarity=0.230  Sum_probs=24.6

Q ss_pred             CCccCCCcceEEEeeCCcccCceeEEEEeCCCc------ceeeeccccceec
Q psy1243          54 DSCQGDSGGPIVCDIQGCDKGASLGTDRLSRAC------YVLSKMIRFYASV   99 (121)
Q Consensus        54 ~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~------~wi~~v~~~~~wi   99 (121)
                      ....|||||||+..+      ...|+++.+..+      .+|+.+..+.++.
T Consensus       131 ~~~~GdSGGPv~~~~------~~vGi~sgg~~~~~~~~~~~~~pv~~~l~~~  176 (181)
T d2sgaa_         131 CAQPGDSGGSLFAGS------TALGLTSGGSGNCRTGGTTFYQPVTEALSAY  176 (181)
T ss_dssp             CCCTTCTTCEEEETT------EEEEEEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred             eccCCCcCCeeEECC------EEEEEEEEecCCCCCCceEEEEEHHHHHHHh
Confidence            345799999999631      246776654321      3677666655543

>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: beta-Tryptase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.00  E-value=0.27  Score=31.40  Aligned_cols=29  Identities=10%  Similarity=0.038  Sum_probs=22.0

Q ss_pred             EeeCCccc-CceeEEEEeCCCcceeeeccc
Q psy1243          66 CDIQGCDK-GASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        66 ~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      ..+.+|.. ..+.+|++++.|.+||+++++
T Consensus       213 s~~~~~~~~~~p~v~t~v~~y~~WI~~~i~  242 (243)
T d2fpza1         213 SWGEGCAQPNRPGIYTRVTYYLDWIHHYVP  242 (243)
T ss_dssp             EECSSSSBTTBCEEEEEGGGGHHHHTTTSC
T ss_pred             EECCCCCCCCCCEEEEEHHHHHHHHHHHhC
Confidence            33456654 456778999999999999875

>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Hepatocyte growth factor, HGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.87  E-value=0.16  Score=32.56  Aligned_cols=52  Identities=23%  Similarity=0.286  Sum_probs=32.6

Q ss_pred             eEEEeecCCCCCCccCCCcceEE----EeeCCccc-CceeEEEEeCCCcceeeeccccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGGPIV----CDIQGCDK-GASLGTDRLSRACYVLSKMIRFY   96 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGgPLv----~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~~~   96 (121)
                      ..|.|. .++.-.|.++ +...+    ..+..|.. ..+.+|++++.|.+||+++++.+
T Consensus       173 ~~c~gd-sG~pl~~~~~-~~~~l~Gi~s~g~~c~~~~~p~vyt~i~~~~~WI~~~i~~~  229 (234)
T d1si5h_         173 GPCEGD-YGGPLVCEQH-KMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTY  229 (234)
T ss_dssp             BCCTTC-TTCEEEEECS-SSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred             CCCcCc-cccceEEecC-CeEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHhhcC
Confidence            456552 3333445433 33332    34567765 45677899999999999998643

>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Coagulation factor IXa, protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.64  E-value=0.23  Score=31.39  Aligned_cols=30  Identities=13%  Similarity=0.076  Sum_probs=23.0

Q ss_pred             EeeCCccc-CceeEEEEeCCCcceeeecccc
Q psy1243          66 CDIQGCDK-GASLGTDRLSRACYVLSKMIRF   95 (121)
Q Consensus        66 ~~~~~~~~-~~~~g~~~v~~~~~wi~~v~~~   95 (121)
                      ..+..|.. ..+.+|++++.|.+||.++++.
T Consensus       204 s~g~~~~~~~~p~vyt~v~~~~~WI~~~~~~  234 (235)
T d1rfna_         204 SWGEECAMKGKYGIYTKVSRYVNWIKEKTKL  234 (235)
T ss_dssp             EEESSSSCTTCCEEEEEGGGTHHHHHHHHCC
T ss_pred             EeCCCCCCCCCCEEEEEHHHHHHHHHHHhcC
Confidence            44566655 4467789999999999998864

>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Duodenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.84  E-value=0.25  Score=31.15  Aligned_cols=50  Identities=20%  Similarity=0.174  Sum_probs=30.6

Q ss_pred             CeEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          42 SMFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        42 ~~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      ...|.+. .++.-.|.+..= .++..+.+|. ..+.+|++++.|.+||+++++
T Consensus       175 ~~~c~~d-sGgpl~~~~~l~-Gi~s~g~~~~-~~p~vft~V~~y~~WI~~~ik  224 (224)
T d1eufa_         175 KNSFSGD-SGGPLVCNGVAQ-GIVSYGRNDG-TTPDVYTRISSFLSWIHSTMR  224 (224)
T ss_dssp             CBCCTTC-TTCEEEETTEEE-EEEEECCTTC-CSCEEEEEGGGTHHHHHHHTC
T ss_pred             cccccCC-CCCeEEEcCEEE-EEEEEcCCCC-CCCeEEEEHHHHHHHHHHHhC
Confidence            3456552 333334543221 2345556665 457788999999999998875

>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Trypsin-like serine proteases
superfamily: Trypsin-like serine proteases
family: Eukaryotic proteases
domain: Cathepsin G
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.95  E-value=0.27  Score=30.93  Aligned_cols=49  Identities=18%  Similarity=0.122  Sum_probs=29.7

Q ss_pred             eEEEeecCCCCCCccCCCcceEEEeeCCcccCceeEEEEeCCCcceeeeccc
Q psy1243          43 MFCAGSFQGGADSCQGDSGGPIVCDIQGCDKGASLGTDRLSRACYVLSKMIR   94 (121)
Q Consensus        43 ~~Cag~~~~~~~~C~gDsGgPLv~~~~~~~~~~~~g~~~v~~~~~wi~~v~~   94 (121)
                      ..|.|. .++.-.|.+.. -.++..+..|... +.+|++++.|.+||+++++
T Consensus       175 ~~c~gd-sGgPl~~~~~l-~Gi~S~g~~~~~~-p~vyt~v~~y~~WI~~~i~  223 (224)
T d1t32a1         175 AAFKGD-SGGPLLCNNVA-HGIVSYGKSSGVP-PEVFTRVSSFLPWIRTTMR  223 (224)
T ss_dssp             BCCTTC-TTCEEEETTEE-EEEEEECCTTCCS-CEEEEEGGGSHHHHHHHHC
T ss_pred             cccccC-cCCeEEEcCEE-EEEEEEcCCCCCC-CcEEEEHHHhHHHHHHHHc
Confidence            456552 33334454321 1234445566543 6678999999999998875